mRNA_P-littoralis_Contig15.252.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig15.252.2
Unique Name	mRNA_P-littoralis_Contig15.252.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Match: D7FRT4_ECTSI (Nsp1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT4_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 2.450e-104
Identity = 184/227 (81.06%), Postives = 193/227 (85.02%), Query Frame = 2

Query: 1037 LAAAGGAGTVEQEQPAEQYMGMTVEEIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVLGQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVEREQAFQIAQTVDMQLASMVETLKSLVDQINSSXXXXXXXXXXXXXXXXGGDAAGDGNARKIVRILNAHHHSLAWLEETSKRMLMDASEVGRRLGMPADAALMPP 1717
            LAAAGGAGT EQEQP EQYM MTVEEIVNSWNV+L+QDATTFTNEAVKV+ WD  LRETQSELFSLADDVQKLVLGQQDL RSMKAI GEQSHLDKTLDQLEGQAEKLMHDQR Q PEEGDVEREQAFQIAQTVDMQLA MV+TLKSLVDQ+NSS                 GD  GD NARKIVRILNAHHHSL WLEETSK ML DA++VGRRLGMP+DAAL+PP
Sbjct:  143 LAAAGGAGTTEQEQPPEQYMNMTVEEIVNSWNVELDQDATTFTNEAVKVSDWDGVLRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSHLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTSSSSFGAVGGR-----GDTGGDSNARKIVRILNAHHHSLTWLEETSKTMLQDAADVGRRLGMPSDAALLPP 364

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BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Match: A0A6H5JT70_9PHAE (Nsp1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT70_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 6.180e-90
Identity = 166/206 (80.58%), Postives = 175/206 (84.95%), Query Frame = 2

Query: 1100 MTVEEIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVLGQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVEREQAFQIAQTVDMQLASMVETLKSLVDQINSSXXXXXXXXXXXXXXXXGGDAAGDGNARKIVRILNAHHHSLAWLEETSKRMLMDASEVGRRLGMPADAALMPP 1717
            MTVEEIVNSWNV+L+QDATTFTNEAVKV+ WDV LRETQSELFSLADDVQKLVLGQQDL RSMKAI GEQSHLDKTLDQLEGQAEKLM DQR Q PEEGDVEREQAFQIAQTVDMQLA MV+TLKSLVDQ+NSS                 GDA GD NARKIVRILNAHHHSL WLEETSK ML D ++VGRRLGMP+DAAL+PP
Sbjct:  320 MTVEEIVNSWNVELDQDATTFTNEAVKVSDWDVVLRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSHLDKTLDQLEGQAEKLMRDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTSSSSIGAVGGR-----GDAGGDSNARKIVRILNAHHHSLTWLEETSKTMLQDTADVGRRLGMPSDAALLPP 520

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BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Match: A0A225WLQ3_9STRA (Nuclear pore glycoprotein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLQ3_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.660e-31
Identity = 78/211 (36.97%), Postives = 128/211 (60.66%), Query Frame = 2

Query: 1055 AGTVEQEQPAEQYMGMTVEEIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVLGQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVEREQAFQIAQTVDMQLASMVETLKSLVDQINSSXXXXXXXXXXXXXXXXGGDAAGDGNAR-KIVRILNAHHHSLAWLEETSKRMLMDASEVGRRL 1684
            A   E ++P  +YMG T+E+I+N+W+ QLE++A TFT EAVKV+ WD  L ++Q +L  +A DV+++ + Q +L+ ++  I   Q  L  TL+QLE   +K M++ ++Q+P   D+EREQ  Q++  +D QL SM  TLK  V+++N +                  D A D N   +I+++LN HH+SL W+E ++ R+  D  ++ R+L
Sbjct:  252 APVTETDKPPAEYMGRTIEDIINTWSEQLERNADTFTTEAVKVSKWDSDLMDSQRKLGDIAGDVRRIQVAQNELDSNLDTIFAYQMELKSTLEQLEKSVDK-MYESQDQMPVAADIEREQTLQLSVDIDDQLNSMTTTLKETVEKLNKAQD----------------DVADDNNPMVQIMKVLNVHHNSLQWIEGSASRINSDIGQLSRKL 445

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BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Match: A0A8K1CMM0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMM0_PYTOL)

HSP 1 Score: 140 bits (354), Expect = 2.410e-31
Identity = 79/205 (38.54%), Postives = 126/205 (61.46%), Query Frame = 2

Query: 1073 EQPAEQYMGMTVEEIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVLGQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVEREQAFQIAQTVDMQLASMVETLKSLVDQINSSXXXXXXXXXXXXXXXXGGDAAGDGN-ARKIVRILNAHHHSLAWLEETSKRMLMDASEVGRRL 1684
            EQP   YMG T+EEI+N W+ QLE++A TFTNEAVKV+ WD  L ++Q +L  LA DV+++ + Q++L+ ++  I   Q  L  TL+QLE   +K M++ ++Q+P   D+EREQ  Q +  +D QL +M+ TLK  V+++N +                  D   D N A +I+++LN HH+SL W+E  + R+  + +++ R+L
Sbjct:  321 EQPPADYMGKTIEEIINMWSEQLERNADTFTNEAVKVSQWDGELMDSQKKLGELASDVRRIQVAQKELDTNLDTIFAYQMELKSTLEQLENSVDK-MYESQDQMPVAADIEREQMLQTSVDIDDQLNAMMTTLKETVEKLNKAQN----------------DVTDDSNPAVQIMKVLNVHHNSLQWIEGNAGRINREIAQISRKL 508

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BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Match: A0A7S3XTG9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTG9_HETAK)

HSP 1 Score: 132 bits (332), Expect = 2.960e-31
Identity = 78/203 (38.42%), Postives = 115/203 (56.65%), Query Frame = 2

Query: 1079 PAEQYMGMTVEEIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVLGQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVEREQAFQIAQTVDMQLASMVETLKSLVDQINSSXXXXXXXXXXXXXXXXGGDAAGDGN-ARKIVRILNAHHHSLAWLEETSKRMLMDASEVGRRL 1684
            PAE Y   TV+EI+  W V+LEQD   F  +A +VA WD ALRE Q  L S +D V +L+LGQ +L+R++  +   Q  L+ TL  LE Q ++       + P++ D+ERE+A+Q+A   D +L  +++ L++L D IN+                       D N   KI+RILNAHH SLAWLE  +  +  + ++VGRR+
Sbjct:    6 PAE-YQAKTVDEILGDWGVRLEQDVAAFARQAARVAAWDQALREHQEALGSASDRVHRLLLGQAELDRTLDTVQAYQGELEATLGALEAQVDEQFRRCAARAPDDADLERERAYQLAVATDQRLGGVLDGLRALADDINAGFDRQVD----------------DANPVSKILRILNAHHQSLAWLERQASGLDRELAQVGRRM 191

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BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Match: A0A2P4XQD6_9STRA (Nuclear pore glycoprotein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQD6_9STRA)

HSP 1 Score: 139 bits (349), Expect = 7.130e-31
Identity = 78/211 (36.97%), Postives = 128/211 (60.66%), Query Frame = 2

Query: 1055 AGTVEQEQPAEQYMGMTVEEIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVLGQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVEREQAFQIAQTVDMQLASMVETLKSLVDQINSSXXXXXXXXXXXXXXXXGGDAAGDGNAR-KIVRILNAHHHSLAWLEETSKRMLMDASEVGRRL 1684
            A   E ++P  +YMG T+E+I+N+W+ QLE++A TFT EAVKV+ WD  L ++Q +L  +A DV+++ + Q +L+ ++  I   Q  L  TL+QLE   +K M++ ++Q+P   D+EREQ  Q++  +D QL SM  TLK  V+++N +                  D A D N   +I+++LN HH+SL W+E ++ R+  D  ++ R+L
Sbjct:  288 APVTETDKPPAEYMGKTIEDIINAWSEQLERNADTFTTEAVKVSKWDSDLMDSQRKLGDIAGDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLEKSVDK-MYESQDQMPVAADIEREQTLQLSVDIDDQLNSMTTTLKETVEKLNKAQD----------------DVADDNNPLVQIMKVLNVHHNSLQWIEGSASRINSDIVQLSRKL 481

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BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Match: A0A484E958_BRELC (Nsp1_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E958_BRELC)

HSP 1 Score: 136 bits (343), Expect = 1.840e-30
Identity = 77/205 (37.56%), Postives = 124/205 (60.49%), Query Frame = 2

Query: 1073 EQPAEQYMGMTVEEIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVLGQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVEREQAFQIAQTVDMQLASMVETLKSLVDQINSSXXXXXXXXXXXXXXXXGGDAAGDGNAR-KIVRILNAHHHSLAWLEETSKRMLMDASEVGRRL 1684
            + P  +YMG TVE+I+NSW+ QLE++A TFT EAVKV+ WD  + ++Q +L  LA DV+++ + Q +L+ ++  I   Q  L  TL+QLE   +K M++ ++Q+P   D+EREQ  Q++  +D QL SM  TLK  V+ +N +                  D A + N   +I+++LN HHHSL W+E ++ R+  +  ++ R+L
Sbjct:  242 DMPPAEYMGRTVEDIINSWSEQLERNADTFTTEAVKVSQWDSDVLDSQRKLGDLAGDVRRIQVAQNELDSNLDTIFAYQMELKSTLEQLEKSVDK-MYESQDQMPVAADIEREQTLQLSVDLDDQLNSMTTTLKETVETLNQAHN----------------DVADESNPMVQIMKVLNVHHHSLQWIEGSADRITSEIGQLSRKL 429

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BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Match: H3GWZ9_PHYRM (Nsp1_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWZ9_PHYRM)

HSP 1 Score: 137 bits (344), Expect = 2.070e-30
Identity = 77/211 (36.49%), Postives = 129/211 (61.14%), Query Frame = 2

Query: 1055 AGTVEQEQPAEQYMGMTVEEIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVLGQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVEREQAFQIAQTVDMQLASMVETLKSLVDQINSSXXXXXXXXXXXXXXXXGGDAAGDGNAR-KIVRILNAHHHSLAWLEETSKRMLMDASEVGRRL 1684
            A   E ++P  +YMG T+E+I+N+W+ QLE++A TFT EAVKV+ WD  L ++Q +L  +A DV+++ + Q +L+ ++  I   Q  L  TL+QLE   +K M++ ++Q+P   D+EREQ  Q++  +D QL SM  TLK  V+++N +                  D A + N   +I+++LN HH+SL W+E ++ R+  + S++ R+L
Sbjct:  261 APATETDKPPAEYMGKTIEDIINAWSEQLERNADTFTTEAVKVSKWDSDLMDSQRKLGGIAGDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLEKSVDK-MYESQDQMPVAADIEREQTLQLSVDIDDQLNSMTTTLKETVEKLNKAQD----------------DVADENNPMVQIMKVLNVHHNSLQWIEGSAGRINGEISQLSRKL 454

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BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Match: A0A1V9Z874_9STRA (Nuclear pore glycoprotein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z874_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.830e-30
Identity = 77/210 (36.67%), Postives = 120/210 (57.14%), Query Frame = 2

