mRNA_P-littoralis_Contig143.13.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig143.13.1
Unique NamemRNA_P-littoralis_Contig143.13.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: D8LC05_ECTSI (Actin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC05_ECTSI)

HSP 1 Score: 706 bits (1822), Expect = 1.290e-255
Identity = 355/390 (91.03%), Postives = 371/390 (95.13%), Query Frame = 1
Query:   10 RGEEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPFDTVRDIKEKLCYIPTDHGVAPGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHRIFL 1179
            R EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDL LSAEELSTYRARRPESRE YLEYG+  K+ +  + GDHPVRRGVLRDIDEMEKL+DNLFNFELAAYAGAHTPVLMVEPPLNER+QRQEMA +MFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDIT+RLK LLEER HHLPFDTVRD+KE LCYIPTD GVAPGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGK+FAA+ATDGGLASMVMQS+SMCDKDINPDLLGSVVVAGGTTMM GFVERL++DLD++S PGA  MASVIPHPTSHEPGYNAQRKHA WIGGSMLASLSPFKQLQVTRQEYEDSGESIIHRIFL
Sbjct:    5 RTEEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLHLSAEELSTYRARRPESRECYLEYGNTGKDDEAVAAGDHPVRRGVLRDIDEMEKLMDNLFNFELAAYAGAHTPVLMVEPPLNERSQRQEMAAMMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITNRLKGLLEERGHHLPFDTVRDVKESLCYIPTDRGVAPGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKDFAARATDGGLASMVMQSISMCDKDINPDLLGSVVVAGGTTMMAGFVERLQDDLDRVSPPGAPMMASVIPHPTSHEPGYNAQRKHAPWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHRIFL 394          
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A7S2S4R5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4R5_9STRA)

HSP 1 Score: 349 bits (895), Expect = 6.030e-115
Identity = 192/394 (48.73%), Postives = 266/394 (67.51%), Query Frame = 1
Query:   19 EEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYA----GAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDH-HLPFDTVRDIKEKLCYIPTDHGVAPGED-EYELPDGNTVTLDSECRSQAA-ELIF---NPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
            EE   V+D GSSS K G+SGED PR++ P++ +D  L    L ++ +RRPE+R+        D+ +Q      HP++R  + D D+ME++ D++F+ EL  Y     G+ TPVLM EPPL E   R++MA ++FETFK PA+++CNS  L+LFASGRTRG+ LE G G   AVP+FEGF+LNHA LRL+  GQD+T R+  +L ER    LP D+ R IKEKL +I TD  V      E+ELPDG+ +T+DSECR++ A +L+F   +P++     AAQ  D GLA++V +S+ MCDKD+ PDL  SVV++GG+TM PGF ERL+ DL+ + +PG     SV+P     E GY++QRKHA+WIGGSM  SL   K + V+RQE+ED GES++H+
Sbjct:    5 EEGCFVVDAGSSSVKVGYSGEDSPRSIFPAIVDDPVL----LLSF-SRRPEARD------GGDESLQ------HPIQRSRVTDWDKMERMFDHMFDTELHVYPDNGMGSGTPVLMTEPPLVEYKAREKMAQLLFETFKAPAIALCNSGTLSLFASGRTRGVVLECGSGTTSAVPIFEGFSLNHATLRLDVGGQDVTQRMHSMLTERKRMDLPMDSARVIKEKLAHISTDTPVQQEPPAEFELPDGSVITVDSECRNRCATDLLFPAISPESLDLSLAAQP-DNGLAALVQKSILMCDKDLQPDLFNSVVLSGGSTMFPGFSERLRRDLESVVMPGTEF--SVVPDSRQAERGYSSQRKHAAWIGGSMFGSLETAKHVFVSRQEWEDIGESVVHK 378          
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A836CCR4_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCR4_9STRA)

