mRNA_P-littoralis_Contig153.67.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig153.67.3
Unique NamemRNA_P-littoralis_Contig153.67.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Match: A0A6H5L1F6_9PHAE (Flavin_Reduct domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F6_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 1.540e-130
Identity = 199/276 (72.10%), Postives = 224/276 (81.16%), Query Frame = 1 
Query:  172 GWVLAGCGACVGLGYLASSLLSRSRTFGSAATGSDFPDVVETERPHPEWKPPQRQPPPEGSEKDHVQVDPSDLKSCYPLMISAVVPRPIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSICRNGNGSKKDSLVNIEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPPRVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGAGEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPRPRVQK 999
            GWV+ GCG  +G+GYL SS  SR +T   +   +           HP W P  +QPPP G +  HV++DP DLKSCY LMIS+VVPRPIALTST APDGTVN APFSYFNTVGHDPPTLAVS+CRNGNGSKKD+LVN+ A+GEFVVSIMSDWFVE+ANH+CG+FPPEVDEM V+GLTP  S +V PPR+KESAVNMECKV+HTYDIVN KG+VTTTVVFGEVVMFHV  HLL ENGAGEGKPTV  +G MP+SRLGGNTY RLGSVFDI RPRV K
Sbjct:   19 GWVVLGCGVGMGVGYLLSSRRSRRKTLDRSNLST-----------HPSWIPGDKQPPPGGEDTGHVRIDPRDLKSCYSLMISSVVPRPIALTSTLAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDVTTTVVFGEVVMFHVFTHLLKENGAGEGKPTVNHEGLMPMSRLGGNTYGRLGSVFDISRPRVGK 283
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BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Match: D7G8R2_ECTSI (Flavin_Reduct domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R2_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 4.460e-106
Identity = 162/193 (83.94%), Postives = 175/193 (90.67%), Query Frame = 1 
Query:  421 VVPRPIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSICRNGNGSKKDSLVNIEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPPRVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGAGEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPRPRVQK 999
            VVPRPIALTST APDGTVN APFSYFNTVGHDPPTLAVS+CRNGNGSKKD+LVN+ A+GEFVVSIMSDWFVE+ANH+CG+ PPEVDEM V+GLTP  S +V PPR+KESAVNMECKV+HTYDIVN KG+VTTTVVFGEVVMFHV  HLL ENGAGEGKPTV  +G MPISRLGGNTY RLGSVFDIPRPRV K
Sbjct:   49 VVPRPIALTSTLAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVSIMSDWFVEAANHTCGSLPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDVTTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGLMPISRLGGNTYGRLGSVFDIPRPRVGK 241
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BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Match: A0A835ZDF3_9STRA (Flavin_Reduct domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF3_9STRA)

HSP 1 Score: 270 bits (689), Expect = 1.720e-80
Identity = 147/261 (56.32%), Postives = 177/261 (67.82%), Query Frame = 1 
Query:  205 GLGYLASSLLSRSRTFGSAATGSDFPDVVETERPHPEWKPPQRQPPPEGSEKDHVQVDPSDLKSCYPLMISAVVPRPIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSICRNGNGSKKDSLVNIEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPPRVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGAGEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPRP 987