Query: 1055 AGTVEQEQPAEQYMGMTVEEIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVLGQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVEREQAFQIAQTVDMQLASMVETLKSLVDQINSSXXXXXXXXXXXXXXXXGGDAAGDGNARKIVRILNAHHHSLAWLEETSKRMLMDASEVGRRL 1684
            A T  QEQP  +Y+G TVE+I+N W+ QLE  A  FTNEAV+V+ WD  L E Q +L  LA DV++L + Q++L  ++  I+  Q  LD TL+ LE   +KL    R Q+P+  D+EREQ  Q++  +D QL  M   LK  +D++N+S                      D    +I+++LN HH+SL W++  + ++  D +++ ++L
Sbjct: 1278 APTTAQEQPPAEYLGKTVEDIINMWSEQLENHAMAFTNEAVRVSHWDTELMENQKKLGDLAIDVRRLQMAQKELNANLDTISAYQMELDSTLENLESSVDKLFESHR-QIPDTADIEREQGLQLSVDIDNQLNMMSTALKETIDRLNASQSQQDDS---------------DNPMAQILKVLNVHHNSLVWIDGNATKLASDMADIAKKL 1471

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BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Match: G4Z9S7_PHYSP (Nsp1_C domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9S7_PHYSP)

HSP 1 Score: 137 bits (346), Expect = 2.880e-30
Identity = 76/211 (36.02%), Postives = 129/211 (61.14%), Query Frame = 2

Query: 1055 AGTVEQEQPAEQYMGMTVEEIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVLGQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVEREQAFQIAQTVDMQLASMVETLKSLVDQINSSXXXXXXXXXXXXXXXXGGDAAGDGNAR-KIVRILNAHHHSLAWLEETSKRMLMDASEVGRRL 1684
            A   E ++P  +YMG T+E+I+N+W+ QLE++A TFT EAVKV+ WD  L ++Q +L  +A DV+++ + Q +L+ ++  I   Q  L  TL+QLE   +K M++ ++Q+P   D+EREQ  Q++  +D QL SM  TLK  V+++N +                  D A D N   +I+++LN HH+SL W+E ++ ++  + +++ R+L
Sbjct:  325 AAPTETDKPPAEYMGRTIEDIINAWSEQLERNADTFTTEAVKVSKWDSDLMDSQRQLGDIAGDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLEKSVDK-MYESQDQMPVAADIEREQTLQLSVDIDDQLNSMTTTLKETVEKLNKAQV----------------DVADDNNPMVQIMKVLNVHHNSLQWIEGSAGKINSEIAQLSRKL 518

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig15.252.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRT4_ECTSI	2.450e-104	81.06	Nsp1_C domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JT70_9PHAE	6.180e-90	80.58	Nsp1_C domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A225WLQ3_9STRA	1.660e-31	36.97	Nuclear pore glycoprotein n=1 Tax=Phytophthora meg...	[more]
A0A8K1CMM0_PYTOL	2.410e-31	38.54	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S3XTG9_HETAK	2.960e-31	38.42	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A2P4XQD6_9STRA	7.130e-31	36.97	Nuclear pore glycoprotein n=2 Tax=Phytophthora pal...	[more]
A0A484E958_BRELC	1.840e-30	37.56	Nsp1_C domain-containing protein n=1 Tax=Bremia la...	[more]
H3GWZ9_PHYRM	2.070e-30	36.49	Nsp1_C domain-containing protein n=1 Tax=Phytophth...	[more]
A0A1V9Z874_9STRA	2.830e-30	36.67	Nuclear pore glycoprotein n=1 Tax=Thraustotheca cl...	[more]
G4Z9S7_PHYSP	2.880e-30	36.02	Nsp1_C domain-containing protein n=1 Tax=Phytophth...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig15	contig	P-littoralis_Contig15:959295..968045 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FRT4
Preferred name	NUP62
PFAMs	Nsp1_C,Nucleoporin_FG
Model size	3703
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K09585,ko:K14306
KEGG TC	1.I.1
KEGG Pathway	ko03013,map03013
KEGG Module	M00427
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000054,GO:0000055,GO:0000056,GO:0000070,GO:0000132,GO:0000226,GO:0000278,GO:0000280,GO:0000785,GO:0000819,GO:0000922,GO:0001932,GO:0001933,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005102,GO:0005198,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005642,GO:0005643,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0006139,GO:0006351,GO:0006355,GO:0006403,GO:0006405,GO:0006406,GO:0006409,GO:0006469,GO:0006606,GO:0006607,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006996,GO:0006997,GO:0007010,GO:0007017,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007098,GO:0007100,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007346,GO:0007568,GO:0007569,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008285,GO:0008289,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009755,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010389,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010824,GO:0010825,GO:0010941,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0015931,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016070,GO:0016477,GO:0016973,GO:0017038,GO:0017056,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019894,GO:0019904,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030010,GO:0030154,GO:0030159,GO:0030496,GO:0030544,GO:0030717,GO:0031023,GO:0031072,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031400,GO:0031490,GO:0031503,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032182,GO:0032268,GO:0032269,GO:0032386,GO:0032465,GO:0032467,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032774,GO:0032870,GO:0032879,GO:0032880,GO:0032886,GO:0032947,GO:0032954,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0033673,GO:0033750,GO:0034399,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0035257,GO:0040001,GO:0040011,GO:0042058,GO:0042059,GO:0042127,GO:0042169,GO:0042175,GO:0042221,GO:0042254,GO:0042306,GO:0042325,GO:0042326,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043122,GO:0043123,GO:0043130,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043549,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044464,GO:0044613,GO:0044615,GO:0044703,GO:0045184,GO:0045742,GO:0045787,GO:0045840,GO:0045859,GO:0045893,GO:0045931,GO:0045935,GO:0045936,GO:0046483,GO:0046578,GO:0046580,GO:0046599,GO:0046601,GO:0046605,GO:0046607,GO:0046822,GO:0046907,GO:0046966,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048856,GO:0048869,GO:0048870,GO:0050000,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051028,GO:0051031,GO:0051049,GO:0051056,GO:0051058,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051259,GO:0051276,GO:0051291,GO:0051293,GO:0051294,GO:0051299,GO:0051302,GO:0051303,GO:0051310,GO:0051321,GO:0051338,GO:0051348,GO:0051425,GO:0051427,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051674,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051879,GO:0060236,GO:0060255,GO:0060341,GO:0060548,GO:0061982,GO:0061988,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070192,GO:0070201,GO:0070206,GO:0070208,GO:0070507,GO:0070727,GO:0070887,GO:0070925,GO:0071166,GO:0071310,GO:0071426,GO:0071427,GO:0071428,GO:0071431,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071901,GO:0072594,GO:0072686,GO:0080090,GO:0090066,GO:0090068,GO:0090087,GO:0090224,GO:0090304,GO:0090543,GO:0097064,GO:0097159,GO:0097240,GO:0097298,GO:0097659,GO:0098534,GO:0098589,GO:0098805,GO:0098813,GO:0140014,GO:1900180,GO:1901184,GO:1901185,GO:1901186,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901987,GO:1901990,GO:1902115,GO:1902117,GO:1902412,GO:1902531,GO:1902532,GO:1902533,GO:1902680,GO:1902749,GO:1902850,GO:1903046,GO:1903047,GO:1903436,GO:1903438,GO:1903490,GO:1903506,GO:1903508,GO:1903827,GO:1903829,GO:1904589,GO:1904779,GO:1904781,GO:1990904,GO:2000112,GO:2001141
Exons	8
Evalue	8.08e-112
EggNOG OGs	KOG2196@1\|root,KOG2196@2759\|Eukaryota
EC	5.3.4.1
Description	structural constituent of nuclear pore
Cds size	1509
COG category	S
BRITE	ko00000,ko00001,ko00002,ko01000,ko03019,ko03110,ko04131