HSP 1 Score: 308 bits (788), Expect = 2.790e-98
Identity = 178/424 (41.98%), Postives = 252/424 (59.43%), Query Frame = 1
Query:   16 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELST-YRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHH-------------LPFDTVRDIKEKLCYI--------------PTDHGVAPGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKI-------SLPGASSMA----SVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
            +E  +IV+DVGS S K G+SG+D+P +V PSV       ++   T  RA+RPE RE Y  Y S   E   A+    PV++G  +   ++E L+ N+F  EL + A A  PVL+ E P   RA+R E A ++FE  K PALS+CN++ L+LFA+GRTRGL +E G G AHAVPVFEG+AL HA LR++ AG+D+T RL  LL+++                L  D VR IKE++C++                       + +YELPDG+ V +  EC ++ AE++F    G          GGLAS    +++MCD+ +  DL G+VV++GGTTM+PGF ER  ++L+         + P A  +     +V+PH  + EPGY AQRK+A+WIGGS++ASLS F+ LQV+RQEYED+G   +HR
Sbjct:    3 DEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDH-ATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFENKHGR---------GGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHR 416          
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A813BCI2_SYMMI (Act22 protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A813BCI2_SYMMI)

HSP 1 Score: 271 bits (694), Expect = 1.110e-84
Identity = 160/398 (40.20%), Postives = 236/398 (59.30%), Query Frame = 1
Query:   13 GEEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPF----DTVRDIKEKLCYIPTD-----HGVAPGEDE---YELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
            G E   +V+D GS   KAGF+G + PRAV PS+    R+ A  +        + ++ Y+  G      +G  T  +P+  G++ + D+MEK+  + F  EL    G H PVL+ E P+N +A R+ M  +MFETF VPA+ V   +VL+L+ASGRT G+ ++ G GV+H VP++EGFAL HA+LR++ AG+D+TH L  ++ ER + L      + VRDIKEKLCY+  D        + G D+   YELPDGN +TL S+ R +  E++F P   GKE +      G+     QS+  CD DI  DL  ++V++GGTTM PG  ERL ++L  +  P    +  V P           +RK++ WIGGS+LASLS F+Q+ +++ EY++SG +I+HR
Sbjct:    6 GLEAVALVLDNGSGMCKAGFAGGESPRAVFPSIVGRPRVRACIIGM------DYKDAYI--GDEALSKKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVEPGKH-PVLLTEAPMNPKANRERMTQLMFETFNVPAMYVEIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGFALPHAILRVDLAGRDLTHYLMKIMTERGYCLTTTAEREIVRDIKEKLCYVALDFDSEMQAASLGSDQEMHYELPDGNVITLGSQ-RFRCPEVLFQPSFVGKEAS------GVHDTTFQSIMKCDLDIRKDLFSNIVLSGGTTMFPGIGERLTKELT-VRAPATMKIKVVAP----------PERKYSVWIGGSVLASLSTFQQMWISKDEYDESGPNIVHR 376          
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A7S2D3U7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3U7_9STRA)

HSP 1 Score: 271 bits (693), Expect = 1.820e-84
Identity = 161/395 (40.76%), Postives = 229/395 (57.97%), Query Frame = 1
Query:   19 EEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAY---AGAH-TPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERD----HHLPFDTVRDIKEKLCYIPTDHGVAPGEDEYELPDGNTVTLDSECR-SQAAELIFNPDAGGKEFAAQATDGGL----ASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESII 1164
