mRNA_P-littoralis_Contig149.38.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig149.38.1
Unique NamemRNA_P-littoralis_Contig149.38.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: D7FW86_ECTSI (Sterol C-5 desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW86_ECTSI)

HSP 1 Score: 546 bits (1406), Expect = 4.640e-190
Identity = 256/288 (88.89%), Postives = 270/288 (93.75%), Query Frame = 3
Query:  141 AATTNTPQLVKEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKGMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGY-REPSTSASKKIT 1001
            A  T++P+LVKEFNAWIN FLFSE   +   DAMGAKAAHYFLTYVRNFLGGSILYYITA++WHWVIY+KMG TLFPKGMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGL+GY+LYT +YL  VEIGIYWMHRTLHTNKFLYKYVHALHHKYNS ETLSPWASIAFNPLDGVLQACPYVI LFFIPCHYYTHMAMFMFTAIWATNIHDAVPGN+EPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGY +EPST A+KK +
Sbjct:    3 AGATSSPELVKEFNAWINSFLFSEGTIKTARDAMGAKAAHYFLTYVRNFLGGSILYYITAAMWHWVIYVKMGRTLFPKGMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLIGYVLYTVVYLTFVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSPETLSPWASIAFNPLDGVLQACPYVICLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNSEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGYSQEPSTDAAKKAS 290          
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A835YRT7_9STRA (Sterol C-5 desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT7_9STRA)

HSP 1 Score: 349 bits (895), Expect = 1.780e-112
Identity = 164/277 (59.21%), Postives = 200/277 (72.20%), Query Frame = 3
Query:  171 KEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKG--MPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGYREPSTSASKK 995
            KEFN W+N ++  E+      +A+G  AAH+ + Y R+ + GSI+YY  + +WH  IY       FP G  +P    I DQI LAQ S  +YA LPVL E+ IEEGYTR Y+  S+VGG   Y+  T LYL  VEIGIYWMHR LHTNK LYKYVHALHHKYN A+TL+PW S+AFNPLDG+LQACPYVI LF +PCHY TH+ M  FTA+WATNIHDA+ G+TEPIMG+KYHT+HHTHYHVNFGQFF FCD +WGTL+ P+      +PS++  KK
Sbjct:   45 KEFNQWVNSYIIPEAWTAAADEALGPYAAHFVVMYFRDLVAGSIMYYTVSGLWHLYIYHLKRDKFFPDGQLLPTRETIVDQIMLAQASLFMYAGLPVLSEWLIEEGYTRAYYSISEVGGWPQYVALTLLYLTLVEIGIYWMHRKLHTNKILYKYVHALHHKYNKAQTLTPWCSVAFNPLDGILQACPYVIMLFVVPCHYLTHVVMLFFTAVWATNIHDALDGDTEPIMGSKYHTMHHTHYHVNFGQFFVFCDWFWGTLRDPK-----AKPSSAQLKK 316          
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A6V1TBS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TBS5_HETAK)

HSP 1 Score: 345 bits (884), Expect = 7.920e-111
Identity = 154/276 (55.80%), Postives = 199/276 (72.10%), Query Frame = 3
Query:  171 KEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKGMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGYREPSTSASKKI 998
