mRNA_P-littoralis_Contig1436.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 449 bits (1156), Expect = 1.040e-155 Identity = 213/254 (83.86%), Postives = 225/254 (88.58%), Query Frame = 1
Query: 1 VMACLTILARGNCFGSIYMFSWMSSAVVQKTFHKFCKHFATGMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGPTDVTHIALGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVERGRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPPKYPLSVGDLLFSKWLESVRKDVECFFGILKIRFRILKLAMTYQEQERIVYVFFTCCILHNMLHTFDGM 762
V+ACLTIL RGN FGSIY SWMS+ VQK FH+FC+HFAT MYDEHIFLP++ENGELDRVMGQYEKLGFPGAMG TDVTHI RCPYNQ RSYTGKEGKPT+GYQVTVNHAGRVLAVTEGFTGSTNDKTIIC D AV+R R DKQY EK F V+ KDGTT TLKGCYLIVDNGYHKWR LIEP KYPLS DLLFSK LESVRKDVECFFGILK+RFRILKLAMTYQ+QER+ YVFFTCCILHNMLHT DGM
Sbjct: 128 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 381
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 418 bits (1075), Expect = 2.320e-144 Identity = 195/255 (76.47%), Postives = 214/255 (83.92%), Query Frame = 1
Query: 1 VMACLTILARGNCFGSIYMFSWMSSAVVQKTFHKFCKHFATGMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGPTDVTHIALGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVERGRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPPKYPLSVGDLLFSKWLESVRKDVECFFGILKIRFRILKLAMTYQEQERIVYVFFTCCILHNMLHTFDGMD 765
V+A LTIL RGNCF SIY SWMS+ VQ FHKFCKHFA MYDEHI+LP+++NGELD VM QY++LGF GAMG DVTHI +CPYN ARSYTGKEG PT+GYQVTVNHAGR +AVTEGFT STNDKT +CWDA VE+ R D QYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+EP KYPLS D+LFSK LESVRKDVECFFGILK FRI K+AM Y EQERI VFFTCCILHNMLHTFDGMD
Sbjct: 99 VLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMD 353
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 401 bits (1031), Expect = 5.610e-137 Identity = 199/283 (70.32%), Postives = 215/283 (75.97%), Query Frame = 1
Query: 1 VMACLTILARGNCFGSIYMFSWMSSAVVQKTFHKFCKHFATGMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGPTDVTHIALGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVERGRKDKQYT----------------------------EKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPPKYPLSVGDLLFSKWLESVRKDVECFFGILKIRFRILKLAMTYQEQERIVYVFFTCCILHNMLHTFDGMD 765
V+A LTIL RGNCF SIY SWMS+ VQ FHKFC+HFA MYDE I LPT+E+G+LD VM QY++LGF GA+G DVTHIA RCPYNQARSYTGKEG PTI YQVTV+HAGR +AVTEGFTGSTNDKTI+CWD AVE+ DK YT EKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ LIEP KYPLS DLLFSK LESVRKDVECFFGILK RFRILKLAM YQ QERI VFFTC ILHNMLHTFDGMD
Sbjct: 86 VLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMD 368
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 373 bits (958), Expect = 1.680e-127 Identity = 181/255 (70.98%), Postives = 201/255 (78.82%), Query Frame = 1
Query: 1 VMACLTILARGNCFGSIYMFSWMSSAVVQKTFHKFCKHFATGMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGPTDVTHIALGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVERGRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPPKYPLSVGDLLFSKWLESVRKDVECFFGILKIRFRILKLAMTYQEQERIVYVFFTCCILHNMLHTFDGMD 765
V+A LTIL +GNCF SI+ SWMS+ VQ FHKFC+ FA MYDEHI LP +E+G+L VM QY++LG CPYNQARSYTGK+ PTI YQVTV+HA R +AVTEGFTGSTNDKTI+CWDAAV++ R DKQYTEKTFD+YN+DGTT TLKGCY + DNGYHKW+ LIEP KYPLS DLLFSK LESVRKDVECFFGILK RFRILKLAM YQ QERI VFFTCCILHNMLHTFDGMD
Sbjct: 21 VLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMD 258
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 365 bits (937), Expect = 7.280e-125 Identity = 172/213 (80.75%), Postives = 187/213 (87.79%), Query Frame = 1
Query: 127 MYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGPTDVTHIALGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVERGRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPPKYPLSVGDLLFSKWLESVRKDVECFFGILKIRFRILKLAMTYQEQERIVYVFFTCCILHNMLHTFDGMD 765
MYDEHI LPT+E+G+LD V+ QY++LGF GAMG DVTHIA RCPYNQARSYTGKEG PTIGYQVTV+HAGR +AVTEGFTGSTNDKT +CWDAAVE+ R DKQYTEKTFDVYN+DGTT TLKGCY++VDNGYHKW+ LIEP KYPLS DLLFSK LESVRKDVECFFGILK R RIL LAM +Q QERI VFFTCCILHNMLHTFDGMD
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMD 213
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 344 bits (882), Expect = 7.740e-115 Identity = 165/256 (64.45%), Postives = 199/256 (77.73%), Query Frame = 1
Query: 1 VMACLTILARGNCFGSIYMFSWMSSAVVQKTFHKFCKHFATGMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGPTDVTHIALGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVERGRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPPKYPLSVGDLLFSKWLESVRKDVECFFGILKIRFRILKLAMTYQEQERIVYVFFTCCILHNMLHTFDGMDD 768
