mRNA_P-littoralis_Contig15.46.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.46.1
Unique NamemRNA_P-littoralis_Contig15.46.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Match: Q8QNH5_ESV1K (EsV-1-103 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNH5_ESV1K)

HSP 1 Score: 336 bits (861), Expect = 9.320e-108
Identity = 272/471 (57.75%), Postives = 305/471 (64.76%), Query Frame = 1
Query:    1 RVMPTAPNEKGIVDAMKSMRAIVDKNKVGKKQILGTATGFPLPPVDFVGSAQAADPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMIT------PDTNGQLFGTLLNSVKTRPVGSLDSAKDNATTGVKATAVKKNVKKNTKGRGLPSPSSSYTXXXXXXXXXXNSSITSRDTVCSSSVTGTSDSTRSTQSSQECSSVQTDRLVREKKKRRGELLHEKVEMLTRIANLSKNGFTATKKWDVKDDIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLGGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHAGNAIGRQSGQSGQQRDEHGESKGSXXXXXXXVLSMMGMLNGRS-SASDNPS--RSAPPARAT------DPLPGEHESRTKRKTMRGPGSSSIPSSIF----DSQSTMPSMTLP 1356
            R M   PNEKGI++AMKSM+ I  K+   K  +      FP PP D +G+ ++   K        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  P +       PDTN QLFGTLLNS+KT PV  ++SA+         T   K+  K++K R          XXXXXXXXXX                               S  ++ +L  EKKKR+ ELLHEKVEMLTRIANLSKNGFT TKKWDVKDDIDEIRYECYRMQRESNSKKS+KIMRRVLVTITTLVETGNAYFNPFNLRL GFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQI+FTFMSAAIFHHAGNAIG       Q+RD     K S       V+SMMGM+N  S S  DN    RS PPA+ +      D   G    + KRKTMRGPG+ S+P SI      ++ T PSMTLP
Sbjct:   11 RRMANPPNEKGIMNAMKSMKTIAGKDSF-KGGLTPKTMAFPSPPKDLIGTMESTR-KTGPNVSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPSLXXXXXTKPDTNSQLFGTLLNSLKTGPVSQMNSARP--------TKTNKSSTKDSKFRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSYSSGEKSGKLKIEKKKRKEELLHEKVEMLTRIANLSKNGFTTTKKWDVKDDIDEIRYECYRMQRESNSKKSMKIMRRVLVTITTLVETGNAYFNPFNLRLDGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQILFTFMSAAIFHHAGNAIG-------QKRDGTSNKKRSTANPMSSVMSMMGMINANSASRGDNYPIPRSTPPAQTSTGSDSLDSGAGSAGGKPKRKTMRGPGALSMPDSILGVSNSNKQTTPSMTLP 464          
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Match: D8LPD4_ECTSI (EsV-1-103 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPD4_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 1.500e-104
Identity = 263/469 (56.08%), Postives = 298/469 (63.54%), Query Frame = 1
Query:    1 RVMPTAPNEKGIVDAMKSMRAIVDKNKVGKKQILGTATGFPLPPVDFVGSAQAAD---PKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMITPDTNGQLFGTLLNSVKTRPVGSLDSAKDNATTGVKATAVKKNVKKNTKGRGLPSPSSSYTXXXXXXXXXXNSSITSRDTVCSSSVTGTSDSTRSTQSSQECSSV-QTDRLVREKKKRRGELLHEKVEMLTRIANLSKNGFTATKKWDVKDDIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLGGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHAGNAIGRQSGQSGQQRDEHGESKGSXXXXXXXVLSMMGMLNGRSSASDN----PSRSAPPARAT-----DPLPGEHESRTKRKTMRGPGSSSIPSSIF----DSQSTMPSMTLP 1356
            R M + PNEKGI++AMKSM+ I  K+   K  +      FP PP D VG+ ++     P          XXXXXXXXXXXXXXXXXXXXXXXXX   XXXXX +  PDTN QLFGTLLNS+KT PV  ++S + + T                             XXXXXXXXXX                        + S   CSS  ++ +L  EKKKR+ ELLHEKVEMLTRIANLSKNGFT TK+WDVKDDIDE+RYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRL GFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQI+FTFMSAAIFHHAGNAIG       Q+RD     K S       V+SMMGM+N   ++  N    P  + PP  +T     D   G    + KRKTMRGPG+S +P SI      ++ T PSMTLP
Sbjct:   11 RRMASPPNEKGIMNAMKSMKTIAGKDSF-KDGLTPKTMAFPSPPRDLVGTMESTKKTRPNFSTKKNKKTXXXXXXXXXXXXXXXXXXXXXXXXXATPXXXXXXLTKPDTNSQLFGTLLNSLKTGPVSQMNSVRPSKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGS---CSSGGKSGKLKIEKKKRKEELLHEKVEMLTRIANLSKNGFTTTKQWDVKDDIDEVRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLDGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQILFTFMSAAIFHHAGNAIG-------QKRDGATNKKRSTANPMSSVMSMMGMINANGASRVNSYPMPRSTPPPQTSTGSESLDASAGSDGGKPKRKTMRGPGASMMPDSILGAGNSNKQTTPSMTLP 468          
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Match: B5LWB9_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWB9_9PHYC)

