mRNA_P-littoralis_Contig143.106.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig143.106.1
Unique NamemRNA_P-littoralis_Contig143.106.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Match: A0A6H5JIZ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIZ1_9PHAE)

HSP 1 Score: 991 bits (2562), Expect = 0.000e+0
Identity = 484/509 (95.09%), Postives = 492/509 (96.66%), Query Frame = 2
Query:  278 MPLKEGNTPWFHFDPVLFLPLWIGIWRWAAYLILKGIPSLLYKPIPISEELEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQLSGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAFWEQNMFILVAFAAYILVTRVMKTLMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNREVKVNAQNEIVRTGEFEDASGDE-----KDAPAGLGPEEGSDEWDAQEYEQEGKHEYAGDVGLEMVDVDLEQEREAARHARRAHQYSGGGGEVY 1789
            MPLKEGNTPWFHFDPVLFLPLWIGIWRW AYLILKGIPSLLYKPIPISEELEQGH+PVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQLSGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFE GAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAFWEQNMFILVAFA YILVTRVMKT+MYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNREVKVNAQNEIVRTGEFEDA  +E     K+AP G+ PE GS+EWD QEYEQEGKHEY GDVGLEMVDVDLEQEREAARH++ AHQYSGGGG VY
Sbjct:    1 MPLKEGNTPWFHFDPVLFLPLWIGIWRWGAYLILKGIPSLLYKPIPISEELEQGHLPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQLSGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEAGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAFWEQNMFILVAFACYILVTRVMKTVMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNREVKVNAQNEIVRTGEFEDAEEEEGDAAAKEAPPGMSPE-GSEEWDDQEYEQEGKHEYTGDVGLEMVDVDLEQEREAARHSQHAHQYSGGGGAVY 508          
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Match: A0A381ZXH2_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381ZXH2_9ZZZZ)

HSP 1 Score: 349 bits (896), Expect = 5.640e-104
Identity = 197/431 (45.71%), Postives = 272/431 (63.11%), Query Frame = 2
Query:  326 LFLPLWIGIWRWAAYLILKGIPSLLYKPIPISEELEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATI-----IRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAM--GGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQLSGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAFWEQNMFILVAFAAYILVTRVMKTLMYFTWSRPRPPC--RWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNREVKVNAQNEIVRTGEFEDASGDE 1591
            +  P+ +G +R  AYL+L+ IPS  YKP       +  +   + + +T IIP+YMPE   + CL SW+ N+PK I++V D +  ++V  I  TV    +      IR++ E++PGKR A+ TG    +TEI +F DDD  +   +L++LI+PF D     GG G  QI R K  K+   +I+MDMRL+QRYLE +ATTF GGGS C++GRTMA+R  +     F   FLNE F G+ QLSGDDK LTRLCI SDY M+HQ+ + C +ST+FE+   L  QLLRW RN+ RSDIK++ LER VW KYP+LAV  +D+ ++PFTM  G +  L Y   E    IL+    YI V R  K + YFT+ +P+     R+  Y+  FI   Y GA++KL+AL +L +R+WGNREVKVN  +EIVRTG  E+ + +E
Sbjct:   15 ILFPIALGTFRILAYLLLRLIPSFFYKPYKQKHINKDDNNNYTKEDVTYIIPIYMPEEDLKMCLVSWIKNQPKEIILVPDISCEKEVTEIKNTVLEEMSENNIPNIRIISETRPGKRRALATGYENTNTEIIIFVDDDVWHCDTMLENLIIPFNDKKRNTGGVGPGQICRSKRKKYNIWEIIMDMRLFQRYLEIKATTFFGGGSPCIAGRTMAWRKSMLDETNFVEDFLNETFMGKKQLSGDDKYLTRLCINSDYGMYHQMSKDCYVSTRFEDPPVLFYQLLRWGRNTIRSDIKLICLERKVWCKYPFLAVVMVDRFLTPFTMFIGLILALVYGNIELFYLILL----YIFVIRTFKLIPYFTYFKPKLKYNYRFIPYVPIFILATYAGALLKLWALFSLNNRKWGNREVKVNDNDEIVRTGIMENFNQEE 441          
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Match: A0A3G4ZUE2_9VIRU (Glycosyltransferase family 2 protein n=1 Tax=Edafosvirus sp. TaxID=2487765 RepID=A0A3G4ZUE2_9VIRU)

HSP 1 Score: 258 bits (659), Expect = 1.450e-70
Identity = 149/408 (36.52%), Postives = 235/408 (57.60%), Query Frame = 2
Query:  353 WRWAAYLILKGIPSLLYKPIPIS----EELEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYG-PAVLKSLIMPFK-DPAMGGCGTRQIARPKADKFC-FSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQLSGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAFWEQNMFILVAFAAYILVTRVMKTLMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNREVKVNAQNEIV 1555