            G G + ++LL R R    AA  S    V  T  PHPEW+P Q QP P G + + V +DP+ L SCY L+IS+ VPRPIA  S+   +G  N+APFSYFN V HDPP +A+ ICR   G KKDSL NIEA GEFVVSIMSDWF+ESANH CG F  +VDEMA+SGLT A + +V PP V ESA+NMECK+ H Y++ N  G  TTTVV G+VVMFHVL  +L     G  KPTV      PI+RLGGNTY  + +VFD+PRP
Sbjct:    8 GFGLVGTTLLRRLRAPVPAALLSQ---VTTTTTPHPEWQPGQNQPHPYG-DSERVALDPAALASCYGLVISSGVPRPIAFVSSLDSEGRRNLAPFSYFNFVAHDPPLVAIGICRK-RGEKKDSLANIEARGEFVVSIMSDWFIESANHCCGDFSSDVDEMALSGLTAARAKIVEPPLVAESAINMECKLVHKYEVKNAAGTDTTTVVIGQVVMFHVLEAVLDTVTHGPTKPTVHFDKLRPIARLGGNTYGIVNTVFDLPRP 263
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BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Match: L1IE62_GUITC (Flavin_Reduct domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IE62_GUITC)

HSP 1 Score: 267 bits (683), Expect = 1.080e-79
Identity = 134/233 (57.51%), Postives = 166/233 (71.24%), Query Frame = 1 
Query:  286 VVETERPHPEWKPPQRQPPPEGSEKDHVQVDPSDLKSCYPLMISAVVPRPIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSICRNGNGSKKDSLVNIEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPPRVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGAGEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPR 984
            VV+   PHP WK  + QP P      HV + PS+LKSCYPL+ISA VPRPIAL S+++  G VNVAP+SY   + HDPP + VS CR      KD+L NI    EFVV+IMS+W+ ESANH+CG FPPEV+EM V+GLTP PS +++PPRV ESA+N EC++ H YD+ N +G+VTTTVV GE+V FHV   +L  NGAGEGKPTV      P+SRLGG TY R  +VFD+PR
Sbjct:   28 VVKESPPHPSWKAGENQPIPYPGR--HVTLLPSELKSCYPLIISAYVPRPIALVSSKSAAGHVNVAPYSYTGAISHDPPAIVVSCCRKAGDVMKDTLANILDTKEFVVNIMSEWYAESANHTCGNFPPEVNEMDVAGLTPLPSKIISPPRVAESALNFECRLIHQYDMKNAQGKVTTTVVIGEIVAFHVHEGVLEMNGAGEGKPTVNFDALKPLSRLGGCTYGRTTAVFDLPR 258
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BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Match: A0A7S0L4A2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L4A2_9EUKA)

HSP 1 Score: 261 bits (666), Expect = 3.220e-77
Identity = 140/252 (55.56%), Postives = 171/252 (67.86%), Query Frame = 1 
Query:  238 RSRTFGSAATGSDFPDVVETERPHPEWKPPQRQPPPEGSEKDHVQVDPSDLKSCYPLMISAVVPRPIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSICRNGNGS--KKDSLVNIEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPPRVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGAGEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPRP 987
            R+R  G  A+ +    V  T  PH  WKP ++QP P   E   V++ PSDLKSCYPLMISA VPRPIA  ST +  G  N+APFSY   V HDPPT+AVSICRNG  +  KKD+L NI+  GEFVV IMS+WFVE+ANH+CG+F   VDE   SGLT  PS +V PPRV ESAV+ ECK+   ++I+NK G  T TVVFGEVV       +  ENGAGEGKPT++   +  ++RLGGNTY R+ S FD+ RP
