mRNA_P-littoralis_Contig150.33.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Match: A0A6H5KDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP5_9PHAE) HSP 1 Score: 129 bits (323), Expect = 7.520e-33 Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 2
Query: 8 FEEMAGLLAVGVSTVKQWEREYRHKGHIALDVTGKYERRWILSLDDGLLVVIKQWIRTNSVKNGEPNMTAETFCEYLNTEILPQVAATATTDY 286
FEE A V ST ++WE YR KGHI +D GK+ERRWILSLD+GLLV+++QWIR NS+KNGEPNMTAE F EYLN ++LPQVA T T DY
Sbjct: 91 FEETAEFFEVASSTPREWELSYRTKGHIQVDQRGKHERRWILSLDEGLLVMVRQWIRVNSIKNGEPNMTAEGFREYLNKDVLPQVADTKTCDY 183
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Match: A0A6H5JVH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH8_9PHAE) HSP 1 Score: 125 bits (313), Expect = 5.940e-32 Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query: 8 FEEMAGLLAVGVSTVKQWEREYRHKGHIALDVTGKYERRWILSLDDGLLVVIKQWIRTNSVKNGEPNMTAETFCEYLNTEILPQVAATATTDY 286
FEE A V ST ++WE YR KGHI ++ GK+ERRWILSLD+GLLV+++QWIR N +KNGEPNMTAE F EYLN ++LPQVA T T DY
Sbjct: 317 FEETAEFFEVASSTPREWELSYRTKGHIQVNQRGKHERRWILSLDEGLLVMVRQWIRVNCIKNGEPNMTAEGFREYLNKDVLPQVADTKTCDY 409
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 126 bits (317), Expect = 7.680e-32 Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 2
Query: 8 FEEMAGLLAVGVSTVKQWEREYRHKGHIALDVTGKYERRWILSLDDGLLVVIKQWIRTNSVKNGEPNMTAETFCEYLNTEILPQVAATATTDY 286
FE+ A V ST+++WE YR KGHI +D GK+ERRWILSLD+GLLVV++QW+R NS K GEPNMTA++F EYLNT ILP+VA T T DY
Sbjct: 302 FEDTAEFFEVADSTLREWELSYRTKGHIQVDQKGKHERRWILSLDEGLLVVVRQWVRVNSTKKGEPNMTADSFREYLNTVILPEVAETKTADY 394
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Match: A0A6H5KFI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI8_9PHAE) HSP 1 Score: 120 bits (300), Expect = 3.200e-30 Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 2
Query: 8 FEEMAGLLAVGVSTVKQWEREYRHKGHIALDVTGKYERRWILSLDDGLLVVIKQWIRTNSVKNGEPNMTAETFCEYLNTEILPQVAATATTDY 286
FEE A L V V T+KQWE EYR KG I VTG++ RRWILSLD+GLL VI+ +IR N+VKNGEPNMTA+TFC+Y+N ILP++AAT Y
Sbjct: 41 FEESAEFLQVSVGTIKQWELEYRTKGRI---VTGRHARRWILSLDEGLLAVIRFYIRNNAVKNGEPNMTAQTFCDYINKVILPEIAATKANGY 130
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Match: A0A6H5JUL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL0_9PHAE) HSP 1 Score: 120 bits (302), Expect = 7.640e-30 Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 2
Query: 8 FEEMAGLLAVGVSTVKQWEREYRHKGHIALDVTGKYERRWILSLDDGLLVVIKQWIRTNSVKNGEPNMTAETFCEYLNTEILPQ 259
FEE A V ST+++WE YR KGHI +D GK+ERRWILSLD+GLLV+++QWIR NS+KNGEPNMTAE F EYLN ++LPQ
Sbjct: 221 FEETAEFFEVASSTLREWELSYRTKGHIQVDQRGKHERRWILSLDEGLLVMVRQWIRVNSIKNGEPNMTAEGFREYLNKDVLPQ 304
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Match: A0A6H5K534_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K534_9PHAE) HSP 1 Score: 110 bits (274), Expect = 9.700e-27 Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 2
Query: 8 FEEMAGLLAVGVSTVKQWEREYRHKGHIALDVTGKYERRWILSLDDGLLVVIKQWIRTNSVKNGEPNMTAETFCEYLNTEILPQ 259
FEE A V ST+++WE YR KGHI +D GK+ERRWILSLD+GLLV+++Q IR NS+KNGE NM AE F EYLN ++LPQ
