mRNA_P-littoralis_Contig15.38.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig15.38.1
Unique NamemRNA_P-littoralis_Contig15.38.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Match: Q8QNG3_ESV1K (EsV-1-116 n=4 Tax=root TaxID=1 RepID=Q8QNG3_ESV1K)

HSP 1 Score: 737 bits (1903), Expect = 4.160e-266
Identity = 365/425 (85.88%), Postives = 394/425 (92.71%), Query Frame = 1
Query:    1 MTLFKSQHKRYTNFAEDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLVEVTLPAIEAPASLLNASGEEVDAADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLQEQIGKFPYSADVEEDMIEFASKERKLYVPLPFWFNKYFMEHGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDNGDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFASVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKNLRRRYSVGHKDMFDFSL-KVESTVSPWGDVTDPVSSASLSLNGHNRFPSGLPGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQLELNYGANIPTSDVIVFNEAYNLLV 1272
            MTLFKSQHKRYTNFAEDFEENDFSAGTVGF QRVSANVSRYGDLVSDVL+EVTLPAI+A  S++N +G EV  ADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARL EQIGKF YSADVEEDMIEFAS+ERKLYVPLPFWFNKY+MEHGLSIPLIALTYHEIKIKVSFRP+ADCCAVVY+ ++    G++WAL+AD +P+NTASASA+AASDMDARLLVSYVYLDQEER+AFASV H+YLITT QRQ HSITSA+A SDQ+KLYFNHPSNAL+W +RPTDFKNLRRR+SVGHKDMFDFSL K ++TVS WGDVTD V+SASL+LNGH+RFP  LPGLFFRQVQPALKWPN P GY YLFTFAALGGVWNPTSTLNMSRIDHVQLEL YG NIPTSDVIVFNEAYNLLV
Sbjct:    1 MTLFKSQHKRYTNFAEDFEENDFSAGTVGFGQRVSANVSRYGDLVSDVLLEVTLPAIQASESVVNGAGTEVADADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLGEQIGKFAYSADVEEDMIEFASQERKLYVPLPFWFNKYWMEHGLSIPLIALTYHEIKIKVSFRPLADCCAVVYR-ESDPTWGDYWALAADKIPINTASASAMAASDMDARLLVSYVYLDQEERQAFASVQHEYLITTTQRQMHSITSASAKSDQLKLYFNHPSNALIWFVRPTDFKNLRRRFSVGHKDMFDFSLQKEDATVSMWGDVTDSVASASLTLNGHSRFPDSLPGLFFRQVQPALKWPNTPAGYTYLFTFAALGGVWNPTSTLNMSRIDHVQLELKYGDNIPTSDVIVFNEAYNLLV 424          
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Match: B5LWE8_9PHYC (Putative major capsid protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE8_9PHYC)

HSP 1 Score: 636 bits (1640), Expect = 9.940e-227
Identity = 307/424 (72.41%), Postives = 355/424 (83.73%), Query Frame = 1
Query:    1 MTLFKSQHKRYTNFAEDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLVEVTLPAIEAPASLLNASGEEVDAADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLQEQIGKFPYSADVEEDMIEFASKERKLYVPLPFWFNKYFMEHGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDNGDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFASVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKNLRRRYSVGHKDMFDFSLKVESTVSPWGDVTDPVSSASLSLNGHNRFPSGLPGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQLELNYGANIPTSDVIVFNEAYNLLV 1272