            ++  IVID GSSS KAGF+GED+PRAV P+V +   LS  + + Y              GS D  +       HP+RRG++ D D ME+L+D+ F  EL  +    G +  PVLM + P +    R  MA  MFE F+ PAL + NSSV++LFASGRTRG+ LE GGG + +VP+FEGF + +A       GQDIT  L  +L   +    + L  D  RDIKE+   I      A   +EY LPDG  + +D+E + + A  +IF  D  G        D G+    +++V QS+SMCD++I PDL  S+V+AGGTTM+PGF++R+K +L  +    +    +V+P+    E GY  QR+ A+W+G S+ ASL  F+ +QVT+QE++D   S I
Sbjct:    9 KQPVIVIDAGSSSVKAGFAGEDLPRAVFPAVTDPEILSNSKRAEYCD------------GSQDSTI-------HPIRRGIIHDWDNMERLLDHTFGAELEVHPETGGINGVPVLMTDVPHSSAESRGRMAQCMFEYFQAPALYMANSSVMSLFASGRTRGMVLECGGGYSSSVPIFEGFPIKYATCCANIGGQDITSHLHQMLARTEKYSKYELGHDVARDIKERHAVILVPSARAIKSEEYALPDGVLIDIDAEVKFASAGSVIFESDLSGVAATEMPEDNGVLRGVSALVHQSMSMCDRNIQPDLQNSIVLAGGTTMIPGFLDRMKLELQGLEEEDSLVNFNVVPNSKVAERGYGTQRRLAAWVGASIFASLDTFQHVQVTKQEWDDYDRSAI 384          
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A8H8LUL6_9AGAM (Actin n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8LUL6_9AGAM)

HSP 1 Score: 271 bits (692), Expect = 1.960e-84
Identity = 163/397 (41.06%), Postives = 233/397 (58.69%), Query Frame = 1
Query:   16 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPF----DTVRDIKEKLCYIPTDHGV--------APGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
            EE A +VID GS   KAGF+G+D PRAV PS+    R     +   +      ++ Y+  G   +  +G  +  +P+  G++ + D+MEK+  + F  EL      H PVL+ E PLN +A R++M  IMFETF VPA  V   +VL+L+ASGRT G+ L+ G GV+H VP++EGF+L HA+LRL+ AG+D+T  L  LL ER +        + VRDIKEKLCY+  D           +  E  YELPDG  +T+ +E R + AE +F P   GKE      D G+  M   S++ CD DI  DL G++V++GGTTM PG  +R+ ++L   +L  AS    ++  P         +RK++ WIGGS+LASLS F+ L  ++QEY++SG  I+HR
Sbjct:    3 EEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ------KDSYV--GDEAQSKRGILSLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAFYVNVQAVLSLYASGRTTGIVLDSGDGVSHVVPIYEGFSLPHAILRLDLAGRDLTEYLVKLLTERGYSFTTSAEREVVRDIKEKLCYVALDFEQDLQTAAMSSQIEKNYELPDGQVITIGNE-RFRTAEALFQPSLLGKE------DTGIHEMTFNSITKCDLDIRRDLYGNIVLSGGTTMYPGIADRMHKEL--AALAPASMKVKIVAPP---------ERKYSVWIGGSILASLSTFQNLWCSKQEYDESGPGIVHR 372          
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: F0Y9N8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9N8_AURAN)

HSP 1 Score: 270 bits (690), Expect = 6.330e-84
Identity = 182/420 (43.33%), Postives = 233/420 (55.48%), Query Frame = 1
Query:   31 IVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSA-EELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRD--IDEMEKLVDNLFNFELAAY-------AGAH--TPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPFDTVRDIKEKLC----YIPTDHGVAPGED------------------------EYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
