mRNA_P-littoralis_Contig143.14.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Match: A0A6H5JKZ2_9PHAE (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ2_9PHAE) HSP 1 Score: 466 bits (1198), Expect = 8.620e-158 Identity = 253/381 (66.40%), Postives = 284/381 (74.54%), Query Frame = 3
Query: 21 MCRRLALVATLLSFSFTSARAWLCAVRPPCRGRNGFCTRTRSIKLNQPAARTMSSCKDSIDVEEIWPHLAGKRTCATEATGKVIREAWAQDTRS--TAVGYGTSISSSSWSIRRSVVHYTHGETALEGLFARPEGEGLPDRLPGVIIAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRPQSLAARRPITEDRSLMQDRAMAAVRTLGLMEEVDQDRLAAVGYCFGGMAMLDLARMTARSSDGVDDDDVTGDPRLKAVASLHGILAPILPGAGGGNNVVGAKPDDALIGVPRVLVLHATADPFVPPKQIQAMEEEFARRGANVEIVRYGGEALHAFTRPEKTGQADKDAGLQYCKHADEDSWRRVVALLQEE 1157
MCR LA L+S SAR W A+ P F +T +L R S I V++IWP LAGK TCA EA GKVIR AWA T + T G G S SS+SWSIRRSVV Y G+TAL+GL+ RPEGEGLPDRLPGVI+AHTAVGPQEDMILWKLD IA LGYAAFALDMFGTG ALW+R +SLAARRPITEDRSLMQ RA AAVRTL ME +D++RLAAVGYCFGGM +LDLARM DG DD PRLKAVASLHGILAPI PG GG + G DDA + VPRVLVLHATADPFVPP+Q++AMEEE +RRGA +E+VRYGG A+HAFTRPEKT Q D+DAGL YCK+A+EDSWRRVV LL+EE
Sbjct: 1 MCRGLAQFVALVSV-LPSARGWQFALSPR------FAGKTPGTRLR----RVQSMDMKMISVDDIWPQLAGKETCANEAAGKVIRAAWAVATTNPDTTNGRGASSSSASWSIRRSVVEYNDGDTALQGLYTRPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDQIALLGYAAFALDMFGTGRALWNRAESLAARRPITEDRSLMQARATAAVRTLSQMEGIDEERLAAVGYCFGGMTVLDLARMVR--PDG-DDAGANTPPRLKAVASLHGILAPISPGTGGEDGA-GLAADDAALAVPRVLVLHATADPFVPPEQVRAMEEELSRRGARLEVVRYGGSAMHAFTRPEKTSQVDRDAGLSYCKYAEEDSWRRVVELLREE 366
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Match: A0A836CLU0_9STRA (Dienelactone hydrolase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU0_9STRA) HSP 1 Score: 200 bits (508), Expect = 7.480e-56 Identity = 129/329 (39.21%), Postives = 169/329 (51.37%), Query Frame = 3
Query: 204 VEEIWPHLAGKRTCATEATGKVIREAWAQDTRSTAVGYGTSISSSSWSIRRSVVHYT-HGETALEGLFARPEGEGLPDRLPGVIIAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRPQSLAARRPITEDRSLMQDRAMAAVRTLGLMEEVDQDRLAAVGYCFGGMAMLDLARMTARSSDGVDDDDVTGDPRLKAVASLHGILAPILPGAGGGNNVVGAKPDDALIGVP------RVLVLHATADPFVPPKQIQAMEEEFARRGAN-VEIVRYGGEALHAFTRPEKTGQADKDAGLQYCKHADEDSWRRVVALLQEELKQ 1166
+++ WP L G RT A+ ++ W+Q + ++R +V Y H L+G RP + + LP V++AHTAVG Q+D++L LD +A LGY AF LDMFG G A+WDR QSLAAR P+T DRSL+ RA AA+ + VD R+A VGYCFGG+ LD T R+ G+ A + HGILAP PD L RVLVLH ADPFVPP Q++A E E A G ++ Y G A HAFTRPEK +D+ AGL Y A E W + L++ +Q
