mRNA_P-littoralis_Contig15.53.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.53.1 vs. uniprot
Match: Q8QNI6_ESV1K (EsV-1-91 n=2 Tax=root TaxID=1 RepID=Q8QNI6_ESV1K) HSP 1 Score: 701 bits (1810), Expect = 1.260e-248 Identity = 361/553 (65.28%), Postives = 440/553 (79.57%), Query Frame = 1
Query: 1 MSVNRLSDLGTSLSRVDGVHKKYLNLSSAERNKVLFPNSADTELSFDEQSNVLGMKILNFEMPHTRYAIDRNVNSLYLSEKWGEDEYHFYSLRVSTGGYSIQSLSAAMELSCRCPVLLSGDKAMGNTYSFNATSLFGKVGFVSSGDYDFTIHAAFETVTLTSITADSATEATVSFFASYGEMFKPGALLTLKAYNYPDREVQVVETISDR---TVRLIGYFSDLDCETLSVSMSTMVPYSGQNSVARIMGLGESDLSGHSDFELLSIGSPFSASDDDLQNASVMLVTNFTTFISVGDYVRLSGIRGFMNDAVYQVSAVHDESHMEIYVDRSSLWSHESGRLADPSDPSVEWGVDAIDLSSVSNNLVELVCTLSSPTSLSTGDPVTFVGFDAEELSVVDAAVVHVDDTGSSVTVQFTYPTTYLLEDGVSSLSPVNPDTMIRTTYITPDRFDMSRGRRIALCRAIVDNQDVGSIHIPSLSARSFFGRIQLFSGAELVNFLSKDTAIGTHEFNSVLKRLNKIRLQFFNEDGTPYDFIGVDYTMFLELTCMDSNKGL 1650
MSVNR SDL TSLSR DGVH KYLNLSSA+R+K L+P+SAD EL+FD+QSNV+GMKILNFE+PHTRYAID N+LY+SEK GEDEY+FYS+RVS G +SIQ+L A+ LS +CPV+ +GD+ MGN Y+FN + LFGK+G VSSGDY++ IHA+ TVTL+SI +S TEA +SF A ++FKPGALL + Y Y DR+VQVVE VR+IG FSDLD E L VS+S MVPY+G NS+A+I+G GESDL+ ++ +LSIGSPFS S+D L++ASVM+ + F+S GD RLSG+ GFMND V V+ VHDE+H+E+YV+R++LWSHE+G LA+ SDP VEWGV I LS V +N VE+V T SSPT+LS GD V F GF +EE ++A V VD+ +TVQF YPT L EDGV+SLSPVNP+T + TTYI P+RFD+SRGRR+ LCRAIVDNQDVGSIHIPSLS RSFFGRIQLFSGA LVNFL KDTA+G+HEFNSV+KR+NKIR QF+NE+GT YDFIGVDYTMFLEL C+DSNKGL
Sbjct: 1 MSVNRRSDLDTSLSRTDGVHHKYLNLSSADRDKTLYPDSADAELTFDDQSNVIGMKILNFEIPHTRYAIDNTTNNLYISEKRGEDEYYFYSIRVSPGAHSIQNLCVALTLSSKCPVMFNGDRDMGNEYTFNTSLLFGKIGIVSSGDYEYIIHASTATVTLSSIIVNSDTEAVLSFLAPSDQVFKPGALLVFQPYTYSDRDVQVVENTESSGQSEVRVIGDFSDLDWENLDVSLSRMVPYAGVNSMAKIIGFGESDLADQANSGVLSIGSPFS-SNDTLEDASVMVSLDKAHFLSAGDSARLSGVPGFMNDMVCTVAVVHDETHVEMYVNRAALWSHEAGTLANLSDPGVEWGVTDISLSGVDSNAVEIVITPSSPTTLSAGDVVVFNGFHSEEFQDLNATAVLVDED-EGITVQFDYPTILLFEDGVTSLSPVNPETTLGTTYIAPNRFDLSRGRRMVLCRAIVDNQDVGSIHIPSLSTRSFFGRIQLFSGANLVNFLGKDTAVGSHEFNSVMKRINKIRFQFYNENGTTYDFIGVDYTMFLELVCLDSNKGL 551
BLAST of mRNA_P-littoralis_Contig15.53.1 vs. uniprot
Match: B5LWJ7_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWJ7_9PHYC) HSP 1 Score: 398 bits (1022), Expect = 1.320e-129 Identity = 227/534 (42.51%), Postives = 338/534 (63.30%), Query Frame = 1
