mRNA_P-littoralis_Contig1518.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 1189 bits (3077), Expect = 0.000e+0 Identity = 601/965 (62.28%), Postives = 738/965 (76.48%), Query Frame = 3
Query: 825 LAERVFNRLN--VPRGGGA---PHTARPSGVDHDEVPVKRTSLKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTVGKSSPWHTFVRCYGLASPCIIGCAYVPSGGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHV---TREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIP 3695
+ R F RL+ P+ G + P TA+ T+LK+ TLN+NGV++KK L+R+L ++CIALQETTLT TDWALN+PGYRTF VYGERT STRG AIL++N +GAQTVGKSSPWHTFVRCYGL GK PLRT+R+Q+R LR ++P DSI+LMGDFNR+R V++W I+V EL KDA+LGTR+HGSKR IDH+++ +AHP+D LR PRV+RKVDISDHYP+VSTFRSDRADA+T D +GV + T + G+ RI +PMPG++WY++ G RG+ NHQ+++H+ YW PL DL+EEG +L D A+ DAAA+RMV+ + QVA+ TK +R PALK IARAIDDRG++YR A++ R + AW Y E + AERLVR+DRR+ WTKAL TAS Q+R+DPKA W F S VAGWKRKD+ GLQPV+HPD+ L+T A DISA+W+THY+RLA+DVTGNSR D+W W AAPQR H+ LD PI E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGVRG ML FIR LYANS+I+VRTGDL S++F L+RGVRQGCPLSPVLFNIFINDILDG E+LGVP GN +ER R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG RRL PDRWKLAG LPIV YTYLGL FNR+LDVEVMMGNKLAAG ++V+ M P+L CRQIPVP++VAVVRGVILPRLLFGAEV+GMR +IT+R+Q+ +N+A+R+VAG+ A VS+VALWREL+IP
Sbjct: 1 MFHRAFRRLDRTQPQSGNSGEVPGTAKEGN----------TTLKVATLNINGVKSKKIQLQRVLAMYRINCIALQETTLTVTDWALNVPGYRTFAVYGERTSSTRGAAILLRNKMGAQTVGKSSPWHTFVRCYGL-----------------GKVPLRTVRNQMRDLRVKYPNDSIILMGDFNRLRPRVEQWFNCAYESIRVWELTGKDADLGTRDHGSKRVIDHIMTSLAHPQDTLRAPRVLRKVDISDHYPVVSTFRSDRADAST------GDSVGVPINARTIQRGE--RINTGLIPMPGTHWYQESGPRGRANHQKVIHANYWEPLADLIEEGNEELSPEDTTALVDAAASRMVEASHQVARECGQTKDSSTQRAPALKPQIARAIDDRGRLYRAAKRLRKNSPRAKVAWERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIP 930
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO) HSP 1 Score: 399 bits (1025), Expect = 1.800e-114 Identity = 288/843 (34.16%), Postives = 426/843 (50.53%), Query Frame = 3
Query: 1242 YVPSGGRAGKEPLRT-IRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAEL---GTREHGSKRTIDHMVSMMAHPEDHLRRPRVI---RKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRR-ARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDP--KAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDV-TGNSRSPDQWVKWT----AAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGD---LFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTR--RLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAI-THRMQLQMNKAFRLVAGVGASA-AVSNVALWRELDI 3692
Y+P+G + EP R +R +L +LRE+FP+D+IV+ GD+N ++D LRR + +DA GT GS R IDH V+ L P + D SDH+P+ A P G R+ ++P P R+ P D EG + A AD + TA +V V++ R P L+ SI AI R + ++ RG ++ A Y + + +VR +RR+ +A+ A R + FWK++ +A + QPV P +GVL T +I+A W HY L D R+ W P P L ++ PI EL +AL RL +KASG DG+ A+ LKLA +SP K+LL ++N +W + +P++W S VVSI KKGDV M+NYRGIS+M ++K+L+ +++ RL + + + L Q GF EEC Q A + +IA RR+ T+ F+DL+KAYDT+PHE LF+KL+ G+ G+ML F++ LY +S + V+TG+ + S+ ++RG+RQGCP SP+LFNIFINDI DG E LG V G + + RV G LFADD V +A + + L + ++W +++ M G+ KCGVMA+G + L DRW+L G +P+V EY YLG + N L + ++G+++ R V A+ L R IP+ +R +V++ ILP L +G EV+GM +R+Q +N+ R + GVGA A V+ L REL I