            KEFN W+N F++SES+ +     +G    H  LTY R+ + G I Y+I A+ W + +YI           P+   + DQ+++A ++   YA LPV  + FIE GYTR Y+  +DVGGL GY+ +TA+Y+A VEIGIYWMHR LHTNKFLYK+VHALHHKYN   TL+PWASIAFNPLDG+LQACPY+I  FF+PCHY TH+ +  FTA+WATNIHD + G++EPIMG+KYH +HHTHYH NFGQFF FCD +WGTLKRP+D+R  +  +    KK+
Sbjct:   43 KEFNRWLNSFIYSESLVDYCDKKLGETGGHIALTYFRDLIAGYITYFIVAAPWAYYVYIHGKGRFSEVEAPSRETVLDQVRMACVAVPAYATLPVASQLFIEGGYTRVYYSLADVGGLGGYLFFTAVYIAFVEIGIYWMHRVLHTNKFLYKHVHALHHKYNKPSTLTPWASIAFNPLDGLLQACPYLIATFFVPCHYLTHLILLFFTALWATNIHDTLNGDSEPIMGSKYHLIHHTHYHCNFGQFFIFCDWFWGTLKRPEDLRSRKAEAAEDKKKL 318          
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A4D9D2S1_9STRA (Fatty acid hydroxylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2S1_9STRA)

HSP 1 Score: 341 bits (875), Expect = 5.900e-109
Identity = 156/261 (59.77%), Postives = 195/261 (74.71%), Query Frame = 3
Query:  177 FNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKG---MPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQ 950
            FN W+N FLFS++V       +G   AHYFLTYVR+ + GS+LYY+TA +WH  +Y   G   F +     P+ A I DQIQLAQ S  +YA LPVL E+ +E G+T+CY++  ++GG   Y+ +T LYLA VE+G+YWMHRTLH NK LYKY+H LHHKYN   TLSPWAS+AFNP+DG+LQA PYVI LF +PCHY TH+AM  FTA+WATNIHDA+ GNTEP+MG+KYHT+HHTHYH NFGQFF F D  +GTL+ P+
Sbjct:   64 FNDWVNAFLFSDAVKADVMARLGPAGAHYFLTYVRDLVAGSVLYYLTAGLWHTYVYQWHGDYFFTQQGFEKPSAATIKDQIQLAQTSMFLYAALPVLAEWLVESGWTQCYYYVEEIGGWPYYLAFTLLYLAMVEVGVYWMHRTLHENKVLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVICLFLVPCHYLTHVAMVFFTAVWATNIHDAMDGNTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPE 324          
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A7R9UEU8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEU8_9STRA)

HSP 1 Score: 339 bits (870), Expect = 2.220e-108
Identity = 157/270 (58.15%), Postives = 193/270 (71.48%), Query Frame = 3
Query:  171 KEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKG----MPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGYR 968
            +  N  ING  FSE+      +  G +  +Y +TY+R+ + G ++YYI A +WH +IY  +   +F KG    +P  A IWDQI LAQ S   YA LPV   + +E GYTR YF+  ++GG   Y+ +T  Y   VEIGIYW+HRTLHTNKFLYKYVHALHHKYNSA TLSPWASIAFNPLDG+ QA PYV+ +F +PCHY TH+ M  FT IW+TNIHDAVPGN EPIMGAKYHTVHHTHYH NFGQ F +CD++WGTLK P+++R  R
Sbjct:   69 RALNDLINGIFFSEATRRGFEERFGEELGYYMVTYLRDLIAGILVYYIAAGVWHIMIYHVLRERIF-KGQEDQIPTAATIWDQICLAQASVFCYAALPVFSSWLVENGYTRAYFYVDEIGGWSNYLAWTVAYFVLVEIGIYWVHRTLHTNKFLYKYVHALHHKYNSAATLSPWASIAFNPLDGIAQASPYVVAMFLVPCHYITHLLMLFFTGIWSTNIHDAVPGNIEPIMGAKYHTVHHTHYHYNFGQIFIYCDKFWGTLKTPEEIRQLR 337          
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A7S2UWH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWH0_9STRA)

