mRNA_P-littoralis_Contig148.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig148.4.1 vs. uniprot
Match: Q6XLU7_9PHYC (FirrV-1-H3 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLU7_9PHYC) HSP 1 Score: 292 bits (747), Expect = 3.880e-91 Identity = 167/385 (43.38%), Postives = 239/385 (62.08%), Query Frame = 1
Query: 1 NFSFLATLNKGQNLPLALEAGTVFRSDKGIAGFSGPFPMPFGISNFSDTYFRFYALRFDNFVHATSAGRDSLVTLYASDETTIVDGPFFVSAYGSTLLKCNANTE---FVVAIEDI---TLTSNRYVDMRLV--PPMATEVLLHSRNNWLSARFPDASVTYHRSNMTTGSFMVQAGAPLSI-AGAT----------GNQNNCNVD*WLLLKGDKPFSGLSGADGSGYEATPCWPVTALAQCFPILSTIGTNANARRASISLASPYEGNARLYDESNALLGTFAISRGTSPPVSPDDQKFPASGQFIPGTSLGASLTSGYVETDIPCVCIMNFDGSSV-FSSDAGDEMAIPGTSPDDVKAQIGKDPDGFLRRRDVDTSGNETWVLC 1095
+F +L TL+ GQN+ L GTVFRS KGI+GFS PFPMP G+S+ S TYFRFYA R + V TSAG +S+VTLY S T IVDGP ++ +G+T L C + + VV+ D+ T T+ D RL+ M+T +++ +R ++A+ D +V ++R N TGSF V AG P+SI GA GN + + L+L +KP S SGAD +G+EA P WP+ AQ F + I N++A +S+++AS +EG +++D + AL+ T ISR T+P + +DQK PA+GQ+ P S GYV +++P +CIMN +GSS ++SDAGDE+ IPG +PD+++A I DG RRRD+D SG E+W +C
Sbjct: 149 DFVYLTTLSMGQNMNFNLPVGTVFRSTKGISGFSAPFPMPLGLSSLSGTYFRFYAFRLTSLVFVTSAGLESVVTLYDSSGTVIVDGPTTLAPFGTTTLNCGEDMQGEFIVVSSTDVYCGTKTTTGDADNRLIIGSMMSTAIIVWNRYCRVTAQELDTNVRWYRQNGETGSFTVNAGTPVSIYTGAVNEDVGGPSNAGNNKDYGLAGCLILASNKPISAFSGADSNGWEAVPGWPLKQTAQLFANPANIDNNSDAGISSVTIASQFEGQFQIFDSTKALIATETISR-TNPVTTAEDQKCPAAGQWQPVNSGLTDWNGGYVVSNVPAICIMNLNGSSAPWTSDAGDELMIPGVTPDEIRACIQIGEDGLYRRRDIDVSGTESWNIC 532
BLAST of mRNA_P-littoralis_Contig148.4.1 vs. uniprot
Match: Q6XLX5_9PHYC (FirrV-1-C3 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLX5_9PHYC) HSP 1 Score: 287 bits (735), Expect = 2.470e-89 Identity = 170/391 (43.48%), Postives = 242/391 (61.89%), Query Frame = 1
Query: 1 NFSFLATLNKGQNLPLALEAGTVFRSDKGIAGFSGPFPMPFGISNFSDTYFRFYALRFDNFVHATSAGRDSLVTLYASDETTIVDGPFFVSAYGSTLLKCNANT--EF-VVAIEDITLTSNRY-----VDMRLVPP--MATEVLLHSRNNWLSARFPDASVTYHRSNMTTGSFMVQAGAPLSIAGATGNQN---------------NCNVD*WLLLKGDKPFSGLSGADGSGYEATPCWPVTALAQCFPILSTIGTNANARRASISLASPYEGNARLYDESNALLGTFAISRGTSPPVSPDDQKFPASGQFIPGTSLGASLTSGYVETDIPCVCIMNFDGSSV-FSSDAGDEMAIPGTSPDDVKAQIGKDPDGFLRRRDVDTSGNETWVLC 1095
+F++L TL+ GQN+ L AGTVFRS KGI+GFS PFPMP G+S+ S TYF FYA R + + ATSAG +S V LY S T + DGP ++ +G+ L C + EF VVA ++ + Y DMRLV P M+ EV++ +R + A+ + +V ++R N TGSF V AG P++I TGN N + D L+LK DKP S SGAD +G+EATP WP+ +AQ F +TI + +A AS+SL S YEG +++D S L+ T I+R T+ + +DQ +PA+GQ+ P S ++ T GY+ ++P +CIMN +GSS +++D GDE+ IPG +PD+++A I D +GF RRRD+D+SG ETW +C
Sbjct: 147 DFTYLTTLDMGQNMNFNLPAGTVFRSLKGISGFSAPFPMPLGLSSLSSTYFTFYAFRLTSTIFATSAGLESTVFLYDSSGT-VADGPTTIAPFGTATLHCGDDVQGEFKVVASTNVYCGTRSYNTIRSTDMRLVIPCEMSCEVMVWNRFCRVIAQELNTTVRWYRRNGDTGSFTVHAGTPVNIY--TGNINEDEGVSTPNNAGGTADYKPDGCLILKSDKPISAFSGADSNGWEATPGWPLIQMAQVFANPATINNSTDAGIASVSLGSQYEGEFQVFDSSKTLIATAPITR-TNSVTTTEDQLYPAAGQWQPVNSGLSTFTGGYIIANVPAICIMNLNGSSAPWTADEGDELMIPGVTPDEIRACIKVDQNGFYRRRDIDSSGTETWTIC 533
BLAST of mRNA_P-littoralis_Contig148.4.1 vs. uniprot
Match: A0A840I3H0_9PROT (Uncharacterized protein n=1 Tax=Parvularcula dongshanensis TaxID=1173995 RepID=A0A840I3H0_9PROT) HSP 1 Score: 186 bits (472), Expect = 1.580e-49 Identity = 127/378 (33.60%), Postives = 195/378 (51.59%), Query Frame = 1
