mRNA_P-littoralis_Contig1529.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1529.2.1
Unique NamemRNA_P-littoralis_Contig1529.2.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Match: UPI0012BCA67E (methionine--tRNA ligase n=1 Tax=Curvivirga aplysinae TaxID=2529852 RepID=UPI0012BCA67E)

HSP 1 Score: 297 bits (761), Expect = 3.560e-92
Identity = 167/371 (45.01%), Postives = 220/371 (59.30%), Query Frame = 3
Query:   45 PHLGHAYTSAMTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKKFYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYL-SYEGWYSIRDEAFYTEAELKR*STNRSRCRVGMRRK------LFLSFITMER*IT*IL**KS*FYCTKRHRNEMLSFMNQEGGLKDLSISRTTFSWGVPVPNHSNHVMYVWLDALTNY*PQ*VIRMLKKRNLNSIGQHPTCGG*GYSKISCDIL--------ACLMAAELPLEAYICTRLVDLRW-----EKMSKSIGNVLDPIELIDRYGSDYVRYYMASEFHFGNDGDFSHESFCHRINVDLANDLGNLAQRVVTWFIAIMTGLYP 1097
            PH+GHAYTS   D++AR+ ++D  NV+FLTGTDEHG KVEQSA KA +   +F   VS+ F D+ K++  SN+DFIRTTE+RH E  Q +W +L   G IYL +Y GWY+IRDEAFYTE EL            G   +       F      E  +  +      F   K  RNE+LSF+  +GGLKDLS+SRTTFSWGVPVPN  +H+MYVWLDALTNY        ++K++                 +  DIL        A LMAA++PL      R+    W     +K+SKS+GNV+DP++LI++YG D  RY++  E  FGNDGDF+HE+   R+N DLAND+GNL QRV++         +P
Sbjct:   20 PHIGHAYTSLACDVLARFKRMDGYNVHFLTGTDEHGQKVEQSAEKAGIDPQKFTDNVSQNFRDLAKAMNFSNDDFIRTTEERHKEACQAIWNKLVETGDIYLGAYAGWYAIRDEAFYTETELVDGPNGNKIAPTGAEVEWLEEPSYFFKLSAWEDKLLELYESNPDFIAPKSRRNEVLSFV--KGGLKDLSVSRTTFSWGVPVPNDDDHIMYVWLDALTNYLTAAGYPDMEKQSFKDFWPA------SLHMVGKDILRFHAVYWPAFLMAADIPLPE----RVFAHGWWTNEGQKISKSLGNVIDPLDLIEKYGLDQTRYFLMREVPFGNDGDFAHEAMVGRMNTDLANDIGNLCQRVMSMIFKNCDAQFP 378          
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Match: A0A1Y5FQD2_9PROT (Methionine--tRNA ligase (Fragment) n=1 Tax=Rhodospirillales bacterium 47_12_T64 TaxID=1856302 RepID=A0A1Y5FQD2_9PROT)

HSP 1 Score: 282 bits (722), Expect = 3.130e-88
Identity = 168/367 (45.78%), Postives = 211/367 (57.49%), Query Frame = 3
Query:   45 PHLGHAYTSAMTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKKFYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYL-SYEGWYSIRDEAFYTEAELKR*STNRSRCRVGMRRK------LFLSFITMER*IT*IL**KS*FYCTKRHRNEMLSFMNQEGGLKDLSISRTTFSWGVPVPNHSNHVMYVWLDALTNY*PQ*VIRMLKKRNLNSIGQHPTCGG*GYSK--------ISCDIL--------ACLMAAELPLEAYICTRLVDLRW-----EKMSKSIGNVLDPIELIDRYGSDYVRYYMASEFHFGNDGDFSHESFCHRINVDLANDLGNLAQRVV 1061
            PH+GHAYT+   D++AR+ +LD  +V FLTGTDEHG KVE SA KA +    F   VS+ F D+T     SN+DFIRTTE RH E  Q +WK LE  G IYL SY GWY++RDEAFYTE EL +          G   +       F      E  +  +      F      RNE++SF+  +GGL+DLS+SRTTF WGVPVP +  H+MYVWLDALTNY             L ++G +P      Y K        +  DIL        A LMAA+LPL      R+    W     +K+SKSIGNV+DP+ELI+ YG D VRY+M  E  FG DGD+S  +   R+N DLAND+GNLAQRV+