HSP 1 Score: 338 bits (868), Expect = 2.860e-108
Identity = 159/265 (60.00%), Postives = 187/265 (70.57%), Query Frame = 3
Query:  171 KEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPK--GMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMR 959
            +EFN W+N F FS+++  +  +  G    H   TYVR+ + G I+YY     WHW IYI+ G   FP+    P   VIWDQ+ LAQ S  VYAMLPV  +  IE GYTR Y+  SDVGG   Y  Y A YL  VE GIYW+HRTLHTNKFLYK+VHALHHKYN   TLSPWASIAFNP+DGV QA PYV  LF IPCHY+TH+AM  FT +WATNIHD + GNTEP+MG+KYH VHHTHYH NFGQFF   D  +GTLKRP+D++
Sbjct:   55 REFNVWLNSFFFSKALMAKAEEKFGQLIGHIIFTYVRDLVAGFIVYYAVNLPWHWYIYIRHGNHFFPEEGSQPKWEVIWDQMLLAQCSLFVYAMLPVTSQLLIEYGYTRVYYSMSDVGGWQWYAAYMAAYLLFVEFGIYWVHRTLHTNKFLYKHVHALHHKYNKPTTLSPWASIAFNPVDGVAQASPYVAGLFLIPCHYFTHLAMLFFTGVWATNIHDTLHGNTEPVMGSKYHLVHHTHYHYNFGQFFILFDWLYGTLKRPEDIK 319          
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A7S2WVE6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVE6_9STRA)

HSP 1 Score: 338 bits (866), Expect = 5.510e-108
Identity = 161/264 (60.98%), Postives = 187/264 (70.83%), Query Frame = 3
Query:  177 FNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKG---MPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMR 959
            FN WIN  +   ++ +   D M  K AHY +TY+R+F+ G++LYY+ A +WH  IY   G   F K    MP+  +I DQIQLAQLS  VYA LPV  E+ IEEGYT  Y+   ++GG              VEIGIYWMHRTLHTNKFLYKYVH LHHKYN  E LSPWAS+AFNPLDG+LQACPYVI LF +PCHY TH+ M  FTA+WATNIHDA+ GNTEPIMG+KYHT HHTHYHVNFGQFF FCD +WGTL  P D R
Sbjct:   60 FNQWINQMILPPAMLQYFEDRMTIKQAHYSVTYLRDFVAGTLLYYMVAGLWHLWIYHVRGERYFKKQGATMPSREIILDQIQLAQLSMFVYAGLPVFSEWLIEEGYTLAYWSIDEIGGWXXXXXXXXXXXXXVEIGIYWMHRTLHTNKFLYKYVHGLHHKYNKPELLSPWASVAFNPLDGILQACPYVICLFIVPCHYLTHVLMLFFTAVWATNIHDALDGNTEPIMGSKYHTKHHTHYHVNFGQFFIFCDWFWGTLSAPGDSR 323          
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A7S2GVH5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVH5_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.390e-104
Identity = 153/258 (59.30%), Postives = 187/258 (72.48%), Query Frame = 3
Query:  177 FNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLF-PKGMPAPA--VIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLK 941
            FN W+N  LF   + E T    GA+  +Y + Y+R+    + LYY TA IWH  IY   G   F  +G P P+  +I +QI +AQ+S   YA LPV  E+ IE  YT  Y+  S++GG   Y+++TA+YL+ VEIGIYWMHRTLHTNKFLYKYVH LHHKYN  + L+PWASIAFNPLDG+LQA PYV+ LF +PCHY TH+AM  FTAIWATNIHDA+ GNTEPIMG+KYHT+HHTHY VN+GQ F FCD YWGTL+
Sbjct:   49 FNNWVNHILFPSKILESTDSMFGAEWGYYAICYIRDLFAATFLYYTTAGIWHIYIYNIKGDQFFVQQGYPMPSTEIIREQIMVAQMSIFCYAALPVFSEWLIEHNYTLVYWSISEIGGWPQYLIFTAIYLSLVEIGIYWMHRTLHTNKFLYKYVHGLHHKYNKRQLLTPWASIAFNPLDGILQASPYVVALFLVPCHYLTHVAMLFFTAIWATNIHDALDGNTEPIMGSKYHTIHHTHYMVNYGQIFIFCDWYWGTLR 306          
