mRNA_P-littoralis_Contig1435.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 305 bits (780), Expect = 8.480e-96 Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 1
Query: 13 MEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSM 465
MEHSREAGKVADVDSRTVRRWVKEFCKG SFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMS+
Sbjct: 1 MEHSREAGKVADVDSRTVRRWVKEFCKGDSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSI 151
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 276 bits (707), Expect = 5.330e-85 Identity = 135/155 (87.10%), Postives = 143/155 (92.26%), Query Frame = 1
Query: 1 GVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSM 465
GV KM HSRE G+V++VD TVRRWVKEFC GGSFVVRKRQYNKRE HSYIDDED+R RLREYIDRRLYRRKK+EPRLRIADVQKWI+EDLLKEELAGTRG+S RTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFV LLKRL Q MS+
Sbjct: 41 GVTKMAHSREVGEVSEVDPTTVRRWVKEFCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKNEPRLRIADVQKWIHEDLLKEELAGTRGVSWRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVALLKRLRQKMSI 195
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Match: A0A6H5JH07_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH07_9PHAE) HSP 1 Score: 268 bits (685), Expect = 2.260e-82 Identity = 130/146 (89.04%), Postives = 137/146 (93.84%), Query Frame = 1
Query: 28 EAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSM 465
E G+V++VD TVRRWVKEFC GGSFVVRKRQYNKRE HSYIDDED+R RLREYIDRRLYRRKKDEPRLRIADVQKWI+EDLLKEELAGTRG+SRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFV LLKRL Q MS+
Sbjct: 367 EVGEVSEVDPTTVRRWVKEFCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKDEPRLRIADVQKWIHEDLLKEELAGTRGVSRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVALLKRLRQKMSI 512
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Match: A0A6H5KM05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM05_9PHAE) HSP 1 Score: 253 bits (646), Expect = 1.610e-80 Identity = 120/146 (82.19%), Postives = 133/146 (91.10%), Query Frame = 1
Query: 1 GVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELL 438
GVAKM+HSR A +VA V+S+ VRRWVKEFCKGG+FVV KRQYNKREPHS+I+DED R LR YIDR+LYRRKKDEPRLRIADVQKWINE+LLK+ELAGT+G+SRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPD+V DRR FV L
Sbjct: 283 GVAKMDHSRAAAEVAKVESKAVRRWVKEFCKGGAFVVPKRQYNKREPHSFIEDEDKRNHLRGYIDRKLYRRKKDEPRLRIADVQKWINEELLKDELAGTKGVSRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDIVNDRRGFVAYL 428
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Match: D7FZS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS4_ECTSI) HSP 1 Score: 236 bits (602), Expect = 1.670e-76 Identity = 117/139 (84.17%), Postives = 122/139 (87.77%), Query Frame = 1
Query: 1 GVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDR 417
GVAKMEHSRE KV +VD TVRRWVK+ CKGGS V+RKRQYNKRE H YIDDEDIR LREYIDRRLYRRK+DEPRLRIADVQKWIN+DLLKEELAGTRG SRRTVHKWMQKL FRWSRH K V VDGHNRPDVVT R
Sbjct: 81 GVAKMEHSREVAKVYEVDPSTVRRWVKKLCKGGSVVIRKRQYNKREAHPYIDDEDIRNGLREYIDRRLYRRKRDEPRLRIADVQKWINDDLLKEELAGTRGFSRRTVHKWMQKLDFRWSRHRKWVDVDGHNRPDVVTPR 219
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 188 bits (478), Expect = 1.400e-52 Identity = 91/155 (58.71%), Postives = 111/155 (71.61%), Query Frame = 1
Query: 1 GVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSM 465
GV K+ HSR GK V +RTVR WV +FCK G+FVV R+Y KR+P YIDDEDIR + REY+D R+YRRKK +PR R+AD Q+W+N LKEE AG GI R T H W+ +LGFRW RH KCVYVDGHNRPDVV RR + E + + + MS+
Sbjct: 19 GVKKLAHSRAVGKAVGVHARTVRNWVTDFCKDGNFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQRWVNTVCLKEEFAGGGGICRSTAHVWIAQLGFRWRRHGKCVYVDGHNRPDVVQARRLYTEKMFVMRRLMSI 173