            IVID GS+S KAG+SGED PR+V PS+ ++    A   L+    RRPES E + E           +   HP++ G++ +   ++ME+L D  F  EL  Y        GAH    VL+ E P    A R+  A IMFETFKVPAL   NS+ L+LFASGRTRG+ LE G GV+HAVPVFEGFAL HAVLR E AGQD+T  L   L      L F+ VRD+KEKLC            APG D                        EYELPDG  V +    R  A +++F    GG+     A    L  +V QS+ MCD+D  PDL G+VV+AGGTTM+PGF +R+K +L           ++++P       G+   RK A+WIGGSM ASL  FKQ+++ +QE+ED  ESIIHR
Sbjct:    7 IVIDAGSASVKAGYSGEDTPRSVFPSILDEGGAEALSGLARSGGRRPESVECHFE-----------NAAQHPIQHGLVAEGNWEKMERLWDVTFGRELHQYPEGSSASGGAHGGLSVLLAEAPGTPAAARERAAQIMFETFKVPALCFFNSASLSLFASGRTRGVVLESGAGVSHAVPVFEGFALAHAVLRSELAGQDVTSALAANLRRTGSTLGFNVVRDMKEKLCRAQPLAQPGTPAAPGPDGAAAPPXXAXXXXXXXXGAAFADVEYELPDGTMVKVAGAWRGAAPQVLF----GGR-----ADQLALPQLVAQSIGMCDRDFQPDLRGAVVLAGGTTMLPGFCDRMKAEL-----------SAILPE------GHLRVRKFAAWIGGSMFASLETFKQVRIMKQEWEDD-ESIIHR 388          
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A1L9QS94_9CYAN (Actin, cytoplasmic 2 n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A1L9QS94_9CYAN)

HSP 1 Score: 269 bits (687), Expect = 1.100e-83
Identity = 162/397 (40.81%), Postives = 235/397 (59.19%), Query Frame = 1
Query:   16 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPF----DTVRDIKEKLCYIPTDH--------GVAPGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
            ++ A IVID GS   KAGF+G++ PRA+ PS+    R     + T +   P+S   Y+  G   +  +G  T  +P+  G++ + D+MEK+  + F  EL      H PVL+ E PLN +A R++M  IMFETFKVPA+ V   +VL+L+ASGRT G+ L+ G GV+H VP++EG+AL HA++RL+ AG+D+T  L  +L ER + L      + VRDIKEKLCY+  D              E  YELPDG  +TL +E R +  E +F P   G E A      G+      S+  CD DI  DL  + V++GGTTM PG  +R+++++  ++ P  +    +I  P         +RK++ WIGGS+LASLS F+Q+ ++RQEYE+SG SI+HR
Sbjct:    3 DDVAAIVIDNGSGMVKAGFAGDNAPRAIFPSIVGRPRHQGVNIGTGQ---PDS---YI--GDEAQSKRGILTLKNPIEHGIVTNWDDMEKIWHHTFYNELKIDPSQH-PVLLTEAPLNPKANREKMTQIMFETFKVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLVKILAERGYSLNTTAEREIVRDIKEKLCYVALDFEQEMQTAASSRSLEKSYELPDGQVITLGNE-RFRCPETLFQPAFIGMESA------GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEISALAPP--TMKIKIIAPP---------ERKYSVWIGGSILASLSTFQQMWISRQEYEESGPSIVHR 372          
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A388L5T7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L5T7_CHABU)

HSP 1 Score: 269 bits (687), Expect = 1.240e-83
Identity = 161/405 (39.75%), Postives = 234/405 (57.78%), Query Frame = 1
Query:   16 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEEL--------STYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPFDT----VRDIKEKLCYIPTDHG-----VAPG---EDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
            EE + +V D GS   KAGF+G+D PR V PS+   ++ + E++        +T+              G+  +  +G    D+P++ G++ D D+MEK+  + F  EL      H PVL+ E PLN +A R++M  IMFETF VPA  V   +VL+L++SGRT G+ L+ G GV H  P+FEGFAL HA+LRL+ AG D+T  ++ +L ER H     +    VRDIKEKL Y+  D        A G   E  YELPDGN VT+ SE R +  E++FNP   G E A      G+      S+  CD D+  DL G+VV++GG+TM PG  +R+K+++  ++ P A  +  V P           +RK++ WIGGS+LASLS F+Q+ + + EY+++G SI+HR