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A6U4L1I3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L1I3_9STRA)

HSP 1 Score: 325 bits (833), Expect = 1.550e-102
Identity = 157/269 (58.36%), Postives = 187/269 (69.52%), Query Frame = 3
Query:  162 QLVKEFNAWINGFLFSESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKG----MPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDM 956
            Q  +E N  IN  LF+E+      +  G +  +Y  TY+R+   G +LYY+TA +WH  IY  M   LF KG    MP+ AVI DQI LAQ S   YA LPV   + +E  YT  YF+  D+GG   Y+  TA Y A VEIGIYWMHRTLHTNKFLYK+VH LHHKYNS  TLSPWASIAFNPLDG+ QA PYV  + F+PCHY TH+ M  FT IWATNIHDA+ G+TEPIMGAKYHT+HHTH+  N+GQ FTFCDQ+WGTLK  +D+
Sbjct:   74 QPYRELNDLINSLLFNEAQRRGFEERFGYETGYYLCTYLRDLFFGCLLYYLTAGLWHIAIYHVMRERLF-KGREDKMPSRAVIVDQICLAQASLFCYAALPVFSSWLVENNYTAAYFYIDDIGGWANYLAITAFYFALVEIGIYWMHRTLHTNKFLYKWVHGLHHKYNSHATLSPWASIAFNPLDGIAQASPYVFVMLFVPCHYLTHLIMLFFTGIWATNIHDAIDGDTEPIMGAKYHTIHHTHFSCNYGQIFTFCDQFWGTLKTREDI 341          
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Match: A0A482SVV9_9ARCH (Fatty acid hydroxylase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVV9_9ARCH)

HSP 1 Score: 312 bits (800), Expect = 2.000e-98
Identity = 146/267 (54.68%), Postives = 189/267 (70.79%), Query Frame = 3
Query:  171 KEFNAWINGFLFS----ESVFERTGDAMGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLF-PKGMPAPAV--IWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYILYTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIAFNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQ 950
            + FN W+NG  F     E   +   D++G ++ +Y   Y+R+ +GG+ +Y++TA +WH VIY       F  KG P P    + DQ+ LAQ S  VYA LP+L E+ IE G T  YF+ SD+GG   Y  Y  LY+  VEIG+YWMHRTLHTNKFLYKYVH LHHKYN   TL+PWASIAFNPLDG+LQA PYV+ LFF+P HY+TH+ +  F+ +WATNIHDA+ G++EPIMG+KYHT+HHTHY  N+GQFF FCD ++GTL+ P+
Sbjct:   36 RNFNHWLNGHFFRLFKLEGAAQYLHDSLGEESGYYAQCYLRDLIGGTFVYWVTAGVWHVVIYYIFADKFFHSKGRPLPTTETLVDQMSLAQASLFVYAGLPILSEYLIESGVTHTYFYVSDIGGWGWYTAYLVLYITLVEIGVYWMHRTLHTNKFLYKYVHGLHHKYNKLTTLTPWASIAFNPLDGILQASPYVVCLFFVPVHYFTHIFLLFFSGVWATNIHDAMWGDSEPIMGSKYHTLHHTHYLYNYGQFFIFCDWFFGTLRVPE 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig149.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW86_ECTSI4.640e-19088.89Sterol C-5 desaturase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835YRT7_9STRA1.780e-11259.21Sterol C-5 desaturase n=1 Tax=Tribonema minus TaxI... [more]
A0A6V1TBS5_HETAK7.920e-11155.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D2S1_9STRA5.900e-10959.77Fatty acid hydroxylase domain-containing protein n... [more]