Query: 67 YLNLSSAERNKVLFPNSADTELSFDEQSNVLGMKILNFEMPHTRYAIDRNVNSLYLSEKWGEDEYHFYSLRVSTGGYSIQSLSAAMELSCRCPVLLSGDKAMGNTYSFNATSLFGKVGFVSSGDYDFTIHAAFETVTLTSITADSATEATVSFFASYGEMFKPGALLTLKAYNYPDREVQVVETISDRTVRLIGYFSDLDCETLSVSMSTMVPYSGQNSVARIMGLGESDLSGHSD--FELLSIGSPFSASDDDLQNASVMLVTNFTTFISVGDYVRLSGIRGF-MNDAVYQ-VSAVHDESHMEIYVDRSSLWSHESG-RLADPSDPSVEWGVDAIDLSSVSNNLVELVCTLSSPTSLSTGDPVTFVGFDAE-ELSVVDAAVVHVDDTGSSVTVQFTYPTTYLLEDGVSSLSPVNPDTMIRTTYITPDRFDMSRGRRIALCRAIVDNQDVGSIHIPSLSARSFFGRIQLFSGAELVNFLSKDTAIGTHEFNSVLKRLNKIRLQFFNEDGTPYDFIGVDYTMFLELTCMDSNKGL 1650
+++LSSA R+K F +S D E++FD+ NV+G+++LNFE+PHTRYAID + N+LY+SEK G+D Y+F+ LR TGGY+I +L+ A+ELS + P++ + N+Y+F+A S GK+ +SSG + +H E ++L S T+++V F A + + PGA+LTLK YNY DREVQV ET RTV ++G FS D ET + S +VPYS ++ +G G +DL+ D F++L SPFS + D S +++ F F+S GD+V LSG F + D V+ V + +D++H++I +D + L+ G ++A PS + V I L +V +NLV + + S ++ GD V GF++ ELS V V T FTYPT E+ +SP+ +T + TT+++P RFD+S+GRR+ LCR VD +D+G+ HI + S +FFGRIQLFSGA+LVNFLS+ A+G H+F S++KRL +R +F+NEDG+ Y F GVDYT+FL++ + SN GL
Sbjct: 6 FVSLSSASRDKNAFTSSDDCEINFDDIVNVVGIELLNFEVPHTRYAIDDSDNTLYISEKVGDDVYNFFGLRAGTGGYTISNLAVALELSQKTPIVYNAGTVPLNSYNFSAASSVGKLAIISSGLLPYNVHVCKEVLSLVKFEKISDTKSSVQFIAPFEYILAPGAMLTLKLYNYTDREVQVTETTGPRTVTVLGDFSG-DFETDVSTSSELVPYSSSQNICETLGFGLTDLASDVDTKFDVLGFQSPFSCTVDSENLVSPRVLSKFPIFVSPGDHVVLSGSESFGIADGVHATVVSTYDDTHLDISIDPNRLFDSSGGLQVASVDSPSETFTVSEIGLDTVEDNLVTIRVSTSEASNYGEGDEVYITGFESSSELSSTVFQVQSVAPEDLEFTCTFTYPTLPPPENLSMKISPICDETGVPTTFVSPHRFDLSKGRRVMLCRVSVDGKDLGTTHIQN-SRVTFFGRIQLFSGADLVNFLSRHQAVGRHDFPSLVKRLRSLRFRFYNEDGSEYRFEGVDYTVFLKIATLHSNTGL 537
BLAST of mRNA_P-littoralis_Contig15.53.1 vs. uniprot
Match: Q6XM57_9PHYC (FirrV-1-A30 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM57_9PHYC) HSP 1 Score: 386 bits (991), Expect = 8.610e-125 Identity = 224/534 (41.95%), Postives = 329/534 (61.61%), Query Frame = 1
Query: 67 YLNLSSAERNKVLFPNSADTELSFDEQSNVLGMKILNFEMPHTRYAIDRNVNSLYLSEKWGEDEYHFYSLRVSTGGYSIQSLSAAMELSCRCPVLLSGDKA-MGNTYSFNATSLFGKVGFVSSGDYDFTIHAAFETVTLTSITADSATEATVSFFASYGEMFKPGALLTLKAYNYPDREVQVVETISDRTVRLIGYFSDLDCETLS-VSMSTMVPYSGQNSVARIMGLGESDLSGHSD--FELLSIGSPFSASDDDLQNASVMLVTNFTTFISVGDYVRLSGIRGFMN-DAVYQVSAVHDESHMEIYVDRSSLWS-HESGRLADPSDPSVEWGVDAIDLSSVSNNLVELVCTLSSPTSLSTGDPVTFVGFDAEELSVVDAAVVHVDDTGSSVTVQFTYPTTYLLEDGVSSLSPVNPDTMIRTTYITPDRFDMSRGRRIALCRAIVDNQDVGSIHIPSLSARSFFGRIQLFSGAELVNFLSKDTAIGTHEFNSVLKRLNKIRLQFFNEDGTPYDFIGVDYTMFLELTCMDSNKGL 1650
