mRNA_P-littoralis_Contig144.3.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 754 bits (1947), Expect = 2.350e-252 Identity = 414/674 (61.42%), Postives = 491/674 (72.85%), Query Frame = 3
Query: 81 NMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKVIREKVETVKKNREDLGSLEGRCTYLTACVIVKCRQQPSSGVDVTPLVDCVEDARKVVERCGSRRHQVSNFMKASSDKGEIAGLNARVDRLTGDLGLAGIAVLNGKVDGMKAMLVSCTTQAVTGCYVLANLDIVMTSVPKPPPKVATVPKGTPALKSWHVKRRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTVAAEFVRSPQALETFADGIVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRCPVAADDGAAYIKERMVNGHGGKGLKCLVVADNVWDKEVVSKLLETGMSVLLSTRDEGLILRSSGKAVGVDYLSKTDAESVL-RTAELPPGVRLPDHAVDLIELCGRVAMDLAFVGRWSTVRGRHDQAAWSHAAQKIREEIVNVCGDSFSGNVADARKKRREAVLSAGFQDLAIGSDDERVPRLYLSLAVLPDGHAFTVKDAAVLLYDEMPSLEDETSVCVVVDVLERWSVVSLVEGKFNMHDAHSSFAREGLMDRGDVRRRAVKQWVKYISSLEALRAVDAYDLKSLWLAVERVGGDGWWKTRPYVKALGAMDESDPSLCRKTIEAVGDFQEVQKYWADEAERLLRRCLAIKESKLGPEDVAVAHTLYELGVCAREAGRPE 2099
++SD+AAEAAR+AL +GST+ D VS DLGEELPVIKPV KTLK IR VETVK NRE+L +LE RCTY+TAC +VKCR S VDV PL DCVE A+ ERC SRR +VS +KA SDK EIAGLN+ VDRLT DLGLAGIAVL GKVD MK L +D + S+P+ K+A VP G P KSWHV+RR M VL+AL G + L G SGSGKTTVAAE VRS + E F+DGIVWL VN+GAK+RLPSLMLQLARMVHE+IGGS+GR P A++D A YIK+R+ GH G+ LKCLVVADNVW+++VVSKL+ETGM VLLSTRDE ++ RS GKAV VD LS+ DAESVL R AELP RLPD AVDLI+LCGRVAMD+AFVGRWSTVRGRHD A+WS AA IR E+ V D + + + KRR+A+L GF+DLAIGSDDERV RLYLSLAV+PDGHAF++KDAAVLLYD PS EDE S VVDVLERWS++ +G + MHDAH+ FARE L+DRG VRR A+K+W +Y+SSL+ LR+ D Y LK LWLA+ER+GGDGW KTRPY KALG M ESD +L R T EAVG FQE Q+ + A RR L +++ +LG + V +T L + A G E
Sbjct: 4 DISDSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESE-VDVAPLKDCVEAAKNFAERC-SRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTL--------------DRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESD-ALLRTTAEAVGWFQEAQED-LEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIE 659
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 726 bits (1873), Expect = 9.780e-241 Identity = 398/685 (58.10%), Postives = 481/685 (70.22%), Query Frame = 3
Query: 75 ATNMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKVIREKVETVKKNREDLGSLEGRCTYLTACVIVKCRQQPSSGVDVTPLVDCVEDARKVVERCGSRRHQVSNFMKASSDKGEIAGLNARVDRLTGDLGLAGIAVLNGKV--DGMKAMLVSCTTQAVTGCY-------VLANLDIVMTSVPKPPPKVATVPKGTPALKSWHVKRRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTVAAEFVRSPQALETFADGIVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRCPVAADDGAAYIKERMVNGHGGKGLKCLVVADNVWDKEVVSKLLETGMSVLLSTRDEGLILRSSGKAVGVDYLSKTDAESVLR-TAELPPGVRLPDHAVDLIELCGRVAMDLAFVGRWSTVRGRHDQAAWSHAAQKIREEIVNVCGDSFSGNVADARKKRREAVLSAGFQDLAIGSDDERVPRLYLSLAVLPDGHAFTVKDAAVLLYDEMPSLEDETSVCVVVDVLERWSVVSLVEGKFNMHDAHSSFAREGLMDRGDVRRRAVKQWVKYISSLEALRAVDAYDLKSLWLAVERVGGDGWWKTRPYVKALGAMDESDPSLCRKTIEAVGDFQEVQKYWADEAERLLRRCLAIKESKLGPEDVAVAHTLYELGVCAREAGRPE 2099