Sbjct: 2 IDKCWPQLTGLRTSASAEAAAILNNRWSQFELERL-----------FDLQRQIVPYIDHTGLPLQGFVVRPAAQAA-ESLPCVLVAHTAVGIQDDLLLQILDGVAGLGYVAFGLDMFGAGQAVWDREQSLAARAPLTSDRSLLARRAEAALHCATQLRGVDARRVAVVGYCFGGIVALD----TVRAGCGI-----------AAAITFHGILAP-------------PPPDQDLSWCKHYSTGCRVLVLHGGADPFVPPDQVRAFEAEMAAAGVQQCSVIVYDG-ARHAFTRPEKVLDSDRSAGLFYDAAAAEAGWAAMRGCLEQAFEQ 289
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Match: A0A7S0HUL7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUL7_9CRYP) HSP 1 Score: 186 bits (471), Expect = 1.370e-50 Identity = 121/311 (38.91%), Postives = 160/311 (51.45%), Query Frame = 3
Query: 237 RTCATEATGKVIREAWAQDTRSTAVGYGTSISSSSWSIRRSVVHYTHGETALEGLFARPEGEGLPDRLPGVIIAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRPQSLAARRPITEDRSLMQDRAMAAVRTLGLMEEVDQDRLAAVGYCFGGMAMLDLARMTARSSDGVDDDDVTGDPRLKAVASLHGILA-PILPGAGGGNNVVGAKPDDALIGVPRVLVLHATADPFVPPKQIQAMEEEFARRGANVEIVRYGGEALHAFTRPEKTGQADKDAGLQYCKHADEDSWRRVVALLQEELKQ 1166
RT + G+ I+ AW D I +++S V Y+ G L G P+ ++P V++ HTAVG QED + WKL+A+A LG+ AF DMFGTG ALWDR ++L ARR + DR M DR AA T+ + +VD A+G+CFGGMA+LDLAR P L+A S HGIL P LP GG G P + +LV H DPFV + + E R +N + Y G A HAFTRPEKT +D AGL Y + AD DS R+ +L+ L++
Sbjct: 8 RTSYNDEAGRKIQAAWRDD---------ADILQCKHQLKKSSVSYSEGGRELMGEACWPDVGN--QKMPAVLLVHTAVGLQEDFMRWKLEAVASLGFVAFGADMFGTGRALWDREEALEARRELVCDRRRMIDRVKAAATTMMSLPQVDPRGFGALGFCFGGMAVLDLARSGCM-------------PNLEATVSFHGILDDPDLPDDYGGRE--GPVPGE-------ILVCHGEDDPFVSSENLNLFLENLKLRKSNFHLQAYPG-AKHAFTRPEKTEPSDFSAGLFYNEQADRDSSERMKGMLRRRLRR 284
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Match: A0A7S1HA30_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HA30_HEMAN) HSP 1 Score: 177 bits (448), Expect = 2.610e-48 Identity = 105/230 (45.65%), Postives = 131/230 (56.96%), Query Frame = 3
Query: 480 EDMILWKLDAIARLGYAAFALDMFGTGHALWDRPQSLAARRPITEDRSLMQDRAMAAVRTLGLMEEVDQDRLAAVGYCFGGMAMLDLARMTARSSDGVDDDDVTGDPRLKAVASLHGILAPILPGAGGGNNVVGAKPDDALIGVPRVLVLHATADPFVPPKQIQAMEEEFARRGA-NVEIVRYGGEALHAFTRPEKTGQADKDAGLQYCKHADEDSWRRVVALLQEELKQ 1166
ED + WKLD +A GY AF +DMFG G ALWD+ ++LAAR+P+ EDRS M +R M A T ME D R+ A+GYCFGGMA+LDLAR S LKA SLHGIL + + P D V +VLV H +DPFV P+ ++ E + A R A ++ I Y G + HAFTRPEKT + D AGL YC+ AD SW ALL L+Q
Sbjct: 1 EDFMFWKLDKLASQGYLAFGVDMFGAGRALWDKEEALAARKPLREDRSQMIERMMCAYETACSMEVADSARVGAIGYCFGGMAVLDLARSGLPKS-------------LKATVSLHGIL-----------DRLDTPPTDV---VGKVLVCHGGSDPFVTPEMLRDFESDMAARNAEDLHIHTYSG-SKHAFTRPEKTTEGDSAAGLYYCELADAASWAAASALLDSCLRQ 202