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig15.252.2	prot_P-littoralis_Contig15.252.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig15 960465..966062 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789715.842428-UTR-P-littoralis_Contig15:959294..959355	1680789715.842428-UTR-P-littoralis_Contig15:959294..959355	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig15 959295..959355 +
1680789715.8536868-UTR-P-littoralis_Contig15:960314..960464	1680789715.8536868-UTR-P-littoralis_Contig15:960314..960464	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig15 960315..960464 +
1680789715.9381003-UTR-P-littoralis_Contig15:966062..968045	1680789715.9381003-UTR-P-littoralis_Contig15:966062..968045	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig15 966063..968045 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789715.8628113-CDS-P-littoralis_Contig15:960464..960948	1680789715.8628113-CDS-P-littoralis_Contig15:960464..960948	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig15 960465..960948 +
1680789715.8731682-CDS-P-littoralis_Contig15:961091..961491	1680789715.8731682-CDS-P-littoralis_Contig15:961091..961491	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig15 961092..961491 +
1680789715.8842099-CDS-P-littoralis_Contig15:961841..961926	1680789715.8842099-CDS-P-littoralis_Contig15:961841..961926	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig15 961842..961926 +
1680789715.8960648-CDS-P-littoralis_Contig15:962630..962720	1680789715.8960648-CDS-P-littoralis_Contig15:962630..962720	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig15 962631..962720 +
1680789715.9045637-CDS-P-littoralis_Contig15:964281..964359	1680789715.9045637-CDS-P-littoralis_Contig15:964281..964359	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig15 964282..964359 +
1680789715.919243-CDS-P-littoralis_Contig15:964980..965064	1680789715.919243-CDS-P-littoralis_Contig15:964980..965064	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig15 964981..965064 +
1680789715.9296932-CDS-P-littoralis_Contig15:965774..966062	1680789715.9296932-CDS-P-littoralis_Contig15:965774..966062	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig15 965775..966062 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig15:959295..968045+
coding sequence from alignment at P-littoralis_Contig15:959295..968045+

protein sequence of mRNA_P-littoralis_Contig15.252.2

>prot_P-littoralis_Contig15.252.2 ID=prot_P-littoralis_Contig15.252.2|Name=mRNA_P-littoralis_Contig15.252.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=503bp
MAFSFSAGGAAAKPAAGGFSFGTSAPAPAATAAAPAPAATTAFSFSATPA
AAAPAAAAGGFSFGAAASTPAAAAAAVPAATAAAAPAGGFSFGATAAKPA
AAPAPAATAATPAAAPAGGFSFGATPAPAPATTTSTAAAPAAAAPVFGAT
TAPAPAPTAASGGFSFGAATAAPAASAPAAATAAAVDTSATPAPAAAAPA
AAAPAAGGFSFGNAATTATAAPAAAPAAAAAGGSLFGGGEAAAPAGGALG
VSGTSKPGDATAAASGTAGVAGPSALAAAGGAGTVEQEQPAEQYMGMTVE
EIVNSWNVQLEQDATTFTNEAVKVAGWDVALRETQSELFSLADDVQKLVL
GQQDLERSMKAIAGEQSHLDKTLDQLEGQAEKLMHDQRNQLPEEGDVERE
QAFQIAQTVDMQLASMVETLKSLVDQINSSSSSSSSFGGGGGGGSRGGDA
AGDGNARKIVRILNAHHHSLAWLEETSKRMLMDASEVGRRLGMPADAALM
PP*

