mRNA_P-littoralis_Contig1427.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 299 bits (766), Expect = 4.560e-97 Identity = 150/258 (58.14%), Postives = 182/258 (70.54%), Query Frame = 1
Query: 7 PKHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVITKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQARTMIKRLLGWGAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYY 780
P+ R +RR+RRSW Y+KP++ DGTFR FRMD+ +F L DMLRP+LERN MG+LRNG +PVE+Q+ LR+LAGG + ++ G+VIA+STAY RVI AIN L+C WPE + D ++ RSTNGVI CVGAMDGLFVR +P+ R P SFYSGHKKGFGMNFQ + + AWTMNCPGS NDRTAFK S F +L+ LP G YIVGDAAYP SD VLVPYPGT ++ SQDA N+Y
Sbjct: 39 PQTRDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGM-YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEII--AWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFY 293
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 282 bits (721), Expect = 3.470e-90 Identity = 143/258 (55.43%), Postives = 178/258 (68.99%), Query Frame = 1
Query: 7 PKHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVITKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQARTMIKRLLGWGAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYY 780
P HR + R+RRS+ Y +P++ D TFR FRMD+ DFM L D+LRP+L+R+ MG+LRNGA+PVE+Q+ TLR+LAGG + ++ +VIAKSTAY RVI AIN L C+WP D ++ A ++ RSTNGVI +CVGAMDGLFVR + P + P SFYSGHKK FGMNFQ + WTMNCPGSQNDRTAFK SGF LL +P +IVGDAAYP S+ VLVP PGT ++ SQDA N+Y
Sbjct: 43 PAHRGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGD-DAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEII--TWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFY 297
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 263 bits (672), Expect = 6.620e-83 Identity = 128/219 (58.45%), Postives = 161/219 (73.52%), Query Frame = 1
Query: 130 LVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVITKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQARTMIK-RLLGWGAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYL 783
LVD LRP L++N MG LRNGA+PVE QV TLRWLAGG + + GHVIA+STAY VI A+NAC L C+WPE + D A F++RS+ V+ KCVGA DGLFVR ++P++++ EPN +Y+GHKKGFGMNFQA + R++ AW MNCPGSQNDRTAF SGF KLL LP+G+++VGDAAY S+ V+VP+PGT +S SQDA NYY+
Sbjct: 73 LVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIM---AWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYV 287
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 255 bits (651), Expect = 5.230e-80 Identity = 129/251 (51.39%), Postives = 166/251 (66.14%), Query Frame = 1
Query: 10 KHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVITKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQARTMIKRLLGWGAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQ 762
++RSTL+ R+RR + Y KP+L D TF FRM++DDF LVD LRP L++N G LRNGA+PVEYQV TLRWLAGG + + GHVIA+STAY VI A+NAC L C+WPE + D + + + V+ KCVGAMDGLFVR ++P++++ EPN +Y+GHKKGFGMNFQ C SQNDRTAF SGF KLL LP+G+++VG+AAY S+ V+VP+PGT Q
Sbjct: 44 RNRSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV----------------C--SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPXEQ 275
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 203 bits (516), Expect = 2.900e-60 Identity = 102/180 (56.67%), Postives = 118/180 (65.56%), Query Frame = 1
Query: 241 GGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVITKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQARTMIKRLLGWGAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYY 780
GG + ++ G V AKSTAY RVI AIN +C WPE D ++ RSTN VI CVGAMDGLFV P+ R P FYSGHKKGFGMNFQA + + AWTMNCPGS NDRTAFK SGF ++L+ LPKG YIVGD AYP SD VLVPYPGT ++ SQD+ N+Y
Sbjct: 51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGV-YRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKIT--AWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFY 227
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 202 bits (514), Expect = 3.610e-60 Identity = 109/258 (42.25%), Postives = 143/258 (55.43%), Query Frame = 1
Query: 10 KHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVITKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQARTMIKRLLGWGAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYL 783