Sbjct:    4 EEVSAVVCDNGSGMVKAGFAGDDAPRGVFPSIVGQIKDTKEQMVMVGMGLKNTF-------------VGNEAQSKRGILRIDYPIKHGIVSDWDQMEKIWHHTFYNELRVQPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAAYVAIQAVLSLYSSGRTTGIVLDSGDGVTHTAPIFEGFALPHAILRLDLAGSDLTDYMRHILTERGHSFNTSSEREMVRDIKEKLAYVAMDFEHELSLAASGPALEKTYELPDGNIVTIGSE-RFRCPEVLFNPGLIGMESA------GIHETTYTSIMKCDVDVRKDLYGNVVLSGGSTMFPGLPDRMKKEIASLA-PTAVKVKVVAP----------PERKYSVWIGGSILASLSTFQQMWIAKAEYDEAGPSIVHR 376          
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A0L0SJ59_ALLM3 (Actin, cytoplasmic 3 n=9 Tax=Opisthokonta TaxID=33154 RepID=A0A0L0SJ59_ALLM3)

HSP 1 Score: 268 bits (686), Expect = 1.560e-83
Identity = 156/397 (39.29%), Postives = 232/397 (58.44%), Query Frame = 1
Query:   16 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLP----FDTVRDIKEKLCYIPTDHGVAPG--------EDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
            +E A +VID GS   KAGF+G+D PRAV PS+    R +   +   +      ++ Y+  G   +  +G  T  +P+  G++ + D+MEK+  + F  EL      H PVL+ E PLN +  R++M  IMFETF  PA  V   +VL+L+ASGRT G+ L+ G GV H VP++EG+AL HA+ RL+ AG+D+TH L+ +L ER H L      + VRDIKEKLCY+  D+             E  YE+PDG  +++ SE R +  E +F P   G+E        G+      S+  CD DI  DL  +VV++GGTTM PG  +R+++++  ++ P +  +  V P           +RK++ WIGGS+LASLS F+Q+ +++QEY++SG SI+HR
Sbjct:    3 DEVAALVIDNGSGMCKAGFAGDDAPRAVFPSLVGRPRHTGVMVGMGQ------KDSYV--GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKVNREKMTQIMFETFNTPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTHWLQKILMERGHSLTTTAELEIVRDIKEKLCYVALDYEAELATAANSSALEKSYEMPDGQVISIGSE-RFRCPEALFQPSMLGRE------SSGIHETTYSSIMKCDVDIRKDLYNNVVMSGGTTMYPGIADRMQKEITALA-PSSMKVKIVAP----------PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC05_ECTSI1.290e-25591.03Actin n=1 Tax=Ectocarpus siliculosus TaxID=2880 Re... [more]
A0A7S2S4R5_9STRA6.030e-11548.73Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CCR4_9STRA2.790e-9841.98Actin family n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A813BCI2_SYMMI1.110e-8440.20Act22 protein n=5 Tax=Symbiodinium TaxID=2949 RepI... [more]
A0A7S2D3U7_9STRA1.820e-8440.76Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A8H8LUL6_9AGAM1.960e-8441.06Actin n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=17044... [more]
F0Y9N8_AURAN6.330e-8443.33Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A1L9QS94_9CYAN1.100e-8340.81Actin, cytoplasmic 2 n=2 Tax=Cyanobacteria TaxID=1... [more]
A0A388L5T7_CHABU1.240e-8339.75Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A0L0SJ59_ALLM31.560e-8339.29Actin, cytoplasmic 3 n=9 Tax=Opisthokonta TaxID=33... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig143contigP-littoralis_Contig143:87653..91879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LC05
PFAMsActin
Model size1182
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue2.11e-256
EggNOG OGsCOG5277@1|root,KOG0676@2759|Eukaryota
Ec32 ortholog descriptionActin family
Ec32 orthologEc-20_003970.1
DescriptionATP binding
Cds size1182