mRNA from alignment at P-littoralis_Contig15:959295..968045+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig15.252.2 ID=mRNA_P-littoralis_Contig15.252.2|Name=mRNA_P-littoralis_Contig15.252.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8751bp|location=Sequence derived from alignment at P-littoralis_Contig15:959295..968045+ (Pylaiella littoralis U1_48)
CGACAACAAGGCAGGGTATCACTGATTGCTTGAAAGGAGGCTTCAAATTC
TGGGAGTGGAGGTGAGACAATAGGCCAGTGGTGGCGTACGCCATGAACCA
GAGCGCAATTTCGGGTTTCGTGGGTATGATAAGTCCGTTGTTACGACAGC
GTCCATCACGTCTCTTGTCCAGAATACCGGTACAACAACAGCAGACATTT
GAGAGGATCGGGTAAGAGAGGGCGGACACCTTCGAGGACACAACACGGCC
AAACGCAACCACAGATCGACCAATTGATCTATTCGCAGAACGAATCCAAG
GGAGAGCTTTCGCGCAGTAGCTAGAGAGCACGCCGATAGCCTCATTGCTC
GATGCTGGATTATGCAAACACCTTTTCAAAGCTCCTGCTACGTGATAACT
CCCCACCCCATACCACGGGTGCTGTCTCCAACAGCCCTCATCAGACTTGT
ACAACGGTAACGTCAATGAAAAGAGCATTCTTGTAAACGGCAGACAGAGA
CTGCCGTTACACCTGTGTGGTAACACGTGAGCATCTAGCAAATTGTCACA
CCCTATGTGGAATTCTTTAACATTTTGGATGGGTGCTCTCTTAAGTCGGT
GTACTATCTGATGCTTGATCTGATGTTCGTCGCTCACGTGGAGTTCGTAC
GCCGGTAGCCCACATGATCCTGTTTCGCAATAATAGAGCGGCACAGCACT
GCTGCAGTTGTTGTGCTGTTTCGTCGACAGCAGGCAGCTTGCAGTCCTGC
AAAGCAGCGCCAAATACTGCTGTTGGCGCAAGGCCCCTACATCTATCTTA
TGGAAACACCAACAGCCACATATCATAGGAAGGCTCGAAAAGCGCCTTCG
TTTTCTCATCACAGGACCTGTTCACACACACGCACACACACACACCCATC
TTGCTCAGTTTGGCCAATTTTGTTTGATCTGCAGCTCTTTTTAAAACGCG
CACACACAAGCGCAGGTAACGAGAACAAAAACGCTCTTCCCTTGCCGTCA
ACCGACCCATCAATCCGCAGTGTTTGATTTTTTCCGAGTGAGAAAGAGAT
CGATTGAACAAGGAGTGCGCGTGGGTCCAACCCAACGGCGACACCTACGG
CGGGGCAACACTATTGCATAGCTTTATATCACAGTTCGGCCTGAATTCCG
ATCGGCAGCGTCTATAAAGGATGGCGTTCAGCTTCTCCGCTGGCGGTGCA
GCAGCCAAGCCGGCAGCAGGAGGATTCAGCTTCGGAACATCGGCTCCGGC
ACCAGCGGCCACCGCCGCGGCACCTGCACCAGCAGCAACCACAGCCTTCT
CTTTTTCGGCAACACCCGCCGCTGCCGCTCCTGCTGCCGCCGCCGGAGGG
TTTTCGTTTGGGGCCGCTGCTTCGACGCCTGCGGCAGCAGCAGCAGCGGT
ACCAGCCGCAACTGCTGCCGCAGCACCTGCTGGAGGGTTTTCGTTCGGGG
CAACCGCTGCTAAGCCTGCTGCAGCACCAGCACCAGCCGCAACTGCCGCA
ACACCCGCTGCTGCTCCTGCGGGCGGCTTTTCCTTCGGGGCGACGCCGGC
GCCCGCCCCCGCGACCACAACAAGTACCGCTGCCGCACCGGCAGCCGCCG
CTCCCGTATTTGGTGCCACGACAGCCCCTGCTCCTGCCCCTACCGCTGCT
TCAGGTACGAACGCGGTGTCTACCCTTTTTGGTTCAGATACACAAAGAGT
TTCCCAAAGTACATCGTAACGTCCGGTTCCATAGGAGTACGCTCTGAGTC
AACCCCACTGCCTTGTTGCCTGTATTTGGACGCTCTCTTTGTATCAGGGG
GATTTTCGTTTGGCGCCGCCACCGCCGCTCCCGCAGCATCAGCGCCAGCA
GCGGCGACCGCCGCCGCCGTCGATACCTCCGCGACCCCAGCACCCGCTGC
TGCTGCTCCTGCTGCTGCTGCACCTGCAGCTGGTGGGTTTTCTTTCGGAA
ATGCGGCGACAACAGCTACCGCTGCCCCCGCCGCCGCCCCCGCCGCCGCC
GCTGCCGGTGGGAGCTTGTTTGGCGGGGGGGAAGCTGCTGCTCCGGCAGG
GGGAGCGTTGGGGGTTTCTGGGACGTCCAAACCGGGGGACGCTACTGCTG
CGGCAAGCGGTACGGCGGGGGTAGCAGGTCCGTCGGCGCTCGCTGCGGCG
GGCGGGGCGGGGACGGTGGAGCAGGAGCAACCTGCCGAGCAGTACATGTG
AGCTGCGTTGTGATTGTTGGTTGATATTGATGTACAGCAGTATTTCAAAG
TACGTTCAGCGTTGTCGCTGTTGTTGACCTTCTCGTTATCGCCATATTGG
CGACCTGGGTTAGGGTAAAAATGCTGCTCTCCGCGAAGCTTTTTTGGGCT
TGTGCACTGCGAGCGTTCGCCCGCAGTCCCCAACGTTTGAGGGGTCAATG
GGGTTTGCTCTTTTGTGTCGGTGTCTGATACACGCAGCCTTTCTCGTGAA
CGACGGGCGATCTCGCGCTGTTGACGTGTCGCGTTCGTTTTGCTCTCCGG
GGGCGGGGGGGGGGGTAAATGAAACTGTCAACACAACATGAAATCAGGGG
CATGACGGTGGAGGAAATCGTCAACAGCTGGAATGTGCAGCTGGAGCAGG
ACGCGACAACATTCACGAACGAAGCTGTCAAGGTGCGGCCGAGCACTAAA
CAGAGCAGGCGGGCGGGCGGAGGGGCGGGTGGAAGAGTATCATGTTGTTA