A ++DA E A++A MGS DV+ F+ DLGEELP+++PVL+TL++IREKVETVK+N EDL L RCTY+TAC IVKCR + +DV PL DCV K VER +R ++S +KA DKG+I L R+ L GDL LAGIA L + D V+ Q G +LA + ++ +PKPP KVA VPKGTP KSWHV+RR V V +AL GGP L GL G SG+GKTT A+ V S ETF+DGIVWL VN+G + LP LMLQLA+MV EDIGGS+GR P +DDG AY+K+++ NGHGGKGLKCLVVADNVW+ +VVS+LLETGM +LLSTRDE L+ R++G+ VGVD LS+ +AESVLR AEL P RLPD A DLIELCGRVAMDLAFVGRWSTVRGR D+ AWS AA K+R E+ + S D+R RR A+L AGF+DLAIGSDDERV RLYLSLAVLPDGHAFTVKDAAVLLYD P EDE SV VV+ LERW+++ VE + MHDAHS+FARE LMDRGDVRR A+K+ V+ ISSLEALR+++ Y LK LW V+RVGGDGW TRPY KAL A+DES+ L R+TIEAV FQE Q+ W A R RR LA++E +LG + V +T + L CA E
Sbjct: 2 AAYVADATGEVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTE-LDVAPLEDCVNAVEKFVERY-RKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTG-ANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVE 683
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 724 bits (1869), Expect = 1.580e-240 Identity = 395/693 (57.00%), Postives = 489/693 (70.56%), Query Frame = 3
Query: 75 ATNMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPV-------IKPVLKTLKVIREKVETVKKNREDLGSLEGRCTYLTACVIVKCRQQPSSGVDVTPLVDCVEDARKVVERCGSRRHQVSNFMKASSDKGEIAGLNARVDRLTGDLGLAGIAVLNGKVDGMKAMLVSC-TTQAVTGCYVLANLDIVMTSVPKPPPKVATVPKGTPALKSWHVKRRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTVAAEFVRSPQALETFADGIVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRCPVAADDGAAYIKERMVNGHGGKGLKCLVVADNVWDKEVVSKLLETGMSVLLSTRDEGLILRSSGKAVGVDYLSKTDAESVLRTA-ELPPGVRLPDHAVDLIELCGRVAMDLAFVGRWSTVRGRHDQAAWSHAAQKIREEIVNVCGDSFSGNVADARKKRREAVLSAGFQDLAIGSDDERVPRLYLSLAVLPDGHAFTVKDAAVLLYDEMPSLEDETSVCVVVDVLERWSVVSLVEGKFNM---------HDAHSSFAREGLMDRGDVRRRAVKQWVKYISSLEALRAVDAYDLKSLWLAVERVGGDGWWKTRPYVKALGAMDESDPSLCRKTIEAVGDFQEVQKYWADEAERLLRRCLAIKESKLGPEDVAVAHTLYELGVCAREAGRPE 2099
A S AAAE ++ L MGS VD ++FM +LGE+LP ++PVLKTL IRE VE V+ N+E+L +L RC YLTACV+VK RQ S +D+TP+ +C+E A ++VERCG R +++ + ASSDK EIA + A + L DL LAG+A+L GK + AM+ T QA T +LAN + ++ + K P K+A +PK TP KSWHV+R VM V EALT GGP L GL G SGSGKTT A+E VRS + + F+DG+VWL+VN GAK+RLPSLMLQLA M+ E++GG R P +DDGAAYIKE+M GHGGKGLKCLVVADNVW+KEVV KLLETGM VLLSTRDE L++ S G+ VGVD +S+ +AESVLR A ELPP RLPD AVDLIELCGRVAMDLAFVGRWSTVRGR D+ AWS AA K+R E+ + G+ SG V + R RR+AVL AGF+DLA GSDDERV RLYLSLAVLPDG FTVKDAAVLLYD PS EDE S VV++LERWSV+ + G + M HDAHS FARE LMDRGDVRR A+ +W + ISSL+ LR+V +D++ LWL VE+VGGDGW TRPY AL M++SDP L + AV FQ ++ W +EA RR L + +K+GP ++V +L+ELG+ + AGR E
Sbjct: 2 AAKSSGAAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRG-KMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGG---RRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVV-AVAKFQRHEEDW-EEAIATCRRLLDMPVTKVGPYSLSVIRSLHELGLGYKHAGRLE 688