Sbjct:   10 RARVEGDVASPTT---VAVTAPPHEGWKPGEKQPLP--FEGGFVELIPSDLKSCYPLMISAYVPRPIAFVSTVSASGKGNLAPFSYSGCVAHDPPTIAVSICRNGRAADGKKDTLANIDDTGEFVVCIMSEWFVEAANHTCGSFERGVDEFDESGLTRLPSSIVKPPRVGESAVHFECKLSQRHEIINKAGVTTATVVFGEVVKVWAAKGVCDENGAGEGKPTIKFDNYRALARLGGNTYGRVTSTFDLDRP 256
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BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Match: A0A7S4C094_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C094_CHRCT)

HSP 1 Score: 257 bits (656), Expect = 1.370e-75
Identity = 131/229 (57.21%), Postives = 162/229 (70.74%), Query Frame = 1 
Query:  304 PHPEWKPPQRQPPPEGSEKDHVQVDPSDLKSCYPLMISAVVPRPIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSICRNGNGS-KKDSLVNIEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPPRVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGAGEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPRP 987
            PHP W P ++QP P  + KD V +DP +LKSCYPL+IS+ VPRPIA  ST +  G  N+APFSY   V HDPPT+ V ICR  N   KKD+L NI+A GEFVV IMS+WFVE+ANH C AF   VDE   SGLT  PS  V PPRV ESA++ EC ++H +++VN  G VT+T+V GEVVM H    + + +GAGEGKPT++   F PISRLGG+TY R  S+FD+PRP
Sbjct:   42 PHPRWNPGEKQPLPFQT-KDFVALDPKELKSCYPLVISSYVPRPIAFVSTLSASGEGNLAPFSYSGVVAHDPPTIVVGICRGRNADGKKDTLANIDATGEFVVCIMSEWFVEAANHCCSAFERGVDEFDQSGLTRVPSTRVKPPRVGESAMHYECVLRHRHEVVNASGVVTSTMVVGEVVMMHAASAVCNVDGAGEGKPTIDFAKFQPISRLGGDTYGRTLSMFDLPRP 269
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BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Match: A0A8J6C7I8_DIALT (Flavin_Reduct domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C7I8_DIALT)

HSP 1 Score: 252 bits (643), Expect = 1.090e-73
Identity = 138/272 (50.74%), Postives = 172/272 (63.24%), Query Frame = 1 
Query:  184 AGCGACVGLGYLASSLLSRS--RTFGSAATGSDFPDVVETERPHPEWKPPQRQPPPEGSEKDHVQVDPSDLKSCYPLMISAVVPRPIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSICRNGNG--SKKDSLVNIEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPPRVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGAGEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPRP 987
            AGCGAC+    LA+   +R+  R   SA              PHP W PPQ  PPP  ++  HV +DP+ L SCYPLMISA VPRPIA  ST++     N+APFSY     HDPPT+  S+  N      KKD+L NI+ +GEFVV +MS+W+VE+ANH CGAFP   DE  +SGLT  PSL V PPRV E+AV  ECK+ H +++ N KGEV+ T++ GEVVM H+   +   +GAG GKPTV      P+SRLGGNTY R  S FD+PRP
Sbjct:   14 AGCGACLLWRRLAARRAARAPARALASAP-------------PHPLWAPPQPMPPP-FADASHVSLDPTALASCYPLMISAFVPRPIAFVSTRSDKYGGNLAPFSYAGLFNHDPPTVGFSVVSNARAPDGKKDTLANIDESGEFVVHVMSEWYVEAANHCCGAFPRGEDEFDLSGLTRVPSLKVGPPRVGEAAVAFECKLAHRHEMRNAKGEVSATLILGEVVMIHLAAGVCELDGAGAGKPTVRFDALQPMSRLGGNTYGRTTSTFDLPRP 271
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BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Match: C1N2T0_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N2T0_MICPC)

HSP 1 Score: 242 bits (617), Expect = 7.080e-71
Identity = 117/207 (56.52%), Postives = 146/207 (70.53%), Query Frame = 1 
