mRNA_P-littoralis_Contig143.13.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: D8LC05_ECTSI (Actin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC05_ECTSI) HSP 1 Score: 706 bits (1822), Expect = 1.290e-255 Identity = 355/390 (91.03%), Postives = 371/390 (95.13%), Query Frame = 1
Query: 10 RGEEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPFDTVRDIKEKLCYIPTDHGVAPGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHRIFL 1179
R EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDL LSAEELSTYRARRPESRE YLEYG+ K+ + + GDHPVRRGVLRDIDEMEKL+DNLFNFELAAYAGAHTPVLMVEPPLNER+QRQEMA +MFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDIT+RLK LLEER HHLPFDTVRD+KE LCYIPTD GVAPGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGK+FAA+ATDGGLASMVMQS+SMCDKDINPDLLGSVVVAGGTTMM GFVERL++DLD++S PGA MASVIPHPTSHEPGYNAQRKHA WIGGSMLASLSPFKQLQVTRQEYEDSGESIIHRIFL
Sbjct: 5 RTEEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLHLSAEELSTYRARRPESRECYLEYGNTGKDDEAVAAGDHPVRRGVLRDIDEMEKLMDNLFNFELAAYAGAHTPVLMVEPPLNERSQRQEMAAMMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITNRLKGLLEERGHHLPFDTVRDVKESLCYIPTDRGVAPGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKDFAARATDGGLASMVMQSISMCDKDINPDLLGSVVVAGGTTMMAGFVERLQDDLDRVSPPGAPMMASVIPHPTSHEPGYNAQRKHAPWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHRIFL 394
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A7S2S4R5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4R5_9STRA) HSP 1 Score: 349 bits (895), Expect = 6.030e-115 Identity = 192/394 (48.73%), Postives = 266/394 (67.51%), Query Frame = 1
Query: 19 EEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYA----GAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDH-HLPFDTVRDIKEKLCYIPTDHGVAPGED-EYELPDGNTVTLDSECRSQAA-ELIF---NPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
EE V+D GSSS K G+SGED PR++ P++ +D L L ++ +RRPE+R+ D+ +Q HP++R + D D+ME++ D++F+ EL Y G+ TPVLM EPPL E R++MA ++FETFK PA+++CNS L+LFASGRTRG+ LE G G AVP+FEGF+LNHA LRL+ GQD+T R+ +L ER LP D+ R IKEKL +I TD V E+ELPDG+ +T+DSECR++ A +L+F +P++ AAQ D GLA++V +S+ MCDKD+ PDL SVV++GG+TM PGF ERL+ DL+ + +PG SV+P E GY++QRKHA+WIGGSM SL K + V+RQE+ED GES++H+
Sbjct: 5 EEGCFVVDAGSSSVKVGYSGEDSPRSIFPAIVDDPVL----LLSF-SRRPEARD------GGDESLQ------HPIQRSRVTDWDKMERMFDHMFDTELHVYPDNGMGSGTPVLMTEPPLVEYKAREKMAQLLFETFKAPAIALCNSGTLSLFASGRTRGVVLECGSGTTSAVPIFEGFSLNHATLRLDVGGQDVTQRMHSMLTERKRMDLPMDSARVIKEKLAHISTDTPVQQEPPAEFELPDGSVITVDSECRNRCATDLLFPAISPESLDLSLAAQP-DNGLAALVQKSILMCDKDLQPDLFNSVVLSGGSTMFPGFSERLRRDLESVVMPGTEF--SVVPDSRQAERGYSSQRKHAAWIGGSMFGSLETAKHVFVSRQEWEDIGESVVHK 378
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A836CCR4_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCR4_9STRA) HSP 1 Score: 308 bits (788), Expect = 2.790e-98 Identity = 178/424 (41.98%), Postives = 252/424 (59.43%), Query Frame = 1
Query: 16 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELST-YRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHH-------------LPFDTVRDIKEKLCYI--------------PTDHGVAPGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKI-------SLPGASSMA----SVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
+E +IV+DVGS S K G+SG+D+P +V PSV ++ T RA+RPE RE Y Y S E A+ PV++G + ++E L+ N+F EL + A A PVL+ E P RA+R E A ++FE K PALS+CN++ L+LFA+GRTRGL +E G G AHAVPVFEG+AL HA LR++ AG+D+T RL LL+++ L D VR IKE++C++ + +YELPDG+ V + EC ++ AE++F G GGLAS +++MCD+ + DL G+VV++GGTTM+PGF ER ++L+ + P A + +V+PH + EPGY AQRK+A+WIGGS++ASLS F+ LQV+RQEYED+G +HR