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Match: A0A0G4EJ35_VITBC (DLH domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJ35_VITBC) HSP 1 Score: 171 bits (434), Expect = 4.050e-45 Identity = 109/276 (39.49%), Postives = 153/276 (55.43%), Query Frame = 3
Query: 342 WSIRRSVVHYTHGETALEGLFARPEGEGLPDRL----PGVIIAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRPQSLAARRPITEDRSLMQDRAMAAVRTLGLMEEVDQDRLAAVGYCFGGMAMLDLARMTARSSDGVDDDDVTGDPRLKAVASLHGIL-APILPGAGGGNNVVGAKPDDALIGVPRVLVLHATADPFVPPKQIQAMEEEFARRGANVEIVRYGGEALHAFTRPEKTGQADKDAGLQYCKHADEDSWRRVVALLQE 1154
W+ +++ V Y T L GL E + ++ P V++ TAVG +ED + LD A LGY AF +DM+G G A+WD+ +S A R+P+T DR+ +Q R +AA + + +V +D +A VGYCFGGM LDLAR G P +K V S HG+L P + GG + P VLV H + DPF+ P Q QA ++E + + + +I YGG A H+FTRPEK QAD+DAGLQYC ++ S+R A LQ+
Sbjct: 42 WTYKQTDVAYQDEGTELMGLAVWVERDDASRQILGERPCVLVCPTAVGLREDFLFGALDRYASLGYVAFGVDMYGEG-AVWDKGRSRAIRQPLTADRTKLQRRMVAAYQAAQSLPQVQEDNIAVVGYCFGGMCALDLAR--------------AGVP-MKGVVSFHGVLDRPAVDKVPGG------------LSCP-VLVHHGSDDPFISPDQFQAFQQELSDQRTDWQIHIYGG-AKHSFTRPEKVTQADRDAGLQYCPKSERRSYRTTKAFLQD 287
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Match: A0A7S2XY83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY83_9STRA) HSP 1 Score: 161 bits (408), Expect = 7.240e-41 Identity = 120/335 (35.82%), Postives = 166/335 (49.55%), Query Frame = 3
Query: 204 VEEIWPHLAGKRTCATEATGKVIREAWAQDTRSTAVGYGTSISSSSWSIRRSVVHYTHGETA-LEGLFARPEGE--------GLPDRLPGVIIAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGT------GHALWDRPQSLAARRPITEDRSLMQDRAMAAVRTLGLMEEVDQDRLAAVGYCFGGMAMLDLARMTARSSDGVDDDDVTGDPRLKAVASLHGILAPILPGAGGGNNVVGAKPDDALIGVPRVLVLHATADPFVPPKQIQAMEEEFARRGANVEIVRYGGEALHAFTRPEKTGQADKDAGLQYCKHADEDSWRRVVALLQEELK 1163
++ +W +T A+E +V++ A+ D V +G ++IRR+ + Y+ A L GL A P + LP +LPGV++AHTAVG +D ILWKL+AIA LGYAAFALDM+G WDR + RR + EDR Q RA A VD+ R+AA+GYC+GGM +LDLA+ +G P LK V ++HGIL V + D +LI P V + H ADPFV +Q+ A +E+ + + I + G HAFTRPEK ++D G A E SW L + K
Sbjct: 54 LKTLWDFTGDFKTSASEPEAQVLQNAYENDLD---VAHGHE---QGYTIRRTKIPYSDSTQARLSGLLAWPVQDPLPPAGAPALPPKLPGVLVAHTAVGNGDDFILWKLEAIASLGYAAFALDMYGEEASGAHNEGAWDRAVNAEVRRSLREDRLSQQARARAGYEVFASQPMVDESRMAALGYCYGGMVVLDLAK--------------SGVP-LKGVGTMHGILD------------VPKELDTSLIQCP-VQLYHGKADPFVSQEQLVAFQEDMNKNDISWNIHSFPGIG-HAFTRPEKL-LFEEDVGQN---DASEKSWNSFKVFLDKVFK 349
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Match: A0A1Y6D2S3_9GAMM (Dienelactone hydrolase n=2 Tax=Methylomagnum ishizawai TaxID=1760988 RepID=A0A1Y6D2S3_9GAMM) HSP 1 Score: 157 bits (396), Expect = 1.980e-40 Identity = 112/273 (41.03%), Postives = 142/273 (52.01%), Query Frame = 3