A0A7R9UEU8_9STRA2.220e-10858.15Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2UWH0_9STRA2.860e-10860.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2WVE6_9STRA5.510e-10860.98Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GVH5_9STRA1.390e-10459.30Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6U4L1I3_9STRA1.550e-10258.36Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A482SVV9_9ARCH2.000e-9854.68Fatty acid hydroxylase family protein n=1 Tax=arch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig149contigP-littoralis_Contig149:147535..152004 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FW86
Preferred nameSC5D
PFAMsFA_hydroxylase
Model size1917
Max annot lvl2759|Eukaryota
KEGG rclassRC00904
KEGG koko:K00227
KEGG ReactionR07215,R07486,R07491,R07505
KEGG Pathwayko00100,ko01100,ko01110,ko01130,map00100,map01100,map01110,map01130
KEGG ModuleM00101,M00102
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000248,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005794,GO:0006066,GO:0006082,GO:0006629,GO:0006631,GO:0006694,GO:0006695,GO:0006696,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008204,GO:0008610,GO:0009058,GO:0009889,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016491,GO:0016705,GO:0016717,GO:0019216,GO:0019218,GO:0019222,GO:0019752,GO:0030176,GO:0031090,GO:0031224,GO:0031227,GO:0031974,GO:0031984,GO:0032787,GO:0033489,GO:0033490,GO:0042175,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045540,GO:0046165,GO:0046872,GO:0046890,GO:0046914,GO:0046996,GO:0050046,GO:0050789,GO:0050810,GO:0055114,GO:0062012,GO:0065007,GO:0070013,GO:0070704,GO:0071704,GO:0080090,GO:0090181,GO:0097384,GO:0098588,GO:0098791,GO:0098827,GO:0106118,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
Exons6
Evalue2.04e-181
EggNOG OGsCOG3000@1|root,KOG0872@2759|Eukaryota
Ec32 ortholog descriptionSterol C-5 desaturase
Ec32 orthologEc-01_003780.1
EC1.14.19.20
DescriptionC-5 sterol desaturase activity
Cds size765
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig149.38.1prot_P-littoralis_Contig149.38.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig149 147774..151091 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789703.9129782-UTR-P-littoralis_Contig149:147534..1477731680789703.9129782-UTR-P-littoralis_Contig149:147534..147773Pylaiella littoralis U1_48UTRP-littoralis_Contig149 147535..147773 +
1680789703.9876747-UTR-P-littoralis_Contig149:151091..1520041680789703.9876747-UTR-P-littoralis_Contig149:151091..152004Pylaiella littoralis U1_48UTRP-littoralis_Contig149 151092..152004 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789703.9270456-CDS-P-littoralis_Contig149:147773..1478681680789703.9270456-CDS-P-littoralis_Contig149:147773..147868Pylaiella littoralis U1_48CDSP-littoralis_Contig149 147774..147868 +