            +RW+ +++LK IPS  YK +       E +E+G+   +   +T++I VY P   F + L+S + +RPK + +V     +++V    E +  +   + +++  K  KR  + +G+  V T +    DDD  +  P  L+ L+ PF+ +  +GG G +Q+ R   + FC +  IM DMRL  R+LE  ATT +  GS CLSGRT  YRT L + +GF  Y  +E F G++ LSGDDKC+TR  I + +  +HQ+ + C L+T FE G    +QL RWSRNSWRSDI  LF+ER +W   P+ A    DKM+SPF M+YG     +  +   +  +++ +  ++L +R +K + YFT    R   ++  Y+ PF+  QY+ A+I+++ L T+ DR WG + V V+  N IV
Sbjct:   86 YRWSVFILLKVIPSCCYKQLKYKKATPELIEEGNY-YTCDDVTVVISVYKPPARFSDTLKSILSHRPKKLTVVSSAEGFERV----EEMCSKFPEVTLIKSDKLSKRDKLVSGIKEVKTRLVALTDDDVSWNSPCFLEKLVAPFQHNKKIGGVGCKQVGR--IEGFCDWWGIMADMRLGVRFLELMATTRLDSGSPCLSGRTACYRTDLLQREGFDEYLSHEKFFGRILLSGDDKCITRWIINNGFVTYHQLRDNCELATTFETGWAFLSQLKRWSRNSWRSDITSLFVERKIWCITPFTAFILFDKMLSPFFMLYGITYFPYKLYSMGHYELVIGWFCWLLFSRFLKLIYYFT---NRQKWKYVIYLTPFVIFQYFQALIRIWTLITIMDRGWGTKNVTVDKNNNIV 483          
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Match: A0A1Y1Y7Z3_9FUNG (Polysaccharide synthase n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y7Z3_9FUNG)

HSP 1 Score: 236 bits (602), Expect = 4.090e-64
Identity = 146/413 (35.35%), Postives = 232/413 (56.17%), Query Frame = 2
Query:  314 FDPVLFLPLWI-GIWRWAAYLILKGIPSLLYKPIPISEELEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQL-SGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVL------FYAFWEQNMFILV-AFAAYILVTRVMKTLMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNRE 1525
            F PV F+P  I G++R+  Y I+K +   +Y+PI   E         S + +T+++P       F E   SW+ N PK I+++ + +  + + N+   VNP    IRV+  +K  KR  M  G+    TEI VF DDDA++ P +L+ ++  F+D  MGG GT Q  +    +    +++   RL QR +E  A+T + GG  CLSGRT AYRT + +   F + F N+ +  +  L SGDDK LTR  +   +  + Q+C    L + F+   +   Q+LRW+RN+WRSDI+ L  ER +WR+YP++A T LDK  +PFT++ GP+ VL      +   +   +++++ ++  ++L+TR +K L +F W RP+       Y+  F+   Y+ A++KLYALCTL    WG R+
Sbjct:    8 FFPV-FVPFGIIGLYRYIWY-IIKLMAYFIYEPIQPRENPTYQ----SNRDVTIVVPTIDAGQEFREAAFSWLANDPKEILVITEESMREPLQNLANAVNPEK--IRVLTVAKANKRLQMIEGVRRTTTEILVFVDDDAIWPPTLLQYVLACFEDRRMGGVGTSQSVKAVDRRQTIWEVLAGFRLTQRNIEVAASTHIDGGVCCLSGRTAAYRTAILKDPVFIHSFTNDLWLDKYPLNSGDDKFLTRWMVNHGWSTFVQVCPEAELLSTFKNNWRFLKQVLRWTRNTWRSDIRSLCTERVIWRRYPFVAFTMLDKFFNPFTLLAGPLLVLSLCVKAYKGQYHLPLWVVILSYIFWLLITRCIKLLPHF-WRRPQDIV----YVPAFLLFNYYFAIMKLYALCTLHVTAWGTRQ 407          
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Match: A0A1Y1Y280_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y280_9FUNG)

HSP 1 Score: 234 bits (596), Expect = 3.310e-63
Identity = 146/443 (32.96%), Postives = 233/443 (52.60%), Query Frame = 2
Query:  326 LFLPLWI-GIWRWAAYLILKGIPSLLYKPI-PISEELEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQL-SGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAFWEQN------------------------------MFILVAFAAYILVTRVMKTLMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNREVKVNAQNEIV 1555
            +F+P  I G++R+  +LI K     +Y+PI P++      +  V     T+++P       F+E   SW+ N PK I+I+ +TN    +  +  +VNP    I+V    K  KR  M  G+ + +TEI VFADDDA++ P +L+ ++  F+DP MGG GT Q  +P   +    +++   RL QR +E  A+T + GG  CLSGRT  YRT + +   F + F N+ + G+ QL SGDDK LTR  +   +  + Q C    L + F+   +   Q+LRW+RN+WRSDI+ L  ER +W +YP++A T LDK  +P T++ GP+ V +  +   N                                +L+++  ++L TR++K L +F W RP+       Y+  ++   Y+ AV+K+Y+L TL    WG R+      NE++
Sbjct:   11 VFVPFGIIGLYRYLWFLI-KLSAWWVYRPIKPLANPTYNAYRDV-----TIVVPTIDAGEEFKEAAHSWLANNPKEILIITETNMLGPLQELANSVNPEK--IKVYTVPKANKRLQMVEGIRHTNTEILVFADDDAIWPPTLLEYVLACFEDPKMGGVGTSQRVKPVGKRQTMWEVLAGFRLTQRNIEVAASTHIDGGVCCLSGRTACYRTCILKDPSFIHSFTNDFWLGKYQLNSGDDKFLTRWIVRHGWNTYIQACPEAELLSTFKNNWRFLKQVLRWTRNTWRSDIRSLMTERVIWHRYPFVAFTMLDKFFNPITLLAGPVLVAYLCYKSVNPRNPQDFMPSTNPRRVPGAPPSPNAFHLPIWNVLLSYVVWLLCTRIIKLLPHF-WKRPQDII----YVPAWLIFGYYFAVMKIYSLFTLHVTAWGTRQGVDTDPNEVL 440          