Query: 52 LEAGTVFRSDKGIAGFSGPF------PMPFGISNFSDTYFRFYALRFDNFVHATSAGR--------DSLVTLYASDETTIVDGPFFVSAYGSTLLKCNANTEF-VVAIEDITLT-------SNRYVDMRLVPPMATEVLLHSRNNWLSARFPDASVTYHRSNMTTGSFMVQAGAPLSIAGATG-NQNNCNVD*WLLLKGDKPFSGLSGADGSGYEATPCWPVTALAQCFPILSTIGTNANARRASISLASPYEGNARLYDESNALLGTFAISRGTSPPVSPDDQKFPASGQFIPGTSLGASLTSGYVETDIPCVCIMN-------FDGSSVFSSDAGDEMAIPGTSPDDVKAQIGKDPDGFLRRRDVDTSGNETWVLC 1095
L AG V S G+ G S PMP G+ F+ F FYA R A AGR + V L T VD + A+G L+ +A+ EF V+A + I + + D+RLVPP++T+++ H+R ++SA + D V+++ + GSF V G+P+ +A TG N N+ + + +++L+ P S SGADG G EATP +PV ALAQ P+ + + +LASP+EG A +Y +L T ++R + +PDDQ P S + + G S+ + G++E D+P +MN F G + GDE+A+PG +P++ + ++ +D GFLRRR + G E WVLC
Sbjct: 322 LSAGAVIVSTGGVGGASDTASGSDRSPMPLGLEGFAGRQFFFYAFRRS----AGGAGRVFVSAGAVPATVRLLNGAGTAEVDSAA-LGAFGFAELQTDADAEFQVIADQPIFVGVASGLGGGDVVSDLRLVPPLSTQIIGHARQGYVSALYADTVVSWYLQDGRRGSFTVSPGSPVDLAAETGANSNDYSPEDFVILRASGPISSYSGADGEGGEATPHYPVGALAQRVPVPLATKAQGTGKDSCFALASPHEGTAAIYRSDGSLFATLPLTRQNAV-TTPDDQLCPCSAR-LDGQSMPSDFPGGWIEADVPIYVVMNSSQNEAQFTGGVITY---GDEIALPGVTPEEARTEVRRDEAGFLRRRRLGADGAEAWVLC 689
BLAST of mRNA_P-littoralis_Contig148.4.1 vs. uniprot
Match: UPI00068FCDA4 (DUF2793 domain-containing protein n=1 Tax=Parvularcula oceani TaxID=1247963 RepID=UPI00068FCDA4) HSP 1 Score: 107 bits (268), Expect = 6.980e-22 Identity = 83/274 (30.29%), Postives = 132/274 (48.18%), Query Frame = 1
Query: 52 LEAGTVFRSDKGIAGFS--GPFPMPFGISNFSDTYFRFYALRFDNF----VHATSAGRDSLVTLYASDETTIVDGPFFVSAYGSTLLKCNANTEFVVAIED---------ITLTSNRYVDMRLVPPMATEVLLHSRNNWLSARFPDASVTYHRSNMTTGSFMVQAGAPLSIAGATGNQNNCNVD*WLLLKGDKPFSGLSGADGSGYEATPCWPVTALAQCFPILSTIGTNANARRASISLASPYEG---NARLYDESNALLGTFAISRGTSPPV 819
L+ G V S G+AG S PMP G+ F+ +F FYA R V + + V L + D T IVD + A+G L +A+ EF V + + + Y D+RLVPP+ATE++ + +SA +PD ++ ++R + T+G+ G ++ N + D L+L+ D P S SGAD SG +ATP +P++AL+Q P+ + I++ASP++G + R S+ + +R PPV
Sbjct: 319 LQPGAVLTSTAGLAGSSETDAGPMPLGLEGFAAEHFFFYAYRDSENGRGQVFVAAGAVPAKVRLMSGDGTVIVDEAE-IDAFGLATLFTDADAEFQVVADRPVFVGVAARMDAAAPAYWDLRLVPPLATELIGYGTQGRVSALYPDTTIRWYRRDGTSGTLTAGPGYADLLSATGANDPDYEADACLILRADGPISAYSGADTSGVDATPFFPLSALSQRVPLPLAGHAYGDGSDNGIAVASPHKGRRGSIRPMAASSPRFRSPGAARRRRPPV 591 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig148.4.1 >prot_P-littoralis_Contig148.4.1 ID=prot_P-littoralis_Contig148.4.1|Name=mRNA_P-littoralis_Contig148.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=149bp MPFGISNFSDTYFRFYALRFDNFVHATSAGRDSLVTLYASDETTIVDGPFback to top mRNA from alignment at P-littoralis_Contig148:6456..7584+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig148.4.1 ID=mRNA_P-littoralis_Contig148.4.1|Name=mRNA_P-littoralis_Contig148.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1129bp|location=Sequence derived from alignment at P-littoralis_Contig148:6456..7584+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig148:6456..7584+ >mRNA_P-littoralis_Contig148.4.1 ID=mRNA_P-littoralis_Contig148.4.1|Name=mRNA_P-littoralis_Contig148.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=447bp|location=Sequence derived from alignment at P-littoralis_Contig148:6456..7584+ (Pylaiella littoralis U1_48)back to top |