mRNA_P-littoralis_Contig151.35.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Match: A0A6H5JDB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB4_9PHAE) HSP 1 Score: 174 bits (441), Expect = 3.080e-48 Identity = 85/153 (55.56%), Postives = 99/153 (64.71%), Query Frame = 1
Query: 1 MQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAMLVKQGEGPEAREVMLWPATREVAG-----EKEQCMHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPGWELRAPKDVMEVIYHDECAWKEND 444
+Q +GFRWRRHRKCVY DGHNRPD + R YV M + T L K GEGPEA EV LWPA E AG E MHV+L GEC WEK HN TSG + E++ LW T R PA PLPPG+ L P++VMEV+YHDECA+K+ND
Sbjct: 129 LQDLGFRWRRHRKCVYADGHNRPDNIRRRMGYVTEMQEHQKRTVKLAKIGEGPEAEEVALWPAVFESAGGDPLGEGSTWMHVQLEGECGWEKQHNLRTSGKLEELPVDERLELWCTERQRVPAQPLPPGFRLLEPREVMEVVYHDECAYKQND 281
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 172 bits (437), Expect = 4.360e-47 Identity = 84/153 (54.90%), Postives = 98/153 (64.05%), Query Frame = 1
Query: 1 MQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAMLVKQGEGPEAREVMLWPATREVAG-----EKEQCMHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPGWELRAPKDVMEVIYHDECAWKEND 444
+Q +GFRWRRHR CVY DGHNRPD + R YV M + T L K GEGPEA EV LWPA E AG E MHV+L GEC WEK HN TSG + E++ LW T R PA PLPPG+ L P++VMEV+YHDECA+K+ND
Sbjct: 487 LQDLGFRWRRHRNCVYADGHNRPDNIRRRTGYVTEMQEHQKRTVKLAKIGEGPEAEEVALWPAVSESAGGDPLGEGSTWMHVQLEGECGWEKQHNLRTSGKLEELPVDERLELWCTERQRVPAQPLPPGFRLLEPREVMEVVYHDECAYKQND 639
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Match: A0A6H5K7H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7H4_9PHAE) HSP 1 Score: 120 bits (302), Expect = 2.020e-32 Identity = 61/116 (52.59%), Postives = 70/116 (60.34%), Query Frame = 1
Query: 1 MQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAMLVKQGEGPEAREVMLWPATREVAG-----EKEQCMHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWAT 333
+Q +GFRWRRH+KCVY DGHNRPD + R YV M + T L K GEGPEA EV LWPA E AG E MHV+L GEC WEK HN TSG + E++ LW T
Sbjct: 17 LQDLGFRWRRHQKCVYADGHNRPDNIRRRMGYVTEMQEHQKRTVKLAKIGEGPEAEEVALWPAVFESAGGDPLGEGSTWMHVQLEGECGWEKQHNLRTSGKLDELPVDERLELWCT 132
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 100 bits (250), Expect = 6.140e-22 Identity = 53/102 (51.96%), Postives = 61/102 (59.80%), Query Frame = 1
Query: 121 TSTAMLVKQGEGPEAREVMLWPATREVAG-----EKEQCMHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPGWELRAPKDVMEVI 411
T T L K GEGPEA EV LWPA E AG E MHV+L GEC WEK HN TSG + E++ LW T R PA PLPPG+ L P++VMEV+
Sbjct: 48 TLTCRLAKIGEGPEAEEVALWPAVFESAGGDPLGEGSTWMHVQLEGECGWEKQHNLRTSGKLEELPVDERLELWCTERQRVPAQPLPPGFRLLEPREVMEVV 149
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.550e-20 Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 223 MHVELAGECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLPPGWELRAPKDVMEVIYHDECAWKEND 444
MHV+L GEC WEK HN TSG + E++ LW T R PA PLPPG+ L P++VMEV+YHDECA+K+ND
Sbjct: 1 MHVQLEGECGWEKQHNLRTSGKLEELPVDERLELWCTERQRVPAQPLPPGFRLLEPREVMEVVYHDECAYKQND 74
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Match: A0A6H5K230_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K230_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 3.100e-10 Identity = 39/107 (36.45%), Postives = 50/107 (46.73%), Query Frame = 1
Query: 10 VGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVR--------TSTAMLVKQGEGPEA--------------------REVMLWPATREVAGEKEQCMHVELAGE 246
+GFRW++ KCVYVDGHNRPDVVE R+ YV ML +R T + + + PE + + WPA R A KE HV + GE
Sbjct: 64 LGFRWKKSGKCVYVDGHNRPDVVEARREYVAKMLILRKMMSIPVQVETVTMARVRDAPEGGXXXXXXXXXXXVVEGWATGSDPLFWPAVRSTANGKEDVNHVLVHGE 170