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Match: A0A1Y1YSU5_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YSU5_9FUNG)

HSP 1 Score: 233 bits (593), Expect = 4.820e-63
Identity = 144/412 (34.95%), Postives = 225/412 (54.61%), Query Frame = 2
Query:  314 FDPVLFLPLWI-GIWRWAAYLILKGIPSLLYKPIPISEELEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQL-SGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAFWEQN-------MFILVAFAAYILVTRVMKTLMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNR 1522
            F PV F+P  I G++R+  Y I K     +Y+P      LE        Q +T+++P       F+E   SW+ N PK I+I+ +    + +  + ++V+P  T I+V    +  KR  M  G+ +  TEI VFADDDA++ P  L+ ++  F+D  MGG GT Q  +P        +++   RL QR +E  A+T + GG  CLSGRT AYRT + +   F + F N+ + G+ QL SGDDK LTR  +   +  + Q+C    L + F+   +   Q+LRW+RN+WRSDI+ LF ER +W ++P++A T LDK  +P +++ GP+ V                  +LV++  ++L+TR++K L +F W RP+       ++  F+   Y+ A++KLYAL TL    WG R
Sbjct:    8 FFPV-FIPFGIIGLYRYLWYFI-KLAAYFVYQP---KRPLENPTYRAD-QDVTIVVPTIDAGEEFKEAAHSWLANNPKEILIITEEKMLEPLQQLADSVDP--TRIKVFTVPRANKRLQMVEGIRHTTTEILVFADDDAIWPPTCLEYMLACFEDRRMGGVGTSQSVKPVGKHQTVWEVLAGFRLTQRNIEVAASTHIDGGVCCLSGRTAAYRTSILKDPAFIHNFTNDFWLGKYQLNSGDDKFLTRWMVRHGWNTYVQVCPEAELLSTFKNNWRFLKQVLRWTRNTWRSDIRSLFTERVIWHRFPYVAYTMLDKFFNPISLLAGPVLVTMLCVKAAKGQYHLPLWVVLVSYFTWLLLTRMIKLLPHF-WRRPQDVI----FVPAFLLFNYYFAIMKLYALFTLHVTAWGTR 406          
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Match: J7SBW9_9APHY (Uncharacterized protein n=1 Tax=Fibroporia radiculosa TaxID=599839 RepID=J7SBW9_9APHY)

HSP 1 Score: 233 bits (593), Expect = 4.950e-63
Identity = 142/421 (33.73%), Postives = 232/421 (55.11%), Query Frame = 2
Query:  311 HFDPVLFLPLW-IGIWRWAAYLILKGIPSLLYKPIPISEELEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQL-SGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAF---------------WEQNMFILVAFAAYILVTRVMKTLMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNR 1522
            HF   +F+P   IG +R+  YLI +   SL Y+PIP+ E        ++ + +T+I+P       F+E   SW+  +PK I+I+ +      +  +   V+P  T IRV+      KR  M  G+ +  ++I VFADDDA++ P +L  ++  F+D  +GG GT Q  +P  D+    +++   RL  R +E  A+T + GG  CLSGRT AYRT + +   F + F ++++ G+ QL SGDDK LTR  +   +  + Q C+   L +  +   +   Q+LRW+RN+WRSD++ LF+ER +W  +P++A T +DK+I+PFT++ GP+ V +  +               W     +++++ A++L TR  K L +  W RP+       Y+  FI   Y+ A++K+YAL TL +  WG R
Sbjct:    8 HFP--IFVPFGVIGFYRYLWYLI-RIAASLTYRPIPLPE----NPTYIAEEDVTIIVPTIDAGEEFKEAAHSWLVGKPKEILIITEEKMRGPLQELANAVDP--TRIRVLTVPYANKRLQMSHGIKHTTSDIIVFADDDAIWPPTLLPYVLACFEDQKVGGVGTSQRVQPVGDRMTVWEVLAAFRLSIRNIEIAASTHIDGGLPCLSGRTAAYRTVILKDPEFLHGFTHDYWLGKYQLNSGDDKFLTRWMVSHGWSTYVQCCKEAELLSTMKPNWRFLKQVLRWTRNTWRSDLRSLFMERHIWTAHPYVAYTMVDKLINPFTLLVGPLLVCYVVYKSTIPVDNGGYHLPAWN----VVLSYFAWLLATRTAKLLPHL-WYRPQDVI----YVPAFILFGYYFAIMKIYALFTLHETGWGTR 410          
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Match: B0D1T0_LACBS (Glycosyltransferase family 2 protein n=2 Tax=Laccaria TaxID=29882 RepID=B0D1T0_LACBS)

HSP 1 Score: 232 bits (591), Expect = 2.910e-62
Identity = 137/411 (33.33%), Postives = 228/411 (55.47%), Query Frame = 2
Query:  326 LFLPLW-IGIWRWAAYLILKGIPSLLYKPIPISEELEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQL-SGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAF----------WEQNMFILVAFAAYILVTRVMKTLMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNR 1522