            MTLFK+ HKRYT+FAED EENDFSAGTVGF Q+VSANVSRYGDLV+D+ +EV LP IEA A++ NA G EV  ADKAAYWVNAIGYA+ISE++IEIGGTEVDTLY EWMF WE +TQRPGARL EQIGKF YSADVEEDMIEFA + R LYVPLPFWFNKYFME GLSIPLIALTYHEIK+KV+FRP+++CC VVY+ ++ +  GE++AL+    PVNT S S L +SDMDA+LL+SYVYLD+ ER+AFAS +H YLIT  QRQ H+ITSA + SDQIKLYFNHPSN L W +RPTD+   RRR+SVGH D FDFSL  +S VS WGDV DPV SASL+LNGH+RFP G+PGLFFRQ QP +KWPN   G++Y+F+F+  GG W PTSTLNMSRIDHVQLEL YG+NIPTSDV VF E+YNLLV
Sbjct:    1 MTLFKTVHKRYTSFAEDLEENDFSAGTVGFGQKVSANVSRYGDLVTDMFMEVALPPIEAAATVTNAEGVEVADADKAAYWVNAIGYALISEIQIEIGGTEVDTLYPEWMFFWESMTQRPGARLGEQIGKFAYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMETGLSIPLIALTYHEIKVKVTFRPLSECCCVVYRAED-ETHGEYFALAEGKTPVNTTSGSTLVSSDMDAKLLISYVYLDKAERDAFASTEHSYLITRTQRQLHAITSAGSASDQIKLYFNHPSNCLAWFVRPTDWTTNRRRFSVGHMDSFDFSLHTDSDVSVWGDVIDPVKSASLNLNGHSRFPDGMPGLFFRQTQPIMKWPNCSDGFMYVFSFSLQGGAWQPTSTLNMSRIDHVQLELKYGSNIPTSDVFVFAESYNLLV 423          
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Match: Q6XLY6_9PHYC (FirrV-1-B50 n=2 Tax=root TaxID=1 RepID=Q6XLY6_9PHYC)

HSP 1 Score: 627 bits (1616), Expect = 4.460e-223
Identity = 301/424 (70.99%), Postives = 357/424 (84.20%), Query Frame = 1
Query:    1 MTLFKSQHKRYTNFAEDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLVEVTLPAIEAPASLLNASGEEVDAADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLQEQIGKFPYSADVEEDMIEFASKERKLYVPLPFWFNKYFMEHGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDNGDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFASVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKNLRRRYSVGHKDMFDFSLKVESTVSPWGDVTDPVSSASLSLNGHNRFPSGLPGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQLELNYGANIPTSDVIVFNEAYNLLV 1272
            MTLFK+ H+R+T+FAED EENDFSAGTVGF Q+VSA +SRYGDLV+D+ +E+ LP IEA  ++ +ASG  V  ADKAAYWVNAIG+A+ISEV+IEIGGTEVD LY EWMF WEE+TQRPGARL EQIGKF YSADVEEDMIEFA + R LYVPLPFWFNKYFME GLSIPLIALTYHEIK+KV+FRP+++CC VVY+T++    GE++AL+   VPVN+ S S L +SDMDA+LLVSYVYLD++ER+AFA+ +H YLITT QRQ H+ITSA ++SDQIKLYFNHPSN L W +RPTD+   RRRYSVGH D+FD+SLK  S VS WGDVTDPV +ASL+LNGH+RFP  +PGLFFRQ QP +KWPN   GY+Y+F+F+  GG W PTSTLNMSRIDHVQLEL YG +IPTS+V VF E+YNLLV
Sbjct:    1 MTLFKTVHRRFTSFAEDLEENDFSAGTVGFGQKVSATISRYGDLVTDMFMEIHLPPIEAAVNVTDASGNTVADADKAAYWVNAIGFALISEVQIEIGGTEVDILYPEWMFFWEEMTQRPGARLGEQIGKFTYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMEAGLSIPLIALTYHEIKVKVTFRPLSECCCVVYRTEDPTH-GEYYALAEGKVPVNSTSGSTLVSSDMDAKLLVSYVYLDKKERDAFATTEHTYLITTTQRQMHAITSAGSSSDQIKLYFNHPSNCLTWFVRPTDWMTNRRRYSVGHMDLFDYSLKSTSDVSVWGDVTDPVKTASLTLNGHSRFPDNMPGLFFRQTQPIMKWPNCSNGYMYVFSFSLQGGSWQPTSTLNMSRIDHVQLELKYGTSIPTSNVFVFAESYNLLV 423          
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Match: A0A835Z3V1_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V1_9STRA)

HSP 1 Score: 360 bits (924), Expect = 4.010e-118
Identity = 194/435 (44.60%), Postives = 278/435 (63.91%), Query Frame = 1