Sbjct:   22 PHIGHAYTTLACDVLARFKRLDGYDVKFLTGTDEHGQKVEASAEKAGIDPQTFTDQVSQNFRDLTGLCNFSNDDFIRTTEDRHKEACQHIWKVLEDKGYIYLGSYAGWYAVRDEAFYTETELTKGPNGEKIAPTGAEVEWVEEPSYFFKLSAFEDKLLDLYQNDPGFVGPDSRRNEVISFV--KGGLRDLSVSRTTFKWGVPVPGNDEHIMYVWLDALTNY-------------LTAVG-YPDENNDQYKKFWPASIHMVGKDILRFHAIYWPAFLMAADLPLPK----RVFAHGWWTNDGQKISKSIGNVIDPVELIEEYGLDQVRYFMMREVPFGKDGDYSRRAIISRMNGDLANDIGNLAQRVL 368          
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Match: UPI001FF16197 (methionine--tRNA ligase n=1 Tax=Kordiimonas sp. 5E331 TaxID=2917717 RepID=UPI001FF16197)

HSP 1 Score: 284 bits (726), Expect = 5.840e-87
Identity = 165/369 (44.72%), Postives = 217/369 (58.81%), Query Frame = 3
Query:   42 IPHLGHAYTSAMTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKKFYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYLS-YEGWYSIRDEAFYTEAELKR*STNRSRCRVGM------RRKLFLSFITMER*IT*IL**KS*FYCTKRHRNEMLSFMNQEGGLKDLSISRTTFSWGVPVPNHSNHVMYVWLDALTNY*PQ*VIRMLKKRNLNSIGQHPTCGG*GYSK--------ISCDIL--------ACLMAAELPLEAYICTRLVDLRW-----EKMSKSIGNVLDPIELIDRYGSDYVRYYMASEFHFGNDGDFSHESFCHRINVDLANDLGNLAQRVVT 1064
            +PH+GHAYT+   D++AR+ +LD  +V FLTGTDEHG KVE+SA KA V  +EF   VS +F ++ K++  SN+ FIRTTE+RH + VQ LW+RL   G IY   Y GWYS+RDEAFY E+EL     +      G           F      E  +  +   +  F   K   NE+ SF+  +GGL++LSISRTTF+WGVPVPN   H+MYVW+DALTNY             L ++G +P   G  Y K        +  DIL        A LMAA+LPL      R+    W     +K+SKS+GNV+DP ELI+ +G D  R+++  E  FGNDGDFS +SF HR N DLAN LGNL+QR ++
Sbjct:   19 VPHIGHAYTTLACDVLARFKRLDGYDVMFLTGTDEHGQKVEKSAEKAGVAPLEFCDRVSARFQELAKAMNFSNDQFIRTTEERHKKSVQHLWERLVEKGFIYEDKYAGWYSVRDEAFYAESELIDGEGDEKLAPTGAPVEWVEEPSYFFKLSAFEDKLLELYDGQENFVMPKSRLNEVRSFV--KGGLENLSISRTTFNWGVPVPNADGHIMYVWIDALTNY-------------LTAVG-YPDTDGVDYQKFWPANVHMVGKDILRFHAVYWPAFLMAADLPLP----NRVFAHGWWTNEGQKISKSLGNVIDPFELIETFGLDETRFFLMREVPFGNDGDFSRQSFVHRANADLANGLGNLSQRTLS 367          
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Match: A0A845QC86_9HYPH (Methionine--tRNA ligase n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QC86_9HYPH)

HSP 1 Score: 283 bits (723), Expect = 1.720e-86
Identity = 162/380 (42.63%), Postives = 217/380 (57.11%), Query Frame = 3
Query:   45 PHLGHAYTSAMTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKKFYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYLS-YEGWYSIRDEAFYTEAELKR*STNRSRCRVGMRRK------LFLSFITMER*IT*IL**KS*FYCTKRHRNEMLSFMNQEGGLKDLSISRTTFSWGVPVPNHSNHVMYVWLDALTNY*PQ*VIRMLKKRNLNSIGQHPTCGG*GYSK--------ISCDIL--------ACLMAAELPLEAYICTR-LVDLRWEKMSKSIGNVLDPIELIDRYGSDYVRYYMASEFHFGNDGDFSHESFCHRINVDLANDLGNLAQRVVTWFIAIMTGLYP-PGCI 1109