Sbjct: 15 YLPTGSQG--EPYRCRLREELAQLREKFPRDTIVVGGDWNLDEAQLDALLRRWRCVPDAKTIWPRDASARVRGTCRRGSCRVIDHFVAWPPVMGPSLSFPHSVFVDYSWDTSDHFPVF-------------ASVPRLVGDSFEHPHPPLMLERLSVRSIPKPARGDPPSEWPTPFRDFVTANPFAILAPPNDEPMEGAMSREPDSIDADADGFVQAVWSTARRVGA---VSRTRRKSLGPPLQRSILGAIARRRHAFLALCQEARGPI--QSVALDRYIAARLRVKNMVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELGI 835
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM) HSP 1 Score: 407 bits (1045), Expect = 2.540e-114 Identity = 300/899 (33.37%), Postives = 438/899 (48.72%), Query Frame = 3
Query: 1215 ASPCIIGCAYVP--SGGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVS----MMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQR-----NHQRMVHSTYWTPLLDLLEEGE-GDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAA-----------------YEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKF----------------SSDVAGWKRKDTGS---GLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFG---LKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSST-PDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPRFA 3704
A ++G YVP S G+ E L + SQL+ L QFP +V++GD+N E+ + L R P+ + A T + IDH V M H H R RV R D+SDH+PL+ A P + +G IE W R G +R R + Q +VH +W PL L+++ E DLD D AA R+V T +VA+ + L++ +P S A G+ + +TR A + A + Y T+ A+ VR++ R +W K +Q +R D K W++ S AG+ + QP+KHP + ++T +I+ +W ++ LA D TG+ W + ++ P P L L+ P+ E+ ALL +K KA G DG+ ADFLKL G D G ++ PMA L +L MW + +P W + VV I K +GD +M NYRGISL+ VLK+L II+ RL ++ N H QAGFR +EEC+ L E+ +RR++ + ++L F+DLKKAYDTVPH ALF KL+ GVRG L FI+ LY +S +S R L+RG+RQGCP+SP+LFN+FINDI+D LGV V G + R T + GLLFADDLV ++ ++L Q D +T W + EM G+ KC +M I + LSS D+W L G +P+V EY YLG + + LD++ + ++ + + +++PFL CR IP+ +R V ++ P L+GAE++G+R+ T + A + +AG L REL IP A
Sbjct: 256 AEAWVVGSIYVPPRSAGKRRTEVLHLLLSQLKALLRQFPSTPLVVLGDWNMREQELAKLLARWHLPLARASVCGNPATTHTPRLRPRSAIDHAVYRTDIMRTH---HQLRCRVDRSWDLSDHWPLLVRCLYHNLHQQEHAPSP---SXXXXXSYSKGTCSDIEQG--------WVRVGRMRPLRLLSEDSKQELVHHNFWNPLRALMDQEEDSDLD-------VDDAAKRLVSTIQRVAQECHI--LKDAGERPPAGKSHTSAASSTGRAAHLSHRTRSLIARKRALFLKLQRIPHGSERWERTMREYLSTRHAAKTAVRKENRVSWLKYVQRGCMAVRGDCKRHWQWIRSLIRSSSSSSCTLPDSHQAGFSSCSSSVIDISRQPIKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAGTYTGT------LARELRIPPVA 1123
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG) HSP 1 Score: 368 bits (944), Expect = 7.300e-102 Identity = 291/951 (30.60%), Postives = 447/951 (47.00%), Query Frame = 3
Query: 930 TSLKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTVGKSSPWHTFVR-----CYGLASPCIIGCAYVPSGGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPI--RIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKW-TAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPRFALAPQHVVRERSKK 3743
T LK+ T N+ G K+ + L ++ +ALQET L A L + GY+T RGLAI ++ G+G + H G +I ++P K + + LR+LR + +D I+L GDFN+ L R ++ + G+R +G+ R IDH+ ++ +P +V++ VD+SDH P+++ + + D+ T V I V +E G+ AAL P E ++++L +R+ ++ A+ K+ + L +A + R K ++R GD T Y + K+ + L R DRR ++ A + + W + +G R G PV + D L+T + W TH+E+LA D TGNSRS D+W T A P D P++ E+ +AL +K+ G DG+P++ KL ++ SP+AK + I+N +W + +P++ S VV IPKKGD+ D NNYRGISL+ T+ KV+ I++ RL ++ + + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ + I LY + ++ VR G S+ GVRQGCP SP+LF+I+IND+L G + GV + G + +SGLLFADD V +A + L ++++ W Q+ EM KCG+M I STR L + + G + V Y YLG+VFN K + + N G + + +M FL + IP MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+ L EL I V RER K