Sbjct: 3 DEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDH-ATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFENKHGR---------GGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHR 416
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A813BCI2_SYMMI (Act22 protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A813BCI2_SYMMI) HSP 1 Score: 271 bits (694), Expect = 1.110e-84 Identity = 160/398 (40.20%), Postives = 236/398 (59.30%), Query Frame = 1
Query: 13 GEEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPF----DTVRDIKEKLCYIPTD-----HGVAPGEDE---YELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
G E +V+D GS KAGF+G + PRAV PS+ R+ A + + ++ Y+ G +G T +P+ G++ + D+MEK+ + F EL G H PVL+ E P+N +A R+ M +MFETF VPA+ V +VL+L+ASGRT G+ ++ G GV+H VP++EGFAL HA+LR++ AG+D+TH L ++ ER + L + VRDIKEKLCY+ D + G D+ YELPDGN +TL S+ R + E++F P GKE + G+ QS+ CD DI DL ++V++GGTTM PG ERL ++L + P + V P +RK++ WIGGS+LASLS F+Q+ +++ EY++SG +I+HR
Sbjct: 6 GLEAVALVLDNGSGMCKAGFAGGESPRAVFPSIVGRPRVRACIIGM------DYKDAYI--GDEALSKKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVEPGKH-PVLLTEAPMNPKANRERMTQLMFETFNVPAMYVEIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGFALPHAILRVDLAGRDLTHYLMKIMTERGYCLTTTAEREIVRDIKEKLCYVALDFDSEMQAASLGSDQEMHYELPDGNVITLGSQ-RFRCPEVLFQPSFVGKEAS------GVHDTTFQSIMKCDLDIRKDLFSNIVLSGGTTMFPGIGERLTKELT-VRAPATMKIKVVAP----------PERKYSVWIGGSVLASLSTFQQMWISKDEYDESGPNIVHR 376
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A7S2D3U7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3U7_9STRA) HSP 1 Score: 271 bits (693), Expect = 1.820e-84 Identity = 161/395 (40.76%), Postives = 229/395 (57.97%), Query Frame = 1
Query: 19 EEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAY---AGAH-TPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERD----HHLPFDTVRDIKEKLCYIPTDHGVAPGEDEYELPDGNTVTLDSECR-SQAAELIFNPDAGGKEFAAQATDGGL----ASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESII 1164
++ IVID GSSS KAGF+GED+PRAV P+V + LS + + Y GS D + HP+RRG++ D D ME+L+D+ F EL + G + PVLM + P + R MA MFE F+ PAL + NSSV++LFASGRTRG+ LE GGG + +VP+FEGF + +A GQDIT L +L + + L D RDIKE+ I A +EY LPDG + +D+E + + A +IF D G D G+ +++V QS+SMCD++I PDL S+V+AGGTTM+PGF++R+K +L + + +V+P+ E GY QR+ A+W+G S+ ASL F+ +QVT+QE++D S I
Sbjct: 9 KQPVIVIDAGSSSVKAGFAGEDLPRAVFPAVTDPEILSNSKRAEYCD------------GSQDSTI-------HPIRRGIIHDWDNMERLLDHTFGAELEVHPETGGINGVPVLMTDVPHSSAESRGRMAQCMFEYFQAPALYMANSSVMSLFASGRTRGMVLECGGGYSSSVPIFEGFPIKYATCCANIGGQDITSHLHQMLARTEKYSKYELGHDVARDIKERHAVILVPSARAIKSEEYALPDGVLIDIDAEVKFASAGSVIFESDLSGVAATEMPEDNGVLRGVSALVHQSMSMCDRNIQPDLQNSIVLAGGTTMIPGFLDRMKLELQGLEEEDSLVNFNVVPNSKVAERGYGTQRRLAAWVGASIFASLDTFQHVQVTKQEWDDYDRSAI 384
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A8H8LUL6_9AGAM (Actin n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8LUL6_9AGAM) HSP 1 Score: 271 bits (692), Expect = 1.960e-84 Identity = 163/397 (41.06%), Postives = 233/397 (58.69%), Query Frame = 1
Query: 16 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPF----DTVRDIKEKLCYIPTDHGV--------APGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
EE A +VID GS KAGF+G+D PRAV PS+ R + + ++ Y+ G + +G + +P+ G++ + D+MEK+ + F EL H PVL+ E PLN +A R++M IMFETF VPA V +VL+L+ASGRT G+ L+ G GV+H VP++EGF+L HA+LRL+ AG+D+T L LL ER + + VRDIKEKLCY+ D + E YELPDG +T+ +E R + AE +F P GKE D G+ M S++ CD DI DL G++V++GGTTM PG +R+ ++L +L AS ++ P +RK++ WIGGS+LASLS F+ L ++QEY++SG I+HR