COG categoryZ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig143.13.1prot_P-littoralis_Contig143.13.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig143 87653..91879 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789671.3688593-CDS-P-littoralis_Contig143:87652..877181680789671.3688593-CDS-P-littoralis_Contig143:87652..87718Pylaiella littoralis U1_48CDSP-littoralis_Contig143 87653..87718 -
1680789671.3853376-CDS-P-littoralis_Contig143:88131..883651680789671.3853376-CDS-P-littoralis_Contig143:88131..88365Pylaiella littoralis U1_48CDSP-littoralis_Contig143 88132..88365 -
1680789671.4015567-CDS-P-littoralis_Contig143:88742..888441680789671.4015567-CDS-P-littoralis_Contig143:88742..88844Pylaiella littoralis U1_48CDSP-littoralis_Contig143 88743..88844 -
1680789671.410794-CDS-P-littoralis_Contig143:89405..895461680789671.410794-CDS-P-littoralis_Contig143:89405..89546Pylaiella littoralis U1_48CDSP-littoralis_Contig143 89406..89546 -
1680789671.42066-CDS-P-littoralis_Contig143:89854..900731680789671.42066-CDS-P-littoralis_Contig143:89854..90073Pylaiella littoralis U1_48CDSP-littoralis_Contig143 89855..90073 -
1680789671.4360003-CDS-P-littoralis_Contig143:90270..903481680789671.4360003-CDS-P-littoralis_Contig143:90270..90348Pylaiella littoralis U1_48CDSP-littoralis_Contig143 90271..90348 -
1680789671.4449925-CDS-P-littoralis_Contig143:90520..906911680789671.4449925-CDS-P-littoralis_Contig143:90520..90691Pylaiella littoralis U1_48CDSP-littoralis_Contig143 90521..90691 -
1680789671.4533236-CDS-P-littoralis_Contig143:91708..918791680789671.4533236-CDS-P-littoralis_Contig143:91708..91879Pylaiella littoralis U1_48CDSP-littoralis_Contig143 91709..91879 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig143.13.1

>prot_P-littoralis_Contig143.13.1 ID=prot_P-littoralis_Contig143.13.1|Name=mRNA_P-littoralis_Contig143.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=394bp
MVTRGEEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELST
YRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNL
FNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSS
VLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHR
LKLLLEERDHHLPFDTVRDIKEKLCYIPTDHGVAPGEDEYELPDGNTVTL
DSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDL
LGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYN
AQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHRIFL*
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mRNA from alignment at P-littoralis_Contig143:87653..91879-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig143.13.1 ID=mRNA_P-littoralis_Contig143.13.1|Name=mRNA_P-littoralis_Contig143.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4227bp|location=Sequence derived from alignment at P-littoralis_Contig143:87653..91879- (Pylaiella littoralis U1_48)