Sbjct: 196 TKLKVMTFNIRGYIGKREEVDLLFQQYQPTILALQETNLNAKSNRLRLQGYQTVESKSHLRAGGRGLAIGVRKGLGLSISEMTQTPHWMAAEITGTSRGKKMTLLIINIHMPHQTNRRKLVIAALTKYLRKLRIKGRKDKIMLAGDFNKNTDSTVALLNRIGIGLRRATVTNSK---GSRMNGATMGRMIDHISFSGLINNPN----YTKVLKSVDLSDHLPVMAEWNIEALDSPT-----VPRKINVESIKELGESFVSNNRFAALTEP-----------------------------------EFNIEDL---------TSRLTKGIWESAEEVNAIKIEKISNSTVLSKETIKATNKRRKAFKR---LIGDPRTATE----YSDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRDLWSWLKRFSGRFRSSLIDG--PVYNNDH-KLITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTIAAVFPEC---DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML------FTIMGKPVEQVSNYKYLGVVFNDKWNHLSALQNNRENGRKALHSMYFFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDI-FTRVSVARERGHK 1062
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG) HSP 1 Score: 363 bits (932), Expect = 8.010e-102 Identity = 277/929 (29.82%), Postives = 444/929 (47.79%), Query Frame = 3
Query: 930 TSLKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKN--GIGAQTVGKSSPWHTF----VRCYGLASPCIIGCAYVPSGGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELD 3689
+ LK+ T N+ G +K+ + L + I LQET L A L I GY+T + RGLAI ++ G+ + +S W G I+ ++P K + + + LR+LR + + I+L+GDFN+ L R ++ + K + + G R IDH+ + A+ ++ + V++ VD+SDH P+++ + IE +P+P R + ++ R + + L L E + + + ++ T + +TA ++ K + + L I R K++++ K + Y E K+ + +L R+DRR + A + + W + +G R G P+ + L+T + + W H+E LA D TGNSRS ++W + + D P++ E+ AL +K+ G DG+P++ KL + SP AK LL ++N +W + IP++ S VV IPKKGD+ + NNYRGISL+ T+ KV+ IIS RL + ++N+ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+RG + I LY + ++ VR GD S+ GVRQGCP SP+LF+IFIND+L G + GV + G + E ++GLLFADD V +A + L ++L+ W + EM KCG+M I ST L + + G ++ V EY YLG+VFN K + + + G + +M FL + IP MRVA++R V++P L +G E++GM + +Q + A RLVAGVG S A+ + ++D
Sbjct: 18 SKLKVMTFNIRGYVSKREEIDLFLRQYQPTLITLQETNLNAKSNRLRIQGYQTVESKSQLRAGGRGLAIGVRKELGLSISELSQSPHWMATKISGTHSSGEKLSLIVVNLHMPHQTMRRKLVIWGLTNYLRKLRSKKKKTKILLVGDFNKDIKSTVSMLNRIGIGLRRAVVSNSKGSRMNNATMG--RMIDHVAYTGFANNPNYAK---VLKSVDLSDHLPVIAEWN-------------------------------IESLKIPLPPK---RIDTEKMKKQGTRFISDNRFAVLASL---------EPNTENLVNSVTTSIWETAEELD----ALKTMKAGYRRVLSNETLETIRKRRKVFKKLSKD-------PSLAIEYSELKEKSIQLSREDRRNNKKAEVNKACDLMLGNKSRELWSWLKRFSGRFRSSLVDG--PIFNKSR-QLVTDSETKAEVWAAHFEELARDSTGNSRSAEKW-RDIGSDSTEVFTECDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQRLRNELKID 871
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG) HSP 1 Score: 368 bits (945), Expect = 2.240e-100 Identity = 295/935 (31.55%), Postives = 445/935 (47.59%), Query Frame = 3
Query: 930 TSLKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGA------QT----VGKSSPWHTFVRCYGLASPCIIGCAYVPSGGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKR--KPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTD-PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELD 3689