Query:    4 TLFKSQHKRYTNFA--EDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLVEVTLPAIEAPASLLNASGEEVDA--ADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLQEQIGKFPYSADVEEDMIEFASKERKLYVPLPFWFNKYF-MEHGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDNGDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFASVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKNL--RRRYSVGHKDMFDFSLKVESTVSP-----WGDVTDPVSSASLSLNGHNRFPSGLPGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQLELNYGANIPTSDVIVFNEAYNLLV 1272
            T+FKS H R+T+FA  +DF+E      T GF    +A +SRYGDL+S + +E+ LPA++AP     ++G    A  A+  AY+VN IG+A+  +  +EIGG+ +D L+S++ F++EE+  R G RL+E +G+  +S  V++D+IE +S+E+ LYVPLP WF+KY     GL++P++AL++HEIK+K+  R IA+C +VVYK   GD     W LS D  P+N A+ +AL  SD+  RLLVSYVYLD  ER A +SV H  LI   QRQ  S+ + +    + KL+ NHP   L+W +RP D+     RRR+S G+KD FDFS + E +V P     WGD  D +++ASLSLNGH R+P+ +   +FR V P   W   P   IY ++FA     W PTS LN SR+DH+ L L + + I  S+++ F E+YNLLV
Sbjct:    1 TIFKSVHTRFTSFALDDDFQE----LSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGD-----WRLS-DLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLV 425          
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Match: A0A835Z566_9STRA (FirrV-1-B50 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z566_9STRA)

HSP 1 Score: 356 bits (914), Expect = 1.420e-116
Identity = 193/433 (44.57%), Postives = 276/433 (63.74%), Query Frame = 1
Query:    4 TLFKSQHKRYTNFAEDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLVEVTLPAIEAPASLLNASGEEVDA--ADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLQEQIGKFPYSADVEEDMIEFASKERKLYVPLPFWFNKYF-MEHGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDNGDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFASVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKNL--RRRYSVGHKDMFDFSLKVESTVS-----PWGDVTDPVSSASLSLNGHNRFPSGLPGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQLELNYGANIPTSDVIVFNEAYNLLV 1272
            T++KS H R+T+ A D E  + S  T GF    +A +SRYGDLVS + +E+ LP + AP     ++G    A  AD  A++VN IG+A   +  IEIGG+ VD L+S++ F++EEL  R G RL+E IG+ P+SADV+ED+IE +++E+ LYVPLP WF+KY     GL++P++AL++HEIK+K+  R IA+C +V+YK   GD     W LS D  P+N  + +AL  SDM  RLLVS+VYLD  ER A +SV H +LI   QRQ  ++ + + +  + KL+FNHP ++L+W +RP D+     RRR+S G+KD +DFS + + +V      PWGD  D +++ASLSLNGH R+P      +FR + P   W   P   IY ++FA     W PT+ LN SR +HV L L + A I  S++I   E+YNLL+
Sbjct:    1 TIWKSVHTRFTSCALDDEFQELS--TSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGD-----WRLS-DLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLI 425          
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Match: A0A835Z4S3_9STRA (Large eukaryotic DNA virus major capsid protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S3_9STRA)

HSP 1 Score: 358 bits (920), Expect = 2.080e-115
Identity = 190/430 (44.19%), Postives = 277/430 (64.42%), Query Frame = 1