TGAACGTCGTCCATAAATCTTGTTATACCGTATGATACGCCATTATAAGA
GTAACGCCGGAGAATATAGCAGAGCATTCATTGCTCTTTTTGGGACGCCG
TCCATAAATCTATGTACACGAAGGATGATAAAAGGTGAAGTTCAGACAGC
AAAAGCAGCTAAACATCTTTCGTTGCTTTCTGGGACACTCTGCAGAACGG
AAGCTACGGTGTGCACGTAATTCCCATCTGATTCCTACGAGAGATTGGCA
GCCGTATCCGAAGGATTGGCTGCTGCCGCATCCGATTGCTTCCTGCTGCA
CTCTAAATTGCCTGATCGTCCGTGCCCGTGAGGTAGAGGTTCAGGTTCCC
GGCGGACTAAAGTGAATATTGCATTACGATGAAAACGTGTTGATGATGAT
GATATCATAGTACCACCCGTTGGAGTGCTAGCACGGTTTAAAGAGCAATA
AAAACGGGGCAGCAAGGATGAGGTTTCGAAACGGCGTCTCCGGGTGGATG
TAAAGCTCCATCTCTCCGACCATGTGGCATGGTGGGATGCCGACTCCAAT
CTCTTCACCCTTGACCTTGGTGGTACCCCCTTGAAACCAATCTGCACCCT
CTACATTGATGGCACACCGTTCGTCTGCCGTCTCAGGTGGCGGGGTGGGA
CGTGGCCTTGCGAGAGACCCAGTCGGAGCTGTTCAGCCTCGCCGATGATG
TGCAGAAGCTCGTGCTGGGGCAACAGGTCAGGAAATGAAACAAACCACAA
AAGGTCACACGGGAATGATGTACTGCTCTTATCGCGTTCGGGAAAGCAGG
GAGATCCGTAAGGGTGGGGGAGGAGGGGGGATAACAGCGCGAAAGGCGTC
GGCGTGGATTGTAATCCCAAGACGTATGATATGACGTGTCTATATATGAT
ATAGCCCAGAAGGGGTTGAAAGGGGTTGGAGCTTTGAACGTCACGTGTGA
ACGTCACGTGTTGGACTGCCGAACATACCAAAACAGCGCTCTTCCTCGGA
CAGCAGGTGGGGCAGTTTCGAAACCGACCAATCATACACGCAGGTCTCAG
TGCGTCCCTATATTTGTGTGTGTGTGCGTGTGCGTGTGTGTGTGCGTGTG
TGCGTGTGTGCGCGCGTGCGCGTGTACCTATGCGGTAGCAGTTTCATGGC
ATCTCCATGCCGTGTGTACCGCGGTTGTCGTTTTGCGTAACGTTTCGGTC
GCGCATGTCTTGTTTTTGTTTCGTTTCGTTTCGTTTCGTTTTCGGGTTGC
TCTTCGCGATAAGCTTGGGTCCTTTCAGTCCGAGCAGAGGCTTGCGCGTT
AAGGTATCGAAGTGAGAAATATATGAGAGAGAGAGAGAGAGACAGAGGAA
AGAGTAAGGAACGAGGAAAGAGTAAGGAACGCTCAGAACTCAAGGGGGCG
GTTGGGCAGGTGTACAAGGTTTTCTTTTATCCTGCGTGGTGTCGACGTTG
TTTTTATGTATCCTGCTTGGTGTCGGCGATACCCTGCATGTGATAGTTCG
ATCGAGCTCCCTCCGTACGTACGTGTAAGGCTGACCCATATCAAGAGCTG
TTTTCGTCGCCTCTCTTCCAGCTCGCCGTCTCTGTTTGTTGCCGTCCTTT
GGCGGAGGAATCGTTGCCGCGGAGGAAACATTCTTTCGAGGGAACTCTGT
CCGTCTGTCTGTCCGTCTGTCTGCCATTTGCTTGTGAATCGTTACGATGG
ACTCAAAATATATGACCTGTCAAAATTAGCCAGGACAGGTTGAAGGGTTG
CATCTCGCGTGTTACTATGGCTCCAATCACATATATGTTCCATCAACTCC
TCCATGCGATCGACGCGTACTTCATTTCGGGTATCTTATCGTATGAGATA
TGCTTCGGCTCTTGTGTGGAATACCAAAGCAACGGTCACAGAGAGGACGG
AAGCTTCTCGTGGATGGTCCCATCACATTCATATCCATCGATTGACGGGT
TCATTCATCGACGTGCGCATGATTTTGGACATGTTGTCGCCTGAGACAGA
TGGAATCCTCACGTGTGAAACAGCACAAGACACAAAAGAGTTCGCATCTT
GACCGGCCGTGCCAGCACAGCCGCATGCTTTATTTTATGATTTTGCACGA
CTTCCCCTTCAACGTTAAAATACAAAAGGTCCTCTCCGCCCAACGGGCCA
GCCGCGTGCTGGCATATTTCTCTCGCAAAGTTTATTTTCGATTCTCCTGC
GCGAAGCAAAACTACCAGAAATATCCTCATCATCGCTGACCCGGCCGCTT
GCTTCTGTTTTGTTTTTCACGACTTTCTTGTGCGCAGGACCTGGAGCGAA
GTATGAAGGCCATCGCGGGAGAACAGTCTCACTTGGACAAAACCCTAGAC
CAGCTGGAAGGGCAGGTGGGGTGGATGGGCGCGTTACGGCCAAGGGGACA
TAATGGTCTTGTCCCCGTGTTTTGTTATTTTCGTCAGGGTGTTTTTCCTA
TCGGTGATTTCGTCCCGATTGTTGTTGTTGTCGTGATGAGAGCGTGGCGT
TTCCGCCCTTGGTTTGCAGAGATGTGTGGGCGTGTTAACGTCGCAACAAG
TATTACCGCTGAGTCAAAATGTTAATGTTTGTTTGTTGAGGTGGTAGGCC
GGGCGGGTTTGGATTTCGGCTTGCATGATGTTCGTTTATTCGGAAAGAGA
AGTAAGTTATCATTGTGCGGCCGTTGCGGAGCACGGTCATGGAAACAAAA
TTTTAATGATCTTTCGAACGACAGGAATTTTGTTTTTTACTCACTCCAAA
AGTGATCGAAGAGGATGAGGACCTACGTTGAAACACTGATAACGACAGCC
AAAATATGTACTGCTGTAAAGGTGGGTGAATCGACGCTCAGAGAGATTCT
CCAGCCGACCAACATCAATAAACGGCAGCCAGAAGATGTCACAGCGCGGT
AGGATCAACGCTGAGAGAGGATCATAACCCACACCAACACCAACAACGCC
AAGCGTGCGACCTACAATCAATTTATTCTTGACCAGGCGGAGAAGTTAAT