            PH+GHAY +  TD++AR+ +LD  +V+FLTGTDEHG K+ ++A K  +T  E A   +  F ++  ++GCSN+DFI T E+RH++  QE+W+RL A G IYL  YEGWYS+RDEAFYTE EL            G   K       F      +  +  +   +  F      RNE++SF+  +GGLKDLS+SR T  WGVPVP   +HVMYVW+DALTNY             +  +G  P      ++K        I  DIL        A LM+A++PL   +     +  R EKMSKS+GNVLDP E+ID+YG D  RY+   E  +G DG + HE+  +RIN DLANDLGNLAQR ++       G  P PG +
Sbjct:   20 PHIGHAYEALSTDVLARFKRLDGYDVFFLTGTDEHGQKMVETAEKEGITPAELADRNTPMFKNLAAALGCSNDDFITTREERHVKASQEIWRRLAAKGDIYLGKYEGWYSVRDEAFYTETELTEGPNGEKLAPTGTEVKWMEEESYFFKLSAYQDKLMELYESQPGFVQPDARRNEIMSFV--KGGLKDLSVSRKTLKWGVPVPGDDDHVMYVWIDALTNY-------------ITGVG-FPDTDEEAFTKYWPADLHIIGKDILRFHTVYWPAFLMSADVPLPKRVFAHGFLYNRGEKMSKSLGNVLDPFEMIDKYGLDPFRYFFCREVPYGQDGSYGHEAMVNRINADLANDLGNLAQRSLSMIAKNCDGKVPQPGAL 383          
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Match: A0A1C3RD23_9PROT (Methionine--tRNA ligase n=1 Tax=Candidatus Terasakiella magnetica TaxID=1867952 RepID=A0A1C3RD23_9PROT)

HSP 1 Score: 284 bits (727), Expect = 1.900e-86
Identity = 169/383 (44.13%), Postives = 221/383 (57.70%), Query Frame = 3
Query:   45 PHLGHAYTSAMTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKKFYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYLS-YEGWYSIRDEAFYTEAELKR*STNRSRCRVGMRR-------KLFLSFITMER*IT*IL**KS*FYCTKRHRNEMLSFMNQEGGLKDLSISRTTFSWGVPVPNHSNHVMYVWLDALTNY*PQ*VIRMLKKRNLNSIGQHPTCGG*GYSK--------ISCDIL--------ACLMAAELPLEAYICTRLVDLRW-----EKMSKSIGNVLDPIELIDRYGSDYVRYYMASEFHFGNDGDFSHESFCHRINVDLANDLGNLAQRVVTWFIAIMTGLYP-PG 1103
            PH+GHAYTS   D++AR+ +LD  +V FLTGTDEHG KVE+SA    V    F   VS+ F D+ + +G +NNDFIRTTE+RH +  Q LW  L   G IYL  YEGWY++RDEAFYTE EL++        +              F      E  +       + F   K  RNE++SF+  +GGL+DLS+SRTTF WG+PVPN  +H+MYVW+DALTNY             + + G +P      Y K        +  DIL        A LMAA+LPL      R+    W     EK+SKS+GNV+DPI+L+++YG D VRY+M  E  FGNDGDF+H S   R+N +LANDLGNL+QRV++  +    G  P PG
Sbjct:   19 PHIGHAYTSLACDVMARFKRLDGYDVKFLTGTDEHGQKVEKSATAKGVDPQTFTDGVSQNFRDLAEFMGFTNNDFIRTTEERHKKACQALWNTLIEKGDIYLGGYEGWYAVRDEAFYTEDELEKKPDGTRIAKASGAEVEWVEEPSYFFKLSAYEDKLLAYYEENADFILPKSRRNEVISFV--KGGLQDLSVSRTTFKWGIPVPNDDDHIMYVWMDALTNY-------------MTAAG-YPDVECDEYKKYWPADVHMVGKDILRFHAVYWPAFLMAADLPLPK----RVFAHGWWTNEGEKISKSLGNVIDPIDLVNKYGLDQVRYFMLREVPFGNDGDFAHSSMIARMNGELANDLGNLSQRVLSMVVKNCDGAVPTPG 381          
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Match: UPI00057026E3 (methionine--tRNA ligase n=1 Tax=Thermopetrobacter sp. TC1 TaxID=1495045 RepID=UPI00057026E3)