            +F+P   IG +R+  Y I++   SL Y+P+P+ E        ++++ +T+I+P       F+E   SW+  +PK I+I+ +      + ++   V+P    IRV+      KR  M  G+    T+I VFADDDA++ P +L  ++  F+D  +GG GT Q  +P  ++    +++   RL  R +E  ++T + GG  CLSGRT AYRT + +   F + F ++++ G+ QL SGDDK LTR  +   +  + Q C+   L +  +   +   Q+LRW+RN+WRSD++ LF+ER VW  +P++A T +DK+ +PFT++ GP  V +  +          +     IL ++  +++ TR  K L +  W+RP+       Y+  FI   Y+ A++KLYALCTL +  WG R
Sbjct:   11 IFVPFGVIGFYRYLWY-IIRVTASLTYRPVPLPE----NPTYIASEDVTIIVPTIDAGEEFKEAANSWLAGKPKEILIITEEKMLGPLQDLANQVDPER--IRVLTVPFANKRLQMSHGIKNTTTDIIVFADDDAIWPPTLLPYVLACFEDQKVGGVGTSQRVQPVGNRMTVWEVLAAFRLTIRNIEISSSTHIDGGIPCLSGRTAAYRTVILKDPEFLHGFTHDYWLGKYQLNSGDDKFLTRWMVSHGWSTYVQCCKEAELLSTMKPNWRFLKQVLRWTRNTWRSDLRSLFMERHVWTSHPYVAFTMVDKLFNPFTLLVGPCLVSYLMYKSTIPVAQGGYHLPWNILCSYFVWLVATRTFKLLPHL-WTRPQDVI----YVPAFILFGYYFAIMKLYALCTLHETGWGTR 409          
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Match: A0A1Y1Z3I2_9FUNG (Polysaccharide synthase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z3I2_9FUNG)

HSP 1 Score: 230 bits (587), Expect = 3.100e-62
Identity = 142/410 (34.63%), Postives = 224/410 (54.63%), Query Frame = 2
Query:  326 LFLPLWI-GIWRWAAYLILKGIPSLLYKPI-PISEELEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQL-SGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAV--LFYAFWEQNMF-----ILVAFAAYILVTRVMKTLMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNRE 1525
            +F+P  I G++R+  Y ++K +  + YKP  P+             Q +T+++P       F+E   SW+ N PK I+I+ +T     +  +   VNP    IRV    K  KR  M  G+ +V TEI VFADDDA++ P +L  ++  F+D  MGG GT Q  +   +     +++   RL QR +E  A+T + GG  CLSGRT  YRT + +   F + F N+ + G+ QL SGDDK LTR  + + +  + Q C    L + F+   +   Q+LRW+RN+WRSDI+ L  ER +W +YP++A T LDK  +P T++ GP+ V  L Y  ++ N       ++ ++  ++L+TR +K L +F W RP+       ++  F+   Y+  ++K+YAL TL    WG R+
Sbjct:   11 VFIPFGIVGLYRYLWY-VIKLLAYMTYKPRRPLPNPTYHAR-----QDVTIVVPTIDAGEEFKEAAHSWLMNDPKEILIITETKMVGPLQELANLVNPEK--IRVFSVPKANKRLQMVEGIRHVTTEILVFADDDAIWPPTLLDYILACFEDRKMGGVGTSQTVKAVGNFQTVWEVLAGFRLTQRNIEVAASTHIDGGVCCLSGRTACYRTCILKDPAFIHEFTNDFWLGKYQLNSGDDKFLTRWVVKNGWNTYIQACPEAELQSTFKNNWRFLKQVLRWTRNTWRSDIRSLCTERVIWYRYPYVAFTMLDKFFNPITLLAGPVLVGLLCYKSFKGNYHLPLWNVVTSYIIWLLITRCVKLLPHF-WRRPQDII----HVPAFLIFNYYFCIMKIYALFTLHVTAWGTRQ 407          
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Match: A0A1X2HLV2_SYNRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HLV2_SYNRA)

HSP 1 Score: 228 bits (582), Expect = 4.100e-62
Identity = 138/409 (33.74%), Postives = 237/409 (57.95%), Query Frame = 2
Query:  314 FDPVLFLPLWI-GIWRWAAYLILKGIPSLLYKPI-PISEELEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSYQQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDALYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRYLEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQL-SGDDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRSDIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAFWEQNM---FILVAFAAYILVTRVMKTLMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIKLYALCTLKDRRWGNR 1522
            F P+ F+PL + G +R+  YLI K +   +Y+PI PI   L       S + +T+++P       F E  +SW+  +PK I++V + +    +  + +++NP   +I+V+   +  KR  M  G+ +  T+I VFADDD ++ P +L+ ++  F+D ++GG GT Q  +P   +    +I+   RL  R +E  A+T M GG  CLSGRT AYRT + +   F++ F N+++ G+ +L SGDDK LTR  I   +  + Q+C    L + F++  +   Q+LRW+RN+WRSD++ LF ER +W+++P++A T +DK+ +P T++ GP++V+   F + ++    I V++  ++L+TR++K   +      R P   F  +  F+   ++ A +K+YAL TL    WG R
Sbjct:    8 FFPI-FIPLGVVGFYRYLIYLI-KILAWGVYRPIRPIENPLYD-----SKEDVTIVVPTIDAGEEFREAARSWIACKPKEILVVTEESMEGPIRALADSINPE--LIKVLTVPRANKRDQMVKGIQHTKTDILVFADDDVIWQPTMLEYILACFEDESIGGVGTSQAVKPIGKRQTVWEILAGFRLTVRNIEVAASTHMDGGVCCLSGRTAAYRTVILKDPDFQHSFTNDYWRGRYKLNSGDDKFLTRWMISHGWHTYMQVCPEAQLLSTFKDNWRFLRQVLRWTRNTWRSDLRSLFTERFLWKRHPFVAYTMVDKLFNPLTLLSGPVSVMVLCFLQYHLPQWNIAVSYLGWLLLTRLVKLSPHLV----RYPQHIF-AVPAFLIFNFYFAFMKVYALFTLNVTGWGTR 402          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIZ1_9PHAE0.000e+095.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A381ZXH2_9ZZZZ5.640e-10445.71Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A3G4ZUE2_9VIRU1.450e-7036.52Glycosyltransferase family 2 protein n=1 Tax=Edafo... [more]
