mRNA_P-littoralis_Contig155.72.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.020e-44 Identity = 106/184 (57.61%), Postives = 128/184 (69.57%), Query Frame = 3
Query: 471 AQEAEAVVPSGEATQTPR*ARGDATSSSSASPAAA--VRRAALIEKELRLYMAEDAQPEETKFSLLEFWKLR---RT---------GMPFLALIARLCNGVEFTSCQAERHFSALAFLIGHLRSSTAPAKVERLMFLHLNRLFIPEIKALHDAFEAKKAAADRCKERVGQVEAAAAGSTIDLRL 980
A + + V+ E + R A+ A S+ A+PAA RR A++E+ELR+Y+AED EE FSLLEFW+ R RT G+P LALIARL +G+E TSCQAER+FSALAFLIG LRSS P KVERLMFL LNRL+IPE+KALHDA EA KAAA RC+E+V QVEA AAG + L L
Sbjct: 324 APKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVAQVEAEAAGDAVVLTL 507
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 175 bits (444), Expect = 3.860e-43 Identity = 106/184 (57.61%), Postives = 128/184 (69.57%), Query Frame = 3
Query: 471 AQEAEAVVPSGEATQTPR*ARGDATSSSSASPAAA--VRRAALIEKELRLYMAEDAQPEETKFSLLEFWKLR---RT---------GMPFLALIARLCNGVEFTSCQAERHFSALAFLIGHLRSSTAPAKVERLMFLHLNRLFIPEIKALHDAFEAKKAAADRCKERVGQVEAAAAGSTIDLRL 980
A + + V+ E + R A+ A S+ A+PAA RR A++E+ELR+Y+AED EE FSLLEFW+ R RT G+P LALIARL +G+E TSCQAER+FSALAFLIG LRSS P KVERLMFL LNRL+IPE+KALHDA EA KAAA RC+E+V QVEA AAG + L L
Sbjct: 652 APKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQRRSKPRTCAETGEVEPGLPHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEVKALHDAVEANKAAAARCQEKVAQVEAEAAGDAVVLTL 835
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 101 bits (252), Expect = 2.100e-20 Identity = 70/189 (37.04%), Postives = 102/189 (53.97%), Query Frame = 3
Query: 456 IEPACAQEAEAVVPSGEATQTPR*ARGDATSSSSASPAAAVRRAALIEKELRLYMAEDAQPEETKFSLLEFWKLRRTG--------------MPFLALIARLCNGVEFTSCQAERHFSALAFLIGHLRSSTAPAKVERLMFLHLNRLFIPEIKALHDAFEAKKAAADRCKERVGQVEAAAAGSTIDLRL 980
+EPA ++ + + A + + G A+ S A +A RR LIE+E+ +Y+AE Q E F++L FW R T MP+LA IARL G+E +SCQAER+FSAL+ LIGHLR + KVER+M + LNR + E++ L A +A A + ++ + A +IDL L
Sbjct: 82 VEPASKRKKLSRLEERRAARVAAASDGGASGSVQAQGSATNRRV-LIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQEERANKSIDLSL 269
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 103 bits (257), Expect = 1.590e-19 Identity = 69/190 (36.32%), Postives = 101/190 (53.16%), Query Frame = 3
Query: 453 RIEPACAQEAEAVVPSGEATQTPR*ARGDATSSSSASPAAAVRRAALIEKELRLYMAEDAQPEETKFSLLEFWKLRRTG--------------MPFLALIARLCNGVEFTSCQAERHFSALAFLIGHLRSSTAPAKVERLMFLHLNRLFIPEIKALHDAFEAKKAAADRCKERVGQVEAAAAGSTIDLRL 980
R+EPA ++ + + A + G + S + + R LIE+E+ +Y+AE+ Q + F++L +W R T MP+LA IARL G+E TSCQAER+FSALA LIG LR + P+KVER+MF+ LNR + E++ L A KAA + + + A T+DL L
Sbjct: 462 RVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDLCL 651
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 102 bits (255), Expect = 3.760e-19 Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 3
Query: 534 GDATSSSSASPAAAVRRAALIEKELRLYMAEDAQPEETKFSLLEFWKLRRTG--------------MPFLALIARLCNGVEFTSCQAERHFSALAFLIGHLRSSTAPAKVERLMFLHLNRLFIPEIKALHDAFEAKKAAADRCKERVGQVEAAAAGSTIDLRL 980
GD T S + RR LIE+E+ +Y+AE+ Q + F++L +W R T MP+LA IARL G+E TSCQAER+FSALA LIG LR + P+KVER+MF+ LNR + E++ L A KAA + + + A T+DL L
Sbjct: 685 GDETGSLEDQSPSTTRRV-LIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAAKTKVAQSSMAAQEERANQTVDLCL 846
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 101 bits (252), Expect = 8.660e-19 Identity = 70/189 (37.04%), Postives = 102/189 (53.97%), Query Frame = 3
Query: 456 IEPACAQEAEAVVPSGEATQTPR*ARGDATSSSSASPAAAVRRAALIEKELRLYMAEDAQPEETKFSLLEFWKLRRTG--------------MPFLALIARLCNGVEFTSCQAERHFSALAFLIGHLRSSTAPAKVERLMFLHLNRLFIPEIKALHDAFEAKKAAADRCKERVGQVEAAAAGSTIDLRL 980