HSP 1 Score: 282 bits (722), Expect = 2.930e-86
Identity = 168/378 (44.44%), Postives = 218/378 (57.67%), Query Frame = 3
Query:   45 PHLGHAYTSAMTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKKFYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYLS-YEGWYSIRDEAFYTEAELKR*STNRSRCRVGMR------RKLFLSFITMER*IT*IL**KS*FYCTKRHRNEMLSFMNQEGGLKDLSISRTTFSWGVPVPNHSNHVMYVWLDALTNY*PQ*VIRMLKKRNLNSIGQHPTCGG*GYSK-------ISCDIL--------ACLMAA--ELPLEAYICTRLVDLRWEKMSKSIGNVLDPIELIDRYGSDYVRYYMASEFHFGNDGDFSHESFCHRINVDLANDLGNLAQRVVTWFIAIMTGLYP-PG 1103
            PH+GHAY +  TD +AR+ +LD  +V+FLTGTDEHG K++Q+AAK  +T  EF   ++ KF  M +++ CSN+DFIRTTE+RHI  VQELW+R+ ANG IYL  Y GWYS+RDEA+Y E EL      +     G           F      +  +         F      RNE++SF+  + GL+DLSISRTTF WG+PVP+   HVMYVW+DALTNY             L+ +G  P      +         I  DI+        A LM+A  ELP   Y    L + R +KMSKSIGNV+ P +LI+ YG D VRY+   E  FG DG++SHE+  +RIN DLANDLGNLAQR ++       G  P PG
Sbjct:   25 PHIGHAYEALATDALARFKRLDGHDVFFLTGTDEHGQKIQQTAAKHGMTPREFVDMMAPKFMKMVEALNCSNDDFIRTTEERHIRSVQELWRRMAANGDIYLGKYAGWYSVRDEAYYAEDELIEGENGQKLAPTGTEVQWMEEESYFFRLSAYQDKLLDYYEKNPDFIGPPERRNEVISFV--KSGLQDLSISRTTFDWGIPVPDAPGHVMYVWVDALTNY-------------LSGVG-FPDESNPRWKYWPADLHVIGKDIIRFHAVYWPAFLMSAGVELPRRVYGHGFLFN-RGQKMSKSIGNVVSPFDLIEEYGVDSVRYFFLREVPFGQDGNYSHEAIVNRINADLANDLGNLAQRSLSMIYKYCDGAIPEPG 385          
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Match: A0A849EA79_9HYPH (Methionine--tRNA ligase n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849EA79_9HYPH)

HSP 1 Score: 282 bits (721), Expect = 3.240e-86
Identity = 160/369 (43.36%), Postives = 218/369 (59.08%), Query Frame = 3
Query:   45 PHLGHAYTSAMTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKKFYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYLS-YEGWYSIRDEAFYTEAELKR*STNRSRCRVGM------RRKLFLSFITMER*IT*IL**KS*FYCTKRHRNEMLSFMNQEGGLKDLSISRTTFSWGVPVPNHSNHVMYVWLDALTNY*P-------Q*VIRMLKKRNLNSIGQHPTCGG*GYSKISCDILACLMAAELPLEAYICTR-LVDLRWEKMSKSIGNVLDPIELIDRYGSDYVRYYMASEFHFGNDGDFSHESFCHRINVDLANDLGNLAQRVVTWFIAIMTGLYP-PG 1103
            PH+GHAY +  TD +AR+ +LD  +V F+TGTDEHG K++Q+A K + T  EF   ++ KF  M K++ CSN+DFIRT+E RH E VQ +WKR++A G IYL  Y GWYS+RDEAFY E EL+     +   + G           F      +  +  +   +  +      RNE++SF+  +GGLKDLS+SRTTF WG+PVP    H+MYVW+DALTNY           V+      +++ IG+        Y        A LM+A LPL   +     +  R EKMSKS+GNV+DP  +ID+YG D VRY+   E  FG DG++SHE+  +R+N DLANDLGNLAQR ++       G+ P PG