A0A1Y1Y7Z3_9FUNG4.090e-6435.35Polysaccharide synthase n=2 Tax=Basidiobolus meris... [more]
A0A1Y1Y280_9FUNG3.310e-6332.96Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]
A0A1Y1YSU5_9FUNG4.820e-6334.95Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]
J7SBW9_9APHY4.950e-6333.73Uncharacterized protein n=1 Tax=Fibroporia radicul... [more]
B0D1T0_LACBS2.910e-6233.33Glycosyltransferase family 2 protein n=2 Tax=Lacca... [more]
A0A1Y1Z3I2_9FUNG3.100e-6234.63Polysaccharide synthase n=1 Tax=Basidiobolus meris... [more]
A0A1X2HLV2_SYNRA4.100e-6233.74Nucleotide-diphospho-sugar transferase n=1 Tax=Syn... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig143contigP-littoralis_Contig143:425726..434577 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LC35
PFAMsGlyco_tranf_2_3
Model size4141
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue0.0
EggNOG OGs2CN2Q@1|root,2QTJK@2759|Eukaryota
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-20_004280.1
DescriptionGlycosyltransferase like family 2
Cds size1515
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig143.106.1prot_P-littoralis_Contig143.106.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig143 426003..432228 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789674.9323285-UTR-P-littoralis_Contig143:425725..4260021680789674.9323285-UTR-P-littoralis_Contig143:425725..426002Pylaiella littoralis U1_48UTRP-littoralis_Contig143 425726..426002 +
1680789674.9981053-UTR-P-littoralis_Contig143:432228..4345771680789674.9981053-UTR-P-littoralis_Contig143:432228..434577Pylaiella littoralis U1_48UTRP-littoralis_Contig143 432229..434577 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789674.9458635-CDS-P-littoralis_Contig143:426002..4263081680789674.9458635-CDS-P-littoralis_Contig143:426002..426308Pylaiella littoralis U1_48CDSP-littoralis_Contig143 426003..426308 +
1680789674.9582064-CDS-P-littoralis_Contig143:428389..4286591680789674.9582064-CDS-P-littoralis_Contig143:428389..428659Pylaiella littoralis U1_48CDSP-littoralis_Contig143 428390..428659 +
1680789674.9706237-CDS-P-littoralis_Contig143:430839..4310791680789674.9706237-CDS-P-littoralis_Contig143:430839..431079Pylaiella littoralis U1_48CDSP-littoralis_Contig143 430840..431079 +
1680789674.9815693-CDS-P-littoralis_Contig143:431529..4322281680789674.9815693-CDS-P-littoralis_Contig143:431529..432228Pylaiella littoralis U1_48CDSP-littoralis_Contig143 431530..432228 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig143.106.1

>prot_P-littoralis_Contig143.106.1 ID=prot_P-littoralis_Contig143.106.1|Name=mRNA_P-littoralis_Contig143.106.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=505bp
MPLKEGNTPWFHFDPVLFLPLWIGIWRWAAYLILKGIPSLLYKPIPISEE
LEQGHVPVSTQMMTMIIPVYMPEPGFEECLQSWVDNRPKTIVIVVDTNSY
QQVLNIVETVNPRATIIRVVEESKPGKRAAMYTGLAYVDTEITVFADDDA
LYGPAVLKSLIMPFKDPAMGGCGTRQIARPKADKFCFSDIMMDMRLYQRY
LEYRATTFMGGGSTCLSGRTMAYRTQLFRFDGFKNYFLNEHFAGQLQLSG
DDKCLTRLCIMSDYKMWHQICEVCTLSTQFEEGAKLRAQLLRWSRNSWRS
DIKMLFLERSVWRKYPWLAVTSLDKMISPFTMVYGPMAVLFYAFWEQNMF
ILVAFAAYILVTRVMKTLMYFTWSRPRPPCRWFWYIGPFIFVQYWGAVIK
LYALCTLKDRRWGNREVKVNAQNEIVRTGEFEDASGDEKDAPAGLGPEEG
SDEWDAQEYEQEGKHEYAGDVGLEMVDVDLEQEREAARHARRAHQYSGGG
GEVY*
back to top

mRNA from alignment at P-littoralis_Contig143:425726..434577+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig143.106.1 ID=mRNA_P-littoralis_Contig143.106.1|Name=mRNA_P-littoralis_Contig143.106.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8852bp|location=Sequence derived from alignment at P-littoralis_Contig143:425726..434577+ (Pylaiella littoralis U1_48)