Query:    4 TLFKSQHKRYTNFAEDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLVEVTLPAIEAPASLLNASGEEV--DAADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLQEQIGKFPYSADVEEDMIEFASKERKLYVPLPFWFNKYF-MEHGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDNGDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFASVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKNL--RRRYSVGHKDMFDFSLKVESTVS--PWGDVTDPVSSASLSLNGHNRFPSGLPGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQLELNYGANIPTSDVIVFNEAYNLLV 1272
            T+++S H R+T+ A D E  D S    GF+   SA ++RYGDL+S V +E+TLP + AP   +  +       AAD AA+WVN IG+A   +V++EIGG+ VD LYS++  ++EEL  RPG RL+E IG+  +S  V+ED+IE A K++ LYVPLP WF+KY    +GL++P++ALT+H+++IK+  R I++C  V+YK DN       W L+ + +P+N  + +AL  +D+  RL+V+ VYLD  ER A +SV H +LI+T QRQ HSI +  +   + KL+FNHP+++L+W +RP D+     RRR+S G +D +DF+    ST +  P+GD  DP+ +ASL+LNGH R+P+ +   +FR   P   W   P   IY ++FA     W PTS LN SR+DHV L   +  NI +S+   F EAYNLLV
Sbjct:  161 TIWRSVHTRFTSCAMDDEFQDLS--NSGFDTSSSATINRYGDLISRVTLEITLPPLAAPQVPITGTSPVTYHPAADTAAHWVNCIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEEAIGRVQFSDAVDEDLIEKAKKQQILYVPLPLWFSKYQPATYGLALPIVALTFHDVRIKIKTRSISECTCVLYK-DNAA-----WKLAENQIPLNANTGTALVNADLKIRLMVTSVYLDTTERTAMSSVVHSFLISTAQRQVHSIAANQSTKQEEKLFFNHPASSLIWFVRPLDWNTEAGRRRFSCGFRDRYDFTAHEASTDASLPYGDAVDPIRTASLTLNGHARWPTDMDSRYFRMHMPYCAWRTMPTTSIYTYSFALEAHQWQPTSHLNFSRLDHVSLGWTFCPNIKSSEAFSFVEAYNLLV 582          
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Match: A0A835ZBK3_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBK3_9STRA)

HSP 1 Score: 354 bits (908), Expect = 2.600e-115
Identity = 186/431 (43.16%), Postives = 278/431 (64.50%), Query Frame = 1
Query:    4 TLFKSQHKRYTNFAEDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLVEVTLPAIEAPASLLNASGEEVD--AADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLQEQIGKFPYSADVEEDMIEFASKERKLYVPLPFWFNKYF-MEHGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDNGDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFASVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKNL--RRRYSVGHKDMFDFSLKVESTVS---PWGDVTDPVSSASLSLNGHNRFPSGLPGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQLELNYGANIPTSDVIVFNEAYNLLV 1272
            T++++ H R+T+ A D E  + S    GF+   SA ++RYGDL+S V +E+ LP + AP   +  +    +   AD AAY+VN+IGYA   +V++EIGG+ VD LYS++  ++EEL  RPG RL+E IGK  YSA+V++D+IE AS+++ LYVPLP W +KY     GL++P++ALT+H+++IK+  RPIADC  V ++    D + + W L    +P+N  + + L  SD+  RL+++ VYLD  ER A +SV H +LI T QRQ  ++ +  ++  + KLY NHP +A+ W++RP ++     RRR+S G +D +DFS K   TV+   P+G+   P+++ASLSLNGH R+P  +P  +F   QP + W   P   I  ++FA     W PTSTLN SR+DHV L  N+ A +  S+++VF EAYNLLV
