mRNA_P-littoralis_Contig144.42.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig144.42.1
Unique NamemRNA_P-littoralis_Contig144.42.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 457 bits (1176), Expect = 1.240e-157
Identity = 222/335 (66.27%), Postives = 259/335 (77.31%), Query Frame = 1
Query:  217 QILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDTDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFAYRKKNNDVVWLSRPK 1179
            Q+LG+GNCFDD+ QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GT+  R+GC+LIVDNGYHEWVTL+APSKYP   +D AFS+ LESVRKDV CF        RILKLR+ YH RE  DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD  +H P TD+TSVG +    P  + E+             +P HA+LK QLIESFA+RKK ND+ WLSRPK
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 368          
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 437 bits (1123), Expect = 6.710e-148
Identity = 205/344 (59.59%), Postives = 259/344 (75.29%), Query Frame = 1
Query:  154 GGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDTDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYL-----FNPQHAKLKGQLIESFAYRKKNNDVVWLS 1170
            G  DA+GR GIPV+LK+L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+GA GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT GFTG+TNDK+I+RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LESVRKDVECFFGI+KGRFRILKL + YH +ED DN+FFTCCILHNMLHS+D  S  +E  +WAG+AGLH+  +H P  D +SVG + ++   E +     FN +    + QLI SF YRK  ND+ WLS
Sbjct:  143 GKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTR----RKQLIASFVYRKSKNDIAWLS 482          
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 407 bits (1045), Expect = 6.900e-136
Identity = 193/340 (56.76%), Postives = 244/340 (71.76%), Query Frame = 1
Query:  154 GGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDTDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRK-KNNDVVWLS 1170
            G +D  GR+ +PVELK+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E  DN+FFTCCILHNMLHSFD      E  +WAGSAGLH+  D  P+TD++SVG       E          L+ +L+ +F YR+ K  D+VWLS
Sbjct:  159 GESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQH-EAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 497          
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 1.580e-130
Identity = 185/329 (56.23%), Postives = 234/329 (71.12%), Query Frame = 1
Query:  187 PVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDTDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRK-KNNDVVWLS 1170
            P   ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E  DN+FFTCCILHNMLHSFD      E  +WAGSAGLH+  D  P+TD++SVG       E          L+ +L+ +F YR+ K  D+VWLS
Sbjct:   79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQH-EAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406          
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 1.580e-129
Identity = 212/390 (54.36%), Postives = 245/390 (62.82%), Query Frame = 1
Query:  298 HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDTDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFAYRKKNNDVVWLSRPK 1179
            HKFC++FA EMF+EHIYL TGTY DEVM  + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GTE TR+GC+LIVDNG          +H+               WVTL+APSKYP   +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE  DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD  +H P TD+TSVG +    P  + EE             +P HA+ K  LIESFA+RKK ND++WLSRPK
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEEEECGEGGHVRKERHPYHAESKRHLIESFAFRKKINDIIWLSRPK 635          
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 1.050e-128
Identity = 210/389 (53.98%), Postives = 248/389 (63.75%), Query Frame = 1