GCACGACCAACGCAACCAGTTGCCGGAGGAGGGGGATGTGGAACGGGAAC
AGGCGTTCCAAATCGCACAGGTCTGTAAGATGTTTCTATCCCACCTCCAC
TGCTTTCAGTCGCCTTTCCTCTCGGGCACGCACTCCTATCGTCTTCGTGT
CTTTTTCATCGCCTCTTTTTTCCTTTTGTTGCACTGCTTCTGTACTCTCA
CCGCCCTTTTTTTTTCATGTTTTATTGCATGTTGCCTGCTTCTGGCCTCC
CTGTCAGCTCTGCCCATCGGGGAGGCATGTGCTTCGTTTTGTTGAGTTGG
CTTGATTGTTTACCGCGTAATGTGCGGCAAACAGTAACAGTCGCACCCGT
TGAATAAGCCAAAAAAAATCAGAGCGAGAGCAAGCTCTTCTGATTGCCGC
ATGATCATTTTTGTTTCCCCTCTCCTCTGCTTTGTGGTTGACTTGCAATT
CTTTCCACCGACGACGATACCCATCGATGTTTCTCTCGTTTTTCGCCAGC
GCTGTTTCATCAGCTGTTGCATGGACCCTGCCGGCCGGTAACCATCAATC
AAATCTGTCGGAATCGCTTTCTGAAAAAAAGCTGTCCCGCAATCATATAC
ATTCCTACCTTTGCCTCTCTTGTTTTCACCACCGGTATGTATCCGTACCC
CCTCTCTTACGCCCTCTCCCATTTCTTTGTTTTCATCCGCCGTCGATACG
TTTCCCCCCCCCCCCCCCCCCCCCGCAACCTCTCTCTCGCCCATGCCCGC
CCCTAACCCCTAACCCCCAACGGAACGCAGACGGTAGACATGCAACTCGC
GAGCATGGTGGAGACCCTCAAGTCTCTGGTCGACCAGATCAACTCCTCCT
CGTCCTCTTCGTCAAGCTTTGGTGGTGGCGGTGGTGGCGGCAGCAGAGGA
GGGGATGCCGCCGGCGACGGCAACGCCCGCAAGATTGTCCGCATCCTCAA
CGCGCACCACCACTCTCTGGCGTGGCTGGAGGAGACCTCGAAGAGGATGC
TCATGGATGCGTCCGAGGTTGGCCGGAGGCTGGGGATGCCGGCGGATGCC
GCCCTCATGCCTCCGTAATATGATACGATAGTTTAGGTTCAGCGTTGTTT
TTTGTTTTGTTTGAGGAGTGTAGTTGTCGATTTTGTGGTTGTGGGCTCGT
CGCTTTGGGTGTTTAGTCTCGCCATTGGTTTCTATTGTTTGTTGTGATTA
TAGGTTGGGGGGGGAGGGGTTGGGGGGAGAGGCTGTGCCGTGGACTGGCT
TTTGGCGAGATGATGCTGAACGGAGGGCACGAGAAGAAAGTGGCCAGCGG
CCGGATGCTTTGTTCGCTCCGCCGTATCGTATCATGGCATGTCGTTTGGA
GCGAGGGGAGGGGAAGTGAAGGCAAGGCGTCGTAAAGGGGGCATGGCCGC
TGCTGTCCGGCTTGAGGAGCTTTGAGGAGAGGCCGCCACGCGAAGAGGAT
GCTCCAGGTGCCGCGAGTGCCGTACGCTGCCGTTTTTGTTGCTGTTGTTC
TACACGCGGGAGTGACTAGGACGCGCTTTCCGAGAGGCGCAACTTAACTA
CGGAAGGACCCTGAGAGGGTATGTACCGTCCAGTAGAGCAAGGCTCTGAA
GGTGGGAGGTTATCAAACGAAACGTTCCGAATTGTATGCGTGCTGCCCCG
CTCGTTGGCGCATACTTCCATGTTTTTGTTTCCGAGGGTGCTGGTCTGCT
GGGAGATGGGATGCCGCCGTCGAACTGCGGCTCACTGTTTGCTGGGATGT
AAAACGGGATATTTCGGTCCTCATTGCTCTGTGAGAGGGAGGGAGCTCCT
GCTGTTTTCGTTGGCGTTGGCCAAAGTTTTGATCGGTTTTGCTCGCCATT
CTTTCGCGTTTCCGCTTTTGGCTGAGGCGACGGTGGCATCCGAGCAGGAC
GGCGGCAGTCGTTTTTATGTGTTGGCGCCGAGAAGCCTTATCTCAAGCTG
CCAGGGGTTTGGTTGGAGTTTTTGGGACGGGCATGACGCCATGCATGCTG
TCAGCCATGCGCGACTGGGAGCACGAGGAAGAGCCGTACAATGAGACCAC
AGGCGGCGGGCTGACTACTGGCCTACAGCAGTAGCGGTTGAATCGTGGGT
CTACTGGATGGACTGGTTGTCTGAGTGGTTAGTTGATTGGTAGGCCGTTC
CTCGAACTGATGGACCCCGTGGTCAATTGCCATGAGTGCGGGACCTCACG
GGCATGTAGACCAGGGTGTTATGGCCGAGAGAAGGCACCGAAAAACGGAT
TGACTCGCGAGCACAGAGAAGCCCGATAGAGGTCGTTCGTCGCGCCTATC
GAGGTGAAGGTCTTGTTGCGCTCGGAGATTGGTTGTTTATTGAGTGTTTC
TCTTTTTCAGGAGTCGGGGGATGATGGTTGTTCGAGAGAGATGGCTAAAA
TAAGACGTATCACGAAAACATGTTTCAGCAGGTGTCGCCTTGTGTCAAGC
TGAGAAGACTTGCCCCTTGGTACACGTTATTTAGGCCTCTTTAGAGTTTT
AGGTGCCGGAGAAAGAGAATCGAATGCGTAAGAGCATACCGTCTCACACA
TGTTAAATAAACCTCGAAATCCTGGGACTTTTCCTCTTTTGTGATCCCAG
CTGATGCACCCACCACAACTTGATACACCGACAGGTGTAGACTGGCGCCC
AGTGCCCAGTAAATGGAATAACAACACACACATTACTTAAAAGTGGGGCG
GGAGGAGACTGAACACGATTTTGTAGTCAAATGAACGACGCTGGAAGTAG
TTTGATGTTGGTACTGCTGTGACTGCTGTAGTTGAGTGATGCACACCGCG
TAGGAAGGTGTATCTTCTTCGCTCTTTTTTTGGTATTCCCTTGTAGTTTC
TTTCTGTTTTTTTGGTCGTCCTAGGGCTCAGCACTTTTTGTGACCACGGG
CTAGATTTTGGCGATGAGCTAATGTGAGAATCAACAACAACACACATGCT
GCCACATCTCGATCGTGTACAGCCCGCGAATAACATCCCCCCCGCCTCTA
CCTTCATGCCCGCCTCGTCGCCATGCATGCACTAGTGGGCAGCACAGCCA
T