Sbjct:   27 TIWRAVHTRFTSCAMDDELQELS--NSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHR----DAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTVTSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLV 451          
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Match: A0A835Z0V5_9STRA (Putative major capsid protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V5_9STRA)

HSP 1 Score: 351 bits (901), Expect = 7.550e-115
Identity = 186/417 (44.60%), Postives = 265/417 (63.55%), Query Frame = 1
Query:   46 EDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLVEVTLPAIEAPASLLNASGEEVD---AADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLQEQIGKFPYSADVEEDMIEFASKERKLYVPLPFWFNKYFME-HGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDNGDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFASVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKNL--RRRYSVGHKDMFDFSLKVESTVSP--WGDVTDPVSSASLSLNGHNRFPSGLPGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQLELNYGANIPTSDVIVFNEAYNLLV 1272
            +DF+E        GF+   SA ++RYGDL+S + +E+ LP + AP   +  +   V    + D AA+WVNAIG+A   +V++EIGG+ VD LYS++  ++EEL  RPG RL+E IG+ PYSA+V+ D+IE A K + LYVPLP WF+KY    +GL++P++ALT+H++++K+  R IADC  VVYK D      + W L+ D  P+N ++ + L  +D+  RL+VS VYLD  ER A ++V H +LI T QRQ HSI +  +   + KLYFNHPS++L+W++RP D+     RRR+S G KD FDF+    S      +G+  DP+ S+SLSLNGH R+P+ +P  +FR   P   W   P   IY ++FA     W PTS LN SR+DHV L  ++   I +S+   F EAYNLLV
Sbjct:    3 DDFQE----LSNSGFDTSSSATINRYGDLISRITLEIRLPPLAAPQVPVVPATNPVTYYASEDTAAHWVNAIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEESIGRVPYSAEVDLDLIEKAQKAQILYVPLPLWFSKYQPSTYGLALPIVALTFHDVRLKIKTRSIADCTCVVYKED------DVWHLT-DLAPLNASTGTTLVNADLKIRLMVSSVYLDTTERTAMSTVTHSFLINTTQRQVHSIAAGQSTRQEEKLYFNHPSSSLIWIVRPLDWNTQAGRRRFSCGFKDRFDFTAYEASDDDSLIYGNAVDPIVSSSLSLNGHQRWPTDMPSTYFRTHVPYCNWRTLPSTSIYSYSFALEASAWQPTSHLNFSRLDHVSLGWSFAPGIKSSEAFSFVEAYNLLV 408          
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Match: A0A835ZCT3_9STRA (FirrV-1-B50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT3_9STRA)

HSP 1 Score: 346 bits (888), Expect = 4.670e-112
Identity = 194/433 (44.80%), Postives = 276/433 (63.74%), Query Frame = 1
Query:   13 KSQHKRYTNFAEDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLVEVTLPAIEAPASLLNASGEEVDA--ADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLQEQIGKFPYSADVEEDMIEFASKERKLYVPLPFWFNKYF-MEHGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDNGDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFASVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKNL---RRRYSVGHKDMFDFSLKVESTVSP-----WGDVTDPVSSASLSLNGHNRFPSGLPGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQLE--LNYGANIPTSDVIVFNEAYNLLV 1272