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 670 bits (1728), Expect = 1.340e-221 Identity = 374/661 (56.58%), Postives = 454/661 (68.68%), Query Frame = 3
Query: 129 GSTVVDVVSFMGDLGEELPVIKPVLKTLKVIREKVETVKKNREDLGSLEGRCTYLTACVIVKCRQQPSSGVDVTPLVDCVEDARKVVERCGSRRHQVSNFMKASSDKGEIAGLNARVDRLTGDLGLAGIAVLNGKVDGMKAMLVSCTT-QAVTGCYVLANLDIVMTSVPKPPPKVATVPKGTPALKSWHVKRRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTVAAEFVRSPQALETFADGIVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRCPVAADDGAAYIKERMVNGHGGKGLKCLVVADNVWDKEVVSKLLETGMSVLLSTRDEGLILRSSGKAV-GVDYLSKTDAESVLRTA-ELPPGVRLPDHAVDLIELCGRVAMDLAFVGRWSTVRGRHDQAAWSHAAQKIREEIVNVCGDSFSGNVADARKKRREAVLSAGFQDLAIGSDDERVPRLYLSLAVLPDGHAFTVKDAAVLLYDEMPSLEDETSVCVVVDVLERWSVVSLVEGKFNMHDAHSSFAREGLMDRGDVRRRAVKQWVKYISSLEALRAVD-AYDLKSLWLAVERVGGDGWWKTRPYVKALGAMDESDPSLCRKTIEAVGDFQEVQKYWADEAERLLRRCLAIKESKLGPEDVAVAHTLYELGVCAREAGRPE 2099
G+ DV++F+ + + LP+I+PVLKTLK + +L RCTY+T CVIV+CR+ SSG+ TPL++CV VERC SRR +S +KA+ DK EIAGL R++ L GDL LAGIA + GKV+ +KA+L T QA++ LAN DI+ V P +ATVP GTPA KSWHV+RR VM AV +AL G GGPRL GL G SGSGKTT AAE VRS + E F+DGIVWLSVN GA ERL +LM+ LAR+V EDIGGS+GR P DDGAAY ++RM +GHGGKGLKCLVVADNVW++ V+SKLLETGM VLLSTRDE L+ + G V GVD LS+ DA SVLR A EL P +RLPD AV+L+ELCGRVAMD+AFVGRWSTVRGR D+ AWS AA K+R +I S NV D R RR+AVL AGF+DLAIGSDDER+PRLYLSLAVLPDGHAFT KDA LLYD P EDE S ++ LERWS + G + MHDAHS FAR+ +MDRG VR+ AVK+W +SSL+ LR+ D + LK LWLAV R+GG+ W RPY AL MDES+P L K+++++G FQ+ Q W A RR LA+K +LG + TL L CA G E
Sbjct: 6 GTMASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKG-SSGLKATPLMECVNAVGAFVERC-SRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIER---SRVSDNVWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLL-KSLQSLGWFQDAQGDWQS-ASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAE 659
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 593 bits (1530), Expect = 3.280e-191 Identity = 350/700 (50.00%), Postives = 439/700 (62.71%), Query Frame = 3
Query: 75 ATNMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKVIREKVETVKKNREDLGSLEGRCTYLTACVIVKCRQQPSSGVDVTPLVDCVEDARKVVERCGSRRHQVSNFMKASSDKGEIAGLNARVDRLTGDLGLAGIAVLNGKVDGMKAMLVSCTT-QAVTGCYVLANLDIVMTSVPKPPPKVATVPKGTPALKSWHVKRRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTVAAEFVRSPQALETFADGIVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRCPVAADDGAAYIKERMVNGHGGKGLKCLVVADNVWDKEVVSKLLETGMSVLLSTRDEGLILRSSGKAVGVDYLSKTDAESVLR-TAELPPGVRLPDHAVDLIELCGRVAMDLAFVGRWSTVRGRHDQAAWSHAAQKIREEIVNVCGDSFSGNVADARKKRREAVLSAGFQDLAIGSDDERVPRLYLSLAVLPDGHAFTVKDAAVLLYDEMPSLEDETSVCVVVDVLERWSVVSLVEGKFNM---------HDAHSSFAREGLMDRGDVRRRAVKQWVKYISSLEALRAVDAYDLKSLWLAVERVGGDGWWKTRPYVKALGAMDESDP-----------SLCRKTIEAVGDFQEVQKYWA-----DEAERLLRRCLAIKESKLGPEDVAVAHTLYELGVCAREAGR 2093