Sbjct: 295 FEETAEFFEVAFSTLREWELSYRTKGHIQVDQRGKHERRWILSLDEGLLVMVRQSIRVNSIKNGERNMIAEGFREYLNKDVLPQ 378
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Match: A0A6H5JXQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ2_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 1.190e-19 Identity = 40/58 (68.97%), Postives = 51/58 (87.93%), Query Frame = 2
Query: 86 HIALDVTGKYERRWILSLDDGLLVVIKQWIRTNSVKNGEPNMTAETFCEYLNTEILPQ 259
++ +D GK+ER WILSLD+GLLV+++QWIR NS+KNGEPNMTAE F EYLNT++LPQ
Sbjct: 24 YLKVDQRGKHERLWILSLDEGLLVMVRQWIRVNSIKNGEPNMTAEGFREYLNTDVLPQ 81
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Match: A0A6H5JGM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGM4_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.830e-17 Identity = 47/93 (50.54%), Postives = 56/93 (60.22%), Query Frame = 2
Query: 8 FEEMAGLLAVGVSTVKQWEREYRHKGHIALDVTGKYERRWILSLDDGLLVVIKQWIRTNSVKNGEPNMTAETFCEYLNTEILPQVAATATTDY 286
FEE A V ST+++WE YR KGHI +D GK+ERRWILSLD+GLLV M +E F EYLN ++LPQVA T T DY
Sbjct: 253 FEETAEFFQVASSTLREWELSYRTKGHIQVDQRGKHERRWILSLDEGLLV-----------------MPSEGFHEYLNKDVLPQVADTKTCDY 328
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Match: A0A6H5JX52_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX52_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 4.690e-13 Identity = 31/81 (38.27%), Postives = 52/81 (64.20%), Query Frame = 2
Query: 47 TVKQWEREYRHKGHIALDVTGKYERRWILSLDDGLLVVIKQWIRT-NSVKNGEPNMTAETFCEYLNTEILPQVAATATTDY 286
TV++WER + +GHI + G+++R ++L LD+ +L K W R + G+ N TAE F +++NT+I+P++ A T DY
Sbjct: 317 TVREWERSFLARGHIKVSAAGRFQRNFLLGLDNSILTECKDWTRAWGGILKGQANKTAEDFRQFVNTDIMPKIEALMTPDY 397
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Match: A0A6H5JFH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFH8_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 3.710e-10 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 2
Query: 140 DDGLLVVIKQWIRTNSVKNGEPNMTAETFCEYLNTEILPQV 262
D+ LLV+++QWIR N +KNGEPNMTAE F EYLN ++LPQ+
Sbjct: 12 DEALLVMVRQWIRVNFIKNGEPNMTAEGFREYLNKDVLPQI 52 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig150.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig150.33.1 >prot_P-littoralis_Contig150.33.1 ID=prot_P-littoralis_Contig150.33.1|Name=mRNA_P-littoralis_Contig150.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=96bp SSFRGNGGSSGSGCKHRQAVGEGVPPQGPHRVGCHRQVRAAVDTEPGRRSback to top mRNA from alignment at P-littoralis_Contig150:121453..121955+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig150.33.1 ID=mRNA_P-littoralis_Contig150.33.1|Name=mRNA_P-littoralis_Contig150.33.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=503bp|location=Sequence derived from alignment at P-littoralis_Contig150:121453..121955+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig150:121453..121955+ >mRNA_P-littoralis_Contig150.33.1 ID=mRNA_P-littoralis_Contig150.33.1|Name=mRNA_P-littoralis_Contig150.33.1|organism=Pylaiella littoralis U1_48|type=CDS|length=288bp|location=Sequence derived from alignment at P-littoralis_Contig150:121453..121955+ (Pylaiella littoralis U1_48)back to top |