            ++ H R+T+ A D E  + S  T GF    +A +SRYGDLVS + +E+ LP + AP     +SG    A  AD AAY+VN+I +A   +V +EIGG+ VD L+S++ F++EEL  R G RL+E IG+ P+SADV+ED+ E +++E+ LYVPLP WF+KY     GL++P++AL++HEIK+K+  R IA+C +VVYK   GD     W LS D  P+N  + +AL  SDM  RLLVS+VYLD  ER A +SV H +LI   QRQ  ++ + + +  + KL+FNHP ++L+W +RP D+ NL   RRR+S G+KD FDFS + + TV       WGD  DP+++AS SLNGH R+P     ++FR + P   W   P   IY ++FA     W PT+ LNMSR+    L+  L + A I  S++I   E+YNLL+
Sbjct:   40 RAVHTRFTSCALDDEFQELS--TSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSSGAGAGAHYADTAAYYVNSIDFAAWEDVILEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLAEKSAREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDSAGD-----WRLS-DLAPINATTGTALVNSDMKLRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPQDW-NLEGGRRRFSCGYKDRFDFSHQEQGTVDATKGLAWGDTVDPITTASRSLNGHQRWPQDQNAVYFRVLTPYTSWRTMPTTNIYTYSFALQAQDWQPTAHLNMSRLKKTGLKNGLTFAAGIKASELIAMVESYNLLI 463          
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Match: A0A6C0CR61_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CR61_9ZZZZ)

HSP 1 Score: 221 bits (564), Expect = 4.460e-64
Identity = 145/404 (35.89%), Postives = 214/404 (52.97%), Query Frame = 1
Query:    1 MTLFKSQHKRYTNFAEDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLVEVTLPAIEAPASLLNASGEEVDAADKAAY--WVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARL--QEQIGKFPYSADVEEDMIEFASKERKLYVPLPFWFNKYFMEHGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDNGDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFASVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKNLRRRYSVGHKDMFDFSLKVESTVSPWGDVTDPVSSASLSLNGHNRFPSGLPGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQL 1200
            +T FK+ +KRYTNFA +  E  F+ G+  F +RVS  ++R GDL++   +++ LP       +L+ S   V +    AY  W NA+G+AII  VEIEIGG  +D  Y  W+ +W+ELTQ    ++   + +GK+      E  +I  ++ ER  Y+PL FWF K     G+S+PLIAL YHE+KI + FR ++D   VV    NG  + E    +  + P  T           +A+L V YVYLD +ER  FA  DH+YLI  +Q       + +  S ++KL FNHP   L+W+I+  +           + D F++S     T  P     D ++ A + LNG+ RF +  P  +FR VQP       P  +IYL++F+       P+ T NMSRID V +
Sbjct:   24 VTFFKTVYKRYTNFALEAIEQTFN-GSADFGKRVSCTIARNGDLINSTYLQIQLP-------ILSVSYLSVGSGPTPAYLCWCNAVGHAIIRYVEIEIGGQRIDRHYGLWLDIWDELTQTAEKKVGYSQMVGKY----QSELGLIGNSNYERIYYIPLQFWFCK---SPGMSLPLIALQYHEVKINIEFRTLSDL--VVALNANGSRVTETNYTTFSTTPSIT-----------NAQLYVDYVYLDTDERAKFAQNDHEYLIEQLQFTGSESLNFSQQSQKLKLNFNHPCKELIWVIQRDENATGN---GTAYNDWFNYSAAAPGTPIP-SQAVDLMADAKILLNGYERF-TVRPQTYFRLVQPYQHHTRIPEKHIYLYSFSLKPEEQQPSGTCNMSRIDTVYM 394          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNG3_ESV1K4.160e-26685.88EsV-1-116 n=4 Tax=root TaxID=1 RepID=Q8QNG3_ESV1K[more]
B5LWE8_9PHYC9.940e-22772.41Putative major capsid protein n=1 Tax=Feldmannia s... [more]
Q6XLY6_9PHYC4.460e-22370.99FirrV-1-B50 n=2 Tax=root TaxID=1 RepID=Q6XLY6_9PHY... [more]
A0A835Z3V1_9STRA4.010e-11844.60Putative major capsid protein n=1 Tax=Tribonema mi... [more]