HSP 1 Score: 193 bits (491), Expect = 1.800e-54
Identity = 106/220 (48.18%), Postives = 143/220 (65.00%), Query Frame = 1
Query:  652 KRRGELLHEKVEMLTRIANLSKNGFTATKKWDVKDDIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLGGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHAGNAIGRQSGQSGQQRDEHGESKGSXXXXXXXVLSMMGMLNGRSSASDNPSRSAPPARATDPLPGEHESRTKRKTMRGPGSSSIPS 1311
            KR+ E+  EK+EML+R++ LS  GF+ATKKW + DDID+IR+ECYRM RESN++KS+K MR +L+T+ T+VE  N   NPFNL+L GFS++MML + DYDD  E++HHK+SGR+SVGPEM ++FTF+++AIFHHAGN +            + G S+ +       VLSM   L      S  PS SA     T   PG       R+ MRGP S+ + S
Sbjct:  112 KRKEEIAQEKIEMLSRVSRLSHEGFSATKKWSMNDDIDDIRFECYRMTRESNARKSVKTMRHILITLATVVEFANGMVNPFNLKLDGFSKNMMLTVSDYDDSLEELHHKWSGRTSVGPEMTVLFTFVTSAIFHHAGNVM--------TTPPQQGSSQAAKTATTPSVLSMFSRL-----MSPTPSVSAKKETGT-VNPGA------RRPMRGPSSNPLSS 311          
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Match: Q6XM14_9PHYC (FirrV-1-B22 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM14_9PHYC)

HSP 1 Score: 191 bits (484), Expect = 3.430e-53
Identity = 83/139 (59.71%), Postives = 115/139 (82.73%), Query Frame = 1
Query:  652 KRRGELLHEKVEMLTRIANLSKNGFTATKKWDVKDDIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLGGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHAGNAI 1068
            KR+ EL+ EK+EML+RI  LS+ GF A+KKW  KDD+D+IR+ECYRM RESN++KS+K M+ +L+T+ T++E  N+  NPFNLRL GFS ++ML + DYDD  EQ+HHK+SGR+S+GPE+ ++FTF+S+AIFHHAGN +
Sbjct:  131 KRKQELMQEKIEMLSRITRLSQEGFVASKKWSTKDDVDDIRFECYRMTRESNTRKSLKTMQHILITVATVIEFANSVVNPFNLRLEGFSRNLMLTVSDYDDSLEQLHHKWSGRTSLGPELSVLFTFVSSAIFHHAGNVM 269          
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Match: A0A6C0KZF6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KZF6_9ZZZZ)