+ LK+ T N+ G +K+ L +L++ IALQET L A L + Y T RGLA+ ++ G G QT K S H + + LA C+ ++P K + + LR++R++ + I+L+GDFN+ L R ++ +R G+R +G+ R IDH ++ P + +VI+ VD+SDH P+V+ + +E +P P RK + + S +LD LE DL E + + AA ++ ++E K+ K L AI R K+++ G N + + Y K+ A R DRR ++ A M T+ P+ W + +G + S + L+TG + S +W H+E LA D TGNSRS ++W + + D +T E+ AL +K+ G DG+P++ KL + SP AK ++N +W+ + IP++ S +V IPKKGD+ D NNYRGISL+ T+ KVL II+ RL++ +H++ QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ G + I LY + ++ VR GD S+ GVRQGCP SP+LF+IFIND+LDG + GV V G + E + GLLFADD V +A + L ++LT W + EM KCG+M I ST L + + G + V EY YLG+VFN K + + N G + +M FL R IP MR+A+VR V++P L +G E++GM +Q + A RLVAGVG S A+ + ++D
Sbjct: 642 SKLKVMTYNIRGYISKREELDLVLKQNRPSVIALQETNLNAKTNRLRLQEYVTVESKSHLRAGGRGLALGIRKGSGLSISELIQTPHWLAAKISGAHENDKRFSLA--CVN--LHMPHQTIRRKLVIIGLTRFLRKMRQKKKKSKIMLIGDFNKDTESTISMLNRIGIGLRRATVRNSK---GSRMNGAVMGRMIDH-ITYSGFPNNPTYA-KVIKSVDLSDHLPVVAEWD-------------------------------MEALKIPAP----QRKIDVERIKEVGVSFVSINRFAILDQLENDIEDLAENTAEEIWRAA--------------DELSCIKEEKQRFKTVLSKETLNAIQRRRKLFK------GISKNPSLS-EEYSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSG---RFLSSLIDGPIFDKNRKLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVY-TECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIK--GVKVPGIDTE----IPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML------FTIMGKPIKQVAEYKYLGVVFNDKWNNLSALKNNRDNGRKAFHSMYYFLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDAARLVAGVGRSTALQRIRNELKID 1495
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO) HSP 1 Score: 349 bits (895), Expect = 1.150e-98 Identity = 192/530 (36.23%), Postives = 299/530 (56.42%), Query Frame = 3
Query: 2040 WAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFR 3626
W ++EE A++ ++DR++ K L + ++ K W + +A +R +PV D L+ G +I +W++H+E+L+ D G S+ + W K P L D+PIT E+ AL + KA+G DG+P +F K+ D ESP + ++ ++ +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN + + QAGFRK EEC+ Q C EI +RR L+ K T +F+D KKAYD VPHE LFAKL YG G +L F+ +LY N + SVR GD S+TF + GV+QGCP SP LFN++IN+IL+G +G+ GN + V GLLFADD V A + + + + L W + +M I KCG+M + +R K AN+P V Y YLG+ NR LD++ ++ ++ + + + P + +IP+P+RV +++ V++P FG+E+YGM T +Q ++KA R
Sbjct: 93 WLSHEELTDQADKQKKRDRKENKRKYLMRGIKSFLQNRSKIHWNWLKTIARKRRPFV---AKPVIDRDKNELVFGTKEIGEAWRSHFEKLSKDDDGFSKDREYW-KTVIEPAAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQRAI------KYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVR 605
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Match: A0A1R1X4V9_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X4V9_9FUNG) HSP 1 Score: 349 bits (896), Expect = 7.910e-97 Identity = 270/917 (29.44%), Postives = 426/917 (46.46%), Query Frame = 3
Query: 948 TLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKN--GIGAQTVGKSSPWH----TFVRCYGLASPCIIGCAYVPSGGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRP---RVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNV 3668