A0A835Z566_9STRA1.420e-11644.57FirrV-1-B50 n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835Z4S3_9STRA2.080e-11544.19Large eukaryotic DNA virus major capsid protein-do... [more]
A0A835ZBK3_9STRA2.600e-11543.16Putative major capsid protein n=1 Tax=Tribonema mi... [more]
A0A835Z0V5_9STRA7.550e-11544.60Putative major capsid protein n=3 Tax=Tribonema mi... [more]
A0A835ZCT3_9STRA4.670e-11244.80FirrV-1-B50 n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A6C0CR61_9ZZZZ4.460e-6435.89Uncharacterized protein n=1 Tax=viral metagenome T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:121799..123070 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog654926.Q8QNG3_ESV1K
Model size1272
Max annot lvl10239|Viruses
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0019012
Exons1
Evalue6.82e-267
EggNOG OGs4QAX7@10239|Viruses,4QXNA@35237|dsDNA viruses no RNA stage
Ec32 ortholog descriptionEsV-1-116 Major Capsid Protein
Ec32 orthologEc-06_005670.1
DescriptionLarge eukaryotic DNA virus major capsid protein
Cds size1272
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789710.3305447-CDS-P-littoralis_Contig15:121798..1230701680789710.3305447-CDS-P-littoralis_Contig15:121798..123070Pylaiella littoralis U1_48CDSP-littoralis_Contig15 121799..123070 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.38.1prot_P-littoralis_Contig15.38.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig15 121799..123070 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig15.38.1

>prot_P-littoralis_Contig15.38.1 ID=prot_P-littoralis_Contig15.38.1|Name=mRNA_P-littoralis_Contig15.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=424bp
MTLFKSQHKRYTNFAEDFEENDFSAGTVGFNQRVSANVSRYGDLVSDVLV
EVTLPAIEAPASLLNASGEEVDAADKAAYWVNAIGYAIISEVEIEIGGTE
VDTLYSEWMFLWEELTQRPGARLQEQIGKFPYSADVEEDMIEFASKERKL
YVPLPFWFNKYFMEHGLSIPLIALTYHEIKIKVSFRPIADCCAVVYKTDN
GDGLGEFWALSADSVPVNTASASALAASDMDARLLVSYVYLDQEEREAFA
SVDHDYLITTIQRQSHSITSANANSDQIKLYFNHPSNALVWMIRPTDFKN
LRRRYSVGHKDMFDFSLKVESTVSPWGDVTDPVSSASLSLNGHNRFPSGL
PGLFFRQVQPALKWPNAPMGYIYLFTFAALGGVWNPTSTLNMSRIDHVQL
ELNYGANIPTSDVIVFNEAYNLLV
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mRNA from alignment at P-littoralis_Contig15:121799..123070-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig15.38.1 ID=mRNA_P-littoralis_Contig15.38.1|Name=mRNA_P-littoralis_Contig15.38.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1272bp|location=Sequence derived from alignment at P-littoralis_Contig15:121799..123070- (Pylaiella littoralis U1_48)