V+ACL IL+RGN F IY S++S V TFH+FCK+FA +YDE+++LPT E +L +VM QY+++GFPGA+G TDVTHI G CPYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV R R D YTE+ + +Y +DG KGCYL+VDNGYHKWRTLI P K P+ GDL+FSK LES RKDVEC+FGILK RFRI KLA+ + +QE I VFFTCCILHNMLH+FD D
Sbjct: 84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGD 337
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 344 bits (882), Expect = 1.330e-113 Identity = 165/256 (64.45%), Postives = 199/256 (77.73%), Query Frame = 1
Query: 1 VMACLTILARGNCFGSIYMFSWMSSAVVQKTFHKFCKHFATGMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGPTDVTHIALGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVERGRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPPKYPLSVGDLLFSKWLESVRKDVECFFGILKIRFRILKLAMTYQEQERIVYVFFTCCILHNMLHTFDGMDD 768
V+ACL IL+RGN F IY S++S V TFH+FCK+FA +YDE+++LPT E +L +VM QY+++GFPGA+G TDVTHI G CPYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV R R D YTE+ + +Y +DG KGCYL+VDNGYHKWRTLI P K P+ GDL+FSK LES RKDVEC+FGILK RFRI KLA+ + +QE I VFFTCCILHNMLH+FD D
Sbjct: 175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGD 428
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 341 bits (875), Expect = 9.630e-113 Identity = 167/256 (65.23%), Postives = 194/256 (75.78%), Query Frame = 1
Query: 1 VMACLTILARGNCFGSIYMFSWMSSAVVQKTFHKFCKHFATGMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGPTDVTHIALGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVERGRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPPKYPLSVGDLLFSKWLESVRKDVECFFGILKIRFRILKLAMTYQEQERIVYVFFTCCILHNMLHTFDGMDD 768
V+ACL ILARGNCF IY S++S TFH+F ++FA MY EHIFLPT + + +VM QY++LGF GA G TDVTHI G CPYNQARSYTGKEG PT+ YQVTV+H RVLAVT GFTGSTNDK+II +D AV + R+D Y+EK F VY DGT LKGCYL+VDNGYHKW TLI P KYP+ DL FSK LESVRKDVECFFGI+K RFRILKL++ Y +QE I VFFTCCILHNMLH++D +
Sbjct: 159 VLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSE 412
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 308 bits (790), Expect = 6.550e-101 Identity = 141/189 (74.60%), Postives = 157/189 (83.07%), Query Frame = 1
Query: 1 VMACLTILARGNCFGSIYMFSWMSSAVVQKTFHKFCKHFATGMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGPTDVTHIALGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVERGRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPPKYP 567
V+A LTIL RGNCF SIY SWMS+A VQ FH FCKHFA MYDEHI+LP+++NGELD VM QY++LGF GAMG DVTHI +CPYN RSYTGKEG PTIGYQVTVNHAGR AVTEGFTGSTNDKTI+CWDAAVE+ R DKQYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+ + P
Sbjct: 126 VLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVP 314
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE) HSP 1 Score: 301 bits (771), Expect = 2.410e-97 Identity = 157/255 (61.57%), Postives = 173/255 (67.84%), Query Frame = 1
Query: 1 VMACLTILARGNCFGSIYMFSWMSSAVVQKTFHKFCKHFATGMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGPTDVTHIALGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVERGRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPPKYPLSVGDLLFSKWLESVRKDVECFFGILKIRFRILKLAMTYQEQERIVYVFFTCCILHNMLHTFDGMD 765
V+A LTIL R NCF SI+ SWMS+ VQ FHKFC+HFA MYDEHI L +E+G+LD V+ G CPYNQARSYTGKEG PTI YQV TI+CWDAAVE+ R DKQYTEKTFDVYN+DGTT TLKG YL+VDNGYHKW+ LIEP KYPLS DLLFSK L+SVR+D GILK RFRILKLAM YQ QERI VFFTCCI+HNMLHTFDGMD
Sbjct: 173 VLAWLTILGRNNCFASIFQVSWMSAKTVQGMFHKFCRHFARDMYDEHIHLLAEESGKLDHVVRSGWVYG-----------------CPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMD 389 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1436.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1436.3.1 >prot_P-littoralis_Contig1436.3.1 ID=prot_P-littoralis_Contig1436.3.1|Name=mRNA_P-littoralis_Contig1436.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=255bp MACLTILARGNCFGSIYMFSWMSSAVVQKTFHKFCKHFATGMYDEHIFLPback to top mRNA from alignment at P-littoralis_Contig1436:13152..14239+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1436.3.1 ID=mRNA_P-littoralis_Contig1436.3.1|Name=mRNA_P-littoralis_Contig1436.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1088bp|location=Sequence derived from alignment at P-littoralis_Contig1436:13152..14239+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1436:13152..14239+ >mRNA_P-littoralis_Contig1436.3.1 ID=mRNA_P-littoralis_Contig1436.3.1|Name=mRNA_P-littoralis_Contig1436.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=765bp|location=Sequence derived from alignment at P-littoralis_Contig1436:13152..14239+ (Pylaiella littoralis U1_48)back to top |