mRNA_P-littoralis_Contig1438.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Match: A0A2D8LGP4_9FLAO (OMP_b-brl domain-containing protein n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LGP4_9FLAO) HSP 1 Score: 337 bits (865), Expect = 4.460e-108 Identity = 220/437 (50.34%), Postives = 252/437 (57.67%), Query Frame = 3
Query: 21 SIILIL--AILLTSCGAYFNQPEAPQDARIAEKQT*PKH*KHFRCPKNP*WLGYTTLKIRLGNIKM*KTEAPLVRPLPRSYNHSY*SLRR*QVV*AHRT*K-FRELTK*TEYYTYHTRRISSLPK*TCQTIKSVAICGNFTRRRCDFVRF*HFDWWGRRAILWYRS----------FFTVQTRPYYSIPAGNLNVNWRSAQNR*CFKNHSVTRC*CRT---V*ICKLSAFA*SGNRIY-------KK*ACSNGGSGSNRKAVSILILEGLKDELWATENGPEKDQELIDAYDLETAVENATELYEREYQTQTFRNKVSGGMGIAFIDGDYTTNVIDFMGSLGYSYQLIPELGVGFQAQIFKLNATTDNIKWWLSESLQLTAFVYTILPNDKLSPFIYGGPGLLLFADDTEEEHLERWDAFLNFRLALDSNTGLPIVF 1262
+I+L L AILLTSCGAYFNQPEAPQDARIAEK K + F PK P +G K + G K + + + + ++ A K FR + + + R I T + + N +R + F G ++ Y S +F Y + + S K +V++ V + K F R+ K + KAVSILILEGLKD+LWATENGPEKDQELIDAYDLETAVENATELYEREYQTQTFRNKVSGGMGIAFIDGDYTTNVIDFMGSLGYSYQLIPELGVGFQAQIFKLNATTDNIKWWLSESLQL+ YTILPNDKLSPFIYGGPGLLLFADDTEEEHLERWDAF L + GL F
Sbjct: 6 TIVLFLSWAILLTSCGAYFNQPEAPQDARIAEKTDVTKTLEAFPLPKEPIVVGVYNFKDQTGQYKNVENGSTFSTAVTQGATTI--------LIKALEDSKWFRPIERENLGNLLNERNIIRT------TREEYRVSQNEPAKRLSPLLFAGILLEG--GVISYDSNILTGGVGARYFGTGASSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNF----QRLLEVETGFTKNEPAQMAVQEAIEKAVSILILEGLKDDLWATENGPEKDQELIDAYDLETAVENATELYEREYQTQTFRNKVSGGMGIAFIDGDYTTNVIDFMGSLGYSYQLIPELGVGFQAQIFKLNATTDNIKWWLSESLQLS---YTILPNDKLSPFIYGGPGLLLFADDTEEEHLERWDAFFK----LQAGAGLEYRF 415
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Match: A0A6G6GQ24_9FLAO (Outer membrane beta-barrel protein n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GQ24_9FLAO) HSP 1 Score: 302 bits (773), Expect = 2.820e-94 Identity = 157/183 (85.79%), Postives = 165/183 (90.16%), Query Frame = 1
Query: 250 GATTILIKALEDSKWFRPIERENLGNLLNERNIIRTTREEYRVSQNEPAKRLSPLLFAGILLEGGVISYDSNILTGGVGARYFGTGASSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQMAVQEAIEKRCLF*SLKG*KMNCGQQKTDPK 798
GATTILIKALEDS+WFRPIERENLGNLLNERNIIRTTR+EYR +QNEP KR+SPLLFAGILLEGGVISYDSNILTGGVGARYFG G SSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQ+AVQEAIEK L+G K K+ P+
Sbjct: 85 GATTILIKALEDSQWFRPIERENLGNLLNERNIIRTTRDEYRTTQNEPPKRISPLLFAGILLEGGVISYDSNILTGGVGARYFGAGTSSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQLAVQEAIEKAVEILILEGLKDKLWATKSGPE 267
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Match: A0A2D7VQ51_9FLAO (OMP_b-brl domain-containing protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D7VQ51_9FLAO) HSP 1 Score: 290 bits (742), Expect = 1.200e-89 Identity = 151/186 (81.18%), Postives = 162/186 (87.10%), Query Frame = 1