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 3.210e-10 Identity = 40/107 (37.38%), Postives = 54/107 (50.47%), Query Frame = 1
Query: 1 MQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVR--------TSTAMLVK---QGEGPEA---------------REVMLWPATREVAGEKEQCMHVELAG 243
+ +GFRWRRH KCVYVDGHNRPDVVE R+ Y + M +R T ++VK EG E+ +E +LWP R++ + HV + G
Sbjct: 543 ISQLGFRWRRHGKCVYVDGHNRPDVVEARRLYTEKMFVMRRIISIPEKVETVVMVKVRDAEEGEESAMGDSDGSITGLAAGKEPVLWPVVRKMPDGRVDSKHVLVYG 649
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Match: A0A6H5L796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L796_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 3.330e-10 Identity = 39/104 (37.50%), Postives = 52/104 (50.00%), Query Frame = 1
Query: 10 VGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAMLV-----KQGEGPEA--------------------REVMLWPATREVAGEKEQCMHVELAGE 246
+GFRW++ KCVYVDGHNRPDVVE RQ YV ML +R ++++ + + PE + + WPA R A KE HV + GE
Sbjct: 110 LGFRWKKSGKCVYVDGHNRPDVVEARQEYVAKMLILRKMMSIVLXVTMARVRDAPEGGXXXXXXXXXXXVVEGWATGSDPLFWPAVRSTADGKEDVKHVLVHGE 213
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Match: A0A6H5JR89_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR89_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 5.710e-10 Identity = 57/176 (32.39%), Postives = 78/176 (44.32%), Query Frame = 1
Query: 10 VGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRT--STAMLVKQGEGP-----------------EAREVMLWPATREVAGEKE-QCMHVELA----GECDWEKFHNQTTSGVSGGMSDAEQVRLWATPPMRTPATPLP-------PGWELRAPKDVMEVIYHDECAWKEND 444
+GFRW++ KCVYVDGHNRPDVVE R+ YV ML +R S ++++ G+G + E + WPA R V GE E + +HV G+C K VS + R R P P + L +V+ + +HDE KEND
Sbjct: 501 LGFRWKKSGKCVYVDGHNRPDVVEARREYVAKMLILRKMMSIDLVMRDGKGDYSLVPDLQVRDLYVAKKKKEEALFWPARRIVDGETEYKHVHVHDGERPYGDCVRIK---PNALNVSHRCECRDCKRKPFDSSSRVPFNPRDLLGRDGRGDFCLVPDHEVLALYFHDETTAKEND 673
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 6.820e-9 Identity = 43/131 (32.82%), Postives = 59/131 (45.04%), Query Frame = 1
Query: 10 VGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVR--------TSTAMLVKQGEGPEAR-------------------EVMLWPATREVAGEKEQCMHVELAGECDWEKF-HNQTTSGVSGGMSDAEQV 318
+GFRWRRH KCVYVDGHNRPDVV+ R+ Y + M +R T ++VK + + E +LWPA R + HV + G+ E H++ + VS D E
Sbjct: 132 LGFRWRRHGKCVYVDGHNRPDVVQARRLYTEKMFVMRRLMSIPEKVETVVMVKVRDARDREKTSTDDRRDDNITAAVACAEPVLWPAVRTMPDGGVDFKHVLVYGDKFTEATGHDRCCTRVSVDAGDLEMT 262 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig151.35.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig151.35.1 >prot_P-littoralis_Contig151.35.1 ID=prot_P-littoralis_Contig151.35.1|Name=mRNA_P-littoralis_Contig151.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=148bp MQAVGFRWRRHRKCVYVDGHNRPDVVEHRQTYVQTMLAVRTSTAMLVKQGback to top mRNA from alignment at P-littoralis_Contig151:159436..160043- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig151.35.1 ID=mRNA_P-littoralis_Contig151.35.1|Name=mRNA_P-littoralis_Contig151.35.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=608bp|location=Sequence derived from alignment at P-littoralis_Contig151:159436..160043- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig151:159436..160043- >mRNA_P-littoralis_Contig151.35.1 ID=mRNA_P-littoralis_Contig151.35.1|Name=mRNA_P-littoralis_Contig151.35.1|organism=Pylaiella littoralis U1_48|type=CDS|length=444bp|location=Sequence derived from alignment at P-littoralis_Contig151:159436..160043- (Pylaiella littoralis U1_48)back to top |