ATGGTGACTCGCGGCGAAGAAGAAGCCACAATCGTGATCGACGTCGGGAG CTCCAGCGCCAAGGCTGGTTTCTCGGGCGAGGATATGCCGAGAGCTGTCT GTCCCTCGGTGGCCGAAGATCTGCGCCTCTCTGCGGAGGAACTGTCCACC TACCGCGCACGGCGTCCCGAGGTGTATGCTGTGTGTGAAGCTCAGCTGAC TATGTGATGTATAGGATTAGCCTCTACCACGAACAAATGGTGTGTAGGAT TAGCCCCCATCACGAACAAATGGTGTACATAGGATTCAGCCCCCATTACG AACACAGCAGTGGGGGTACTGGGTAAGCACCCCTCTGCATACTCACACAC CTACATTTGCACAGGTGGACAAATGCCCCCACTGACCAAGGTACCTGATC TCAAACGACTTTGTGCAGACCTTGTCGAGGTGTTGACCTCGCATTACGAT CGAAATAACCTTGGCAAGGTCTGTACAAAGTGGTGTCATTCGGTGTCATG CACCTTCAGTGGGGGCAAACGTCCACCGGTGTGTTTCTGGGCTAAATTGA CAGCAGAGGGTCTTGCACAGAGCAAGATCTTTCTGGGAAACTCGAAATCA TCGTGGGCAAATATATGTATTCACACCGTCGTTTTGATCTGATCTGCATA TACAACGTATCATATGATATGTATACGAAGTATCGTATGTGTCAAATAAA AATACCAATGTCGGAATGACATCTTGCCTGCAAACTGTACAAGTATACAT GTACAAGCGTAATCTTGGATCAACTCATCATCGTGTCATGTGGATGCAGC TCTGCCGCTGGATCTTCCGTCCATGAATGTCAACAGTCCTGTTGTAGCAC GAATGTGTACATGATGATGAGTGGTGGGCCTGCTCTTTTCCTCACGATCA TCCCTGATTACAGCGGCATAAATGTGCACGCTCTCGACCACCGACAAACA GAGTACTTGTACAGTATGTTCTTTGCAAAAGTAAGGAATGGTAGACGGGT GTTTCGTACTTCGAAATACAAATTACTGTACTTGCACGCAAGACCTCCCA TGCATCTATATATAAGAACTGCTGCGCGTGTGCACACTATGAGAAGATAT CCCAGGTACTACCGTGTGTGATGGCGCACGTCCGTCACCGTTTTTTGACA TCTGCTGTCTTTCTGCTCCTCCTGCAAAATTTCGATAGAGCCGTGAGCGC TACCTGGAGTACGGGAGTGCGGACAAGGAGATGCAAGGCGCATCGACGGG CGACCACCCCGTGCGGCGCGGGGTTCTCAGAGACATCGACGAAATGGAGA AGCTCGTGGACAATCTCTTCAATTTCGAGCTAGCTGCTTACGCTGGTGCA CACACTCCAGTAAGCGACCACCGATGCACTAGTGGGATATCAAGAGATCC TGAAAGGCCTTTATGCCGATGAAACAAATATTGCTTGCATTTTGATCTAT CGTAGCCCACGAGTTCCGCCTCAAAATACACGTCTATGCACCTCGTCACG CGACGGGTTGCACACATGCGTTCCGTTTCAGGTATTGATGGTGGAGCCAC CCTTAAATGAGCGGGCGCAACGACAGGAAATGGCCGGGATTATGTTCGAG ACGTTCAAGGTATTCGTGAGAAGAAGAAGGCCCTTTCGCTACTGCAAAAA ACAATGTGAACAACAACAGCGGTGTAGTTGGCGTTGAGAGTGTGTACAGA TTCAACTTGATAATACATACAATGAATCGGTACACTGCAAGCAGGCACAG TCTCTCAGCGATGCAGCTAGATCCCCTCCGTCCTCGCCCTTTCGCTAATT TTCCAGGTGCCAGCTCTCAGCGTTTGCAACTCTTCCGTGCTGGCGCTCTT CGCCTCCGGAAGGACGCGCGGACTGGCCCTTGAAGTCGGCGGCGGTGTCG CCCACGCCGTCCCCGTGTTTGAGGGCTTTGCGCTCAACCACGCCGTGCTG AGGTTAGAGGGAGCGGGGCAAGACATCACCCACCGATTGAAGCTTCTCTT GGAGGAACGGGATCACCATCTTCCGGTGGGTTGGTTCACGCTGTGGGTGT GTGGTTGTAGGGGATGATGTTGTGTAATGTGATGTGATGTGGTGTGATGC GCCTGGGTGTCTTTTTTACGATCTACCTCACACGAGCTGCTGAAGCCTTG GTGTCATTCTCACCCCCCATTCGATGTTTTCTAAACGTTTACAGCCCGGG CTTATCCAACCGTGGTCATAGGGTGTAAATTAACGTCGTCCAAAAAAATA CCTATAATTAAATGTAAGAACATCCACCCACCGCACAGCCCGTTAACCCT TTTACCACCGTCTCTTGTAATATTTCGTTGCAGTTCGATACGGTTCGAGA CATCAAGGAGAAGCTCTGCTACATACCGACAGACCACGGCGTGGCCCCTG GAGAGGATGAGTACGAGCTGCCGGACGGAAACACGGTCACGCTGGACTCG GAATGCCGCAGCCAGGCGGCCGAGGTATGCCTAGTAGATGTGTTCGGGTT ATCTTTACGGCCGATGTGTTGATGAAGATAGAGAAGGCGAATCAAGAAGA AGAATTAATCGGATTGTATGCTGGGGTCTGGCCAGTTTGCTCGGAAGACG GGGGGTGAACTCTTGGCTTCACCTCCTTTGGTTAGCGAGCGCATGCATGC GCATGGAAGATCCCGTTTGCCAATTGATTGTTTTTTGAGAGGGTAAGTTG ACAGAATATGTGAGAAGCGAGCTTCGTACAAAAGACCGAGACAATGAATT TCACCGATCATGTTGATACTGGACGATGAATTTGCTACATAGTCAAAGTA CCAGCAGGAGACGCTCAGATTGATCGCTGATAAAACCTTTTTTTATCGTG CTGTTGTTATTGTTCTTAAACATACTATTTGCAGTAGGCGCGCACGGAGT TCAATTCAAGCTCGAATCACGAATGCCGAACACCGGAAGCTGGAGCAAAC