T N+ G K+ + ++ + +ALQET L A L + GY+T RGLAI ++ GI + ++ W + V G + ++P K + + LR+LR + + IVLMGDFN+ L R ++ ++ G+R +G T+ M+ +A+ L P +V++ VD+SDH P++S + + P P RI+ A + G + + + ++ L D + + + + D+ T + +TA ++ K + + L I R KM+++ K + Y + K+ A +L R+DRR ++ A + + W + +G R G P+ + L+T + + W H+E LA D TGNSRS ++W D P++ E+ AL K+ G DG+P++ K ++ SP AK L ++ +W + IPE+ S VV IPKKGD+ + NNYRGISL+ T+ KV+ II RL + ++++ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPHEAL K+ G+ G + I LY + ++ VR G S+ GVRQGCP SP+LF+I+IND+LDG + + +P + GLLFADD V +A + L ++LT W + EM KCGVM I ST L + + G + V +Y YLG+VFN K + + N G + +M FL + IP MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+ +
Sbjct: 2 TFNIRGSIGKREEVDLVMRQYQPTILALQETNLNAKSNRLRLQGYQTIESKSHLRAGGRGLAIGVRKELGISVSELRQTPHWMAGAVSGVHNNGEKLKLFVINLHLPHQTNRRKLAILELTKYLRKLRSKKRKAKIVLMGDFNKDTNSTISMLNRIGIGLRRADVNNSK---GSRMNGV--TMGRMIDHVAY-SGFLNSPNYAKVLKSVDLSDHLPVISEWNIESLKTPVP-------------------PKRIDTAKMKEIG---------------ESFISNNRFSVLAD---------QDSNTENLVDSVTTSIWETAEELD----ALKTTPSEYRRVLSNETLETIRKRRKMFKKLAKDPSIEME-------YSDLKEKAIQLCREDRRNNRKAEVKKACDLMLGNKSRELWSWLKRFSGRFRSSLVEG--PIFDKNK-KLVTESEKKAEVWAAHFEELAKDSTGNSRSAEKW-HGMGNDSAGVFTECDTPLSWDEICAALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPFAKVLFRLIKEIWDTESIPEQLDASVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIVRRLGKIDNKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRAGGIGGKVHRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIKGVKIPGIDKGIP------GLLFADDAVVLAESPAELQIALEKLTAWSLKWEMQINQEKCGVMGINSSTGML------FTIMGKTIAQVSDYKYLGVVFNDKWNHLSALQNNRENGRKAFHSMYYFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQRL 842
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Match: A0A1R1XKG1_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XKG1_9FUNG) HSP 1 Score: 353 bits (905), Expect = 2.490e-96 Identity = 265/927 (28.59%), Postives = 446/927 (48.11%), Query Frame = 3
Query: 924 KRTSLKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTVGKSSPWHTFVRCY-------GLASPCIIGCAYVPSGGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQR--PHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNV 3668
K + + + NV G++ K L +LE+ I LQET LT I GY + V RGL + +KN +G + + + + ++ C G +I A++PS + K ++ I RR + + + I++MGD N + + R + + G+R + K R IDH+ + + +++ VD+SDH PL + + + + + + I+I + L NH++ + + +L +++G D A ++ +++ + + ++ K+ + I+ R K++ +K + T A K A R+D +K + ++ A + +P+ W++ A KR + S P+ ++ G + W H+E LA DV+GNS+ D KW QR + D+ IT ++ A+ +KA G DG+P++ KL + ES ++K L+ +L MW IPE + S +V IPKKGD D NNYRGISL+ T++K+L I++ +LNE ++NL QAGFR +EECV+QA L E+ +RRK++ T++ F+D KAYD VPHEAL +KL + G + I LY + RI VR G+ S F RGVRQGCP SP+LF++FINDIL+ + + +P ++ GLLFADD V A + + L +R+++W ++ EM KCGV+ IG ST+ + + + +P V+EY YLG++FN K + + N A +R +S M FL + P+ +R ++R VI+P +G E++GM ++ +++Q ++ A RL+ G G + A++ +
Sbjct: 459 KSSGTRCFSYNVQGIKGIKDQLEFVLEKYQPTLICLQETMLTEKSSRCMIHGYTSVEVKTNIRRGGRGLLVAVKNDLGIK-INEMESFPNWMACEISGKYKDGNKFESVIVNAHIPSDPKRRKIVVKQISVFCRRKKNKNNKMPILMMGDLNMDTLKSLSFSNRIGIGFQRANVFNST---GSRMNKGKIGRMIDHLFYCGIKSKPVFAK--ILKSVDLSDHLPLFAEWN-------------------IQELKPQPKNIKINTSKL----------------LNHKKNIINNNRFAVLANMKDGIDD------------HAKKIYGNIWKMCEENGYLSSQKSKKFGLFSDKTIKLIEKRRKLFLGYQKGECNLERYTTA-------KNDAVDSRREDYKKKSNREIKKACKLYLENNPRFLWRWLKYQA--KRFNASSIDGPIFDRHRNIVTDGL-EKEKVWADHFEELAKDVSGNSKCAD---KWGEIEQRHNEYYEECDKNITWDDIRRAIKVTPNNKAPGIDGIPSELWKLVQEEKNPESYLSKLLVELLLKMWNSAHIPEIFNTSIIVPIPKKGDPRDTNNYRGISLIPTLVKILAKIVAQKLNELDFKYNLLVKEQAGFRSREECVSQATVLYEVVRRRKIKGIPTWIGFIDFAKAYDRVPHEALLSKLKSQKIGGQLHRVISALYKSPRICVRVGNSISRKFEYSRGVRQGCPASPMLFDLFINDILENIKGINIPTINK------KIKGLLFADDAVVFADSPSELQIAFERVSEWAEKWEMQVNASKCGVIGIGQSTKMI------FMMQNGIVPQVKEYKYLGVMFNDKWNHVSAIKNNAEAASRAISGMYYFLENNKTPIAIRATLIRSVIIPIATYGGEIFGMSQSRINKLQKVVDLASRLIIGAGKAVALTRL 1307