Sbjct: 3 EEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ------KDSYV--GDEAQSKRGILSLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAFYVNVQAVLSLYASGRTTGIVLDSGDGVSHVVPIYEGFSLPHAILRLDLAGRDLTEYLVKLLTERGYSFTTSAEREVVRDIKEKLCYVALDFEQDLQTAAMSSQIEKNYELPDGQVITIGNE-RFRTAEALFQPSLLGKE------DTGIHEMTFNSITKCDLDIRRDLYGNIVLSGGTTMYPGIADRMHKEL--AALAPASMKVKIVAPP---------ERKYSVWIGGSILASLSTFQNLWCSKQEYDESGPGIVHR 372
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: F0Y9N8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9N8_AURAN) HSP 1 Score: 270 bits (690), Expect = 6.330e-84 Identity = 182/420 (43.33%), Postives = 233/420 (55.48%), Query Frame = 1
Query: 31 IVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSA-EELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRD--IDEMEKLVDNLFNFELAAY-------AGAH--TPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPFDTVRDIKEKLC----YIPTDHGVAPGED------------------------EYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
IVID GS+S KAG+SGED PR+V PS+ ++ A L+ RRPES E + E + HP++ G++ + ++ME+L D F EL Y GAH VL+ E P A R+ A IMFETFKVPAL NS+ L+LFASGRTRG+ LE G GV+HAVPVFEGFAL HAVLR E AGQD+T L L L F+ VRD+KEKLC APG D EYELPDG V + R A +++F GG+ A L +V QS+ MCD+D PDL G+VV+AGGTTM+PGF +R+K +L ++++P G+ RK A+WIGGSM ASL FKQ+++ +QE+ED ESIIHR
Sbjct: 7 IVIDAGSASVKAGYSGEDTPRSVFPSILDEGGAEALSGLARSGGRRPESVECHFE-----------NAAQHPIQHGLVAEGNWEKMERLWDVTFGRELHQYPEGSSASGGAHGGLSVLLAEAPGTPAAARERAAQIMFETFKVPALCFFNSASLSLFASGRTRGVVLESGAGVSHAVPVFEGFALAHAVLRSELAGQDVTSALAANLRRTGSTLGFNVVRDMKEKLCRAQPLAQPGTPAAPGPDGAAAPPXXAXXXXXXXXGAAFADVEYELPDGTMVKVAGAWRGAAPQVLF----GGR-----ADQLALPQLVAQSIGMCDRDFQPDLRGAVVLAGGTTMLPGFCDRMKAEL-----------SAILPE------GHLRVRKFAAWIGGSMFASLETFKQVRIMKQEWEDD-ESIIHR 388
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A1L9QS94_9CYAN (Actin, cytoplasmic 2 n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A1L9QS94_9CYAN) HSP 1 Score: 269 bits (687), Expect = 1.100e-83 Identity = 162/397 (40.81%), Postives = 235/397 (59.19%), Query Frame = 1
Query: 16 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPF----DTVRDIKEKLCYIPTDH--------GVAPGEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
++ A IVID GS KAGF+G++ PRA+ PS+ R + T + P+S Y+ G + +G T +P+ G++ + D+MEK+ + F EL H PVL+ E PLN +A R++M IMFETFKVPA+ V +VL+L+ASGRT G+ L+ G GV+H VP++EG+AL HA++RL+ AG+D+T L +L ER + L + VRDIKEKLCY+ D E YELPDG +TL +E R + E +F P G E A G+ S+ CD DI DL + V++GGTTM PG +R+++++ ++ P + +I P +RK++ WIGGS+LASLS F+Q+ ++RQEYE+SG SI+HR
Sbjct: 3 DDVAAIVIDNGSGMVKAGFAGDNAPRAIFPSIVGRPRHQGVNIGTGQ---PDS---YI--GDEAQSKRGILTLKNPIEHGIVTNWDDMEKIWHHTFYNELKIDPSQH-PVLLTEAPLNPKANREKMTQIMFETFKVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLVKILAERGYSLNTTAEREIVRDIKEKLCYVALDFEQEMQTAASSRSLEKSYELPDGQVITLGNE-RFRCPETLFQPAFIGMESA------GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEISALAPP--TMKIKIIAPP---------ERKYSVWIGGSILASLSTFQQMWISRQEYEESGPSIVHR 372
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A388L5T7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L5T7_CHABU) HSP 1 Score: 269 bits (687), Expect = 1.240e-83 Identity = 161/405 (39.75%), Postives = 234/405 (57.78%), Query Frame = 1