Query:  367 VQVDPSDLKSCYPLMISAVVPRPIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSICRNGNGSKKDSLVNIEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPPRVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGAGEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPRP 987
            +  DP DLKSCYPLMISAVVPRPIA  S+ + DG  N++PFSY   + HDPP +  S CR   G+KKD+  NIEA  EFVV +MS+WFV +ANH+CG F  E DE  +SGLT  PS  V PPRVKESA +MECK++H+YD+ N  G VT T + GEVVMFH+  H    N   EGKP V++  + P+ RLGG+TY R+GS +D+PRP
Sbjct:    2 LPFDPKDLKSCYPLMISAVVPRPIAFVSSLSADGVGNLSPFSYATVISHDPPCVMFSACRKPGGAKKDTWANIEATKEFVVCVMSEWFVNAANHTCGNFDAEDDEFDLSGLTRVPSAKVKPPRVKESAFHMECKLRHSYDVTNADGVVTATAIVGEVVMFHI--HEAVANVEWEGKPRVDMARYAPVCRLGGDTYGRVGSGYDLPRP 206
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BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Match: A0A061SEF3_9CHLO (Flavo protein oxygenase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SEF3_9CHLO)

HSP 1 Score: 236 bits (603), Expect = 5.870e-68
Identity = 121/232 (52.16%), Postives = 162/232 (69.83%), Query Frame = 1 
Query:  304 PHPEWKPPQRQPPPEGSEKDHVQVDPSDLKSC--YPLMISAVVPRPIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSICRNGNGS--KKDSLVNIEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPPRVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGAGEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPRP 987
            PHP+WK  + QPPP   E + + +DPS+L     YPL+ISAVVPRPIA   T +  G  N+APFSYF  + HDPP + + ICR+ + +  KKD+L NI A  EF +++MS+WFVESANH+CG F  +VDE++++GLTP PSL V PPRVKES+V++ECK+ HTY++ N+ G VT T+V G VVMFHV   +  +  +G     V+ Q + P+SRLGGNTY R    FD+PRP
Sbjct:   45 PHPDWKVGENQPPPFSGE-EMMALDPSELGGARAYPLVISAVVPRPIAFVCTLSAAGVRNLAPFSYFGAMSHDPPHVCIGICRSRSKATGKKDTLANILATKEFTLNMMSEWFVESANHTCGEFDDDVDELSLAGLTPLPSLKVAPPRVKESSVHLECKLVHTYEVRNEYGVVTATIVIGRVVMFHVHKEVAGKTPSGN--VIVDFQRYKPVSRLGGNTYGRTAGTFDLPRP 273
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BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Match: A0A2P6VCT5_9CHLO (Flavin reductase-FMN-binding domain containing n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VCT5_9CHLO)

HSP 1 Score: 233 bits (594), Expect = 2.380e-66
Identity = 126/232 (54.31%), Postives = 157/232 (67.67%), Query Frame = 1 
Query:  304 PHPEWKPPQRQPPPEGSEKDHVQVDPSDLKS--CYPLMISAVVPRPIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSIC--RNGNGSKKDSLVNIEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPPRVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGAGEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPRP 987
            PHP W PP +QP P  S +    VDPS L S   YPL+ISA+VPRPIA  STQ+  G  N+APFSYFN V H PP + +     R  +  +KD+LVNI   GEFVV+IMS+WFVE+ANH CG F    DEM +SGLTP PS+ V PPRV ESAV+MEC ++H Y++ N  G+VT T+V GEVVM HV  H      +  GK  V+++ + P+SRLGGNTYAR   +FD+PRP
Sbjct:   58 PHPGWHPPLKQPAPFASNEMRA-VDPSQLPSDVLYPLIISAIVPRPIAFVSTQSAAGEGNLAPFSYFNVVAHAPPHVVIGFASSRLRSHGRKDTLVNILETGEFVVNIMSEWFVEAANHCCGNFDYGEDEMQLSGLTPRPSVKVRPPRVAESAVHMECLLRHNYEVKNAAGDVTGTIVIGEVVMMHV--HEGVAGRSPSGKLVVDIEKYKPVSRLGGNTYARTSGLFDLPRP 286