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Match: A0A1R1YD24_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YD24_9FUNG) HSP 1 Score: 325 bits (834), Expect = 1.800e-91 Identity = 241/791 (30.47%), Postives = 378/791 (47.79%), Query Frame = 3
Query: 1308 LREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNV 3668
LR + +D I+L GDFN+ L R ++ M K + + G R IDH+ ++ +P +V++ VD+SDH P+++ + + D+ T I V + +E G+ V + L +L E ++++L + + + ++ A+ K+ + L + I+ R K ++R GD Y + K+ + L R DRR ++ A + + W + +G R G P+ + D L+T + W TH+E LA D TGNSRS D+W P D P++ E+ +AL +K+ G DG+P++ KL + SP AK I+N +W + +P++ S VV IPKKGD+ D NNYRGISL+ T+ KV+ I++ RL ++ + + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ + I LY + ++ VR GD S+ GVRQGCP SP+LF+I+IND+L G + GV + G + +SGLLFADD V +A + + L ++++ W Q+ EM KCG+M I T L + + G + V Y YLG+VFN K + + N G + +M FL + IP MR A++R V++P L +G E++GM +Q + A RLVAGVG S A+ +
Sbjct: 1 LRTKRRKDKIILAGDFNKNTDSTVALLNRIGVGLRRAMVTNSKGSRMNGATMG--RMIDHISFSGLINNPN----YAKVLKSVDLSDHLPVMAEWNIEALDSPT-----APRKINVELIKEIGE-----------------------------SFVSKNRFAALAEL----ESNIEDL---------TSSLNNGIWESAEELNAIKIEKISISTVLSKETIKVINKRRKAFKR---LIGDPKT----LIEYRDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRELWSWLKRFSGRFRSSLIDG--PIYNNDN-KLITDTNAKAEVWATHFEELAKDSTGNSRSADKWENIGTIPAV--FPECDAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEKEPTSPFAKVTSRIINGIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGDKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EATISGLLFADDAVVLAESPSELQIALEKISAWSQKWEMQINQEKCGIMGINSCTGML------FTVMGKPIEQVTNYKYLGVVFNDKWNHLSALQNNRENGRKAFHSMYYFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAVRLVAGVGRSTALQRL 714 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1518.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1518.5.1 >prot_P-littoralis_Contig1518.5.1 ID=prot_P-littoralis_Contig1518.5.1|Name=mRNA_P-littoralis_Contig1518.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1139bp MELVSVNGFEQWRRVARTASPVLTPVAQPAPATDISGDEGGVPWRVVSRKback to top mRNA from alignment at P-littoralis_Contig1518:9588..14534+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1518.5.1 ID=mRNA_P-littoralis_Contig1518.5.1|Name=mRNA_P-littoralis_Contig1518.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4947bp|location=Sequence derived from alignment at P-littoralis_Contig1518:9588..14534+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1518:9588..14534+ >mRNA_P-littoralis_Contig1518.5.1 ID=mRNA_P-littoralis_Contig1518.5.1|Name=mRNA_P-littoralis_Contig1518.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3417bp|location=Sequence derived from alignment at P-littoralis_Contig1518:9588..14534+ (Pylaiella littoralis U1_48)back to top |