GGCTAGCGCGTGTAGGCTCGGAGCGATCCGAAAGGATACCAAGCCGTGTC CTTCACGCACCTCGCAGGCCAGCACCAGCGCGCGTGACTGCCAGAGGGCG TGGTTGGTTCGCTGCAATTCGACGTCCTACCTCCTAGTTCGTCCGGACTC GGGTTGAAATCGGGCTGGAGGGCGAAAAGTTTCCCTTGGACAAAAGAAAC CTACGGCGAAGCGATAAGACAGCAAAGGGCACAGGGTTACGAATTGCGGC AAGAGGAGGGAAGCGAAGAGCCTCACCATGCCGCTCAAGGAGGGAAACAC ACCGTGGTTCCACTTTGACCCGGTGCTGTTCTTGCCTCTGTGGATCGGAA TTTGGCGTTGGGCAGCTTATCTGATTTTGAAAGGAATTCCGAGTCTTTTG TATAAGCCGATACCCATCTCGGAGGAGCTCGAACAGGGGCATGTGCCGGT ATCGACACAGATGATGACCATGATCATCCCGGTGTACATGCCCGAGCCCG GGTTCGAGGAGTGCCTCCAGAGCTGGGTCGACAACCGACCGAAAACAATC GTTATCGTGGTGGACACCAACTCTTATCAACAGGTGAGGTATTGGAGGTG TGGTGTTTTCTTCTCTTTTTCCAAACGAAATTGAAACTTTTTATCCGAGC CGGAGTGAAGGAGTATTTGAGATCATCCCGATGCCATGGGGTAGCCATCA ACTTTTGCCACACACGTGCACACTACAGCAGTAGCGCACGACTTTTTTCG GCACGTATTCTTTCTTTTGGTGCCGCAGGGAAGACACGGCAGATGGCAGG CCATGTGCGCGTTTCCTTTCCTGTCTCGGGCGTGACCTTTGTTGCGATGT CGCGTCAGCCTAATGCGCCGATCTACGTAGACTCAAAGCAAGTCGCCACA TTCTTCATAGCATATGAAATGCCAGTAACTGTGCTTCTCTTTCCACCCCC AACGAAGACGGGAGGTCCCCACACACGCCCAAGAGGGGAAGAGATAACCG TTGGGTGTTCCTCACCACTCACCGGCCTATTTTGCTAGTGTGCGGGGAGT GGTTCAGTTAACCTTTACACTCCCCAACGAGTCGTGTCCCATGCCGAGTT GACTTTGGAGTCAAGCGCCTGTTGCCGAGACACTCCTACACGCGTGACTA GGCGCATCTTCGGATGCAGCCGTATTTCCATTAATAATCTCTACCATGTC AAATTCCTGGAATTCCTGGTGACCTGTGAGTAAATTTCAACAGATTTGCT GTGTGAAAATATTCTGAGTTTACTTGAACGGGATGACGACACTTCGAGCG CCGAACTATCTTCACCGAATTATTCGAATACAGCCGTCAAGCACTCCTAT ACACGTTTTAAATCATACTCCGAGTATGATACATATCAGATCACATTTCA TACCTACAAACCTCTTTTTTTCCAGACCTCTTCTGTACGAGCTTTTGAGT TGTTTGACATCTCCCCGGTGGCCTGCAACGTAACCACCGCCGTTTGATGC AATGCTGAGAGTTGTTTCTTGTTCCCGGGTCTGATTTATAGCGTTTTCAC CCTTCCTCACATGTGTTAATTGCGCGAAAGGCATCAAATCGAACTCAAAT CCTATTAGACCACCAAAACCAAAACTACACGCGTACACACAGCAGTCGTA TCTAGTACAGCAGCACTGGTTTGATTTTCAGAACAAAAACCGTGAAGAAG AGCTGCGATGGGAGGAGTTCGAAGAGAACTTTCTTCTTTCGGAAACCCGA CGAGTAACACCCCGACGGCCCACGATACCCCAGTGGGACACTTTACACCC ATGCTCTGAAGAACTGAAGGCTCTAAATCTCGGCGATTACGTCACTGGTT CACGCGGAACTCAAATCAGTCATAGCCCACCGTTGTTTTTGTTTTCTTCC CGTTCTGACTGTTTTCGCAGACTGTTTGGTCGAAATTCGATTTTGTACAA CTTCTTCTGAACAGCAGTATTGATTTGTGCCTCGCTTTCTTGGGGCAAAG GCTTTCTACACGTGAGCATTGTGCCGTCACATGGGTCGAGACTGCACTCA TTGCCGGAAAAACAACTCCCCGTTGTGTGCGGTATCTTGTCACCTCGCCC CGCGCCGTTGCCCTGAACCAAAAAGAATAAAACGATGAAAAGCAAAACGT CTCTTCTCCCTGATCGCCTTAGGTCTGGGACCCGTGATCTCGGCATCTTT TATCATGGTTGCCATGCATCCGCTTCTTTGGGGGTAATTCGGAACCTAAA GTGTACATGCCGCCTCTCATGGCGTGCGCAGTTCATACCTCGCGCCTTGT TATTGATCGTGCCCATCCCTCGCCGAGCGCGTTGCATGACCGTACATGCT GGAACTATTGTTTTCAGTGTCGATATTACGGTCATGGTACAGCAGTGTCC GATTCAAAAGAGCTTCGTCGCGCGTATAATTTGATATTTTGTTCATCTTC GGTCTGCAGTCTGCCAAAACGAACGAAAAGGGTCCCACGTCCCAAAATGC TGTCCTGCAGCGAAGGGTCTTCGTGATCACTCGACGGAATCACCCTGGTA CTTCGACGTATCATACGACTAATACATAAATACATATATATTCGAACCCG CTAAACAACACCCATTTCCTCTCGCATATACTGGCCGCCTTTTTCCACTT CGCCTCGATGGCAGGTGCTCAACATCGTGGAAACGGTGAACCCTCGCGCC ACCATCATCCGTGTGGTGGAGGAGTCCAAGCCGGGTAAGCGGGCTGCAAT GTACACCGGTCTAGCCTACGTCGACACGGAGATCACCGTGTTCGCCGATG ACGACGCCCTGTACGGCCCCGCCGTGCTCAAGAGCCTGATCATGCCCTTC AAGGACCCGGCCATGGGCGGCTGTGGCACCCGACAGATCGCGCGGCCCAA GGCCGACAAGTTCTGCTTCTCGGACATCATGATGGTGGGTTTCATGGAAG TAATATTTTCATGTCTGGTATTGACATGATACTACACATTGTCCTGCCCA ATTCGAAAGAGAGACGACGGCAGCCCCCGCCCTCTTTCATGTTGTGTCCG ACGTGTTTGCTTAAATACTTGAAACCGCTCGACAACTTTTTGACAATATT TGTTTTTTTATAAAAGTACTCGTGGTTATTCGCTATAGCTTGAATCTCGT GGAATTTTCCAGTTTTCTCACAAAACCTGTACGAGTACGAGAAGCGAAAC AGAGTACAGCAGCAACGGTGACAAGTCATGATATATCTCTGTCGTAGACA TGCAAGCTTCAACTTGAAATCCGACAAGGAAATTTGACGGCAAACCTCTT TCGCGGAAAAGAAGCAGCGAACATACCAAAAGAAAACGACGTTAGAGTCA ATGGATATCAAATTATATCGGCTTATCGCCGGCGATACGGGCAATATCGA TACCGTGAACTTCAAAGGCGGTATGCCGATACGTCATCTTCATCCACGGG