Query: 16 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEEL--------STYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLPFDT----VRDIKEKLCYIPTDHG-----VAPG---EDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
EE + +V D GS KAGF+G+D PR V PS+ ++ + E++ +T+ G+ + +G D+P++ G++ D D+MEK+ + F EL H PVL+ E PLN +A R++M IMFETF VPA V +VL+L++SGRT G+ L+ G GV H P+FEGFAL HA+LRL+ AG D+T ++ +L ER H + VRDIKEKL Y+ D A G E YELPDGN VT+ SE R + E++FNP G E A G+ S+ CD D+ DL G+VV++GG+TM PG +R+K+++ ++ P A + V P +RK++ WIGGS+LASLS F+Q+ + + EY+++G SI+HR
Sbjct: 4 EEVSAVVCDNGSGMVKAGFAGDDAPRGVFPSIVGQIKDTKEQMVMVGMGLKNTF-------------VGNEAQSKRGILRIDYPIKHGIVSDWDQMEKIWHHTFYNELRVQPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAAYVAIQAVLSLYSSGRTTGIVLDSGDGVTHTAPIFEGFALPHAILRLDLAGSDLTDYMRHILTERGHSFNTSSEREMVRDIKEKLAYVAMDFEHELSLAASGPALEKTYELPDGNIVTIGSE-RFRCPEVLFNPGLIGMESA------GIHETTYTSIMKCDVDVRKDLYGNVVLSGGSTMFPGLPDRMKKEIASLA-PTAVKVKVVAP----------PERKYSVWIGGSILASLSTFQQMWIAKAEYDEAGPSIVHR 376
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Match: A0A0L0SJ59_ALLM3 (Actin, cytoplasmic 3 n=9 Tax=Opisthokonta TaxID=33154 RepID=A0A0L0SJ59_ALLM3) HSP 1 Score: 268 bits (686), Expect = 1.560e-83 Identity = 156/397 (39.29%), Postives = 232/397 (58.44%), Query Frame = 1
Query: 16 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTYRARRPESRERYLEYGSADKEMQGASTGDHPVRRGVLRDIDEMEKLVDNLFNFELAAYAGAHTPVLMVEPPLNERAQRQEMAGIMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITHRLKLLLEERDHHLP----FDTVRDIKEKLCYIPTDHGVAPG--------EDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKEFAAQATDGGLASMVMQSVSMCDKDINPDLLGSVVVAGGTTMMPGFVERLKEDLDKISLPGASSMASVIPHPTSHEPGYNAQRKHASWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 1170
+E A +VID GS KAGF+G+D PRAV PS+ R + + + ++ Y+ G + +G T +P+ G++ + D+MEK+ + F EL H PVL+ E PLN + R++M IMFETF PA V +VL+L+ASGRT G+ L+ G GV H VP++EG+AL HA+ RL+ AG+D+TH L+ +L ER H L + VRDIKEKLCY+ D+ E YE+PDG +++ SE R + E +F P G+E G+ S+ CD DI DL +VV++GGTTM PG +R+++++ ++ P + + V P +RK++ WIGGS+LASLS F+Q+ +++QEY++SG SI+HR
Sbjct: 3 DEVAALVIDNGSGMCKAGFAGDDAPRAVFPSLVGRPRHTGVMVGMGQ------KDSYV--GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKVNREKMTQIMFETFNTPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTHWLQKILMERGHSLTTTAELEIVRDIKEKLCYVALDYEAELATAANSSALEKSYEMPDGQVISIGSE-RFRCPEALFQPSMLGRE------SSGIHETTYSSIMKCDVDIRKDLYNNVVMSGGTTMYPGIADRMQKEITALA-PSSMKVKIVAP----------PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 372 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig143.13.1 >prot_P-littoralis_Contig143.13.1 ID=prot_P-littoralis_Contig143.13.1|Name=mRNA_P-littoralis_Contig143.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=394bp MVTRGEEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLRLSAEELSTback to top mRNA from alignment at P-littoralis_Contig143:87653..91879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig143.13.1 ID=mRNA_P-littoralis_Contig143.13.1|Name=mRNA_P-littoralis_Contig143.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4227bp|location=Sequence derived from alignment at P-littoralis_Contig143:87653..91879- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig143:87653..91879- >mRNA_P-littoralis_Contig143.13.1 ID=mRNA_P-littoralis_Contig143.13.1|Name=mRNA_P-littoralis_Contig143.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1182bp|location=Sequence derived from alignment at P-littoralis_Contig143:87653..91879- (Pylaiella littoralis U1_48)back to top |