HSP 1 Score: 107 bits (268), Expect = 7.390e-22
Identity = 70/224 (31.25%), Postives = 119/224 (53.12%), Query Frame = 1
Query:  664 ELLHEKVEMLTRIANLSKNGFTATKKWDVKDDIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLGGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHAGNAIGRQS--GQSGQQRDEHGE----SKGSXXXXXXXVLSMMGMLN--GRSSASDNPSRSAPPARATDPLPGEHESRTKRKTMRGPGSSSIPS 1311
            ELL EK EML R+  L + G   +KK+ +++D+DE++ E   +  E     S+K   +VL T+ T +E  N+ F+PF+++L G+SE +  N+DDYD+ F ++H KY  ++ + PE++++F   S+ I  H  N + + +  G     R         +K +          +   +N  G  +A+ NPS S PP R+    P    +   R+ M+GP S++I S
Sbjct:  153 ELLREKFEMLRRLETLEEKGANLSKKYSMENDLDEMKGEYEFLINEKEKSNSVKFQGKVLTTMITGLEFLNSKFDPFDIKLDGWSEQINENVDDYDEIFAELHEKYKSKAKMAPEIKLLFQLASSGIMIHMTNTMFKSALPGMDDIMRQNPDLMSQFTKAAMNSMEQNQPGLSNFMNDFGNGNAN-NPSSSVPPRRSQSQTPQPSTTSQMREEMKGPVSANIDS 375          
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Match: A0A6C0I7S9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0I7S9_9ZZZZ)

HSP 1 Score: 100 bits (249), Expect = 1.630e-19
Identity = 61/204 (29.90%), Postives = 107/204 (52.45%), Query Frame = 1
Query:  679 KVEMLTRIANLSKNGFTATKKWDVKDDIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLGGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHAGNAIGRQSGQSGQQRDEHGESKGSXXXXXXXVLSMMGMLNGRSSASDNPSRSAPPARATDPLPGEHESRTKRKTMRGP 1290
            K ++L +I  + K GF  +KK+++  + +E+ +E  ++++   S+ +IK  RR L+   T +E  N  F+PFN++L G+SE++M N+DDYD+ FE++H KY+G++ + PE++++ T   +A   H  N++         +    G            + SMMGM++       NP             P   E+R  RK M GP
Sbjct:  123 KQDLLIKIQAMEKKGFEFSKKFNMNSNYEEMMFEYEKVKKFIESQAAIKFSRRCLMACVTGLEFLNKKFDPFNVKLEGWSENVMENVDDYDNIFERLHEKYAGKAEIAPEIELLLTLGGSAFMFHLTNSL--------LKSPMMGSVNTVAQNNPNFMQSMMGMMSQGMKEMSNPKNVV-----QSNFPKPVETRGVRKEMNGP 313          
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Match: A0A6C0B0Y6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0B0Y6_9ZZZZ)

HSP 1 Score: 100 bits (250), Expect = 2.040e-19
Identity = 63/207 (30.43%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  679 KVEMLTRIANLSKNGFTATKKWDVKDDIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLGGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHAGNAIGR---QSGQSGQQRDEHGESKGSXXXXXXXVLSMMGMLNGRSSASDNPSRSAPPARATDPLPGEHESRTKRKTMRGP 1290
            K ++L +IA L K GF  TKK+++  + +E+ +E  ++++   S+  IK  RR L+   T +E  N  F+PFN++L G+SE++M ++DDYD+ FE++H KYS ++ V PE++++     +A   H  N++ +    S   GQ                   ++ MG    +   +  P +  PP           E+R  RK MRGP
Sbjct:  137 KQDLLIKIAALEKKGFEFTKKFNMTSNYEEMMFEYEKVKKFIESQAGIKFARRCLMACVTGIEFLNKKFDPFNIKLEGWSENVMESVDDYDNVFEKLHEKYSSKAEVAPEIELLLMLGGSAFMFHLTNSLLKGPTMSNLVGQNNPNFMAGMMGALSQGMKDMNKMGPQGMQQPMNQGPPKMPPPM----------ETRGVRKEMRGP 333          
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Match: A0A6C0BDZ2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BDZ2_9ZZZZ)

HSP 1 Score: 100 bits (248), Expect = 3.230e-19
Identity = 47/138 (34.06%), Postives = 87/138 (63.04%), Query Frame = 1
Query:  664 ELLHEKVEMLTRIANLSKNGFTATKKWDVKDDIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLGGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHAGNAIGRQ 1077
            ++ + K E+L +   L K G    KK+ +  ++DE+R E  R++R+ +   ++K  RR L+  T+ VE  N+ F+PF+++L G+SES+  N+ DYDD FE+++ KY G++ + PE++++F    +A   H  N++ +Q
Sbjct:  143 DVFNAKKELLYQFDRLEKKGMKLPKKFTMSSNLDEMRQEYERLKRDKDLDNAVKFQRRALMMFTSGVEFLNSKFDPFDVKLDGWSESVHENIVDYDDVFEELYDKYKGKAKMAPELKLLFALGGSAFMFHMTNSMFKQ 280          
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Match: E5EQA4_9PHYC (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=E5EQA4_9PHYC)