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Match: A0A6H5K527_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K527_9PHAE) HSP 1 Score: 187 bits (475), Expect = 4.300e-52 Identity = 90/155 (58.06%), Postives = 111/155 (71.61%), Query Frame = 1
Query: 1 GVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSM 465
GV K+ HSR G+ V +RTVR+WV +FCK G FVV R+Y KR+P YIDDEDIR + REY+D R+YRRKK +PR R+AD Q+W+N LKEE AG GI R T H W+ +LGFRW RH KCVYVDGHNRPDVV RR + E + + + MS+
Sbjct: 473 GVKKLAHSRAVGEAVGVHARTVRKWVTDFCKDGKFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQRWVNTVCLKEEFAGGGGICRSTAHVWIAQLGFRWRRHGKCVYVDGHNRPDVVQARRLYTEKMFVMRRLMSI 627
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Match: A0A6H5J7G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7G3_9PHAE) HSP 1 Score: 177 bits (448), Expect = 2.500e-49 Identity = 88/155 (56.77%), Postives = 108/155 (69.68%), Query Frame = 1
Query: 1 GVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSM 465
GV KM HSR G V ++TVR+WVKEFC+ G F++RKR Y + S+ID EDI R RE IDRRLYRRKK +PR R++D Q+W+N LLKE +G GISR T H W+ +LGFRW + KCVYVDGHNRPDVV RR +V + L + MSM
Sbjct: 494 GVNKMRHSRYVGDVVKTTAQTVRKWVKEFCQDGKFLIRKRLYEISQADSFIDHEDIAERCREEIDRRLYRRKKTDPRFRVSDFQRWVNTVLLKEVFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDVVEARREYVAKMLILRKMMSM 648
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Match: A0A6H5L7Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Z5_9PHAE) HSP 1 Score: 165 bits (418), Expect = 2.910e-49 Identity = 85/155 (54.84%), Postives = 105/155 (67.74%), Query Frame = 1
Query: 1 GVAKMEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSM 465
GV KM HSR G V ++TVR+WVKEFC+ G F++ KR Y R+ S+ID EDI R RE IDRRLYRRKK +P R++D Q+W+N LLKE +G GISR T H W+ +LGFRW + KCVYVDGHNRPDV R +V + L + MSM
Sbjct: 28 GVNKMRHSRYVGDVVKTTAQTVRKWVKEFCQDGKFLISKRLYEIRQADSFIDPEDIAERCREEIDRRLYRRKKTDPWFRVSDFQRWVNTVLLKEVFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDVEA-RPEYVAKMLILRKMMSM 181
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Match: A0A6H5L796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L796_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.650e-48 Identity = 83/151 (54.97%), Postives = 105/151 (69.54%), Query Frame = 1
Query: 13 MEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSM 465
M HSR G V ++TVR+WVKEFC+ G F++RKR Y + S+ID EDI R RE IDRRLYRRKK +PR R++D Q+W+N LLKE +G GISR T H W+ +LGFRW + KCVYVDGHNRPDVV R+ +V + L + MS+
Sbjct: 1 MRHSRYVGDVVKTTAQTVRKWVKEFCQDGKFLIRKRLYEISQADSFIDHEDIAERCREEIDRRLYRRKKTDPRFRVSDFQRWVNTVLLKEVFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDVVEARQEYVAKMLILRKMMSI 151 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1435.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1435.7.1 >prot_P-littoralis_Contig1435.7.1 ID=prot_P-littoralis_Contig1435.7.1|Name=mRNA_P-littoralis_Contig1435.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=152bp MEHSREAGKVADVDSRTVRRWVKEFCKGGSFVVRKRQYNKREPHSYIDDEback to top mRNA from alignment at P-littoralis_Contig1435:12392..13203+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1435.7.1 ID=mRNA_P-littoralis_Contig1435.7.1|Name=mRNA_P-littoralis_Contig1435.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=812bp|location=Sequence derived from alignment at P-littoralis_Contig1435:12392..13203+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1435:12392..13203+ >mRNA_P-littoralis_Contig1435.7.1 ID=mRNA_P-littoralis_Contig1435.7.1|Name=mRNA_P-littoralis_Contig1435.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=456bp|location=Sequence derived from alignment at P-littoralis_Contig1435:12392..13203+ (Pylaiella littoralis U1_48)back to top |