Sbjct:   20 PHIGHAYEALATDAMARFKRLDGYDVLFVTGTDEHGQKIQQTAQKQDRTAAEFVDEMAPKFEAMVKALNCSNDDFIRTSEPRHYEAVQTIWKRMDAAGDIYLDKYAGWYSVRDEAFYGEEELEDRDGGKFAVKTGTPVEWVEEESYFFKLSAYQDKLLKLYDEQPDYIGPSERRNEVVSFV--KGGLKDLSVSRTTFDWGIPVPGAPGHIMYVWVDALTNYMTATGYLKDDPVLAKYWPADVHIIGKDIVRFHAVYWP------AFLMSAGLPLPKRVFGHGFLFNRGEKMSKSVGNVVDPQSMIDQYGVDQVRYFFMREVPFGQDGNYSHEAIVNRVNADLANDLGNLAQRSLSMIANYCEGIMPSPG 380          
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Match: A0A2S6S8Q0_9PROT (Methionine--tRNA ligase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6S8Q0_9PROT)

HSP 1 Score: 281 bits (720), Expect = 3.480e-86
Identity = 167/364 (45.88%), Postives = 217/364 (59.62%), Query Frame = 3
Query:   33 CQWIPHLGHAYTSAMTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKKFYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYLS-YEGWYSIRDEAFYTEAELKR*STNR-----SRCRVGMRRKLFLSFITMER*IT*IL**KS*FYCTKRHRNEMLSFMNQEGGLKDLSISRTTFSWGVPVPNHSNHVMYVWLDALTNY*PQ*VIRMLKKRNLNSIGQHPTCGG*GYSKISCDIL--------ACLMAAELPLEAYICTRLVDLRW-----EKMSKSIGNVLDPIELIDRYGSDYVRYYMASEFHFGNDGDFSHESFCHRINVDLANDLGNLAQRVVTW 1067
            C  +PHLGHAYT+   DI+ARYH+LDN NVYFLTGTDEHG KVEQSA   N +T E    +SK F D+TK + C+NNDFIRTTE+RH   V +LW  L  N QIYL  Y+GWYSIRDEAF+ E ELK+ ++       ++         F         +         F       NE+ SF+  + GLKDLSISRTTF+WG+PVPN++NHV+YVWLDAL NY     +  L+  + +S        G     +  DIL        A LMAA LP       R+    W      K+SKS+GNV+DP ++I+ +G D  RY++ S+  FG+DGDFS ++  +RIN DL+ND GNL QRV ++
Sbjct:   13 CNDLPHLGHAYTNIACDILARYHRLDNKNVYFLTGTDEHGQKVEQSAKSKNTSTKELTDRMSKNFLDLTKILNCTNNDFIRTTEERHKISVHKLWNILLKNDQIYLDKYKGWYSIRDEAFFDEKELKKINSEYYAPTGAKVEWIEEESYFFRLSNWTDKLIEFYNKNPDFVAPDTRFNEVKSFV--KSGLKDLSISRTTFNWGIPVPNNNNHVIYVWLDALQNY-----LSALEFPDTDSKLYKDFWPG--THIVGKDILRFHSIYWPAFLMAANLPPPL----RIYAHGWFTNEGNKISKSLGNVIDPFQIINEFGLDEFRYFLFSQVPFGDDGDFSIKALVNRINNDLSNDYGNLVQRVCSF 363          
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Match: A0A850KDK5_9HYPH (Methionine--tRNA ligase n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A850KDK5_9HYPH)

HSP 1 Score: 283 bits (723), Expect = 8.040e-86
Identity = 166/383 (43.34%), Postives = 221/383 (57.70%), Query Frame = 3
Query:   45 PHLGHAYTSAMTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKKFYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYL-SYEGWYSIRDEAFYTEAELKR*STNRSRCRVGMRR-------KLFLSFITMER*IT*IL**KS*FYCTKRHRNEMLSFMNQEGGLKDLSISRTTFSWGVPVPNHSNHVMYVWLDALTNY*PQ*VIRMLKKRNLNSIGQHPTCGG*GYSK--------ISCDIL--------ACLMAAELPLEAYICTRLVDLRW-----EKMSKSIGNVLDPIELIDRYGSDYVRYYMASEFHFGNDGDFSHESFCHRINVDLANDLGNLAQRVVTWFIAIMTGLYP-PG 1103
            PH+GHAYTS   D++AR+ +LD  +V FLTGTDEHG KVE+SA    +    F   VS+ F D+   +G SN+DFIRTTE+RH +  Q LWK+L  NG IYL +YEGWY++RDEAFY E E ++        +              F      E  +         F   K  RNE++SF+  +GGL+DLS+SRTTF WG+PVP+   H+MYVWLDALTNY             + ++G +P  G  GY K        +  DIL        A LMAA+LP       R+    W     +K+SKS+GNV+DPI+L+++YG D VRY+M  E  FGNDGDF+H +   R+N +LANDLGNL+QRV++  +       P PG