Query: 348 IRRSVVHYTHGETALEGLFARPEGEGLPDRLPGVIIAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRPQSLAA-RRPITEDRSLMQDRAMAAVRTLGLMEEVDQDRLAAVGYCFGGMAMLDLARMTARSSDGVDDDDVTGDPRLKAVASLHGILAPILPGAGGGNNVVGAKPDDALIGVPRVLVLHATADPFVPPKQIQAMEEEFARRGANVEIVRYGGEALHAFTRPEKTGQADKDAGLQYCKHADEDSWRRVVALLQEELK 1163
I+ V YTH +TALEG FA P LP V+IAH G +E+ + K +A LGYAAFALDM+G G L P+ A +P +DR L+Q R AA+ TL L EVD R+AA+G+CFGG+ +LDLAR G D L+ V S HG+ P PG GNN + AK VL LH DP V P+Q+ A+ E + GA+ +I YG +HAFT P D G Y + AD SW + L E LK
Sbjct: 3 IQTRTVDYTHADTALEGFFAYDNRRAQP--LPAVLIAHAWAG-REEFVCDKARKLAELGYAAFALDMYGKG-VLGSGPEENAQLMQPFVQDRVLLQSRITAALDTLRLQPEVDARRIAAMGFCFGGLCVLDLART------GAD---------LRGVVSFHGLFIP--PG-NTGNNKIKAK----------VLALHGFDDPMVKPEQMVALGHELTQAGADWQIHAYG-HTVHAFTNPRAN---DPGFGTVYQETADRRSWESLKDFLAEVLK 239
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Match: A0A4V1Z9F2_9GAMM (Dienelactone hydrolase family protein n=2 Tax=Methylococcaceae TaxID=403 RepID=A0A4V1Z9F2_9GAMM) HSP 1 Score: 150 bits (378), Expect = 6.850e-38 Identity = 101/266 (37.97%), Postives = 134/266 (50.38%), Query Frame = 3
Query: 363 VHYTHGETALEGLFARPEGEGLPDRLPGVIIAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRPQSLAARRPITEDRSLMQDRAMAAVRTLGLMEEVDQDRLAAVGYCFGGMAMLDLARMTARSSDGVDDDDVTGDPRLKAVASLHGILAPILPGAGGGNNVVGAKPDDALIGVPRVLVLHATADPFVPPKQIQAMEEEFARRGANVEIVRYGGEALHAFTRPEKTGQADKDAGLQYCKHADEDSWRRVVALLQEEL 1160
+ Y HG LEG A E LP LP V+IAH A G ++D + K +A LGYAAFALDM+G G Q+ +P DR+L+Q R A+ + + +VD DR+AA+G+CFGG+ +LDLAR A L+ V S HG+ +P AG N + AK VL LH DP VPP+Q+ A+ +E GA+ +I YG HAFT P D G Y AD SW + + L+E L
Sbjct: 8 IDYRHGPQPLEGFLAYDES--LPGPLPAVLIAH-AWGGRDDFVCGKARRLAELGYAAFALDMYGKGVLGTGPEQNAQLMQPFMADRALLQGRMQQALEVVKALPQVDPDRVAAMGFCFGGLCVLDLARSGAE---------------LRGVISFHGLF---VPPAGVPNQPIRAK----------VLALHGYDDPMVPPEQVTALAQELTAAGADWQIHMYG-RTTHAFTNPAAN---DPGFGTVYDATADARSWLSLQSFLREVL 238
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Match: UPI0005EBEB14 (dienelactone hydrolase family protein n=1 Tax=Methyloterricola oryzae TaxID=1495050 RepID=UPI0005EBEB14) HSP 1 Score: 147 bits (370), Expect = 9.620e-37 Identity = 98/267 (36.70%), Postives = 138/267 (51.69%), Query Frame = 3
Query: 363 VHYTHGETALEGLFARPEGEGLPDRLPGVIIAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGHALWDRPQSLAARRPITEDRSLMQDRAMAAVRTLGLMEEVDQDRLAAVGYCFGGMAMLDLARMTARSSDGVDDDDVTGDPRLKAVASLHGILAPILPGAGGGNNVVGAKPDDALIGVPRVLVLHATADPFVPPKQIQAMEEEFARRGANVEIVRYGGEALHAFTRPEKTGQADKDAGLQYCKHADEDSWRRVVALLQEELK 1163