Query:    7 LPGGRNFSRKILPCP-RPMRRRYSESAFACLTPSS*GWWSCRGRRSGSTNGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDTDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEY---------LFNPQHAKLKGQLIESF 1131
            LPGG +F     P   RP+ + + ESAF  LTPS   W S +GR  G          R G  ++L +L      G+GNCFDD+ QLS MS SMA ATFHKFC++FA EMF+EHI+ PT TY DE M  + +LG TGA  STDVTH+   MCPFTLGRSFTGKEGFPT+A+EVTVDHA RA+ VT GFTGA NDKT++ YD+ V  IR    Y +R+YKLRKA+GTE TR+GC+ IVDNGYHE                            DVECFFGILKGRFRILKLR+ YH RE  DNIFFTCCI HNMLH+FDG+ +F+EN DW GSAG HD  +  P  D+TSVG +    P  D E+               HA+LK QLIESF
Sbjct:   48 LPGGSSFRMSTSPTTLRPLHKCF-ESAFVYLTPSFKNWSSWQGRSGGF---------RRGRRMQLTVL------GKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE----------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHDAWERDPLMDYTSVGSKGVLLPPKDGEKEERGEGGHVRKERQDHAELKKQLIESF 392          
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 3.090e-124
Identity = 190/342 (55.56%), Postives = 235/342 (68.71%), Query Frame = 1
Query:  163 DAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDTDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNN-DVVWLSRPK 1179
            DA GR   PVE K+L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF GA+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKTI+  D AV  IR +K Y ++ + + K DGT  T KGCYLIVDNGYH+W  L+ PSKYP    D  FSK LESVRKDVECFFGILK RFRILKL + Y  +E  D +FFTCCILHNMLH+ DGM   +E+V+W GSA L +   H  + D +SVG +   D  +      HA+LK +L  +F YRKK+  D+VWLSR +
Sbjct:  115 DAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGH--NLDSSSVGTKDLNDKPQV--EAAHAELKRKLTTNFLYRKKHKKDIVWLSRKR 452          
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 6.810e-123
Identity = 180/264 (68.18%), Postives = 206/264 (78.03%), Query Frame = 1
Query:  154 GGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDTDNIFFTCCILHNMLHS 945
            G  DAA REGIP+ELK+L      G+GNCFDD+ QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG TGA GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LIVDNGY+E              +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE  DNIFFTCCILHNMLH+
Sbjct:  123 GEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 1.160e-122
Identity = 193/368 (52.45%), Postives = 234/368 (63.59%), Query Frame = 1
Query:  163 DAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDTDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNN-DVVWLSR 1173
            DA G    PVE K+L  L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFTGA+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TNDKTIV +D AV+ I  +K Y                             ++ + +   DGT  T KGCYL+VDNGYH+W  L+ PSKYP   +D  FSK LESVRKDVECFFGILKGRFRILKL + Y  +E  DN+FFTC ILHNMLH+FDGM    EN +W  SAG+       P+ D  SVG +   D  +     +H   K QL  SFAYRKK+  D+VWLSR
Sbjct:   73 DAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEI--EHTVRKRQLTTSFAYRKKHKKDIVWLSR 438          
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 2.200e-121
Identity = 176/257 (68.48%), Postives = 198/257 (77.04%), Query Frame = 1
Query:  451 MCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDTDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR-----PATDPEEYLF---------NPQHAKLKGQLIESFAYRKKNNDVVWLSRPK 1179
            MCPFTLGRSFTGKEGFPT+A+EVTVDH GRA+ VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LI+DN YHEWVTL+APSKYP    D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE  DNIFFTCCILHNMLH+FDG+ VF EN DW GSAG HD  +H P TD+TSVG +     P    EE            +P HA+LK QLIESFA+RKK ND+ WLSRPK