ATGACGCTCTTCAAGAGCCAGCACAAGCGGTACACGAACTTCGCGGAGGA CTTCGAGGAGAACGACTTCAGCGCGGGCACCGTGGGTTTCAACCAGCGCG TGTCGGCAAACGTGTCGCGCTACGGCGACCTCGTGAGCGACGTCCTCGTG GAGGTGACTCTCCCCGCCATCGAGGCGCCCGCGAGCCTGCTGAACGCGTC GGGCGAGGAGGTCGACGCCGCCGACAAGGCCGCGTACTGGGTGAACGCGA TCGGGTACGCCATCATCAGCGAGGTCGAGATCGAGATCGGAGGCACGGAG GTCGACACCCTGTACAGCGAGTGGATGTTCCTGTGGGAGGAGCTGACCCA GAGGCCCGGGGCTCGGCTCCAGGAGCAGATCGGAAAGTTCCCCTACTCGG CGGACGTGGAAGAAGACATGATCGAGTTCGCGAGCAAGGAGAGGAAGCTC TACGTTCCCCTCCCGTTCTGGTTCAACAAGTACTTCATGGAGCACGGCCT GTCGATCCCCCTGATCGCGCTGACCTACCACGAGATCAAGATCAAGGTCA GCTTCAGGCCCATCGCCGACTGCTGCGCCGTCGTCTACAAGACGGACAAC GGCGACGGCCTCGGCGAGTTCTGGGCGCTTTCCGCCGACAGCGTGCCCGT CAACACCGCGTCCGCCTCGGCGCTGGCGGCGTCCGACATGGACGCGCGCC TACTGGTGTCCTACGTCTACCTGGACCAGGAGGAACGCGAGGCCTTCGCG TCGGTCGATCACGACTACCTCATCACCACCATCCAGCGCCAGAGCCACTC CATCACCAGCGCGAACGCCAACTCGGATCAGATCAAGCTCTACTTCAACC ACCCTTCCAACGCGCTCGTGTGGATGATCCGCCCCACCGACTTCAAGAAC CTCAGGCGCCGCTACTCCGTCGGCCACAAGGACATGTTCGACTTCTCGCT CAAGGTCGAGTCCACCGTCAGCCCCTGGGGTGACGTTACCGACCCTGTAA GCTCGGCTTCACTGTCCCTGAATGGTCACAACCGTTTTCCGAGTGGTTTA CCCGGTCTGTTCTTCCGCCAGGTGCAGCCCGCGCTCAAGTGGCCGAACGC CCCGATGGGGTACATCTACCTGTTCACATTCGCTGCCCTCGGCGGCGTGT GGAACCCGACTTCCACTCTCAACATGAGCCGCATCGATCACGTGCAGCTC GAGCTCAACTACGGCGCCAACATCCCGACCTCCGATGTTATCGTCTTCAA CGAAGCCTACAACCTGCTGGTA
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Coding sequence (CDS) from alignment at P-littoralis_Contig15:121799..123070-

>mRNA_P-littoralis_Contig15.38.1 ID=mRNA_P-littoralis_Contig15.38.1|Name=mRNA_P-littoralis_Contig15.38.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1272bp|location=Sequence derived from alignment at P-littoralis_Contig15:121799..123070- (Pylaiella littoralis U1_48)
ATGACGCTCTTCAAGAGCCAGCACAAGCGGTACACGAACTTCGCGGAGGA
CTTCGAGGAGAACGACTTCAGCGCGGGCACCGTGGGTTTCAACCAGCGCG
TGTCGGCAAACGTGTCGCGCTACGGCGACCTCGTGAGCGACGTCCTCGTG
GAGGTGACTCTCCCCGCCATCGAGGCGCCCGCGAGCCTGCTGAACGCGTC
GGGCGAGGAGGTCGACGCCGCCGACAAGGCCGCGTACTGGGTGAACGCGA
TCGGGTACGCCATCATCAGCGAGGTCGAGATCGAGATCGGAGGCACGGAG
GTCGACACCCTGTACAGCGAGTGGATGTTCCTGTGGGAGGAGCTGACCCA
GAGGCCCGGGGCTCGGCTCCAGGAGCAGATCGGAAAGTTCCCCTACTCGG
CGGACGTGGAAGAAGACATGATCGAGTTCGCGAGCAAGGAGAGGAAGCTC
TACGTTCCCCTCCCGTTCTGGTTCAACAAGTACTTCATGGAGCACGGCCT
GTCGATCCCCCTGATCGCGCTGACCTACCACGAGATCAAGATCAAGGTCA
GCTTCAGGCCCATCGCCGACTGCTGCGCCGTCGTCTACAAGACGGACAAC
GGCGACGGCCTCGGCGAGTTCTGGGCGCTTTCCGCCGACAGCGTGCCCGT
CAACACCGCGTCCGCCTCGGCGCTGGCGGCGTCCGACATGGACGCGCGCC
TACTGGTGTCCTACGTCTACCTGGACCAGGAGGAACGCGAGGCCTTCGCG
TCGGTCGATCACGACTACCTCATCACCACCATCCAGCGCCAGAGCCACTC
CATCACCAGCGCGAACGCCAACTCGGATCAGATCAAGCTCTACTTCAACC
ACCCTTCCAACGCGCTCGTGTGGATGATCCGCCCCACCGACTTCAAGAAC
CTCAGGCGCCGCTACTCCGTCGGCCACAAGGACATGTTCGACTTCTCGCT
CAAGGTCGAGTCCACCGTCAGCCCCTGGGGTGACGTTACCGACCCTGTAA
GCTCGGCTTCACTGTCCCTGAATGGTCACAACCGTTTTCCGAGTGGTTTA
CCCGGTCTGTTCTTCCGCCAGGTGCAGCCCGCGCTCAAGTGGCCGAACGC
CCCGATGGGGTACATCTACCTGTTCACATTCGCTGCCCTCGGCGGCGTGT
GGAACCCGACTTCCACTCTCAACATGAGCCGCATCGATCACGTGCAGCTC
GAGCTCAACTACGGCGCCAACATCCCGACCTCCGATGTTATCGTCTTCAA
CGAAGCCTACAACCTGCTGGTA
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