mRNA_P-littoralis_Contig143.31.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Match: D8LC00_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC00_ECTSI) HSP 1 Score: 162 bits (410), Expect = 4.590e-50 Identity = 77/98 (78.57%), Postives = 89/98 (90.82%), Query Frame = 1
Query: 1 SIKELVGKHGVVVYSKSYCPFCTKAKNALTAIGAKFEVVELDKMSNGGAIQDALQSITGQRSVPNVFIGGETIGGGDDTVRLHKSGELLTKVTAAGAV 294
++ E+VG+HGVVVYSK+YCPFCTKAK AL +GAK+E++ELD++ NG AIQDALQSITGQRSVPNVFIGG +IGGGDDTVRL KSGELLTKVTA GAV
Sbjct: 7 AVNEMVGQHGVVVYSKTYCPFCTKAKKALKDVGAKYELIELDEVDNGSAIQDALQSITGQRSVPNVFIGGTSIGGGDDTVRLQKSGELLTKVTAVGAV 104
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Match: A0A7S1B3V4_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3V4_9STRA) HSP 1 Score: 119 bits (297), Expect = 9.060e-33 Identity = 57/98 (58.16%), Postives = 78/98 (79.59%), Query Frame = 1
Query: 4 IKELVGKHGVVVYSKSYCPFCTKAKNALTAIGA-KFEVVELDKMSNGGAIQDALQSITGQRSVPNVFIGGETIGGGDDTVRLHKSGELLTKVTAAGAV 294
I++ +G + VVV+SK+YCPFCTKAK +L +G F+ VELD+M++G +IQ L S+TGQR+VPNVFIGG++IGGGDDT L +SG+L T + AAGA+
Sbjct: 13 IQDTIGSNKVVVFSKTYCPFCTKAKRSLANVGCTNFKSVELDQMADGSSIQSGLLSLTGQRTVPNVFIGGKSIGGGDDTAALEQSGKLKTMLQAAGAL 110
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Match: A0A836CIL9_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIL9_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.400e-32 Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 4 IKELVGKHGVVVYSKSYCPFCTKAKNALTAIGAKFEVVELDKMSNGGAIQDALQSITGQRSVPNVFIGGETIGGGDDTVRLHKSGELLTKVTAAGAV 294
IK V VV+YSKSYCP+C KAK AL AI A FE +ELD++SNG IQ AL+ +TG +VP VF+GG+ IGGGDDT R ++GEL+ VTAAG +
Sbjct: 5 IKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL 101
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Match: V4NKN5_EUTSA (Glutaredoxin domain-containing protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4NKN5_EUTSA) HSP 1 Score: 117 bits (293), Expect = 3.470e-32 Identity = 58/96 (60.42%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 7 KELVGKHGVVVYSKSYCPFCTKAKNALTAIGAKFEVVELDKMSNGGAIQDALQSITGQRSVPNVFIGGETIGGGDDTVRLHKSGELLTKVTAAGAV 294
KE+V + VVV+SKSYCPFC K K L +GAKF VELDK S+GG+IQ AL TGQR+VPNVFIGG+ IGG D T+ +H SG+L+ +T AGA+
Sbjct: 7 KEIVSSNAVVVFSKSYCPFCVKVKELLQKLGAKFIAVELDKESDGGSIQAALGEWTGQRTVPNVFIGGKHIGGCDATMGMHSSGKLVPLLTEAGAI 102
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Match: A0A6D2L6S0_9BRAS (Glutaredoxin domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2L6S0_9BRAS) HSP 1 Score: 116 bits (291), Expect = 8.340e-32 Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 7 KELVGKHGVVVYSKSYCPFCTKAKNALTAIGAKFEVVELDKMSNGGAIQDALQSITGQRSVPNVFIGGETIGGGDDTVRLHKSGELLTKVTAAGAV 294
K+LV + VVV+SKS+CP+C + K+ L +GAKF VELDK S+G IQ AL TGQR+VPNVFIGG+ IGG D T LHK+G+L+T +T AGA+
Sbjct: 7 KDLVSNNAVVVFSKSFCPYCVRVKDLLKQLGAKFIAVELDKESDGSKIQSALAEWTGQRTVPNVFIGGKHIGGCDSTTNLHKNGKLVTLLTEAGAI 102
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Match: A0A6P3ZZT2_ZIZJJ (glutaredoxin-like n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZZT2_ZIZJJ) HSP 1 Score: 115 bits (289), Expect = 1.370e-31 Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 7 KELVGKHGVVVYSKSYCPFCTKAKNALTAIGAKFEVVELDKMSNGGAIQDALQSITGQRSVPNVFIGGETIGGGDDTVRLHKSGELLTKVTAAGAV 294
KE+V + VVV+SK+YCP+C K T +GA F+V+ELD S+G IQ AL ITGQR+VPNVFIGG IGG D+T LHK G+L+T +T AGAV