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.67.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1F6_9PHAE1.540e-13072.10Flavin_Reduct domain-containing protein n=1 Tax=Ec... [more]
D7G8R2_ECTSI4.460e-10683.94Flavin_Reduct domain-containing protein n=1 Tax=Ec... [more]
A0A835ZDF3_9STRA1.720e-8056.32Flavin_Reduct domain-containing protein n=1 Tax=Tr... [more]
L1IE62_GUITC1.080e-7957.51Flavin_Reduct domain-containing protein n=2 Tax=Gu... [more]
A0A7S0L4A2_9EUKA3.220e-7755.56Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4C094_CHRCT1.370e-7557.21Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A8J6C7I8_DIALT1.090e-7350.74Flavin_Reduct domain-containing protein n=2 Tax=Di... [more]
C1N2T0_MICPC7.080e-7156.52Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A061SEF3_9CHLO5.870e-6852.16Flavo protein oxygenase n=1 Tax=Tetraselmis sp. GS... [more]
A0A2P6VCT5_9CHLO2.380e-6654.31Flavin reductase-FMN-binding domain containing n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig153contigP-littoralis_Contig153:239733..245652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8R2
PFAMsFlavin_Reduct
Model size2589
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons6
Evalue1.96e-114
EggNOG OGs2CXSN@1|root,2RZGA@2759|Eukaryota
DescriptionFlavin reductase like domain
Cds size870
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig153.67.3prot_P-littoralis_Contig153.67.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig153 241320..245520 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789732.9988675-UTR-P-littoralis_Contig153:239732..2413191680789732.9988675-UTR-P-littoralis_Contig153:239732..241319Pylaiella littoralis U1_48UTRP-littoralis_Contig153 239733..241319 -
1680789733.0701814-UTR-P-littoralis_Contig153:245520..2456521680789733.0701814-UTR-P-littoralis_Contig153:245520..245652Pylaiella littoralis U1_48UTRP-littoralis_Contig153 245521..245652 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789733.009367-CDS-P-littoralis_Contig153:241319..2414871680789733.009367-CDS-P-littoralis_Contig153:241319..241487Pylaiella littoralis U1_48CDSP-littoralis_Contig153 241320..241487 -
1680789733.0204217-CDS-P-littoralis_Contig153:241791..2418571680789733.0204217-CDS-P-littoralis_Contig153:241791..241857Pylaiella littoralis U1_48CDSP-littoralis_Contig153 241792..241857 -
1680789733.0316713-CDS-P-littoralis_Contig153:242251..2424231680789733.0316713-CDS-P-littoralis_Contig153:242251..242423Pylaiella littoralis U1_48CDSP-littoralis_Contig153 242252..242423 -
1680789733.0424273-CDS-P-littoralis_Contig153:242732..2429071680789733.0424273-CDS-P-littoralis_Contig153:242732..242907Pylaiella littoralis U1_48CDSP-littoralis_Contig153 242733..242907 -