Query: 250 GATTILIKALEDSKWFRPIERENLGNLLNERNIIRTTREEYRVSQNEPAKRLSPLLFAGILLEGGVISYDSNILTGGVGARYFGTGASSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQMAVQEAIEKRCLF*SLKG*KMNCGQQKTDPKKTK 807
GATTILIKALEDSKWF PIERENLGNLLNERNIIRTTR+EYR + + P +RL+PLLFAGILLEGGV+SYDSNILTGGVGARYFG G SSQYRQDRITVYLRA+STSTGEVLKTVN SKTILSQGVDVGLF+YVNFQRLLEVETGFTKNEP+QMAVQEAIEK L+G K N P+K K
Sbjct: 85 GATTILIKALEDSKWFLPIERENLGNLLNERNIIRTTRDEYRNATDNPPQRLNPLLFAGILLEGGVVSYDSNILTGGVGARYFGVGGSSQYRQDRITVYLRAVSTSTGEVLKTVNASKTILSQGVDVGLFRYVNFQRLLEVETGFTKNEPSQMAVQEAIEKAVELLILEGIKDNLWGTLEGPEKDK 270
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Match: A0A2D9N7G0_9FLAO (OMP_b-brl domain-containing protein n=2 Tax=Altibacter TaxID=1535231 RepID=A0A2D9N7G0_9FLAO) HSP 1 Score: 285 bits (728), Expect = 1.280e-87 Identity = 148/186 (79.57%), Postives = 158/186 (84.95%), Query Frame = 1
Query: 250 GATTILIKALEDSKWFRPIERENLGNLLNERNIIRTTREEYRVSQNEPAKRLSPLLFAGILLEGGVISYDSNILTGGVGARYFGTGASSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQMAVQEAIEKRCLF*SLKG*KMNCGQQKTDPKKTK 807
GATTILIKALEDSKWF PIERENL NLLNERNIIRTTR+EYR + N+P +RL+PLLFAG+LLEGGVISYDSNILTGGVGARYFG G SSQYRQDRITVYLRA+STSTGEVLKTVNVSKTILSQ VDVGLF+YVNFQ+LLEVETGFTKNEP QMAVQEAIEK +G K K K K
Sbjct: 81 GATTILIKALEDSKWFTPIERENLSNLLNERNIIRTTRDEYRANPNDPPQRLNPLLFAGVLLEGGVISYDSNILTGGVGARYFGVGGSSQYRQDRITVYLRAVSTSTGEVLKTVNVSKTILSQAVDVGLFRYVNFQKLLEVETGFTKNEPTQMAVQEAIEKAVEVLIYEGIKDGLWSTKEGEAKDK 266
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Match: A0A7G8PR29_9FLAO (Curli production component CsgG n=1 Tax=Constantimarinum furrinae TaxID=2562285 RepID=A0A7G8PR29_9FLAO) HSP 1 Score: 285 bits (728), Expect = 1.520e-87 Identity = 144/160 (90.00%), Postives = 153/160 (95.62%), Query Frame = 1
Query: 250 GATTILIKALEDSKWFRPIERENLGNLLNERNIIRTTREEYRVSQNEPAKRLSPLLFAGILLEGGVISYDSNILTGGVGARYFGTGASSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQMAVQEAIE 729
GATTILIKALEDSKWFRPIERENL NLLNERNIIRTTR+EYR S ++P +RL+PLLFAGILLEGGVISYD+N++TGGVGARYFGTG SSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQ VDVG+FKYVNFQRLLEVETGFTKNEP QMAVQEAIE
Sbjct: 85 GATTILIKALEDSKWFRPIERENLNNLLNERNIIRTTRDEYRKSADDPVQRLNPLLFAGILLEGGVISYDTNLMTGGVGARYFGTGGSSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQSVDVGIFKYVNFQRLLEVETGFTKNEPTQMAVQEAIE 244
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Match: A0A6G6GPZ5_9FLAO (Outer membrane beta-barrel protein n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GPZ5_9FLAO) HSP 1 Score: 283 bits (725), Expect = 4.010e-87 Identity = 149/186 (80.11%), Postives = 159/186 (85.48%), Query Frame = 1