HSP 1 Score: 99.0 bits (245), Expect = 4.340e-19
Identity = 48/131 (36.64%), Postives = 82/131 (62.60%), Query Frame = 1
Query:  676 EKVEMLTRIANLSKNGFTATKKWDVKDDIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLGGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHAGNAI 1068
            EK ++L ++A L K GF   K+ +   ++DE+R E  R+    + ++SI+  RR+LV   T +E  N  +NPF ++L G+SES+M N+DDYD  FE+++ KY  + SV PE++++     +A+  H  N++
Sbjct:  113 EKADLLNKLARLEKKGFAVNKRLNAYSNVDELRSEVKRITYSIDVEQSIRFSRRMLVACVTGLEFLNKRYNPFEIQLDGWSESVMENVDDYDGVFEELYVKYRSKVSVAPEVKLIMMLGGSAMMFHLTNSM 243          
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Match: A0A6G6XQ00_9PHYC (Uncharacterized protein n=1 Tax=Dishui Lake phycodnavirus 4 TaxID=2704072 RepID=A0A6G6XQ00_9PHYC)

HSP 1 Score: 97.8 bits (242), Expect = 1.440e-18
Identity = 50/131 (38.17%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  676 EKVEMLTRIANLSKNGFTATKKWDVKDDIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRLGGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHAGNAI 1068
            EK ++L ++  L K GF   K+ +   DI E+R E  R+      ++SIK  RR+LV  TT +E  N  +NPF L+L G+SES+M N+DDYD  FE+++ KY  +  V PE++++     +A+  H  N++
Sbjct:  134 EKADLLNKLTRLEKKGFAINKRLNAYSDIQEMRSEYKRIMYGIEVEQSIKFSRRMLVACTTGLEFLNRRYNPFELQLEGWSESIMENIDDYDGVFEELYAKYRTKMHVAPEVKLLMMMGGSAMMFHLTNSM 264          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.46.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNH5_ESV1K9.320e-10857.75EsV-1-103 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPD4_ECTSI1.500e-10456.08EsV-1-103 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
B5LWB9_9PHYC1.800e-5448.18Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XM14_9PHYC3.430e-5359.71FirrV-1-B22 n=1 Tax=Feldmannia irregularis virus a... [more]
A0A6C0KZF6_9ZZZZ7.390e-2231.25Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0I7S9_9ZZZZ1.630e-1929.90Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0B0Y6_9ZZZZ2.040e-1930.43Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0BDZ2_9ZZZZ3.230e-1934.06Uncharacterized protein n=1 Tax=viral metagenome T... [more]
E5EQA4_9PHYC4.340e-1936.64Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A6G6XQ00_9PHYC1.440e-1838.17Uncharacterized protein n=1 Tax=Dishui Lake phycod... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:132353..133786 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog654926.Q8QNH5_ESV1K
Model size1365
Max annot lvl10239|Viruses
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.86e-108
EggNOG OGs4QH5P@10239|Viruses,4QZW0@35237|dsDNA viruses no RNA stage
Ec32 ortholog descriptionEsV-1-103
Ec32 orthologEc-06_005780.1
Cds size1359
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789710.614024-CDS-P-littoralis_Contig15:132352..1333131680789710.614024-CDS-P-littoralis_Contig15:132352..133313Pylaiella littoralis U1_48CDSP-littoralis_Contig15 132353..133313 -
1680789710.6289124-CDS-P-littoralis_Contig15:133382..1337801680789710.6289124-CDS-P-littoralis_Contig15:133382..133780Pylaiella littoralis U1_48CDSP-littoralis_Contig15 133383..133780 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789710.6419933-UTR-P-littoralis_Contig15:133780..1337861680789710.6419933-UTR-P-littoralis_Contig15:133780..133786Pylaiella littoralis U1_48UTRP-littoralis_Contig15 133781..133786 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.46.1prot_P-littoralis_Contig15.46.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 132353..133780 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.46.1