A S AAAE ++AL MGS VD ++F+ DL E+LP +N+E+L +L RC +LT CVIVK RQ S +DV+P+ +C+E A ++VERCG R +++ + ASSDK +IA + A + L +L LAG+A+L GK ++A + QA T +LAN +I+ + K P K A +PK TP KSWHV+R V+ V E LT GGP L GL G SGSGKTT A+E VRS + +RLPSLMLQLA MV+E+IGG R P +DDG AYIKERM GHGG+GLKCL V DNVW+KEVV +LLE GM VLLSTRDE L+ G+ V V+ LS+ +AESVLR AELPP RLPD AVDLIELCGRVAMDLAF GR STVRGR D+ AWS AA K+R E+ + G V + R RR+AV+ AGF DLAIGSDDERV RLYLSLAVLPDG FTVKDAAVL+YD MPS EDE S VV++LERWS + + G + M HDAHS FARE LMDRGDV R A+ +W + ISS++ LRAV ++++ LWL E+VGGDGW TRPY AL +++SDP + ++ + E+ + +EAE +LR CL I + LG V VA TL +L C R AG+
Sbjct: 2 AAESSGAAAEVTKLALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRG-KMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEIGG---RRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTLLGFTHVTVAKTL-DLSGCVRAAGQ 658
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 566 bits (1459), Expect = 1.590e-185 Identity = 329/601 (54.74%), Postives = 396/601 (65.89%), Query Frame = 3
Query: 219 IREKVETVKKNREDLGSLEGRCTYLTACVIVKCRQ-QPSSGVDVTPLVDCVEDARKVVERCGSRRHQVSNFMKASSDKGEIAGLNARVDRLTGDLGLAGIAVLNGKVDGMKAMLVSCTTQAVTGCYVLANLDIVMTSVPKPPPKVATVPKGTPALKSWHVKRRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTVAAEFVRSPQALETFADGIVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRCPVAADDGA-AYIKERMVNGHGGKGLKCLVVADNVWDKEVVSKLLETGMSVLLSTRDEGLILRSSGKAVGVDYLSKTDAESVLRTA-ELPPGVRLPDHAVDLIELCGRVAMDLAFVGRWSTVRGRHDQAAWSHAAQKIREEIVNVCGDSFSGNVADARKKRREAVLSAGFQDLAIGSDDERVPRLYLSLAVLPDGHAFTVKDAAVLLYDEMPSLEDETSVCVVVDVLERWSVV-SLVEGKFNMHDAHSSFAREGLMDRGDVRRRAVKQWVKYISSLEALRAVDAYDLKSLWLAVERVGGDGWWKTRPYVKALGAMDESDPSLCRKTIEAVGDFQEVQKYWADEAERLLRRCLAI 2009
+RE VETV + R++L +LE RCTY+TAC+I K R P S +V+PL DCV +A K VER R M+ M+ QA +LAN +I++ +PKPP K A VP+GTP KSWHV+R V V+EALTG GPRL GL G SG+GKTT AAE VRS E+F+DGIVWL+VN GA +RLPSLMLQLARMV EDIGG +G P + A AYIK+RM NGHGGKGLKCL VADNVW+KEVVS LL+TGM+VLLSTR E L+ + G V +D LS DAESVLR+A ELPP VRLPD AVDLI+LCGRVAMDLAFVGRWSTVRGRHD+ AWS AA K+R EI + GD V AR RR+A+L AG +DLAIGSDDERV RLYLSLAVLPD V DAA+LLYD P+ EDE SV V+DVLERWSV+ S K+ MHD S FAR LMDRGDVRR A+++WV YISSL+ +R+ +A LK WL VE+VGG+GW +T P AL MD+ +P L +++I AV E + W ++A + R L +
Sbjct: 1 MRETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVERRKKRT--------------------------------------------MEQMV---QNQAAARKELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVERH-VTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDI---VDGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEP-LLQESIAAVAKAHEAHEDW-EKASTIWHRSLGV 548
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 565 bits (1455), Expect = 2.030e-180 Identity = 305/493 (61.87%), Postives = 354/493 (71.81%), Query Frame = 3