1680789703.9359348-CDS-P-littoralis_Contig149:149006..1491621680789703.9359348-CDS-P-littoralis_Contig149:149006..149162Pylaiella littoralis U1_48CDSP-littoralis_Contig149 149007..149162 +
1680789703.9440823-CDS-P-littoralis_Contig149:149536..1496211680789703.9440823-CDS-P-littoralis_Contig149:149536..149621Pylaiella littoralis U1_48CDSP-littoralis_Contig149 149537..149621 +
1680789703.9560854-CDS-P-littoralis_Contig149:150051..1501921680789703.9560854-CDS-P-littoralis_Contig149:150051..150192Pylaiella littoralis U1_48CDSP-littoralis_Contig149 150052..150192 +
1680789703.9692445-CDS-P-littoralis_Contig149:150577..1507271680789703.9692445-CDS-P-littoralis_Contig149:150577..150727Pylaiella littoralis U1_48CDSP-littoralis_Contig149 150578..150727 +
1680789703.978305-CDS-P-littoralis_Contig149:150953..1510911680789703.978305-CDS-P-littoralis_Contig149:150953..151091Pylaiella littoralis U1_48CDSP-littoralis_Contig149 150954..151091 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig149.38.1

>prot_P-littoralis_Contig149.38.1 ID=prot_P-littoralis_Contig149.38.1|Name=mRNA_P-littoralis_Contig149.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=255bp
MGAKAAHYFLTYVRNFLGGSILYYITASIWHWVIYIKMGLTLFPKGMPAP
AVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLVGYIL
YTALYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSAETLSPWASIA
FNPLDGVLQACPYVIFLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNTE
PIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGYREPSTSAS
KKIT*
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mRNA from alignment at P-littoralis_Contig149:147535..152004+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig149.38.1 ID=mRNA_P-littoralis_Contig149.38.1|Name=mRNA_P-littoralis_Contig149.38.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4470bp|location=Sequence derived from alignment at P-littoralis_Contig149:147535..152004+ (Pylaiella littoralis U1_48)
TGGCCAAGAGGACGGCCAGAGCCGGCAGCTCGGTCGCCCTGAACGCCTGG GTGGCGACGGCGTTGGCCTTGGTATCCGTCGTCGCTCTCACCGCGGCGGC ATCCGTGTCCATCTCTCGCGACTCAGAGGCTAGAACGGCGGCTGCGACGA CGAACACACCTCAGTTGGTGAAGGAATTCAACGCATGGATTAACGGCTTT TTGTTTTCCGAGAGCGTTTTCGAGCGGACGGGGGACGCCATGGGGGCGAA GGCGGCGCACTACTTCCTGACTTACGTCCGGAACTTCCTCGGGGGTTCGA TTCTCTATTACATCACGGCGTCCATTTGGCATTGGTGAGCTGAGTCGGGC TTCAAGAGGTGTGAAACGTCTTTTTTTTGTGAGCATGGCATGACGCTACT GGATACCAGTACATTTTTGAGCGGATACAAAATGCTCATCTCGCATTACG TCTCTCCTCCGTCGAAGTGCCATCCAACGGTGGCAAAACCACATGTGAAG