+EPA ++ + + A + + G A+ S A +A RR LIE+E+ +Y+AE Q E F++L FW R T MP+LA IARL G+E +SCQAER+FSAL+ LIGHLR + KVER+M + LNR + E++ L A +A A + ++ + A +IDL L
Sbjct: 647 VEPASKRKKLSRLEERRAARVAAASDGGASGSVQAQGSATNRRV-LIEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQEERANKSIDLSL 834
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 4.350e-18 Identity = 61/144 (42.36%), Postives = 81/144 (56.25%), Query Frame = 3
Query: 591 LIEKELRLYMAEDAQPEETKFSLLEFWKLRRTG--------------MPFLALIARLCNGVEFTSCQAERHFSALAFLIGHLRSSTAPAKVERLMFLHLNRLFIPEIKALHDAFEAKKAAADRCKERVGQVEAAAAGSTIDLRL 980
LIE+E+ +Y+AE Q + F+L+ FW R T MP+LA IARL G+E TSCQAER+FSALA LIG LR + KVER+M + LNR + E++AL A +A A + G +A + IDL L
Sbjct: 386 LIEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLAEVRALDAAVAQARAMAAKSARESGIAQADRSNKEIDLTL 529
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 2.570e-17 Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 3
Query: 582 RAALIEKELRLYMAEDAQPEETKFSLLEFWKLRRTG--------------MPFLALIARLCNGVEFTSCQAERHFSALAFLIGHLRSSTAPAKVERLMFLHLNRLFIPEIKALHDAFEAKKAAADRCKERVGQVEAAAAGSTIDLRL 980
R LIE+E+ +Y+AE Q + F+L+ FW R T MP+LA IARL G+E TSCQAER+FSALA LIG+LR + P +VER+M + LNR + E++A A + A + + + A ID+ L
Sbjct: 397 RRVLIEREMLVYLAEQPQLDVDGFNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVRAFDAAVSRAREMATKNAAKSAAAQEERANKPIDISL 543
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 5.810e-16 Identity = 60/152 (39.47%), Postives = 82/152 (53.95%), Query Frame = 3
Query: 567 AAAVRRAALIEKELRLYMAEDAQPEETKFSLLEFWKLRRTG--------------MPFLALIARLCNGVEFTSCQAERHFSALAFLIGHLRSSTAPAKVERLMFLHLNRLFIPEIKALHDAFEAKKAAADRCKERVGQVEAAAAGSTIDLRL 980
AA R LIE+E+ +Y+AE Q + F+LL FW R T MP+LA IARL G+E TSCQAER+FSALA LIG L + +VER+M + LN+ + E++A A +A A E+ + A + ID+ L
Sbjct: 496 AAGTGRRVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRAYDAAVAWARAMAANSAEKSAVAQEERANTAIDVSL 647
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Match: A0A6H5L7P7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P7_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 1.000e-14 Identity = 50/108 (46.30%), Postives = 63/108 (58.33%), Query Frame = 3
Query: 567 AAAVRRAALIEKELRLYMAEDAQPEETKFSLLEFWKLRRTG--------------MPFLALIARLCNGVEFTSCQAERHFSALAFLIGHLRSSTAPAKVERLMFLHLN 848
AA R LIE+E+ +Y+AE Q + F+LL FW R T MP+LA IARL G+E TSCQAER+FSALA LIG R + +VER+M + LN
Sbjct: 113 AAGTGRRVLIEREMLVYLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDFRCNMLSHRVERMMLVRLN 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig155.72.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig155.72.1 >prot_P-littoralis_Contig155.72.1 ID=prot_P-littoralis_Contig155.72.1|Name=mRNA_P-littoralis_Contig155.72.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=180bp MAEDAQPEETKFSLLEFWKLRRTGMPFLALIARLCNGVEFTSCQAERHFSback to top mRNA from alignment at P-littoralis_Contig155:362552..364312+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig155.72.1 ID=mRNA_P-littoralis_Contig155.72.1|Name=mRNA_P-littoralis_Contig155.72.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1761bp|location=Sequence derived from alignment at P-littoralis_Contig155:362552..364312+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig155:362552..364312+ >mRNA_P-littoralis_Contig155.72.1 ID=mRNA_P-littoralis_Contig155.72.1|Name=mRNA_P-littoralis_Contig155.72.1|organism=Pylaiella littoralis U1_48|type=CDS|length=540bp|location=Sequence derived from alignment at P-littoralis_Contig155:362552..364312+ (Pylaiella littoralis U1_48)back to top |