mRNA_P-littoralis_Contig150.31.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE) HSP 1 Score: 251 bits (640), Expect = 7.450e-74 Identity = 144/243 (59.26%), Postives = 175/243 (72.02%), Query Frame = 1
Query: 37 DPVLMEQMRKMLAEQDGXXXXXXXXXARDSAIDAEIVRSTAASLEAMKEGSKSNVGRIAYNTVLAAVAGAGEHICDPAHPXXXXXXXXXAPPQGAAASFTRRAERLGIRPNTYREAHVRMHNANLSIPPKEALDEGRYLWAERKTRSDATDRRVVDLATRYWHSDDISRASGDSGKILL--PSKAAGEEYHPRRQLMVSGDKAYRMFLEWAPYVALKAELLEEDETFTDPGRTTFLSTRCGCL 759
D VL E++R++L + A +A+DAE R+ AS+EA+K+ S SN+GR AYNTV+AA AGA +H CDP PXXXXXXXXX GA S T RA+ LG+R T+R A RMH + +IPP+EAL++GRYLWA RK RSD D RV+ LA R+WHSDDISRASGDSG + PSK AGEEYHPRRQLMV+GD+ + FL+W Y+ LKAELL ED +FTDPGRT FLSTRCGCL
Sbjct: 154 DDVLKEELRELLRVGE-----LGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAV-SLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCL 389
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 251 bits (640), Expect = 1.350e-72 Identity = 144/243 (59.26%), Postives = 175/243 (72.02%), Query Frame = 1
Query: 37 DPVLMEQMRKMLAEQDGXXXXXXXXXARDSAIDAEIVRSTAASLEAMKEGSKSNVGRIAYNTVLAAVAGAGEHICDPAHPXXXXXXXXXAPPQGAAASFTRRAERLGIRPNTYREAHVRMHNANLSIPPKEALDEGRYLWAERKTRSDATDRRVVDLATRYWHSDDISRASGDSGKILL--PSKAAGEEYHPRRQLMVSGDKAYRMFLEWAPYVALKAELLEEDETFTDPGRTTFLSTRCGCL 759
D VL E++R++L + A +A+DAE R+ AS+EA+K+ S SN+GR AYNTV+AA AGA +H CDP PXXXXXXXXX GA S T RA+ LG+R T+R A RMH + +IPP+EAL++GRYLWA RK RSD D RV+ LA R+WHSDDISRASGDSG + PSK AGEEYHPRRQLMV+GD+ + FL+W Y+ LKAELL ED +FTDPGRT FLSTRCGCL
Sbjct: 778 DDVLKEELRELLRVGE-----LGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAV-SLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCL 1013
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE) HSP 1 Score: 217 bits (552), Expect = 1.180e-63 Identity = 128/261 (49.04%), Postives = 160/261 (61.30%), Query Frame = 1
Query: 1 ERRADTIEMVRGDPVLMEQMRKML----AEQDGXXXXXXXXXARDSAIDAEIVRSTAASLEAMKEGSKSNVGRIAYNTVLAAVAGAGEHIC---DPAHPXXXXXXXXXAPPQGAAASFTRRAERLGIRPNTYREAHVRMHNANLSIPPKEALDEGRYLWAERKTRSDATDRRVVDLATRYWHSDDISRASGDSGKILLP-SKAAGEEYHPRRQLMVSGDKAYRMFLEWAPYVALKAELLEEDETFTDPGRTTFLSTRCGCL 759
ERR+ +++++ DPVLME++R ML AEQ A+ +AIDA R+ ASL+A+K+ S++G Y T LA AGAGEH C D HP P + S RA LGIR T+ +A RMHN N I PK A EG Y++ ERKTRSD T+ V+ LA +WHSDD+SRA+G+SGK + SK HPRRQLM GD +RMFLE Y+ALK+ LLE+D FTDPGRTTFLSTRCGCL
Sbjct: 131 ERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAA---------AKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCK-----PVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCL 377
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Match: A0A6H5K647_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K647_9PHAE) HSP 1 Score: 208 bits (529), Expect = 9.600e-63 Identity = 117/251 (46.61%), Postives = 154/251 (61.35%), Query Frame = 1
Query: 1 ERRADTIEMVRGDPVLMEQMRKMLAEQDGXXXXXXXXXARDSAIDAEIVRSTAASLEAMKEGSKSNVGRIAYNTVLAAVAGAGEHICDPAHPXXXXXXXXXAPPQGAAASFTRRAERLGIRPNTYREAHVRMHNANLSIPPKEALDEGRYLWAERKTRSDATDRRVVDLATRYWHSDDISRASGDSGKILLPSKAAGEEYHPRRQLMVSGDKAYRMFLEWAPYVALKAELLEEDETFTDPGRTTFLSTRCG 753