Query: 250 GATTILIKALEDSKWFRPIERENLGNLLNERNIIRTTREEYRVSQNEPAKRLSPLLFAGILLEGGVISYDSNILTGGVGARYFGTGASSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQMAVQEAIEKRCLF*SLKG*KMNCGQQKTDPKKTK 807
GATTILIKALEDSKWF PIERENL NLLNERNIIRTTR+EYR S + +RL PLLFAGILLEGGVISYDSNILTGGVGARYFG G SSQYRQDRITVYLRA+STS+GEVLKTVN SKTILSQGVDVGLF+YVNFQRLLEVETGFTKNEP+QMAVQEAIEK L+G K + P+K K
Sbjct: 85 GATTILIKALEDSKWFTPIERENLANLLNERNIIRTTRDEYRNSNDTAPQRLRPLLFAGILLEGGVISYDSNILTGGVGARYFGVGGSSQYRQDRITVYLRAVSTSSGEVLKTVNASKTILSQGVDVGLFRYVNFQRLLEVETGFTKNEPSQMAVQEAIEKAVELLILEGIKDGLWATEEGPEKDK 270
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Match: A0A7Y3MQB9_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7Y3MQB9_9FLAO) HSP 1 Score: 281 bits (719), Expect = 3.230e-86 Identity = 144/184 (78.26%), Postives = 160/184 (86.96%), Query Frame = 1
Query: 250 GATTILIKALEDSKWFRPIERENLGNLLNERNIIRTTREEYRVSQNEPAKRLSPLLFAGILLEGGVISYDSNILTGGVGARYFGTGASSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQMAVQEAIEKRCLF*SLKG*KMNCGQQKTDPKK 801
GATTILIKALEDSKWFRPIERENL NLLNERNIIRTTR+EYR + N +RL PLLFAG+LLEGGVISYDSNILTGG GARYFG GAS++YRQDRIT+YLRA+STSTGEVLKTVNVSKTILSQGVDVG+F++VNFQRLLEVETGFTKNEPAQ+AVQEAIEK ++G K + Q +K
Sbjct: 85 GATTILIKALEDSKWFRPIERENLSNLLNERNIIRTTRDEYRANPNATPQRLRPLLFAGMLLEGGVISYDSNILTGGAGARYFGAGASTEYRQDRITIYLRAVSTSTGEVLKTVNVSKTILSQGVDVGIFRFVNFQRLLEVETGFTKNEPAQLAVQEAIEKAVELLIIEGIKDDLWQSAEGEEK 268
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Match: A0A661Y2K5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661Y2K5_9BACT) HSP 1 Score: 278 bits (711), Expect = 4.180e-86 Identity = 139/186 (74.73%), Postives = 158/186 (84.95%), Query Frame = 1
Query: 250 GATTILIKALEDSKWFRPIERENLGNLLNERNIIRTTREEYRVSQNEPAKRLSPLLFAGILLEGGVISYDSNILTGGVGARYFGTGASSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQMAVQEAIEKRCLF*SLKG*KMNCGQQKTDPKKTK 807
GATTILIKALEDSKWFRPIERENL NL+NERNIIRTTR+EYR + +P +RL+PLLFA ILLEGG+ISYD+N+LTGG GARYFG G SSQYRQDRIT+YLRA+STSTGEVLKTVNVSKTILSQ VD+G+F++VNFQRLLEVETGFTKNEP Q+A+QEAIEK +G K K P+K K
Sbjct: 3 GATTILIKALEDSKWFRPIERENLANLMNERNIIRTTRDEYRSASGDPPQRLNPLLFANILLEGGIISYDTNVLTGGAGARYFGAGGSSQYRQDRITIYLRAVSTSTGEVLKTVNVSKTILSQAVDIGIFRFVNFQRLLEVETGFTKNEPTQLAIQEAIEKAVELLIYEGIKDKLWFSKEGPEKDK 188
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Match: A0A2D8LGQ9_9FLAO (OMP_b-brl domain-containing protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LGQ9_9FLAO) HSP 1 Score: 278 bits (711), Expect = 4.490e-85 Identity = 146/186 (78.49%), Postives = 159/186 (85.48%), Query Frame = 1