Sbjct:    1 MCPFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 257          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig144.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K796_9PHAE1.240e-15766.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE6.710e-14859.59Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE6.900e-13656.76Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE1.580e-13056.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE1.580e-12954.36DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K872_9PHAE1.050e-12853.98DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JBE2_9PHAE3.090e-12455.56Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE6.810e-12368.18DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KNX4_9PHAE1.160e-12252.45DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JQM6_9PHAE2.200e-12168.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig144contigP-littoralis_Contig144:119088..121705 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1200
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.71e-106
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size915
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789677.838225-UTR-P-littoralis_Contig144:119087..1191051680789677.838225-UTR-P-littoralis_Contig144:119087..119105Pylaiella littoralis U1_48UTRP-littoralis_Contig144 119088..119105 -
1680789677.881938-UTR-P-littoralis_Contig144:120590..1206561680789677.881938-UTR-P-littoralis_Contig144:120590..120656Pylaiella littoralis U1_48UTRP-littoralis_Contig144 120591..120656 -
1680789677.8945396-UTR-P-littoralis_Contig144:121504..1217051680789677.8945396-UTR-P-littoralis_Contig144:121504..121705Pylaiella littoralis U1_48UTRP-littoralis_Contig144 121505..121705 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789677.855019-CDS-P-littoralis_Contig144:119105..1195581680789677.855019-CDS-P-littoralis_Contig144:119105..119558Pylaiella littoralis U1_48CDSP-littoralis_Contig144 119106..119558 -
1680789677.867923-CDS-P-littoralis_Contig144:120128..1205901680789677.867923-CDS-P-littoralis_Contig144:120128..120590Pylaiella littoralis U1_48CDSP-littoralis_Contig144 120129..120590 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig144.42.1prot_P-littoralis_Contig144.42.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig144 119106..120590 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig144.42.1

>prot_P-littoralis_Contig144.42.1 ID=prot_P-littoralis_Contig144.42.1|Name=mRNA_P-littoralis_Contig144.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=305bp
MSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAI
GSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFT
GATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDN
GYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKL
RLAYHCREDTDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKD
HAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNNDVVWL
SRPK*
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mRNA from alignment at P-littoralis_Contig144:119088..121705-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig144.42.1 ID=mRNA_P-littoralis_Contig144.42.1|Name=mRNA_P-littoralis_Contig144.42.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2618bp|location=Sequence derived from alignment at P-littoralis_Contig144:119088..121705- (Pylaiella littoralis U1_48)