1680789733.051709-CDS-P-littoralis_Contig153:243203..2432631680789733.051709-CDS-P-littoralis_Contig153:243203..243263Pylaiella littoralis U1_48CDSP-littoralis_Contig153 243204..243263 -
1680789733.0604208-CDS-P-littoralis_Contig153:245291..2455201680789733.0604208-CDS-P-littoralis_Contig153:245291..245520Pylaiella littoralis U1_48CDSP-littoralis_Contig153 245292..245520 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig153.67.3

>prot_P-littoralis_Contig153.67.3 ID=prot_P-littoralis_Contig153.67.3|Name=mRNA_P-littoralis_Contig153.67.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=290bp
MMAAHRAQLKSRGGWVLAGCGACVGLGYLASSLLSRSRTFGSAATGSDFP
DVVETERPHPEWKPPQRQPPPEGSEKDHVQVDPSDLKSCYPLMISAVVPR
PIALTSTQAPDGTVNVAPFSYFNTVGHDPPTLAVSICRNGNGSKKDSLVN
IEANGEFVVSIMSDWFVESANHSCGAFPPEVDEMAVSGLTPAPSLLVTPP
RVKESAVNMECKVQHTYDIVNKKGEVTTTVVFGEVVMFHVLPHLLSENGA
GEGKPTVEVQGFMPISRLGGNTYARLGSVFDIPRPRVQK*
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mRNA from alignment at P-littoralis_Contig153:239733..245652-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig153.67.3 ID=mRNA_P-littoralis_Contig153.67.3|Name=mRNA_P-littoralis_Contig153.67.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5920bp|location=Sequence derived from alignment at P-littoralis_Contig153:239733..245652- (Pylaiella littoralis U1_48)
TGGGTGTCCGCGGTGGATGCCTTCGTGACAGCTCCTCGCGCATCGCTGAC
ATTGCGAATAACATCCGCAAGGGAGGCTGCAGCAGGAGAATAGAGGAAAT
TTACGACAGCTTTGGTTTTAGCTGCACGGAATATGATGGCGGCGCATCGA
GCTCAGCTGAAAAGTCGAGGAGGATGGGTATTGGCGGGCTGTGGAGCATG
TGTCGGGTTAGGGTATCTGGCTTCTTCGCTACTCAGCAGGAGCAGAACAT
TTGGAAGTGCGGCAACCGGGTCCGATTTCCCAGACGTCGTTGAGACTGAA
CGACCACATCCGGAGTGGAAGCCCCCGCAGAGGCAACCTCCGCCCGAAGG
CTCAGAGAAAGGTCTGGTATTTTCTGTGTTCGCCACCTGGTACAGCAGTA
CCGGTATGTTTTTGCAAGTACGAGCAATGGCACTACTGCTGTACTACGGT
AGCTGTTGAAACGCTCACGAAACACCTCCATCGGCACTTGTACAACAATT
CCTCTGACAGGCCACACACGGTAGGGTCATCACGTTTCACACCGTGCTTC
CCCGGCTACTACTGCTGGATCGGTTCTATTCTACTCGTCCTGCTGCAGTA
ATATAATACCGACATTCGTATTTGTCCCGCATTTTATTTCACTTTTTCTA
TTAACCCTTTGACCCCCCAGGGGTCTGAAAAAAGTAATCATGGAGCCAAA
AATTAACTGATTTCGGTGCACCGATGACTGGCGAATGGTCGACAGTCTCA
AAAAAAAAAAAAGTACTGATGTCTCGCTGACTCCCTGCTCTCTCCGGGTA
AAAAAAGGGGTGTGACTTGATTATACACAGAAATCTGTCCCCAATTTGCC
CTGAAAAAAATGGGGACAAATTTCAGTCTAAAGCTACAACAAACTTTTTT
GGGGGGGTCAACTACACAAAAGTTGTTTGTTTAGTTTACAGGATGTTGCT
TCAAAGGGATACTGCTGTATGCAAGGTAGCACGCAGCAATACCGCCACTA
CTTAGCATGGCAGATCAGGGTGCCCCGCTCGACAACCACACAGGGTTCCA
CTCCGTAACATTCATTCAGGGTCTACAGCATCTCATCAGCAGCAGCAGCA
AGCAGCAGCTGCACTAGCCTCTGAAGTCAAACATATCATCATGTTCCATG
TGATCAACGCAAGGGTGTCGGCATGTAATGGTACCCATGTGATGATACTC
GTACGAGATCGCCGGGAAAGTATATGAGCTTTCAAACGTGCGTGGCGCGA
TGTGTCTGTTTGTAGTGTCGGCCCCCGTGTGCGTGGTGTGTGCCTCACCA
ACCCACCGCACGACACATCATCAGCTAGCTGCTTGCTGCAGCATGCACAC
AGCAGCAGCAGAAGCAGAGTACAATAATGGTTGCAGAAATCAGGGTATGT
ATGTGAGTGCAGCAGTACGTCAGCATCATCAGCGTTTCATAGGAGCGGTA
CAGTAGTATCAGGTATGACGTAGTCCATGTATCATGTCTTATGTGTATGT
GTGCATGTTGTGTGCAATGCAGCAGGGAGTTGCCGGCATGAAGTAAGTGT