GACCCTCTCCTGACCTATCCCCTATTATTTTCTTAGGCACCCCCGTGACC CTTACCTCTTCACGTGGTCAGGATCAGAAATCGCCGGATATCGAGGCCGA AATCGGTCAAATCGACGAATATCGATATCGTCACACGAATTCATGGTGTA TCGCGTAATATCGGCCACTTTTCTCAAATATCTGCAACATATCAAAAATC ACCTTGTTTTTGCCGATAAAATATCACATAGAGCTGTTTTTTTATTGATG TCCATCTCTGGTTAGAGGGGAAAAAAGAAAATCGGTTTCGACCTTCCTCC TGTGTGACCTCGACTGGGTGCACCTACCTTACCAACACCGAAAGGAATTG GTAGCGTACTGGCGTCCAAAGTTGATGGGATACCAGCCCACACACTTGAC ATTTGTTATTATTTCGCCTCTATTCCTGGCTGCTTTTTTCTTTTTTCTTG CGTCTGCGTAGCAGCGGACCAACTTGATGTTCATTGTCTTATCCACTCCT CGATAATCAAAGTGCTATCTTCGACGGGGAGTACCCGCGTATGTTTTGTC TTCAGATTTTCACATTGCGCGTCAAAGTGGAAAGCGATCAATTCGTGAGT AAACAAAATTCGATCGTACCATCGACGAGGGAAAGGGATTGCTGTCCCCT TTCTCGCGATAAAAGCTTAACCAGAGAGGCAAGCACCGCAGAGGGAAGTG GAGAAAAAAAATATCCTGTGTTGATTTCCCCCTGTGTGACCCCCGTTGGA GCGCCTACTTACCCGAAAGGTGTAGAGTGGCGTCCAATGAAAGGGAAGAC AACACACACGCAACTCACTGCATAATACCTGGTACGTATGTACCTGGTAC GTATGATTTAGCGTACAGCAGTACTTGAGAGTATTTCCGATATTTTACCT TTTCCTGTTACTCCCGGAGATTTTTCATTTGGTTGGTTAACAGTTGTTTG TTGTTGTCTTCACGTTAAAAACCATTCCGATCTCTCCTCAGTACCTTCTA ATGTTCGTACTCCACCGATGGATCAGGGACGATTTCCGTGGTCACAGGCT ACTTGCCCCGAAGGTTGTATGTAGGCCCTTGTATGTATCCAGTATACTTC GTACTTGTATATAGTACTCGGGGGTAGGCAGCGCGGTATGGAACATTGTG GAGGACAACTTTACAATTTTCTTTCTTCTGTGATGCACGAAGTATATAAA TGTATCCATGATATACGCAAATAATGTCAAAGAAGATGTCTGGTTAGTGA AGAAAAATCGCGAGCTTCATGATGTGCAAAAAGGCGATGGGGAAGTAGCG CCGCCGGGCGTGAAATCTATATGATCGCACGAAGTGTGCGTAATCAAGTA CACAGCAGGACGATCCGTCAAAGCATACATTCGTCTCTCATCTACTTGTG AAGTACTCGGAGTACAAACGAAAGTATTCACGCAGTACGTACCTGTATCC CACAAGAAGAGGTCCAAGCGCCGTGTAGTCGACGTGAAGTGTGCGGGATT TCCCCGTCGTCCCAACAGGTTCGGGAAGCGTCAGCTCTCCAAACACGTAA TAGCACAAAGCTGCTGTCGATGACACCTTCTCTGGTTCATCTCGCCTCCC TCTGTGACTTAATTTATCTTCTTGCCGCCCTTTGGGTTGATTGTTCTTCC GTTGCGCCCTGCAGGACATGCGTCTGTACCAGAGATATCTGGAGTACCGC GCCACCACCTTCATGGGCGGTGGATCCACGTGCCTGTCAGGCCGAACCAT GGCCTACCGTACACAGCTTTTCCGATTCGACGGCTTCAAGAACTACTTCC TAAACGAGCACTTCGCGGGGCAGTTGCAGCTGTCTGGCGACGACAAGTGC CTGACCCGTCTGTGTATCATGTCAGACTACAAGATGTGGCATCAGATCTG CGAGGTGTGTTGGCGTGCTATTGGTGGAGGTGTGGAGGATTATTCAGTCT TACTACTACTGTGGGAGGCGGGTAATTTTCTTTTTCATGGGCGGTGCTCA CGAGCAGTTACAACATGAGAATCAACATCAATTATCTTTTCGCTCTGGAT TTGGGTTCGCCTCGCCAAGAGAGAGAAGTGGTGGGTTTAGAAAATGTCAA CGCACGGTGTGTAGCAAACGAGTGAGACTCCGTGCACTCTGTCGAATGCC CTCCCCGTCGGGTTGATGATATCCCATCACATGTGTCCGGGCAGACCACA AGTGAAATGGCTTTCGCGCCAGCTGTACACTAATGGAGGTCTCAAGCAAC CCACCCACCAAGTACAGTGTACCTCCGTTCTCTGTTGACCATGTCGCTGT TGATTTTTCTTGGCTGTCATTTGTATTTACCCCGCCCTCATTCCTTTATT CCAGGTGTGCACTCTCTCGACACAGTTCGAGGAGGGCGCCAAGCTCCGCG CGCAGCTTCTCCGCTGGAGCCGCAACTCTTGGCGTTCGGACATCAAGATG CTCTTCCTCGAGCGTTCCGTCTGGCGCAAGTACCCGTGGCTCGCCGTGAC GTCGCTCGACAAGATGATCTCCCCCTTCACCATGGTGTACGGGCCAATGG CAGTTCTTTTCTACGCCTTTTGGGAGCAAAACATGTTCATCCTGGTGGCC TTCGCGGCGTACATCCTTGTGACCCGCGTCATGAAGACTCTCATGTACTT CACGTGGTCCCGTCCGCGTCCCCCCTGCCGCTGGTTCTGGTACATCGGCC CCTTCATCTTCGTGCAGTACTGGGGCGCCGTAATTAAGCTCTACGCCCTG TGCACCCTGAAGGACCGTCGCTGGGGCAACCGCGAGGTTAAGGTTAACGC GCAAAACGAGATCGTTCGCACCGGAGAATTCGAAGACGCCTCCGGAGACG AGAAGGATGCCCCCGCCGGCCTCGGCCCGGAAGAGGGGAGCGATGAGTGG GACGCGCAGGAGTATGAGCAAGAGGGGAAACACGAGTACGCGGGGGATGT TGGGCTCGAGATGGTGGACGTGGACTTGGAGCAAGAGCGAGAGGCTGCCA GGCACGCGAGGCGCGCGCACCAATACAGTGGCGGCGGCGGCGAGGTCTAC TAGATACACTCACGAGAAGGGTTTGAGTAGTTGGAGTGGCGTTTTGCTGT GGTCTGGACTCGCTTGCTTTGTGCTCGTACGTCGGGTGGAGTTCCTTTCG TGTTTTTTTTTCCTCCTTTTTTATGTTGTAAAGGAGGCCTCGCAGGAGTG TTAAACTGTTGGATGTGTTGTGGTGGTGGTGGTGGTGGTGGGTGTGCAGT GTCAGTTGGCAAAATATTATTTGGGGGCGGGGATCCGGGATACACCGTGG ATCCGGGAGTATTTGACTCAGGGTCCGTCCTTTCCTCCCACGCAAGTGAA TGGTGGCAGGTCTTGAGATTTTTGCTCCTTCTTGCGAGGAGAGAAAAATG ATTCGTGTACAAGTATTGAGTATAGTTTATTGTTTAAAGCGGGGGTGGCC CTTCAAAGTGTTGACTGACTCGACCGACTAGGATCTCATGTTTTTAGCTC GTTCGCTGGACCAAAAGAAGGTCGCAAATGCTGCCACGAGCTCCGATCTA GTGAGATAACTGATAGCAGCCAAGGCATGTACGTACGTACGCAAGGTACA GCAGCTAGCGAAAGTATTCGGCTGGAGGTGGGAGGAGCGCCAAGGTCGCT