Sbjct: 7 KEIVSSNPVVVFSKTYCPYCVTVKQLFTQLGATFKVIELDTESDGSEIQSALAEITGQRTVPNVFIGGNHIGGCDNTKALHKDGKLITLLTEAGAV 102
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Match: H3G9V5_PHYRM (Glutaredoxin domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=H3G9V5_PHYRM) HSP 1 Score: 115 bits (287), Expect = 2.530e-31 Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 1 SIKELVGKHGVVVYSKSYCPFCTKAKNALTAIGAKFEVVELDKMSNGGAIQDALQSITGQRSVPNVFIGGETIGGGDDTVRLHKSGELLTKVTAAGAV 294
+++ + VVVYSKSYCP+CTK K LT +GAKFEVVELD+++ G QDAL+ +TGQ +VPNVF+GG++IGG D +LHKSG+L + +GA+
Sbjct: 7 TVEAQIAASPVVVYSKSYCPYCTKTKTLLTELGAKFEVVELDQINGGSEQQDALEDLTGQSTVPNVFVGGQSIGGNSDVRKLHKSGDLEPLLKHSGAL 104
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Match: A0A7S0Q1V6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q1V6_9EUKA) HSP 1 Score: 115 bits (288), Expect = 2.530e-31 Identity = 54/97 (55.67%), Postives = 74/97 (76.29%), Query Frame = 1
Query: 4 IKELVGKHGVVVYSKSYCPFCTKAKNALTAIGAKFEVVELDKMSNGGAIQDALQSITGQRSVPNVFIGGETIGGGDDTVRLHKSGELLTKVTAAGAV 294
+++LV +H V+V+SKSYCP+C AK LT GAKF +ELDK +G AIQ+AL +TGQ++VPNVF+GG++IGGG +T L +SGEL K+ AA A+
Sbjct: 20 VEKLVEEHAVMVFSKSYCPYCKLAKEVLTKEGAKFHAIELDKRDDGNAIQNALLKLTGQKTVPNVFVGGKSIGGGSETKALSQSGELKKKLVAAKAL 116
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Match: A9NY07_PICSI (Glutaredoxin domain-containing protein n=5 Tax=cellular organisms TaxID=131567 RepID=A9NY07_PICSI) HSP 1 Score: 115 bits (287), Expect = 3.490e-31 Identity = 57/96 (59.38%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 7 KELVGKHGVVVYSKSYCPFCTKAKNALTAIGAKFEVVELDKMSNGGAIQDALQSITGQRSVPNVFIGGETIGGGDDTVRLHKSGELLTKVTAAGAV 294
KE+V + VVV+SK+YCP+CT+ K L+++GAK +VVELD S+G IQ ALQ TGQR+VPNVFIGG IGG DDTV H SG+L+ +T AG V
Sbjct: 20 KEIVSSNSVVVFSKTYCPYCTQVKQLLSSLGAKTKVVELDTESDGKEIQTALQEWTGQRTVPNVFIGGTHIGGCDDTVAKHNSGKLVPLLTEAGGV 115
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Match: A0A4Y7JHQ9_PAPSO (Glutaredoxin domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JHQ9_PAPSO) HSP 1 Score: 114 bits (286), Expect = 4.030e-31 Identity = 56/96 (58.33%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 7 KELVGKHGVVVYSKSYCPFCTKAKNALTAIGAKFEVVELDKMSNGGAIQDALQSITGQRSVPNVFIGGETIGGGDDTVRLHKSGELLTKVTAAGAV 294
KE+V + VVVYSKSYCPFC + K L+ +GA F+ VELDK S+G Q AL TGQR+VPNVFIGG IGG D T LHK+G+L+ +T AGA+
Sbjct: 7 KEIVSSNPVVVYSKSYCPFCVQVKKLLSELGASFKAVELDKESDGNETQSALAQWTGQRTVPNVFIGGNHIGGCDSTTGLHKAGKLVPLLTEAGAI 102 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig143.31.1 >prot_P-littoralis_Contig143.31.1 ID=prot_P-littoralis_Contig143.31.1|Name=mRNA_P-littoralis_Contig143.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=99bp SIKELVGKHGVVVYSKSYCPFCTKAKNALTAIGAKFEVVELDKMSNGGAIback to top mRNA from alignment at P-littoralis_Contig143:131801..133008+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig143.31.1 ID=mRNA_P-littoralis_Contig143.31.1|Name=mRNA_P-littoralis_Contig143.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1208bp|location=Sequence derived from alignment at P-littoralis_Contig143:131801..133008+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig143:131801..133008+ >mRNA_P-littoralis_Contig143.31.1 ID=mRNA_P-littoralis_Contig143.31.1|Name=mRNA_P-littoralis_Contig143.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=297bp|location=Sequence derived from alignment at P-littoralis_Contig143:131801..133008+ (Pylaiella littoralis U1_48)back to top |