++RSTL+ R+RR + + KPLL D TF FRM++DDF L+D LRP L +N MG LR GA+PVEYQ+ TLRWLAGG + + GHVIA+STAY VI A+NAC L C+WPE + D V+ KCVGAMDGLFVR ++P++++ EPN +Y+GH+KG +VGDAAY S+ V+VP+PGT +S SQDA N Y+
Sbjct: 44 RNRSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMD---------------VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV--------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYV 236
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 181 bits (459), Expect = 6.870e-52 Identity = 108/256 (42.19%), Postives = 128/256 (50.00%), Query Frame = 1
Query: 16 RSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVITKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQARTMIKRLLGWGAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYL 783
RSTL+ R RR + Y KP+L D TF FRM++DDF LVD LRP L++N MG LRNGA+PVEYQV TLRWLAGG + GHVIA+STAY C+A Q R M AW MNCPGSQNDRTAF SGF KLL LP+G+++VGDAAY S+ V+VP+PGT +S SQDA NYY+
Sbjct: 46 RSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHAV---------CDA--------------------------------------------------------------------QYRIM--------AWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYM 216
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE) HSP 1 Score: 155 bits (391), Expect = 2.860e-44 Identity = 73/126 (57.94%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 172 MGSLRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFKSRSTNGVITKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQ 549
MG LRNGA+PVE QV TLRWLAGG + + GHVIA+STAY VI A+NAC L C+WPE + D A F++RS+ V+ KCVGAMD LFVR ++P++++ EPN +Y+GHKKGFGMNFQ
Sbjct: 1 MGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ 125
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 158 bits (400), Expect = 6.170e-44 Identity = 73/122 (59.84%), Postives = 96/122 (78.69%), Query Frame = 1
Query: 421 VITKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQARTMIK-RLLGWGAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYL 783
V+ KCVGAMDGLFVR ++P++++ EPN +Y+GHK GFGMNFQA + R++ AWTM+CPGSQNDRTAF + F KLL LP+G+++VGDAAY S+ V+VP+PGT +S SQDA NYY+
Sbjct: 17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIV---AWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYV 135
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE) HSP 1 Score: 160 bits (406), Expect = 3.460e-43 Identity = 98/263 (37.26%), Postives = 140/263 (53.23%), Query Frame = 1
Query: 7 PKHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSLR--NGAVPVEYQVGNTLRWLAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINAC-EALECRWPEKQTDYDSIAAGFKSRSTNGVITKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQAR-TMIKRLLGWGAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYL 783
P R + QR W ++ L F+ +RM F L ++L P L N H LR NGA+ V+ ++ LR LAG LD+ + T Y T VI AIN+ E +P+ + D AA FK +STNG+ + CV +DGLFV+TL P+ +DT ++YSG K +G+N QA T R A T PG+ ND A+ S + + LPKG+Y++GDAAYP S+ +L PYPG + +D+ N++L
Sbjct: 56 PAIRRPVYEPQRLDWDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAIT---PGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHL 315 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1427.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1427.2.1 >prot_P-littoralis_Contig1427.2.1 ID=prot_P-littoralis_Contig1427.2.1|Name=mRNA_P-littoralis_Contig1427.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=261bp QKPKHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPback to top mRNA from alignment at P-littoralis_Contig1427:6259..7946+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1427.2.1 ID=mRNA_P-littoralis_Contig1427.2.1|Name=mRNA_P-littoralis_Contig1427.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1688bp|location=Sequence derived from alignment at P-littoralis_Contig1427:6259..7946+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1427:6259..7946+ >mRNA_P-littoralis_Contig1427.2.1 ID=mRNA_P-littoralis_Contig1427.2.1|Name=mRNA_P-littoralis_Contig1427.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=783bp|location=Sequence derived from alignment at P-littoralis_Contig1427:6259..7946+ (Pylaiella littoralis U1_48)back to top |