Query: 618 MTSVPKPPPKVATVPKGTPALKSWHVKRRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTVAAEFVRSPQALETFADGIVWLSVNQGAKERLPSLMLQLARMVHEDIGGSMGRCPVAADDGAAYIKERMVNGHGGKGLKCLVVADNVWDKEVVSKLLETGMSVLLSTRDEGLILRSSGKAVGVDYLSKTDAESVLR-TAELPPGVRLPDHAVDLIELCGRVAMDLAFVGRWSTVRGRHDQAAWSHAAQKIREEIVNVCGDSFSGNVADARKKRREAVLSAGFQDLAIGSDDERVPRLYLSLAVLPDGHAFTVKDAAVLLYDEMPSLEDETSVCVVVDVLERWSVVSLVEGKFNMHDAHSSFAREGLMDRGDVRRRAVKQWVKYISSLEALRAVDAYDLKSLWLAVERVGGDGWWKTRPYVKALGAMDESDPSLCRKTIEAVGDFQEVQKYWADEAERLLRRCLAIKESKLGPEDVAVAHTLYELGVCAREAGR 2093
M + K K+ VPKGTPA KSW+VKRR VM V E L GGPRL GL G SGSGKTTVA+E VRS + E F+DGI WLSVN GAKERL SLMLQLAR+V+EDIG S+GR P ++DD AAYI++RM G GGK LKCLVVADNVW+KEVVSKLLETGM VLLSTR+ L+ + G+ VGVD LS+ DA SVLR AELPP ++P AVDLIELCGRVAMDLAFVGRWSTVRGR D+ AWS A K+REE+ V S +A+ R RR+A+L AGF+DLAIGSDDERV RLYLSLAV PDGHAFTV+DAAVLLYD P EDE SV VVVD LERW+V+ +G + MHDAHS FARE LMD G VRR AVK+WV IS LE LR+ D Y LK LWLAVE VGGDGW K+R Y AL MD +L R+ I A+ QE + W + A RR L I++ +LG + V + L CA + G+
Sbjct: 23 MDQLSKTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDW-EGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQ 514
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 8.520e-141 Identity = 305/697 (43.76%), Postives = 394/697 (56.53%), Query Frame = 3
Query: 87 SDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKVIREKVETVKKNREDLGSLEGRCTYLTACVIVKCRQQPSSGVDVTPLVDCVEDARKVVERCGSRRHQVSNFMKASSDKGEIAGLNARVDRLTGDLGLAGIAVLNGKVDGMKAMLVSCTTQAVTGCYVLANLDIVMTSVPKPPPKVATVPKGTPALKSWHVKRRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTVAAEFV------------------RSPQALETFADGIVWLSVNQG--AKERLPSLMLQLARMVHEDIGGSMGRCPVAADDG--AAYIKERMVNGHGGKG--LKCLVVADNVWDKEVVSKLLETGMSVLLSTRDEGLILRSSGKAVGVDYLSKTDAESVLR-TAELPPGVRLPDHAVDLIELCGRVAMDLAFVGRWSTVRGRHDQAAWSHAAQKIREEIVNVCGDSFSGNV-ADARKKRREAVLSAGFQDLAIGSDDERVPRLYLSLAVLPDGHAFTVKDAAVLLYD----EMPSLEDETSVCVVVDVLERWSVVSLVEGKFNMHDAHSSFAREGLMDRGDVRRRAVKQWVKYISSLEALRAVDAYDLKSLWLAVERVGGDGWWKTRPYVKALGAMDESDPSLCRKTIEAVGDFQEVQKYWA---DEAERLLRRCLAIKESKLGPEDVAVAHTLYELGVCA 2078
S A EAARV L MGST D+V F +LG E+PV+ VLKTLK IR + E V+ N E L +LE RCTY+TACVIVK RQ SS ++V PL CV A + RC SRR KASSD E+ LN+RVD LTGDLGLAGIA L+ KVD +KAML Q + + SVP VA VP G P SWHV R +V+ AV E L+ G P++ GL G SGSGKTT AA V R + E F DG+VWL V +G + ER+P+LM QLA+ V ED+ S G P A+ G +A+I + V G G +CLVVAD+VW+ +++ +L TGM VL ++RD L+ R G V VD LSK +AE +LR AEL G LP A +IE C R+A L FVGRWSTV+G D+ W+ A I E+ + G++ + D +R A+L AGF DLA + P LYLSLAV+PDG AF K+AAV L+D E S VV LE+W+VV++ F MHDAHS FAR L DVR A+++W + S L+ +R++D +++ LW A E +GG+ W +RPY AL ++ +S P C +++AV +F + W D A RLLR + E V HTL L CA