>prot_P-littoralis_Contig15.46.1 ID=prot_P-littoralis_Contig15.46.1|Name=mRNA_P-littoralis_Contig15.46.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=453bp
MPTAPNEKGIVDAMKSMRAIVDKNKVGKKQILGTATGFPLPPVDFVGSAQ
AADPKPKPKPKPEPKPKTNLKSRPEPKTKTKTKPTKRSPPPIPTPTPPMI
TPDTNGQLFGTLLNSVKTRPVGSLDSAKDNATTGVKATAVKKNVKKNTKG
RGLPSPSSSYTSFSPSPSPSSNSSITSRDTVCSSSVTGTSDSTRSTQSSQ
ECSSVQTDRLVREKKKRRGELLHEKVEMLTRIANLSKNGFTATKKWDVKD
DIDEIRYECYRMQRESNSKKSIKIMRRVLVTITTLVETGNAYFNPFNLRL
GGFSESMMLNLDDYDDCFEQIHHKYSGRSSVGPEMQIMFTFMSAAIFHHA
GNAIGRQSGQSGQQRDEHGESKGSGASPMSSVLSMMGMLNGRSSASDNPS
RSAPPARATDPLPGEHESRTKRKTMRGPGSSSIPSSIFDSQSTMPSMTLP
HS*
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mRNA from alignment at P-littoralis_Contig15:132353..133786-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.46.1 ID=mRNA_P-littoralis_Contig15.46.1|Name=mRNA_P-littoralis_Contig15.46.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1434bp|location=Sequence derived from alignment at P-littoralis_Contig15:132353..133786- (Pylaiella littoralis U1_48)
AGGGTAATGCCGACCGCACCAAACGAGAAGGGGATCGTGGATGCGATGAA GTCTATGCGCGCCATCGTGGACAAAAACAAGGTCGGCAAAAAACAAATCC TTGGAACAGCGACGGGTTTTCCCCTGCCCCCCGTGGACTTCGTGGGTAGC GCACAAGCAGCTGACCCCAAACCCAAACCCAAACCCAAACCCGAACCCAA ACCCAAAACCAACCTTAAATCCAGACCCGAACCCAAAACCAAAACCAAAA CGAAGCCCACGAAAAGGTCTCCTCCTCCGATTCCAACGCCAACACCGCCG ATGATCACGCCAGACACGAATGGTCAGCTCTTCGGGACTCTGTTGAATTC GGTCAAGACGCGCCCGGTCGGATCACTGGACTCCGCCAAGGACAACGCAA CAACGTACGCAAACGCAGCGCCACTGCGAACGCCACTGCGGACTCCACTG CGAAAGCCACTGCGATCAGCGAGGGGGGTAAAGGCCACAGCGGTGAAAAA AAACGTCAAGAAAAATACGAAAGGCCGGGGGCTGCCTTCGCCGTCGTCGT CATACACCTCTTTTTCTCCATCCCCATCCCCGTCTTCCAACTCTTCGATC ACGTCACGCGACACCGTGTGCTCGTCCTCCGTCACGGGGACTTCCGACTC GACGCGGTCGACACAGTCCTCGCAAGAATGCTCCTCCGTGCAGACAGACC GACTGGTGCGCGAGAAAAAGAAGCGAAGGGGGGAGCTCCTCCACGAAAAA GTAGAGATGCTCACGCGTATCGCGAATCTGTCCAAGAACGGGTTCACTGC AACCAAGAAGTGGGACGTCAAGGACGACATCGACGAGATTCGATACGAAT GTTACAGGATGCAGAGGGAAAGCAACTCCAAGAAGTCCATCAAGATCATG AGGCGCGTTCTTGTCACGATCACCACTCTCGTCGAGACCGGGAACGCCTA CTTCAATCCCTTCAACCTGAGGCTGGGGGGATTCTCCGAGAGCATGATGC TCAACCTCGACGACTACGACGACTGCTTCGAACAGATCCATCACAAGTAT TCTGGCAGATCTTCCGTTGGACCCGAGATGCAGATCATGTTCACGTTCAT GTCGGCTGCGATCTTCCACCACGCGGGAAACGCGATCGGCAGACAGAGCG GTCAAAGCGGTCAACAACGCGATGAACACGGGGAGTCCAAGGGTTCGGGC GCCAGCCCCATGTCGTCCGTCTTGAGCATGATGGGCATGCTCAACGGCAG GAGCTCTGCGAGCGACAACCCTAGCCGTTCGGCACCACCCGCTCGTGCCA CAGATCCCCTACCGGGGGAGCATGAATCAAGGACGAAAAGAAAAACTATG CGGGGGCCGGGATCGTCGTCGATACCCAGCTCGATTTTCGACAGCCAGTC GACAATGCCGTCCATGACCCTGCCACATAGCTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:132353..133786-