TGAAGGTTGCCCGTATGTTTTTGGATGCCCGCCGGACAAGAGTTCCTGCC GACCCGGAAGACTTAAGTTCGGGAACGGTGTGTCTTGCCCGAAGACTGAA CCGGCTGTCCGCGGTTTTGTGGGCGTCCGTATGTTTTTTTTACCGGCGAC CCCCAGCATTCCTCGTGCAGTTTTTTCCCTCAAAGAAGCGATAAAGCGTC CTGCACCCCTGCTCACACGCACACGTGTTGTAGACTTTTCGGTGGTGGTA GGGGGGTTATCTGGTCGAACAAAATGTGCTGCAGGAAATGTTTGTGAATG TATTGGTACTCTTTTTTTCTTTCCGTTCGTTTGTTTGAGCGTTCGTTCTC ATAGCTGGTAAGTTTCGTCATCGCTTGATTTAATGTACGAGCGTCTCCGA CTGTAAGATTTACGGGGGCGCGGGGCTCCGGGCGGGAGAAGGAAGTCCCG TCAGGGCGCAAGGCGGTAAGATGATGTTGATTTTGGTGTAGGCAGGGGCG GCATCGTTCTACTGTGTGTTGGTGTCCGAAGTCCGGGAGGAATGAAAAGA CGTGTAACGTTACTCACACATTACGTGGTTCATATCTTTTTAACTCATCT TGGACCTGTATTTTATAGCTGTGAACGCGTACTCCAGCTCTTTTCGGGGC AAGCGAGCGTTTTATTCTCGTTCCTGCTCTTGATACTTCCCTGTGTGTGC GATAGAATTGGGCCGTCACGAAGTACGTCGTATCATCTCGCGTGCGAGTT GTCGAGCCAAGGTTTGTTTTTGTCTTGCCTCTTCCTGTTGTCAACGTATT GCCATCATGTGGGGTGGGGGCGGCTTTCGATTGGATAACGAAGCAGTCAA CATGATTGTAGGAAGTAGGCGCTATTTGTGTTTTCGTTGTTCTTCGTTGT GCAAGGTTACCCTCTCTCTGCAACTGCGAGATGTAGAGGTTAACCTGATC TTGAATAATTCCTGGAATTTTTTTCACTCGGCGTCAGTCTTCTTGAACGG AGTCAAATGTGGTTGGTACTGGAAGGTCCACGAAATATATTATCCGTGTA TGAAGTATTCCTCAGGTTTCCTCATGAGTTTATGTAGAACAACTGGGCCG TGCCCTCCCCTTCGACTCGGTGCGAAGTAACGGAGGAAGACGACAGGTTC TTGTGTCAGGATACGCGGTCCGCTAGCGGGAGGGCAATCAGATGAGATGA TAAATGGAGAGCGTTGTGGGTTGTTCGTGGAGCACTATCGGCTTGGCAGA CAGACCAACTCCCTTCATGATGAACGAACAGATATATTCGGGTAGAGAGG AGGGGCTGCTTGCTGTCGTCGTCGGAAGGAGAAAGAGTTTCGGACTCTGA AGGAGTGTGACATGTTGGCGAACTCGCAGGTGGTGTCTTTTGCTGTTCAA CGCGTATCGAATTATAACTTACTAATCCCACGATTCACACGTGGTATTTT CGCCACGTTTCCGGGATGCCCGTGTTTTTCAGTCGAAAATCGGGTTGTGA ACTTGATTGTCACAAGTATTTCACACCGCCAGTGCAGTGCGCTCTGTTGA GCGACAACTTTTCGAGGGTGTAGCTCCTCGACCAAAGTAACTTTAGGCCG GTTTAATGTCAGGCCCAAAAAGAGGTTTTGTTGTCCCCCTTTCGCGGGAT GGGGGTCGATACACTCCTGCTGTCCCCCCCCCCCGACTACTGCCGTACAA CTGTTGATTTTGTTTGCTTCTCATCGATCCCATCGCGTGATTTAAAATAA AA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig143:425726..434577+

>mRNA_P-littoralis_Contig143.106.1 ID=mRNA_P-littoralis_Contig143.106.1|Name=mRNA_P-littoralis_Contig143.106.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1515bp|location=Sequence derived from alignment at P-littoralis_Contig143:425726..434577+ (Pylaiella littoralis U1_48)
ATGCCGCTCAAGGAGGGAAACACACCGTGGTTCCACTTTGACCCGGTGCT
GTTCTTGCCTCTGTGGATCGGAATTTGGCGTTGGGCAGCTTATCTGATTT
TGAAAGGAATTCCGAGTCTTTTGTATAAGCCGATACCCATCTCGGAGGAG
CTCGAACAGGGGCATGTGCCGGTATCGACACAGATGATGACCATGATCAT
CCCGGTGTACATGCCCGAGCCCGGGTTCGAGGAGTGCCTCCAGAGCTGGG
TCGACAACCGACCGAAAACAATCGTTATCGTGGTGGACACCAACTCTTAT
CAACAGGTGCTCAACATCGTGGAAACGGTGAACCCTCGCGCCACCATCAT
CCGTGTGGTGGAGGAGTCCAAGCCGGGTAAGCGGGCTGCAATGTACACCG
GTCTAGCCTACGTCGACACGGAGATCACCGTGTTCGCCGATGACGACGCC
CTGTACGGCCCCGCCGTGCTCAAGAGCCTGATCATGCCCTTCAAGGACCC
GGCCATGGGCGGCTGTGGCACCCGACAGATCGCGCGGCCCAAGGCCGACA
AGTTCTGCTTCTCGGACATCATGATGGACATGCGTCTGTACCAGAGATAT
CTGGAGTACCGCGCCACCACCTTCATGGGCGGTGGATCCACGTGCCTGTC
AGGCCGAACCATGGCCTACCGTACACAGCTTTTCCGATTCGACGGCTTCA
AGAACTACTTCCTAAACGAGCACTTCGCGGGGCAGTTGCAGCTGTCTGGC
GACGACAAGTGCCTGACCCGTCTGTGTATCATGTCAGACTACAAGATGTG
GCATCAGATCTGCGAGGTGTGCACTCTCTCGACACAGTTCGAGGAGGGCG
CCAAGCTCCGCGCGCAGCTTCTCCGCTGGAGCCGCAACTCTTGGCGTTCG
GACATCAAGATGCTCTTCCTCGAGCGTTCCGTCTGGCGCAAGTACCCGTG
GCTCGCCGTGACGTCGCTCGACAAGATGATCTCCCCCTTCACCATGGTGT
ACGGGCCAATGGCAGTTCTTTTCTACGCCTTTTGGGAGCAAAACATGTTC
ATCCTGGTGGCCTTCGCGGCGTACATCCTTGTGACCCGCGTCATGAAGAC
TCTCATGTACTTCACGTGGTCCCGTCCGCGTCCCCCCTGCCGCTGGTTCT
GGTACATCGGCCCCTTCATCTTCGTGCAGTACTGGGGCGCCGTAATTAAG
CTCTACGCCCTGTGCACCCTGAAGGACCGTCGCTGGGGCAACCGCGAGGT
TAAGGTTAACGCGCAAAACGAGATCGTTCGCACCGGAGAATTCGAAGACG
CCTCCGGAGACGAGAAGGATGCCCCCGCCGGCCTCGGCCCGGAAGAGGGG
AGCGATGAGTGGGACGCGCAGGAGTATGAGCAAGAGGGGAAACACGAGTA
CGCGGGGGATGTTGGGCTCGAGATGGTGGACGTGGACTTGGAGCAAGAGC
GAGAGGCTGCCAGGCACGCGAGGCGCGCGCACCAATACAGTGGCGGCGGC
GGCGAGGTCTACTAG
back to top