Sbjct:   20 PHIGHAYTSLACDVMARFKRLDGYDVKFLTGTDEHGQKVEKSANLKGIDPQSFTDGVSQNFRDLAAFMGYSNDDFIRTTEERHKKACQALWKKLLDNGDIYLGAYEGWYAVRDEAFYMEDETEKKPDGTRIAKASGAEVEWVEEPSYFFKLSAWEDRLLKFYDENPNFILPKSRRNEVISFV--KGGLQDLSVSRTTFKWGIPVPDDDAHIMYVWLDALTNY-------------ITAVG-YPDTGNEGYKKYWPADVHMVGKDILRFHAVYWPAFLMAADLPAPK----RVFAHGWWTNEGQKISKSLGNVIDPIDLVNKYGLDQVRYFMLREVPFGNDGDFAHSAMVSRMNGELANDLGNLSQRVLSMVVKNCDAAVPTPG 382          
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Match: A0A7Y2FS27_9HYPH (Methionine--tRNA ligase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2FS27_9HYPH)

HSP 1 Score: 281 bits (718), Expect = 8.570e-86
Identity = 159/373 (42.63%), Postives = 215/373 (57.64%), Query Frame = 3
Query:   45 PHLGHAYTSAMTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKKFYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYLS-YEGWYSIRDEAFYTEAELKR*STNRSRCRVGM------RRKLFLSFITMER*IT*IL**KS*FYCTKRHRNEMLSFMNQEGGLKDLSISRTTFSWGVPVPNHSNHVMYVWLDALTNY*PQ*VIRMLKKRNLNSIG-QHPTCGG*GYSKISCDIL-------------ACLMAAELPLEAYICTR-LVDLRWEKMSKSIGNVLDPIELIDRYGSDYVRYYMASEFHFGNDGDFSHESFCHRINVDLANDLGNLAQRVVTWFIAIMTGLYP 1097
            PH+G AY +  TD +AR+  LD  +V+FLTGTDEHG K++Q+AAK   T +EF   ++ KF +M  ++ CSN+DFIRTTE RH   V E+WKR+ ANG IYL  Y GWYS+RDEAFY E EL+     ++  + G           F      +  +  +   +  F      RNE++SF+  +GGL+DLS+SRTTF WG+PVP+   HVMYVW+DALTNY             +++ G  +P     G+      I+             A LM+A LPL   +     +  + EKMSKS+GNV+DP  L+ +YG D VRY+   E  FG DG++SHE+   RIN DLANDLGNLAQR ++       G  P
Sbjct:   19 PHIGQAYEALATDALARFKALDGYDVFFLTGTDEHGQKIQQTAAKEGKTPVEFVEEMTPKFREMVAALNCSNDDFIRTTEPRHYASVTEIWKRMVANGDIYLDKYAGWYSVRDEAFYVEKELEDRDGVKTSIKTGTPVEWVEEESYFFRLSAYQDKLLELYTSQPDFIGPPERRNEVMSFV--KGGLQDLSVSRTTFDWGIPVPDAPGHVMYVWVDALTNY-------------ISATGFPNPDADRAGFWPADVHIIGKDIIRFHAVYWPAFLMSAGLPLPKRVYGHGFLFNKGEKMSKSVGNVIDPASLVAQYGVDQVRYFFMREVPFGKDGNYSHEAIVTRINADLANDLGNLAQRSLSMIAKNCDGKVP 376          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1529.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0012BCA67E3.560e-9245.01methionine--tRNA ligase n=1 Tax=Curvivirga aplysin... [more]
A0A1Y5FQD2_9PROT3.130e-8845.78Methionine--tRNA ligase (Fragment) n=1 Tax=Rhodosp... [more]
UPI001FF161975.840e-8744.72methionine--tRNA ligase n=1 Tax=Kordiimonas sp. 5E... [more]
A0A845QC86_9HYPH1.720e-8642.63Methionine--tRNA ligase n=1 Tax=Pyruvatibacter mob... [more]
A0A1C3RD23_9PROT1.900e-8644.13Methionine--tRNA ligase n=1 Tax=Candidatus Terasak... [more]