>mRNA_P-littoralis_Contig15.46.1 ID=mRNA_P-littoralis_Contig15.46.1|Name=mRNA_P-littoralis_Contig15.46.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1359bp|location=Sequence derived from alignment at P-littoralis_Contig15:132353..133786- (Pylaiella littoralis U1_48)
ATGCCGACCGCACCAAACGAGAAGGGGATCGTGGATGCGATGAAGTCTAT
GCGCGCCATCGTGGACAAAAACAAGGTCGGCAAAAAACAAATCCTTGGAA
CAGCGACGGGTTTTCCCCTGCCCCCCGTGGACTTCGTGGGTAGCGCACAA
GCAGCTGACCCCAAACCCAAACCCAAACCCAAACCCGAACCCAAACCCAA
AACCAACCTTAAATCCAGACCCGAACCCAAAACCAAAACCAAAACGAAGC
CCACGAAAAGGTCTCCTCCTCCGATTCCAACGCCAACACCGCCGATGATC
ACGCCAGACACGAATGGTCAGCTCTTCGGGACTCTGTTGAATTCGGTCAA
GACGCGCCCGGTCGGATCACTGGACTCCGCCAAGGACAACGCAACAACGG
GGGTAAAGGCCACAGCGGTGAAAAAAAACGTCAAGAAAAATACGAAAGGC
CGGGGGCTGCCTTCGCCGTCGTCGTCATACACCTCTTTTTCTCCATCCCC
ATCCCCGTCTTCCAACTCTTCGATCACGTCACGCGACACCGTGTGCTCGT
CCTCCGTCACGGGGACTTCCGACTCGACGCGGTCGACACAGTCCTCGCAA
GAATGCTCCTCCGTGCAGACAGACCGACTGGTGCGCGAGAAAAAGAAGCG
AAGGGGGGAGCTCCTCCACGAAAAAGTAGAGATGCTCACGCGTATCGCGA
ATCTGTCCAAGAACGGGTTCACTGCAACCAAGAAGTGGGACGTCAAGGAC
GACATCGACGAGATTCGATACGAATGTTACAGGATGCAGAGGGAAAGCAA
CTCCAAGAAGTCCATCAAGATCATGAGGCGCGTTCTTGTCACGATCACCA
CTCTCGTCGAGACCGGGAACGCCTACTTCAATCCCTTCAACCTGAGGCTG
GGGGGATTCTCCGAGAGCATGATGCTCAACCTCGACGACTACGACGACTG
CTTCGAACAGATCCATCACAAGTATTCTGGCAGATCTTCCGTTGGACCCG
AGATGCAGATCATGTTCACGTTCATGTCGGCTGCGATCTTCCACCACGCG
GGAAACGCGATCGGCAGACAGAGCGGTCAAAGCGGTCAACAACGCGATGA
ACACGGGGAGTCCAAGGGTTCGGGCGCCAGCCCCATGTCGTCCGTCTTGA
GCATGATGGGCATGCTCAACGGCAGGAGCTCTGCGAGCGACAACCCTAGC
CGTTCGGCACCACCCGCTCGTGCCACAGATCCCCTACCGGGGGAGCATGA
ATCAAGGACGAAAAGAAAAACTATGCGGGGGCCGGGATCGTCGTCGATAC
CCAGCTCGATTTTCGACAGCCAGTCGACAATGCCGTCCATGACCCTGCCA
CATAGCTGA
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