TTGAGAGAAAAGTACCACAAGATTATTAAAATAATGTTTGAAATTGCACC CTTCATATTCCCTGATGCCGAACGACCAAACGCAGCTGATATTCAACCCT GATGCGGGTGGCAAGGAGTTTGCGGCACAGGCAACAGACGGAGGTCTGGC AAGCATGGTTATGCAGAGCGTGTCCATGTGTGACAAGGTTTGGAAAGATG CCTAACCTAAAACAAAAATGCACGTATATTTTTCACTGGATCTAAAGACC ACCACGATAAGTAGTAAGAATTTGTCGTTTCTTCTTTTCACTTGTTCTTG GCAAAAACGATTTCTTCCTGTCTATTTTCAAAGGCGTCCGTTTCGGTGTG TTCTCAAGCATGATATATTTGGCGCGTTCATGTCATCATCTATTCGTCTG GTAATGGTTTCCCTTAACCGCAAACCACGCGACGTGCGTTCGTAGGAGGA TGTCCGGGACGTGTTTGTAGGCAAATCACGATGACAAAAATCAGCTGTCA TAGCTACGCCTCGACCAATAAAACAAACAACACATGCATGTGTGCATGCA CCCACATCCCTAAGGATATCAACCCCGACCTACTGGGCTCTGTTGTGGTG GCGGGAGGAACGACAATGATGCCGGGTTTCGTCGAGAGGCTGAAAGAGGA CCTGGACAAGATCTCTCTACCGGGGGCCTCTTCGATGGCGAGCGTCATCC CCCACCCCACGAGCCACGAGCCCGGCTACAATGCGCAGAGGAAGCACGCG TCGTGGATAGGAGGGTCGATGTTGGCGTCGCTGTCGCCTTTTAAGCAGGT AGCATATGGTGTGCCAGCAGCCTTTGTATTATGTAAAAGTGTGGTTCTTC GAGGACCACAAAGCGTCACGCGCGGCGGAAGATGACCGCTTGCTCTCCTC TCGGTGCTGCAGAAATGCGATCCTGCAAAGCTGTGGCACTTAAATTCGTC AGTCGTACGTGTACGCTCTGTTTCCTCGTGCGTGTGACTGTGCGTTCAAA AGTCGTGGTAGCGCGTGTACGTATGACATGTGTGTATGCGAACGCATGCC TCGCGCTTCTTTGTTCATATCGGAAAAAGTAAATTACACATTTGCATTCA ACACTTATTTCCCCCGAATTTTCCTGTTTTTTTCCTTTGCTGCTCCTCTC TTTGATCTTCGTGACTCGATACCCGCTCTGTCCGACCGACTTGATATTTG CGGCCCTCCAGCTGCAAGTGACGCGTCAGGAATACGAGGACAGCGGAGAG AGCATAATCCATCGGATATTCTTGTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig143:87653..91879-

>mRNA_P-littoralis_Contig143.13.1 ID=mRNA_P-littoralis_Contig143.13.1|Name=mRNA_P-littoralis_Contig143.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1182bp|location=Sequence derived from alignment at P-littoralis_Contig143:87653..91879- (Pylaiella littoralis U1_48)
ATGGTGACTCGCGGCGAAGAAGAAGCCACAATCGTGATCGACGTCGGGAG
CTCCAGCGCCAAGGCTGGTTTCTCGGGCGAGGATATGCCGAGAGCTGTCT
GTCCCTCGGTGGCCGAAGATCTGCGCCTCTCTGCGGAGGAACTGTCCACC
TACCGCGCACGGCGTCCCGAGAGCCGTGAGCGCTACCTGGAGTACGGGAG
TGCGGACAAGGAGATGCAAGGCGCATCGACGGGCGACCACCCCGTGCGGC
GCGGGGTTCTCAGAGACATCGACGAAATGGAGAAGCTCGTGGACAATCTC
TTCAATTTCGAGCTAGCTGCTTACGCTGGTGCACACACTCCAGTATTGAT
GGTGGAGCCACCCTTAAATGAGCGGGCGCAACGACAGGAAATGGCCGGGA
TTATGTTCGAGACGTTCAAGGTGCCAGCTCTCAGCGTTTGCAACTCTTCC
GTGCTGGCGCTCTTCGCCTCCGGAAGGACGCGCGGACTGGCCCTTGAAGT
CGGCGGCGGTGTCGCCCACGCCGTCCCCGTGTTTGAGGGCTTTGCGCTCA
ACCACGCCGTGCTGAGGTTAGAGGGAGCGGGGCAAGACATCACCCACCGA
TTGAAGCTTCTCTTGGAGGAACGGGATCACCATCTTCCGTTCGATACGGT
TCGAGACATCAAGGAGAAGCTCTGCTACATACCGACAGACCACGGCGTGG
CCCCTGGAGAGGATGAGTACGAGCTGCCGGACGGAAACACGGTCACGCTG
GACTCGGAATGCCGCAGCCAGGCGGCCGAGCTGATATTCAACCCTGATGC
GGGTGGCAAGGAGTTTGCGGCACAGGCAACAGACGGAGGTCTGGCAAGCA
TGGTTATGCAGAGCGTGTCCATGTGTGACAAGGATATCAACCCCGACCTA
CTGGGCTCTGTTGTGGTGGCGGGAGGAACGACAATGATGCCGGGTTTCGT
CGAGAGGCTGAAAGAGGACCTGGACAAGATCTCTCTACCGGGGGCCTCTT
CGATGGCGAGCGTCATCCCCCACCCCACGAGCCACGAGCCCGGCTACAAT
GCGCAGAGGAAGCACGCGTCGTGGATAGGAGGGTCGATGTTGGCGTCGCT
GTCGCCTTTTAAGCAGCTGCAAGTGACGCGTCAGGAATACGAGGACAGCG
GAGAGAGCATAATCCATCGGATATTCTTGTGA
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