UPI00057026E32.930e-8644.44methionine--tRNA ligase n=1 Tax=Thermopetrobacter ... [more]
A0A849EA79_9HYPH3.240e-8643.36Methionine--tRNA ligase n=1 Tax=Anderseniella sp. ... [more]
A0A2S6S8Q0_9PROT3.480e-8645.88Methionine--tRNA ligase n=2 Tax=Alphaproteobacteri... [more]
A0A850KDK5_9HYPH8.040e-8643.34Methionine--tRNA ligase n=1 Tax=Methylocystaceae b... [more]
A0A7Y2FS27_9HYPH8.570e-8642.63Methionine--tRNA ligase n=1 Tax=Hyphomicrobiales b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1529contigP-littoralis_Contig1529:5988..7603 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1397666.RS24_00296
Preferred namemetG
PFAMsAnticodon_1,tRNA-synt_1g
Model size1360
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00055,RC00523
KEGG koko:K01874
KEGG ReactionR03659,R04773
KEGG Pathwayko00450,ko00970,map00450,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
Exons2
Evalue9.65e-36
EggNOG OGsCOG0143@1|root,COG0143@2|Bacteria,1MUBY@1224|Proteobacteria,2TQKA@28211|Alphaproteobacteria,4BP84@82117|unclassified Alphaproteobacteria
EC6.1.1.10
DescriptionIs required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Cds size342
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789730.0913239-UTR-P-littoralis_Contig1529:5987..65191680789730.0913239-UTR-P-littoralis_Contig1529:5987..6519Pylaiella littoralis U1_48UTRP-littoralis_Contig1529 5988..6519 -
1680789730.106144-UTR-P-littoralis_Contig1529:6775..71871680789730.106144-UTR-P-littoralis_Contig1529:6775..7187Pylaiella littoralis U1_48UTRP-littoralis_Contig1529 6776..7187 -
1680789730.129707-UTR-P-littoralis_Contig1529:7529..76031680789730.129707-UTR-P-littoralis_Contig1529:7529..7603Pylaiella littoralis U1_48UTRP-littoralis_Contig1529 7530..7603 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789730.116412-CDS-P-littoralis_Contig1529:7187..75291680789730.116412-CDS-P-littoralis_Contig1529:7187..7529Pylaiella littoralis U1_48CDSP-littoralis_Contig1529 7188..7529 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1529.2.1prot_P-littoralis_Contig1529.2.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1529 7188..7529 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1529.2.1

>prot_P-littoralis_Contig1529.2.1 ID=prot_P-littoralis_Contig1529.2.1|Name=mRNA_P-littoralis_Contig1529.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp
MTDIIARYHKLDNANVYFLTGTDEHGTKVEQSAAKANVTTIEFASYVSKK
FYDMTKSIGCSNNDFIRTTEKRHIEGVQELWKRLEANGQIYLSYEGWYSI
RDEAFYTEAELKR*