Coding sequence (CDS) from alignment at P-littoralis_Contig15:959295..968045+

>mRNA_P-littoralis_Contig15.252.2 ID=mRNA_P-littoralis_Contig15.252.2|Name=mRNA_P-littoralis_Contig15.252.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1509bp|location=Sequence derived from alignment at P-littoralis_Contig15:959295..968045+ (Pylaiella littoralis U1_48)
ATGGCGTTCAGCTTCTCCGCTGGCGGTGCAGCAGCCAAGCCGGCAGCAGG
AGGATTCAGCTTCGGAACATCGGCTCCGGCACCAGCGGCCACCGCCGCGG
CACCTGCACCAGCAGCAACCACAGCCTTCTCTTTTTCGGCAACACCCGCC
GCTGCCGCTCCTGCTGCCGCCGCCGGAGGGTTTTCGTTTGGGGCCGCTGC
TTCGACGCCTGCGGCAGCAGCAGCAGCGGTACCAGCCGCAACTGCTGCCG
CAGCACCTGCTGGAGGGTTTTCGTTCGGGGCAACCGCTGCTAAGCCTGCT
GCAGCACCAGCACCAGCCGCAACTGCCGCAACACCCGCTGCTGCTCCTGC
GGGCGGCTTTTCCTTCGGGGCGACGCCGGCGCCCGCCCCCGCGACCACAA
CAAGTACCGCTGCCGCACCGGCAGCCGCCGCTCCCGTATTTGGTGCCACG
ACAGCCCCTGCTCCTGCCCCTACCGCTGCTTCAGGGGGATTTTCGTTTGG
CGCCGCCACCGCCGCTCCCGCAGCATCAGCGCCAGCAGCGGCGACCGCCG
CCGCCGTCGATACCTCCGCGACCCCAGCACCCGCTGCTGCTGCTCCTGCT
GCTGCTGCACCTGCAGCTGGTGGGTTTTCTTTCGGAAATGCGGCGACAAC
AGCTACCGCTGCCCCCGCCGCCGCCCCCGCCGCCGCCGCTGCCGGTGGGA
GCTTGTTTGGCGGGGGGGAAGCTGCTGCTCCGGCAGGGGGAGCGTTGGGG
GTTTCTGGGACGTCCAAACCGGGGGACGCTACTGCTGCGGCAAGCGGTAC
GGCGGGGGTAGCAGGTCCGTCGGCGCTCGCTGCGGCGGGCGGGGCGGGGA
CGGTGGAGCAGGAGCAACCTGCCGAGCAGTACATGGGCATGACGGTGGAG
GAAATCGTCAACAGCTGGAATGTGCAGCTGGAGCAGGACGCGACAACATT
CACGAACGAAGCTGTCAAGGTGGCGGGGTGGGACGTGGCCTTGCGAGAGA
CCCAGTCGGAGCTGTTCAGCCTCGCCGATGATGTGCAGAAGCTCGTGCTG
GGGCAACAGGACCTGGAGCGAAGTATGAAGGCCATCGCGGGAGAACAGTC
TCACTTGGACAAAACCCTAGACCAGCTGGAAGGGCAGGCGGAGAAGTTAA
TGCACGACCAACGCAACCAGTTGCCGGAGGAGGGGGATGTGGAACGGGAA
CAGGCGTTCCAAATCGCACAGACGGTAGACATGCAACTCGCGAGCATGGT
GGAGACCCTCAAGTCTCTGGTCGACCAGATCAACTCCTCCTCGTCCTCTT
CGTCAAGCTTTGGTGGTGGCGGTGGTGGCGGCAGCAGAGGAGGGGATGCC
GCCGGCGACGGCAACGCCCGCAAGATTGTCCGCATCCTCAACGCGCACCA
CCACTCTCTGGCGTGGCTGGAGGAGACCTCGAAGAGGATGCTCATGGATG
CGTCCGAGGTTGGCCGGAGGCTGGGGATGCCGGCGGATGCCGCCCTCATG
CCTCCGTAA