YL+LSSA R+K F +S D E++FD+ NV+G++++NFE+PHTRYAID + NSLY+SE+ G+ YHFY LR+ TGGY+I +L ++ELS + + +GD + N+YS A+ GKV VSSG + IH ET+T+T + A VSF A Y + PGA+L LK + + DREVQV+ T RTV L G F+DL ETL STMVPYS +V+ +GLG++DL D FE+L + SP + S+ ++ +F F+S GD V +S ++ Y VS+ +D++H +IYVD ++L E L SD S V I ++ + NN V ++ T G+ V G + E++ + + V+ +T FTYP + + +D +S +SP N T TTY++P RFD+S+GRR+ LCRA +D +D+G+ HI S FFGRIQL SGA++VNFLS A+G H F S++K+L+++R +F+NE+GT Y+F GVDYT+ L++T + SN G+
Sbjct: 25 YLSLSSASRDKNTFTSSDDCEIAFDDIHNVIGLELVNFEIPHTRYAIDSDNNSLYISEQVGDQLYHFYGLRLGTGGYTISNLCTSLELSQQAAMPYNGDTTGLMNSYSIMASQSVGKVAIVSSGTVPYNIHVCTETLTVTHFDKQGDSSALVSFLAPYEYILAPGAMLMLKLHTHLDREVQVIATEGARTVELFGDFTDLTTETLDGTDSSTMVPYSSFQNVSDTLGLGDTDLVSDVDTAFEVLGVQSPIATSNP-------RILVDFPIFVSPGDSVSISDSSSMLDLGGPYTVSSTYDDTHFDIYVDANTLLDVDEDTDLQITSDKSTFSSVSDISITGIDNNTVTVLIQTFEVTDYGVGETVYLTGLSSPEMTDRELNLTSVNSASLQLTATFTYPVSAINKDTMS-ISPCNAATGHPTTYVSPHRFDLSKGRRMMLCRASIDGRDLGTTHIQD-SRTVFFGRIQLLSGADMVNFLSAHQAMGRHRFTSLVKKLHRLRFRFYNENGTEYNFEGVDYTVLLKITTLYSNTGV 549 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.53.1 >prot_P-littoralis_Contig15.53.1 ID=prot_P-littoralis_Contig15.53.1|Name=mRNA_P-littoralis_Contig15.53.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=551bp MSVNRLSDLGTSLSRVDGVHKKYLNLSSAERNKVLFPNSADTELSFDEQSback to top mRNA from alignment at P-littoralis_Contig15:144933..146585- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.53.1 ID=mRNA_P-littoralis_Contig15.53.1|Name=mRNA_P-littoralis_Contig15.53.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1653bp|location=Sequence derived from alignment at P-littoralis_Contig15:144933..146585- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:144933..146585- >mRNA_P-littoralis_Contig15.53.1 ID=mRNA_P-littoralis_Contig15.53.1|Name=mRNA_P-littoralis_Contig15.53.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1653bp|location=Sequence derived from alignment at P-littoralis_Contig15:144933..146585- (Pylaiella littoralis U1_48)back to top |