GATACAAGATGATCGCCGTTGTGTCTACTATGCTGTCGGGCGCGCTTGCT
CTCCCATAATAATAATAATCATAATAATAAACTAAATGTGGCACCGAGGC
AGCCAACGATTGGTCGATCCACACACATTCCATCGAGCGCACGGAACCAC
ACCCAAAATACCTGTAGATAGGCGCCTTCAAAACCCAAGTAAAAAAAAAA
ACAGGTGTCCCCAAATTGTCCCCAACTGGGATTGGGGGGTTCAAAGGGTT
AAGAACGTTCCCACAGCAGTGCTGCGCGCTGGATGTTCTCCCAGGGTTTC
AAAAACCAGGCCAAAATCGTCTTTGGGGCTGCTGTACTATGATAGTTTAC
CGGTACAATAACCATGGATGTAGGGTGCAAATAACTTTCAAACTTTCGAC
AAACGTCTGATTATTCTGGGTTTCCAAAGTCTATCTTGAGTACGAATCTG
CCACCACCACCGCAGAATGCTCCCGGAGGCAGTCGCCGTGAGCAATGATT
GTTGTCTTGGATCCCAAGTGCTTGCGACATGCTACAGATTCGGCGTTTGT
GATTTTTGAAGCAAGCTACGAGGCGTAGTCCGGATGCTGCTGTAGCAGCC
ATACTCTGAACGCTCCCGGCAAACAGCATACAAGTACCTACGGCATTCAA
AATCAATCACGGCGATGGCTGGGGTATGTGAAGAGGAGAGAGCGAGCATT
GTCCTGAATCCGACTGCCGTTCATTAATATCCGCCCCCGCGTGGAACAAA
TCCGTCACCCTCGTGCTCCTGCAACCCTTCTCTGGTGGCCCTCTTTCCCA
AACACCACGGTTCATTCGGCATTCGACCTTGCATCATAGATCATGTTCAA
GTGGACCCGAGTGATCTGAAGAGCTGTTATCCGCTCATGATCAGCGCCGG
TGAGTTATGTAAGATATGTGTCCAGCCGTAGATTAAGGGGGTCGTGCTCC
CTTACGCGGCAGCGTGTGTCATTCGTTTCGAGTGTACCGGTTCCGTACGA
TTACCGTACGCCAGTTTGAATGTGCCGTGCCCATTGTAATAACCCTCCTG
CAACAAGCAAGATGTCCGCACCGCGGATCCCATCCAAATCACGACCAGAT
GACAATATTCGGCGATTGCGCAGCTCTAATATTGTCTAGTTTGTACCGCC
TCATCCATTCACTATGTACTGCGATGCCCCCCCTGTCACATCTAGTCGTT
CCAAGGCCCATCGCTTTAACATCTACACAGGCACCCGATGGCACTGTGAA
TGTGGCACCGTTCTCCTACTTCAACACTGTCGGCCATGATCCACCAACGC
TAGCCGTTTCTATATGCCGCAACGGCAATGGCTCGAAGAAGGACAGCTTG
GTAAACATCGAGGCGAACGGGTGCGTGGTGAGGCAGGCTATTTGTAGGGA
CACCGAAGCACGTCCCATCACAAGCACGTCAAGTGGTCAAAGGGCATCAA
AGCTCGCTGCGCGCGTGTCTACTTGATGTCGATGATGTCAGACAGTCGAG
AGTGCTGACTGTTCTTCACGGGCTCACAACTAAACGGGAATCTCGTTACT
ATGAATGGGTGGAGATTTGTGTCCGTGACTGCAACTGTGTCTGGTACTCA
TGAACGGTCGTACTTGATGAGAATCTTTGTCCGACCTCATCGAAATCATC
GCGCCCGTTCGTTCGCCCGACGTTTGCAGCGAATTCGTCGTCTCCATAAT
GAGCGATTGGTTTGTTGAATCTGCGAATCACTCATGCGGTGCTTTCCCTC
CTGAGGTCGATGAGATGGCCGTCTCAGGCCTGACGCCGGCCCCAAGTTTG
CTGGTAACTCCCCCAAGGGTCAAGGAATCAGCCGTCAATATGGAATGCAA
GGTGCTCAGTATTTCAGGGATGAGGGATATTATCTTGTTGCTTCCCAGGT
ACAGTGTAGAATAGACTCACGGAGTCCAATCGAAAATAGAGGCGAATTAT
GGTGGAGTGTACACCAGTCTGCACTTTGTACTCGAAATTTCGAATTTCGA
AAGCGGTAGGAGGTAGAAATACGCATCTGTTATTCTGTCATATAATGTGT
ACTTCGAAACTCATCTCACGCATCAGCCAATTTCATTGCTGAAGCTGGAT
CTTTCACACGTGCTGTATTTTCACATTTACCCTGCTTGTCTTGAATGCAC
GCTCGAATTTCCTGGGGGTGTGGTGCGTTTTTAGTATCGTACTAGCTGCT
TTGTGAAGTTCTCAACATGCGGATGTCATTCTTGCTTCCCTGCAGGTGCA
ACACACCTACGACATTGTCAACAAAAAAGGCGAAGTCACGACGACGGTTG
TATTTGGCGAAGTGAGTACTGGTACCATGCAAGACCTGCGTGCACGTCTA
TCTTTACCGCAACACCCGCAAGCAACCGTTCTCTTGCCTGATACATTTGC
ATATGTAGAAACACCGCAACAAGTGAAGCCCCATGTACCCCCCGCCCCCC
CCACCGTTATGCTGACCCTCAACTTCTGAGTTCGGCCAAAAAAATTGCTT
CATCTCACTCTCATTCGCTACAAACCTCTTGTGTCGTGATTTTCACGACA
AATCGAAATCGATGTGCATGCTCGTGAAGCTGGTGAACTTAATTCCGGCT
TGCCCTCTGAAACAGGTGGTAATGTTCCATGTGCTCCCGCATCTACTGAG
CGAGAATGGTGCCGGCGAGGGCAAACCGACTGTGGAGGTGCAGGGCTTCA
TGCCTATTTCCCGTTTGGGGGGGAACACATATGCGCGGCTGGGCTCCGTG
TTTGACATTCCCCGTCCACGTGTTCAGAAATGAATGATGAATCGACGACA