AGCAGTCTGCCTGGTGGACGCAACTTCAGCAGGAAGATCTTGCCGTGCCC ACGTCCGATGCGGCGAAGGTATTCCGAGAGCGCTTTCGCGTGCCTCACGC CTTCTTCCTGAGGTTGGTGGAGCTGTCGAGGGAGAAGAAGTGGTTCGACT AACGGAGGAGCGGATGCAGCAGGCCGTGAGGGTATCCCAGTAGAGCTCAA GGTGCGCTTGAAAATGACACTTCGTACGAAGCGTAACATACTGGTAAAAG AAGATAGATGGTATGTGTACAAGTACAAAATACACCAGCTTTCCACTGCT GTACGTCACACAACTGCTGTCCACACACCGCCGTCCCCCTCATGACTGCA GCACAACTGCTGCATCTGATAAAAGTCTGCATGCCTTTCGGGGCCGGTAT ATCTGTGAAGCACTTGCAGCTGTAGGGTATGCGAGACCAATCAAGTGCGC AACGATTTGTGTGGATCGACACGACGAGGACTAGCGAATCAACCTATTCT GGATAACAAAGTGCCGCAGACGGATATCACCACAGCAGTGTGTGTTGCTG ATGCTGCCGAAGATACCGCTGCAGGTTTTTGGGTACTCTTCTGTGCCCCA CCCCTAGGTCGGTGGTTATTACGAGGAACTTACATTCCGAGCCTTTCTTG ATTGGTCGTTTCGGGTCGAGTAGATGCGGAAACACGGGAATGCAACCATA CATGACTGCTGTACTGCTGTAGACTGGCGTGCAGAATAGATGGGATGGCA ACACAACACAACTGTATTTATCACGCTTTCACGTAAAACAAAACATGCCG TTGCTGCGCCACCACGTGACGCTATTCCGACACAACAGCTGTCACGATGT GTGTATGTGAATATCAAAACATCATCCGTAATACGAAATCATGTATCTGC CTGATTCGTATACACGGACTACTTAAAATGGTAGTTGTCCAGCCGAGCGA ATCGTGCAACAGCAACTAGTTGACTGATGGACACTCCCGCCCCCCCCCCC CTTCTCCCCGCCGCCGCGCGCTCCCCCTCCCCCTTACATTATTCGACAGA TCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTCGACGACATC AACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAACGTTCCACAA GTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATATCTACCTTC CAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGTAAACTGGGT TTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGTCGGCTGGGGCAT GTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGGGTTTCCAA CCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGGCGCGCCATTGGCGTC ACCCAAGGGTTCACCGGTGCGACCAACGACAAGACGATCGTCCGCTACGA CGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGGATCGAGAGT ACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGGAAAGGATGCTAT TTGATCGTCGACAACGGCTATCACGAGGTGAGTGTATTGGGGGCGTGGGT AGTATAGAATATCCGAACGTAGTGCGTGCTCCGTAACGCTTCGGGTTGAT GTGAAGCCCGAAAAAAAACACGCCGGTACACCGAAAGCAGACCAATGCCA TATTTGTCGGTACTGAATGAGGATCCTTATGGCATGTCGGCCCCGTGCAT CGGGCGTCGACCTTACGCAGCGGCACACCAAGGTAAAAAACGTTTTGCCG CTTCGCGTTCCTTCTATTCGTAATTGTTTTTGTGCTGGTTCCGTTTGGAC GGTTGCGTTCACTTTCGTACATTTCGAGCATACATTACCCTTTTTATAAC ACCAAAGGTTTTAAAAAACAAATCTGCTCAGAGGTGCTCAGATGGCAAAT ATTGTACTTCGAAGTACAAGGTTGTAGGCATCTGTGTTGTCCACATGTCC ACACGGTTCGTCGTTCCCCCCGAGGAGTTTGATCGTGAAAATTTGTGCGT CGGGGCCTGAGGTTTCCAGAGCCTCTCCGTAGCTCACCAGTCGTCCCTTT CGACCCCCCCCCTGCTACTGTTGTGCCGTCGTGTGCCAAATCAACAGTGG GTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACGTGGATGACGCGGC CTTCTCCAAGATGCTTGAGAGTGTGCGCAAGGATGTGGAGTGTTTCTTCG GCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTACCAC TGCCGGGAAGACACCGACAACATCTTCTTCACGTGCTGCATTCTCCACAA CATGCTCCACTCCTTCGACGGCATGAGCGTGTTCAAGGAGAACGTCGACT GGGCAGGCAGCGCTGGTCTGCACGACCCCAAGGACCACGCCCCAGACACG GACTTCACGTCGGTCGGGCCGAGGCCGGCAACCGACCCGGAGGAGTACTT GTTCAATCCGCAACATGCAAAGCTGAAGGGCCAGCTGATCGAGAGTTTTG CCTACCGCAAGAAAAACAATGACGTTGTCTGGCTCTCTAGGCCCAAGTAG AGTTGAGGTGATTTGGAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig144:119088..121705-

>mRNA_P-littoralis_Contig144.42.1 ID=mRNA_P-littoralis_Contig144.42.1|Name=mRNA_P-littoralis_Contig144.42.1|organism=Pylaiella littoralis U1_48|type=CDS|length=915bp|location=Sequence derived from alignment at P-littoralis_Contig144:119088..121705- (Pylaiella littoralis U1_48)
ATGAGCAAATCGATGGCGGCAGCAACGTTCCACAAGTTCTGCAAGAACTT
CGCGAAGGAGATGTTCGAGGAGCATATCTACCTTCCAACAGGAACGTACC
AAGACGAAGTGATGGACTGCTACCGTAAACTGGGTTTTACTGGAGCAATC
GGTTCTACCGACGTCACTCACGTCGGCTGGGGCATGTGTCCGTTCACCCT
TGGCCGTTCTTTCACGGGCAAGGAGGGGTTTCCAACCCTGGCGTTCGAGG
TTACCGTCGACCACGCGGGGCGCGCCATTGGCGTCACCCAAGGGTTCACC
GGTGCGACCAACGACAAGACGATCGTCCGCTACGACGCAGCCGTACAGAC
CATCAGGAACAACAAAGTGTACAAGGATCGAGAGTACAAGCTCAGGAAGG
CGGATGGCACGGAGTTCACCCGGAAAGGATGCTATTTGATCGTCGACAAC
GGCTATCACGAGTGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGA
CGTGGATGACGCGGCCTTCTCCAAGATGCTTGAGAGTGTGCGCAAGGATG
TGGAGTGTTTCTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTC
CGCCTGGCCTACCACTGCCGGGAAGACACCGACAACATCTTCTTCACGTG
CTGCATTCTCCACAACATGCTCCACTCCTTCGACGGCATGAGCGTGTTCA
AGGAGAACGTCGACTGGGCAGGCAGCGCTGGTCTGCACGACCCCAAGGAC
CACGCCCCAGACACGGACTTCACGTCGGTCGGGCCGAGGCCGGCAACCGA
CCCGGAGGAGTACTTGTTCAATCCGCAACATGCAAAGCTGAAGGGCCAGC
TGATCGAGAGTTTTGCCTACCGCAAGAAAAACAATGACGTTGTCTGGCTC
TCTAGGCCCAAGTAG
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