V Y HG T L G A + LP LP V+++H A G +++ K A+ARLGYA FALDM+G ++ P +DR+L+Q R +AA++ + + EVD R+AA+G+CFGG+ +LDLAR G D ++ V S HG+L P N+ G +P A +VL LH DP PP+Q+ A++ E GA+ ++ YG LHAFT P D G Y + AD SW+ + L E LK
Sbjct: 10 VEYAHGSTRLLGFLAWDDS--LPKPLPAVLVSH-AWGGRDEFACGKAQALARLGYAGFALDMYGDARVGSGPEENSRLMAPFMKDRALLQARQLAALQAVRALSEVDGTRVAAIGFCFGGLCVLDLART------GAD---------IRGVVSFHGLLNPP-------ENIAG-RPILA-----KVLALHGHDDPMAPPEQVLALQRELTTAGADWQVQVYG-HTLHAFTNPRAN---DPGFGTVYKEIADRRSWQSMQNFLSEVLK 241
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Match: A0A7S1J2W1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J2W1_9EUGL) HSP 1 Score: 145 bits (366), Expect = 1.240e-36 Identity = 100/232 (43.10%), Postives = 124/232 (53.45%), Query Frame = 3
Query: 504 DAIARLGYAAFALDMFGTGHALWDRPQSLAARRPITEDRSLMQDRAMAAV---------RTLGLMEEVDQDRLAAVGYCFGGMAMLDLARMTARSSDGVDDDDVTGDPRLKAVASLHGILAPILPGAGGGNNVVGAKPD---DALIGVPRVLVLHATADPFVPPKQIQAMEEEFARRGANVEIVRYGGEALHAFTRPEKTGQADKDAGLQYCKHADEDSWRRVVALLQEELK 1163
+A+A LGY AFA+DM G G ALWD ++ AR P+ EDR L++ R AA+ + LG +D DR+AAVGYCFGG+ +LDLAR A P L+ V S HGIL GGG PD DAL PR+LV + ADPFVPP + + E RR A +E V + G A H FTRPEK AD AG Y AD SW + A L + L+
Sbjct: 1 EALASLGYVAFAVDMLGAGRALWDGAEAKTARAPLYEDRRLLRSRMQAALTAASADSFAQALGPNVALDLDRVAAVGYCFGGLCVLDLARGNA--------------PGLRGVVSFHGILD------GGG------LPDPETDALR--PRILVHNGDADPFVPPDKREQFLAEMGRRHAPLEFVSHPG-ARHGFTRPEKVQPADFAAGFGYDPQADAASWGSMKAFLADVLQ 203 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig143.14.1 >prot_P-littoralis_Contig143.14.1 ID=prot_P-littoralis_Contig143.14.1|Name=mRNA_P-littoralis_Contig143.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=383bp MCRRLALVATLLSFSFTSARAWLCAVRPPCRGRNGFCTRTRSIKLNQPAAback to top mRNA from alignment at P-littoralis_Contig143:92239..96478+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig143.14.1 ID=mRNA_P-littoralis_Contig143.14.1|Name=mRNA_P-littoralis_Contig143.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4240bp|location=Sequence derived from alignment at P-littoralis_Contig143:92239..96478+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig143:92239..96478+ >mRNA_P-littoralis_Contig143.14.1 ID=mRNA_P-littoralis_Contig143.14.1|Name=mRNA_P-littoralis_Contig143.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1149bp|location=Sequence derived from alignment at P-littoralis_Contig143:92239..96478+ (Pylaiella littoralis U1_48)back to top |