Sbjct: 49 SGAPEEAARVFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARC-SRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQ-----------NTMPASVP-----VAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISD-FVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFN--PLLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGNLFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPE-CIPSLKAVVEFGINECAWEVTHDVALRLLR-----VQKDAAVEHAEVRHTLESLIHCA 719
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 381 bits (978), Expect = 9.340e-107 Identity = 254/669 (37.97%), Postives = 357/669 (53.36%), Query Frame = 3
Query: 165 DLGEELPVIKPVLKTLKVIREKVETVKKNREDLGSLEGRCTYLTACVIVKCRQQPSSGVDVTPLVDCVEDARKVVERCGSRRHQVSNFMKASSDKGEIAGLNARVDRLTGDLGLAGIAVLNGKVDGMKAMLVSCTTQAVTGCYVLANLDIVMTSVPKPPPKVATVPKGTPALKSWHVKRRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTVAAEFV--RSPQALETFADGIVWLSVNQ--GAKERLPSLMLQLARMVHEDIGGSMGRCPVAADDGAAYIKERMVNGHGGKGLKCLVVADNVWDKEVVSKLLETGMSVLLSTRDEGLILRSSGKAVGVDYLSKTDAESVLR-TAELPPGVRLPDHAVDLIELCGRVAMDLAFVGRWSTVRGRH----DQAAWSHAAQKIREEIVNVCGDSFSGNVADARKK--RREAVLSAGFQDLAIGSDDERVPRLYLSLAVLPDGHAFTVKDAAVLLYDEMPSLEDETSVCVVVDVLERWSVVSL-VEGKFNMHDAHSSFAREGLMDRGDVRRRAVKQWVKYISSLEALRAVDAYDLKSLWLAVERVGGDGWWKTRPYVKALGAMDESDPSLCRKTIEAVG-------------DFQEVQKYWADEAERLLRRCLAIKESKLGPEDVAVAHTLYELGVCAREAGRP 2096
++G PV+ P+ L + V+ +N+E+L L RC +T VI K + +S +DV PL +CV+ ++V ER R +++ + D +I L R++ + +GL+G+ K+D + A L +P PK+A VPK P KS+HV R V+ V + L G GGP +A L G SG+GKTT AA V R + F DG+VWL V + G +RLPSLM LA+ +HED+ P DDG +Y+++ + + L+CLVVAD+VW+ VV KL ETGM VLL+TR + + V +D L +AE VLR AELP G RL D ++ ++E+CGRVAMD AFVG W++VR + AW +++ +I +V G GN + + R AVL AGF+ IG +D LY+ LAV P+G F DAAVLL E+E + +LERW V+ K+ HDAH+ FAR+ LMDR D+R AV++W ++IS L+ V+ + L +W A+E VGG GWW RPY L M S+P+ T AVG + E+ K E L RR L I+E+ LGP+D+ VA TL ELG+C RE GRP
Sbjct: 32 EIGASAPVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRG-RLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARL-------------------------QPGPKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTG-DDGVSYVRKIVSQ----EKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEM--GEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFK--YIGREDPLAQELYVKLAVFPEGFLFGESDAAVLL-------ENEEVAKGPISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPATSYATSGAVGVVMNLYRGARKLGELAEIMK----RVEPLFRRALEIEEATLGPDDIQVAVTLQELGLCMRETGRP 654
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 357 bits (917), Expect = 1.720e-101 Identity = 257/710 (36.20%), Postives = 376/710 (52.96%), Query Frame = 3