Query: 250 GATTILIKALEDSKWFRPIERENLGNLLNERNIIRTTREEYRVSQNEPAKRLSPLLFAGILLEGGVISYDSNILTGGVGARYFGTGASSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQMAVQEAIEKRCLF*SLKG*KMNCGQQKTDPKKTK 807
GATTILIKALE+S+WFRPIERENLGNLLNERNIIRTTR EY N +RL+PLLFAGI+LEGG+ISYD+NILTGGVGARYFG GASSQYRQDRITVYLRA+STSTGEVLKTVN SKTILSQGVDVGLF++VNFQRLLEVETGFTKNEP+QMAVQEAIEK L+G K P+K K
Sbjct: 85 GATTILIKALEESRWFRPIERENLGNLLNERNIIRTTRNEY----NSKPERLTPLLFAGIILEGGIISYDTNILTGGVGARYFGAGASSQYRQDRITVYLRAVSTSTGEVLKTVNASKTILSQGVDVGLFRFVNFQRLLEVETGFTKNEPSQMAVQEAIEKAVELLILEGVKDKLWGTSEGPEKDK 266
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Match: A0A2E5B0F2_9FLAO (Uncharacterized protein n=2 Tax=Aequorivita sp. TaxID=1872390 RepID=A0A2E5B0F2_9FLAO) HSP 1 Score: 278 bits (711), Expect = 4.890e-85 Identity = 143/186 (76.88%), Postives = 159/186 (85.48%), Query Frame = 1
Query: 250 GATTILIKALEDSKWFRPIERENLGNLLNERNIIRTTREEYRVSQNEPAKRLSPLLFAGILLEGGVISYDSNILTGGVGARYFGTGASSQYRQDRITVYLRAISTSTGEVLKTVNVSKTILSQGVDVGLFKYVNFQRLLEVETGFTKNEPAQMAVQEAIEKRCLF*SLKG*KMNCGQQKTDPKKTK 807
GATTILIKALEDSKWFRPIEREN+ NLLNERNIIR+TREEYR + ++ RL+PLLFAG+LLEGG++SYDSNILTGG GARYFGTGAS+QYRQDRITVYLRA+ST+TGEVLKTV VSKTILSQ VDV LFKYVNFQRLLEVETGFTKNEPAQMAVQEAIEK ++G K + +K K
Sbjct: 85 GATTILIKALEDSKWFRPIERENISNLLNERNIIRSTREEYRKADDQTPTRLTPLLFAGVLLEGGIVSYDSNILTGGAGARYFGTGASTQYRQDRITVYLRAVSTNTGEVLKTVYVSKTILSQAVDVSLFKYVNFQRLLEVETGFTKNEPAQMAVQEAIEKSVEMLIVEGIKDRLWSTRDGEEKNK 270 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1438.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1438.7.1 >prot_P-littoralis_Contig1438.7.1 ID=prot_P-littoralis_Contig1438.7.1|Name=mRNA_P-littoralis_Contig1438.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=133bp MGIAFIDGDYTTNVIDFMGSLGYSYQLIPELGVGFQAQIFKLNATTDNIKback to top mRNA from alignment at P-littoralis_Contig1438:14793..16206+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1438.7.1 ID=mRNA_P-littoralis_Contig1438.7.1|Name=mRNA_P-littoralis_Contig1438.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1414bp|location=Sequence derived from alignment at P-littoralis_Contig1438:14793..16206+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1438:14793..16206+ >mRNA_P-littoralis_Contig1438.7.1 ID=mRNA_P-littoralis_Contig1438.7.1|Name=mRNA_P-littoralis_Contig1438.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=399bp|location=Sequence derived from alignment at P-littoralis_Contig1438:14793..16206+ (Pylaiella littoralis U1_48)back to top |