CCCTGCTGAAGGTTTATGTTTGCGGGGTGTAAGCGTGACAATCCGAACCA ACCTGCCGGTGTGTATCAGTTTTCGTAAACGAGAATAGACTACCGTAATT GTGCGGATCATCGCACCCCTCGGGGTTTTGGCGCCCATCGGGGTTATGGC ACCGGGTTGCGAAAAAAAACACGAGAAAAAAATATTTAATTGTATTTTCG CACCCCCGTCGGGGTTATCGCACCCGGGTGCGATAACCCCGACAAAAATT CAAAATTGAGTGCTGCGGTGACGCGCCACGCCAACATCGTATGTATGTAC CGTATGCAAACCTACCGTATGTTTCTTCCAGGTAGTTGCGATCGGTGAAA GATCAATCCATCACGTATCATTATCGCGCCGACGCACGCGTTCAAGTACC GCAAGTCATCGTATTAAAACTAGGTACCGGTACCTGCCAACCTGACAAAC ACCGTTCCGACAACGAGGAGCGATTGGTTCAACACACACCGATACAAACC CGATATTGCACGGGACATATTTGATTCAGCTCCGCACCCATCGGGGTCAT CGCACCGGGGTGCGCAAAAAACACCAAGAACGAAACATTTAATTGTATTA TCGCACCCCTGCCGGGGTTATCGCACCCATCGGGGTTATCGCACCGGGGT GCGAAAAAAAAATCAAGAAAGAAACATTTAAAATCGCGATCGCACCCGGT GCGATGACCCGCACAATTACGGTATGTGGGCAAGTGGTATTGTTTTCTGC ATTGGCACAACCCGATCGACGCTTCCCCGTTATTTGTCAAGCACGCTCTG CATCTGCAGTGTTGCACGTGGTTGGTTTTTACCCCCCAGGATGTTGTGAC ATTTCTTGCGGCAGCCGTATGAAGCGGTAGCGAGCAGGGGCGCCGCAAGT CGCCGTTCCACTGACGCAATCGAGTTGCTGTCAACACTCTTTTTTCGCTT TTCGGTTGGTCGCCTCACGAAGGGTGATCTACATCAAGATGGGGCTCACA CTCTTCCCGAAGGGGATGCCAGCGCCGGCGGTGATCTGGGACCAAATCCA GCTGGCCCAACTGAGCACCACAGTGTACGCCATGCTACCGGTGTTGGGGG AATTCTTCATCGAGGAAGGGTACACGAGGTACGAACACGAACGACACTGG AAAAAGGAAAACGAAGGGCAGGCAATAAATTTGATATCCAACCAAAAACA CGCTGAAATATAGTGCCGTATTTTAAAGTAATTTCACAGAGGAGCGCAGC ATACCGATGGTGTGCCGAGTCAGGCTGTAGTACGCAGTTGATCGAGTACT TACTTGGCTGTGCTGCTTTGTGTCTTCCGAAATGTAGCGGTGAGCTGGAA CCGCGTAGTTGTTTTACAGTGTGACACACGCCGAGAATACCAACGGAGCT AAATGACGAGCCCTTGACCGTTTGAGACTACCTGTTTCTTTTGCTGGGTA CCGGGCTGCAACTCTGTCGCGATCTAAACTTCGATGTCGTGCGTTGGTGC AGGTGCTACTTCCATTTTTCGGACGTGGGCGGCCTGGTCGGTTACATTCT TTACACCGCGTTGTACCTGGCCTGCGTCGAGATTGGGGTGAGTGCTATCC AAGGTTCACTGGCGTTTTGTCTCCTTCGGGGCTGTCGCCACGTTTATTGC CATTGTTTGTGTGGAATTTTGTGTTGGAATACTGCTGTGGGTTTTTTTCG TTGTGTCTTGGTTCAGGATTCCTGGGCTTGATCGGTCTGTCACGTGCACA GTGTATTTTGGTGCAGGGTATTATATGCTTGCCGTGTATTTTGGTGTTCC TGCTAAAACCACTGGTCGCTTCCCCCAAGATGCTGCTGCTCCCAAACTCT TTCACGAGGATAACACTTTCTTTCCTTCCCCGCTTGTCTTCCGGAGTTTT TGTTGTGCGCTGAGCTCACTACTGCTGTTAGGCGCTTTGGTTTTCCGTGT CGCAAACAAGTCAACTGCTGTGCGACGCACTTTTTCCCTCCAACTTCGCC GCCTGTGGCGCGTGCAGATCTACTGGATGCACCGGACGCTTCACACGAAT AAGTTCCTGTACAAGTACGTGCACGCGCTCCACCACAAGTATAACTCCGC GGAAACCTTGTCTCCGTGGGCGTCGATCGCCTTCAACCCCCTCGATGGCG TCCTCCAGGTGTGTGTCATGGTGTTACAATGCATGGCGGAATACTGGCCT CACTTTGTGACTTCTTGTACATAATTTTTTGTTTGGGGAGCGTGGCGGGG CGAACGGCATGCATACAGAGTAGTACCTCTATTTTTTCTGTCGGCATCCT ACTCAAAACTTCTTTGTCGGCGGCGGGTCTGCTCTCATGTTGTGCGCTTT ATTCCGCATGCCACCGGCCCGTTTTGTGGCATGTCTGCTCGATTGCGTGT CTCTTTCTCGATCCACATCAACGCCGGTTGTTCTCCTCGTACTCTCCAAT CTCTCGCCAAAACGTTCTCTCTCTCTTTCCCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTGCCTTCGTGCGTATGCAAACGCATCAGGCTTGCC CGTACGTGATCTTCCTGTTCTTTATCCCGTGCCACTACTACACGCACATG