TTTACCACCTATTGAACTAGGTCACTAGATCCCCGTTGTTTTTTCTTTTT
GTGAGCCCAAGGGCCGTTTGCGTGTTGCGTGGACTCTTCGACGGCAACGT
GCCAATTACGTTGCTGTGGGCCTTTGATGTTCTGTTCCGCAACCACTCAT
CGTGCTTTCGCACACGATCTGATTTTGCGACACCTTCGTGTAGCATGACG
ATCTTTGGGATTGTGAGTATTAGCGAACCCGTAGAGAGTGCGTGTAGCAT
CTGGGAAGGGGATGGGGCAAAATAATACTCCGTACAACGAAGTCGATCGA
TTGTCATACAAATTTTGAAAGTTGATTTTGGAGCGTGTGGTGATCTGGGT
TTGGTGTCCCCTGCGCAAACGTGAGTGAAAGGCCCCTTTTCCGTCACTCT
CTGACTACTGACTTTGCCTGCATGCCTTCATCACTTTCACCGCAAAAGAT
AGACACACAGACATGTAGTGGACAGCACAGAGATATACGCAGATATCTAG
GCCTCCACACGTCGACATGTTTGTACTGATTATAGCTGGCGGTGGGGGTA
CGGGTGGGCAAATGCTGAAGGGAGAAAACATTTTAATAGTATCGACCAAA
AGCGTGTTTTTCTTTACATAGGTGCTTCGAAGTGGTTTGGGCGACGACCG
GTAATAAACGGAAATATTTTGACAAGAGGGAATAGTTTTCGCATCGTCCG
TCTCCCACCAGTGTTCCATTATGTTGCCCGCGATTGCGTGTTTGTTATGT
TGATGAGGATCAGGATTTGTTCAGTATGAGCTTTCGAGAACTGTAAATAA
AGATGGTCAGGTCTATCCGCTATTCTAGCGAAGCCAGCCGATTTTAATTT
GAAACTTTTACCGGATGCTCGTTGCATACGAAATATACTTTCGAGAAGCT
TACATGTCGCGAATGGCATTAAACCACGCGATTTGTATCTGCAGAACTGG
TACTGATTGTAAAGTGGCATTTTTCCCGTCTGAGCGGCACTGAAGAACAT
GGTGTTTCGCGGCTGTTGGGGACTGGCGGGCAGAACTTCACGGCGTTGAC
AAGACGGTATTCGGTTTTTTGGGCAATGGTTCAATCGGCGAGTAATTTTA
ACATGCTGAGAAGGAATGTCACAGCGGGGGGCTGTGAGCGCGAAACTAAT
AATCTGCCACAGCAGTAGTGATAAAACGTTCCGGCATGCTCGTGTCAAAC
TCGCTGTTCGTGCGAAGAGTTACTGCTGTTTCGCTTGTTTGTTTGGGAGC
TGGGTTTGGGAAGCTGACTTGAAACTTACTTGACTAGGGAGAGGACAAGT
TAACGCTTCTCCGAGAGTGAGGACTGCCCGTAAAGTATACCACCGCAAGA
GGAAGTTGATTACAGGTATACTCCTCGAGTTCCCGACTGCACGCCCCCGC
ATGCCACCGAGGCTAAAGGGGAGACAACTTGCATGACAGATGTATGGACA
CTGGTGTAGAGAACATTATGTGGGACGAGAAGATATTGTGATGCCGCTGA
CACTTGAAGGAGCTCTTCGGACGGTAACGCGATATTATTGCAACTCGTAC
GTTCACACAGCAGTACCCAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig153:239733..245652-

>mRNA_P-littoralis_Contig153.67.3 ID=mRNA_P-littoralis_Contig153.67.3|Name=mRNA_P-littoralis_Contig153.67.3|organism=Pylaiella littoralis U1_48|type=CDS|length=870bp|location=Sequence derived from alignment at P-littoralis_Contig153:239733..245652- (Pylaiella littoralis U1_48)
ATGATGGCGGCGCATCGAGCTCAGCTGAAAAGTCGAGGAGGATGGGTATT
GGCGGGCTGTGGAGCATGTGTCGGGTTAGGGTATCTGGCTTCTTCGCTAC
TCAGCAGGAGCAGAACATTTGGAAGTGCGGCAACCGGGTCCGATTTCCCA
GACGTCGTTGAGACTGAACGACCACATCCGGAGTGGAAGCCCCCGCAGAG
GCAACCTCCGCCCGAAGGCTCAGAGAAAGATCATGTTCAAGTGGACCCGA
GTGATCTGAAGAGCTGTTATCCGCTCATGATCAGCGCCGTCGTTCCAAGG
CCCATCGCTTTAACATCTACACAGGCACCCGATGGCACTGTGAATGTGGC
ACCGTTCTCCTACTTCAACACTGTCGGCCATGATCCACCAACGCTAGCCG
TTTCTATATGCCGCAACGGCAATGGCTCGAAGAAGGACAGCTTGGTAAAC
ATCGAGGCGAACGGCGAATTCGTCGTCTCCATAATGAGCGATTGGTTTGT
TGAATCTGCGAATCACTCATGCGGTGCTTTCCCTCCTGAGGTCGATGAGA
TGGCCGTCTCAGGCCTGACGCCGGCCCCAAGTTTGCTGGTAACTCCCCCA
AGGGTCAAGGAATCAGCCGTCAATATGGAATGCAAGGTGCAACACACCTA
CGACATTGTCAACAAAAAAGGCGAAGTCACGACGACGGTTGTATTTGGCG
AAGTGGTAATGTTCCATGTGCTCCCGCATCTACTGAGCGAGAATGGTGCC
GGCGAGGGCAAACCGACTGTGGAGGTGCAGGGCTTCATGCCTATTTCCCG
TTTGGGGGGGAACACATATGCGCGGCTGGGCTCCGTGTTTGACATTCCCC
GTCCACGTGTTCAGAAATGA
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