Query: 66 RKTATNMSDAAAEAARVALTMGSTVVD-VVSFMGDLGEELPVIKPVLKTLKVIREKVETVKKNREDLGSLEGRCTYLTACVIVKCRQQPSSGVDVTPLVDCVEDARKVVERCGSRRHQVSNFMKASSDKGEIAGLNARVDRLTGDLGLAGIAVLNGKVDGMKAMLVSCTTQAVTGCYVLANLDIVMTSVPKPPPKVATVPKGTPALKSWHVKRRQVMGAVLEALTGGGGPRLAGLFGASGSGKTTVAAEFVRSPQA-------------------LET----FADGIVWLSVN--QGAKERLPSLMLQLARMVHEDIGGSMGRCPVAADDGAAYIKERMVNGHGGKGLKCLVVADNVWDKEVVSKLLETGMSVLLSTRDEGLILRSSGKAVGVDYLSKTDAESVLR-TAELPPGVRLPDHAVDLIE-LCGRVAMDLAFVGRWSTVRGRHDQAAWSHAAQKIREEIVNVCGDSFSGNVADARKKRREAVLSAGFQDLAIGSDDERVPRLYLSLAVLPDGHAFTVKDAAVLLYDEMPSLEDETSVCVV---VDVLERWSVVSL-VEGKFNMHDAHSSFAREGLMDRGDVRRRAVKQWVKYISSLEALRAVDAYDLKSLWLAVERVGGDGWWKTRPYVKALGAMDESDPSLCRKT--IEAVGDFQEVQKYWADEAERLLRRCLAIKESKLGPEDVAVAHTLYELGVCAREAGR 2093
R T DA A A STVV+ V + + ++G PV+ P+ L + V+ +N+E+LG L RC +T VI K + +S +DV+PL CV+ +V +R + ++ + D +I L AR++ + +GLAG+ + +++ ++ +LA L P+P PK+A VP G PA ++WH R V V + L+G P +A L G SG+GK+T AA+ VR+ + LE F+DG+V+L V +GA +RLP LM +LA+ +HED+ P A + G +Y+K+ M +CLVVAD+VW+ VV+KL ETGM VLL+TR ++ + G V VD L+ +AE VLR AELP G RL D A+ +++ +CG VAMD+AFVG WS VR D AW+ A KI + IV+V D+ N D++ KR +L AGF L + +LY+++AV PDG+AF V DAAVLL D P + V +++LERW+V+++ GK+ MHD H FAR+ + D+GDVR+ V++W IS L+ D Y L +W AVE VGGDGW+ RPY K L +M S C K+ ++ V + E ++ A E E L R L + G + L+ LG GR
Sbjct: 76 RSTMATRGDAVQSAQETARLGISTVVESVATGIIEIGAATPVVAPLCVALLKAKGIVDGASRNKEELGELCERCDLITVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGC-LARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLEDVR--------------QILARLQ------PRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILSGDE-PAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEKGESYVKKMMTR----TKKRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEPNEG--VDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVREDADGMN--DSQVKRL-GILRAGFDYLG-EEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSMG----SDCSKSHALDVVAELYEQEQKLA-EMETLTREVLEHADDDAGADSCVRMVALWYLGRSLSIQGR 748 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig144.3.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig144.3.6 >prot_P-littoralis_Contig144.3.6 ID=prot_P-littoralis_Contig144.3.6|Name=mRNA_P-littoralis_Contig144.3.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1067bp MSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKVIREKVback to top mRNA from alignment at P-littoralis_Contig144:30358..35144+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig144.3.6 ID=mRNA_P-littoralis_Contig144.3.6|Name=mRNA_P-littoralis_Contig144.3.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=4787bp|location=Sequence derived from alignment at P-littoralis_Contig144:30358..35144+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig144:30358..35144+ >mRNA_P-littoralis_Contig144.3.6 ID=mRNA_P-littoralis_Contig144.3.6|Name=mRNA_P-littoralis_Contig144.3.6|organism=Pylaiella littoralis U1_48|type=CDS|length=3201bp|location=Sequence derived from alignment at P-littoralis_Contig144:30358..35144+ (Pylaiella littoralis U1_48)back to top |