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mRNA from alignment at P-littoralis_Contig1529:5988..7603-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1529.2.1 ID=mRNA_P-littoralis_Contig1529.2.1|Name=mRNA_P-littoralis_Contig1529.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1616bp|location=Sequence derived from alignment at P-littoralis_Contig1529:5988..7603- (Pylaiella littoralis U1_48)
CAAGATTTTTATATAACCACACCAATTTATTATGTCAATGGATCCCTCAT CTAGGTCATGCATATACATCAGCAATGACAGATATTATCGCACGCTACCA TAAGCTAGATAATGCGAATGTTTATTTTCTGACAGGTACAGATGAGCATG GCACAAAAGTAGAACAAAGTGCAGCTAAAGCTAATGTTACAACAATTGAG TTTGCGTCTTATGTATCAAAGAAGTTTTATGATATGACGAAATCGATAGG ATGCAGTAATAATGATTTTATACGTACAACAGAAAAACGTCATATTGAAG GTGTACAAGAGCTCTGGAAACGTCTCGAAGCAAATGGACAAATATATCTG AGCTATGAAGGTTGGTATTCTATTCGTGATGAAGCATTTTATACTGAAGC TGAACTAAAACGGTAAAGCACCAACAGGAGCAGATGTAGAGTGGGTATGA GAAGAAAGTTATTTCTTTCGTTTATCACAATGGAAAGATAAATTACTTGA ATATTATGATAAAAATCCTGATTTTATTGCACCAAAAGGCACCGTAATGA AATGCTTAGTTTTATGAACCAAGAAGGTGGACTGAAAGATTTATCTATCT CAAGAACAACCTTTTCATGGGGTGTTCCTGTACCGAATCATTCCAATCAT GTTATGTATGTATGGTTAGATGCATTAACCAATTACTGACCGCAATAGGT TATCCGGATGTTGAAGAAGAGAAATTTAAACAGTATTGGCCAGCATCCCA CATGTGGTGGGTAAGGATATTCTAAGATTTCATGCGATATTCTGGCCTGC CTTATGGCAGCTGAGCTGCCTCTGGAAGGTGAGCTACTGGTCTACTTGTT TCTATACTTCTGAATGGTTTCTGAATAGTTATTTGAATGGTTATTTGATA AATGAAGATTCTTGTCTGGTATTATAGTATACTTGTTATGTATATAGTTA AGCTAATATTGTAACACTAGCGTGTATATATTACTACTTATATACTACCA TATTATCATACTTACATATACATTGATAGATAGATATAACCTGTTTGTAT TACAACCAATTATTTATTCATCTATTCAATACAGCGTATATTTGCACACG GCTGGTGGACCTGAGATGGGAGAAAATGTCCAAATCAATCGGGAACGTGT TGGATCCCATCGAGCTGATCGACCGGTACGGCTCGGACTATGTGCGATAC TATATGGCATCTGAGTTCCACTTCGGTAATGATGGAGACTTCTCACATGA GTCATTCTGTCATCGTATTAATGTAGATTTAGCCAATGATTTGGGAAATT TAGCTCAGCGTGTAGTAACTTGGTTCATCGCCATTATGACGGGATTGTAC CCACCCGGGTGTATTTACTACAGAAGATCATGAAATATTCACAATATTAC AAGAACATTTACCACAAGTACGACATCACTTGAAACAGCAAGGAATTAAA CATATATGATTCAATTATTTCCTTGCTAAGATGGGAAATAAGCACATTGA CACTCAAGCACCATGGGTTTTAACAAACTGATCCTGAGCGTGTAAAAACG GTATTGTATGTACTGGTTGAGTTATTACGTGTGGCAGGAATTACTTTACA GCCAGTGACCCCCAGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1529:5988..7603-

>mRNA_P-littoralis_Contig1529.2.1 ID=mRNA_P-littoralis_Contig1529.2.1|Name=mRNA_P-littoralis_Contig1529.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig1529:5988..7603- (Pylaiella littoralis U1_48)
ATGACAGATATTATCGCACGCTACCATAAGCTAGATAATGCGAATGTTTA
TTTTCTGACAGGTACAGATGAGCATGGCACAAAAGTAGAACAAAGTGCAG
CTAAAGCTAATGTTACAACAATTGAGTTTGCGTCTTATGTATCAAAGAAG
TTTTATGATATGACGAAATCGATAGGATGCAGTAATAATGATTTTATACG
TACAACAGAAAAACGTCATATTGAAGGTGTACAAGAGCTCTGGAAACGTC
TCGAAGCAAATGGACAAATATATCTGAGCTATGAAGGTTGGTATTCTATT
CGTGATGAAGCATTTTATACTGAAGCTGAACTAAAACGGTAA
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