GCAATGTTCATGTTCACAGCTATTTGGGCGACGAACATCCACGACGCTGT GCCGGGTAACACGGAGCCCATCATGGGCGCCAAGTATCATACGGTAAGTC GGAGCGGAGGAATTGACGCACTATCTTCTTCAAACACGGTCGACTTACTT CGGACCAAGTACGGTTGATATGCAAGCTTGATCACCACGCTAATGCGCCT CCAGAGCGAGCACGCAACTCGCACCATGTGTGGCATGCATCATCAGTCCA GATACGCGGGTGGGTGATTTGGTGCCTCTTGACTGCTGTATATCTCCCTC TCGTTCTTCCTACGAGCAGGTGCACCACACGCATTATCACGTGAACTTTG GACAGTTCTTCACTTTTTGCGATCAATATTGGGGCACGCTCAAGCGCCCG CAGGACATGAGAGGCTACCGAGAGCCATCGACGAGCGCGTCGAAGAAGAT CACATGATGGCGCTACTTTCAGGGGGCGGAAGGAGCATAGAGAAGGCCCT CGGGTGATGTCACTCGTCGGACTTTTTCTTGTTCTCGACATGTTCGCGTC TTCTTTTGTGAGGCTGCCCGGGATCGGTTATCGGAAAGTTGCATGCGATA CCGAGACGTCCTTGTGTGGCGTTGAAGCCCTCCACGTAAATAGTCAGCGA CTCGAATACCGGAGGGAGGTGTATGTTGGCGGGGGCGGGTCTGTTGAGAA GGCGCTCCGGGGTTGCAGGCCCTCTTGTGTAAAGCGTACGCCGTAAATCA TCCTTGTCAAAGGCGTGATAGAGGCAGCGAATGTAACATTTGTGTCCTTT AGCTATGTAATAGCGGTGCATCATGCACTAAGAAAGGAGTGCAGAGTCTA CAAGACCGGTCGTGTTGTGTCGCTCACAACTGTCTACCGTGCGTGTTCTG CAAACCGTTGTATTCTCCACTTAGTTCAGAATCCCGTTGCACTTAAATAC TTGTTGTCAACTTGTGTAAATGCTGATATTTATTTGAAACGATTCCTGTA CCTTCAGGGTGGGGTCTCTGATCGCGGGTAACAGTACTTGTGCCTGTTGT CAATTTTTCCACCGTTTTCGACCAAATTTACTGCTGTCGGCTTTTTGAAA TGAAAGTGTGACCTCGTTTTGGCTTGATGACATACCGGTGCATTTTACTC CGGCTGATATTTCTTCGTATATTCCTCCACGAGCCAGAGCGTCGCGCTCT CAACGGTTGTTGCGTACCTCGGTCGGCGCAAAAATGCCCAATGAAAAGGT TTGTGTCAAAATCGTTCAAAAAGCATCATGCTGCACTTCTGCTCTTTGTC TATCTAAGAACATATCTAAGGTCGGAGGCCGCCGTAGTCAGGGCAATCTA GACAGGGCTCGAGGCTTTTC
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Coding sequence (CDS) from alignment at P-littoralis_Contig149:147535..152004+

>mRNA_P-littoralis_Contig149.38.1 ID=mRNA_P-littoralis_Contig149.38.1|Name=mRNA_P-littoralis_Contig149.38.1|organism=Pylaiella littoralis U1_48|type=CDS|length=765bp|location=Sequence derived from alignment at P-littoralis_Contig149:147535..152004+ (Pylaiella littoralis U1_48)
ATGGGGGCGAAGGCGGCGCACTACTTCCTGACTTACGTCCGGAACTTCCT
CGGGGGTTCGATTCTCTATTACATCACGGCGTCCATTTGGCATTGGGTGA
TCTACATCAAGATGGGGCTCACACTCTTCCCGAAGGGGATGCCAGCGCCG
GCGGTGATCTGGGACCAAATCCAGCTGGCCCAACTGAGCACCACAGTGTA
CGCCATGCTACCGGTGTTGGGGGAATTCTTCATCGAGGAAGGGTACACGA
GGTGCTACTTCCATTTTTCGGACGTGGGCGGCCTGGTCGGTTACATTCTT
TACACCGCGTTGTACCTGGCCTGCGTCGAGATTGGGATCTACTGGATGCA
CCGGACGCTTCACACGAATAAGTTCCTGTACAAGTACGTGCACGCGCTCC
ACCACAAGTATAACTCCGCGGAAACCTTGTCTCCGTGGGCGTCGATCGCC
TTCAACCCCCTCGATGGCGTCCTCCAGGCTTGCCCGTACGTGATCTTCCT
GTTCTTTATCCCGTGCCACTACTACACGCACATGGCAATGTTCATGTTCA
CAGCTATTTGGGCGACGAACATCCACGACGCTGTGCCGGGTAACACGGAG
CCCATCATGGGCGCCAAGTATCATACGGTGCACCACACGCATTATCACGT
GAACTTTGGACAGTTCTTCACTTTTTGCGATCAATATTGGGGCACGCTCA
AGCGCCCGCAGGACATGAGAGGCTACCGAGAGCCATCGACGAGCGCGTCG
AAGAAGATCACATGA
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