ERR+ +E+++ D VLME++R ML A+++A++A R+ ASL+A+K S S++G AY T LA AGAGEH C P P + SF RA+ LGIR T+ +A VRMHN N I P++A+ +G Y++ ERKTRSD T+ V+ LA +WHSDD+SRA + SK HPRRQLM GD+ +RMFLE Y+ALK LLE+D +FTDPGRTTFLSTRCG
Sbjct: 73 ERRSSALELIQKDHVLMERVRAMLGASAADQAA-----AKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCS--DPNLCHPGKRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRAKN----MYKESKKRDAPSHPRRQLMHKGDRVWRMFLESRRYLALKGRLLEQDSSFTDPGRTTFLSTRCG 312
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE) HSP 1 Score: 217 bits (552), Expect = 3.280e-61 Identity = 128/261 (49.04%), Postives = 160/261 (61.30%), Query Frame = 1
Query: 1 ERRADTIEMVRGDPVLMEQMRKML----AEQDGXXXXXXXXXARDSAIDAEIVRSTAASLEAMKEGSKSNVGRIAYNTVLAAVAGAGEHIC---DPAHPXXXXXXXXXAPPQGAAASFTRRAERLGIRPNTYREAHVRMHNANLSIPPKEALDEGRYLWAERKTRSDATDRRVVDLATRYWHSDDISRASGDSGKILLP-SKAAGEEYHPRRQLMVSGDKAYRMFLEWAPYVALKAELLEEDETFTDPGRTTFLSTRCGCL 759
ERR+ +++++ DPVLME++R ML AEQ A+ +AIDA R+ ASL+A+K+ S++G Y T LA AGAGEH C D HP P + S RA LGIR T+ +A RMHN N I PK A EG Y++ ERKTRSD T+ V+ LA +WHSDD+SRA+G+SGK + SK HPRRQLM GD +RMFLE Y+ALK+ LLE+D FTDPGRTTFLSTRCGCL
Sbjct: 131 ERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAA---------AKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCK-----PVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCL 377
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Match: A0A6H5KLZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLZ5_9PHAE) HSP 1 Score: 186 bits (472), Expect = 9.140e-55 Identity = 112/185 (60.54%), Postives = 133/185 (71.89%), Query Frame = 1
Query: 4 RRADTIEMVRGDPVLMEQMRKMLAEQDGXXXXXXXXXARDSAIDAEIVRSTAASLEAMKEGSKSNVGRIAYNTVLAAVAGAGEHICDPAHPXXXXXXXXXAPPQGAAASFTRRAERLGIRPNTYREAHVRMHNANLSIPPKEALDEGRYLWAERKTRSDATDRRVVDLATRYWHSDDISRASGDS 558
RRAD +EMVR DPV E+MR ML Q +A+ AE R+ AASL A+K S+SN+GR+AY TVLAAVAGAGEH C P PXXXXXXXXX PQG SF +RAE LG+R T+R AHVRMH+ + +IPP +AL+EGRY W RKTRSDATD RV++LA R+WH DD+SRASGDS
Sbjct: 80 RRADVLEMVRKDPVSEEEMRTMLGVQGLEGV---------AAVHAENTRTMAASLAALKGKSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPXXXXXXXXXXEPQGGV-SFAQRAESLGVREKTFRAAHVRMHHTDHTIPPPQALEEGRYCWTTRKTRSDATDERVLELAIRFWHCDDVSRASGDS 254
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Match: A0A6H5KAT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT1_9PHAE) HSP 1 Score: 187 bits (476), Expect = 2.690e-54 Identity = 119/243 (48.97%), Postives = 146/243 (60.08%), Query Frame = 1
Query: 37 DPVLMEQMRKMLAEQDGXXXXXXXXXARDSAIDAEIVRSTAASLEAMKEGSKSNVGRIAYNTVLAAVAGAGEHICDPAHPXXXXXXXXXAPPQGAAASFTRRAERLGIRPNTYREAHVRMHNANLSIPPKEALDEGRYLWAERKTRSDATDRRVVDLATRYWHSDDISRASGDSGKILLPSKAAGEEYHPRRQLMVSGDKAYRMFLEWAPYVALKAELLEEDETFTDPGRTTFLSTRCGCLGG 765
D VL E++R++L + A +A+DAE +R+ AS+E +K S SN+GR AYNTV+AA AGA EH CDP PXXXXXXXXX QGA EAL++GRYLWA RK RSD D RV+ LA R+WH+ +S + + PSK AGEEYH RRQLMV+GD+ +R FL+W Y+ LKAELL ED +F DPGRT FLSTRCGCLGG
Sbjct: 154 DDVLKEELRELLCVGE-----LGEAAATKAAVDAENIRALVASIETLKLHSHSNIGRAAYNTVIAAAAGA-EHTCDPDDPXXXXXXXXXXXXQGA-----------------------------------EALEKGRYLWAPRKERSDKMDERVMGLARRFWHTAVLSYTLVGTKAMWRPSKKAGEEYHSRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFADPGRTLFLSTRCGCLGG 355
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Match: A0A6H5JE40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE40_9PHAE) HSP 1 Score: 182 bits (462), Expect = 2.820e-54 Identity = 86/124 (69.35%), Postives = 100/124 (80.65%), Query Frame = 1
Query: 394 MHNANLSIPPKEALDEGRYLWAERKTRSDATDRRVVDLATRYWHSDDISRASGDSGKILL--PSKAAGEEYHPRRQLMVSGDKAYRMFLEWAPYVALKAELLEEDETFTDPGRTTFLSTRCGCL 759
MH + +IPP+EAL++GRYLWA RK RSD D RV+ LA R+WHSDDISRASGDSG + PSK AGEEYHPRRQLMV+GD+ +R FL+W Y+ LKAELL ED +FTDPGRT FLSTRCGCL
Sbjct: 1 MHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCL 124
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Match: A0A6H5JG47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG47_9PHAE) HSP 1 Score: 181 bits (459), Expect = 3.000e-54 Identity = 85/126 (67.46%), Postives = 99/126 (78.57%), Query Frame = 1
Query: 394 MHNANLSIPPKEALDEGRYLWAERKTRSDATDRRVVDLATRYWHSDDISRASGDSGKILL--PSKAAGEEYHPRRQLMVSGDKAYRMFLEWAPYVALKAELLEEDETFTDPGRTTFLSTRCGCLGG 765
MH + +IPP+EAL++GRYLWA RK RSD D RV+ LA R+WHSDDISRASGDSG + PSK AGEEYHPRRQLMV+GD+ +R FL+W Y+ LKAELL ED +F DPGRT FLSTRCGC G
Sbjct: 1 MHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFADPGRTLFLSTRCGCFSG 126
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Match: A0A6H5K614_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K614_9PHAE) HSP 1 Score: 184 bits (467), Expect = 4.590e-54 Identity = 118/217 (54.38%), Postives = 145/217 (66.82%), Query Frame = 1
Query: 4 RRADTIEMVRGDPVLMEQMRKMLAEQDGXXXXXXXXXARDSAIDAEIVRSTAASLEAMKEGSKSNVGRIAYNTVLAAVAGAGEHICDPAHPXXXXXXXXXAPPQGAAASFTRRAERLGIRPNTYREAHVRMHNANLSIPPKEALDEGRYLWAERKTRSDATDRRVVDLATRYWHSDDISRASGDS-----GKI-LLPSKAAGEEYHPRRQLMVSGDK 636
RRAD +EMVR DPVL E+MR +L Q +A AE R+ AASL A+K S+SN+GR+AY TVLAAVAGAGEH C P PXXXXXXXXX PQG SF +RAE LG+R T+R AHVRMH+ + +IPP +AL+EGRY W RKTRSDATD V++LA R+WH DD+SRASGDS G+ P + G E R ++ +GD+
Sbjct: 24 RRADVLEMVRKDPVLEEEMRTVLGVQGLEGV---------AAAHAENTRAMAASLAALKGKSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPXXXXXXXXXXEPQGGV-SFAQRAESLGVREKTFRAAHVRMHHTDHTIPPPQALEEGRYCWTTRKTRSDATDEHVLELAIRFWHCDDVSRASGDSPVHGGGEPGQRPRSSLGVEPADSRVVVAAGDE 230 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig150.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig150.31.1 >prot_P-littoralis_Contig150.31.1 ID=prot_P-littoralis_Contig150.31.1|Name=mRNA_P-littoralis_Contig150.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=248bp MVRGDPVLMEQMRKMLAEQDGGAAAAAAAAARDSAIDAEIVRSTAASLEAback to top mRNA from alignment at P-littoralis_Contig150:115931..116883+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig150.31.1 ID=mRNA_P-littoralis_Contig150.31.1|Name=mRNA_P-littoralis_Contig150.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=953bp|location=Sequence derived from alignment at P-littoralis_Contig150:115931..116883+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig150:115931..116883+ >mRNA_P-littoralis_Contig150.31.1 ID=mRNA_P-littoralis_Contig150.31.1|Name=mRNA_P-littoralis_Contig150.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=744bp|location=Sequence derived from alignment at P-littoralis_Contig150:115931..116883+ (Pylaiella littoralis U1_48)back to top |