mRNA_P-littoralis_Contig1423.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Match: A0A6H5KL66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL66_9PHAE) HSP 1 Score: 221 bits (563), Expect = 1.680e-62 Identity = 117/278 (42.09%), Postives = 158/278 (56.83%), Query Frame = 1
Query: 1 VVVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAAGLESVCEVLGADDKHMFAAKNYRRSHHFLLVMYEGLWSGVVDRYL--------------EERGTPETGLQTNE---------------MNDKFVPWFKRQCTINDTMCFWSGFLLNDMPAYLAIRFGVRASNFKLRVAGIRQFAPFFAGTGKNRYQPLCIEFLTQLSRMPDDDIPVLGKLTSASWDKPP---FASVALDEMMEMFNRVIKQSLTKVTVPYIMKLGMI 738
V+VEGDEET+ MV LKK P KY+W+L PG W ++LH +KALI RYY AG+E V + LG D+KH A YRRSHH L V YE +W V+++Y+ + TP G E + + VPW + + + T+ W+ FLL+D P YL R G R +N+KL VAG R+ AP FA TGKNRYQ L L L+RM D+D+ + L S+ ++ F +V LDE MEM NR +KQ+L ++T Y++KL I
Sbjct: 108 VLVEGDEETYRIMVQLKKGNPEKYKWMLPHPGGWHIMLHMTKALISRYYGAGVEVVAKALGGDNKHAAAGSKYRRSHHLLTVTYEAMWWAVIEKYIVAKKEEAASPAMTTADSATPSNGASAGEGAPGAGGRARGVPVNVEEDVVPWLREEAKEHKTLRLWATFLLDDYPRYLMFRTGGRTANYKLCVAGFRKIAPLFAATGKNRYQQLASWHLLNLARMTDNDLEAVSCLFSSQYNTKNYRNFNNVFLDEFMEMENRTVKQNLGRITQAYMVKLPRI 385
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Match: D7FTC0_ECTSI (Similar to solute carrier family 35, member F4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC0_ECTSI) HSP 1 Score: 216 bits (551), Expect = 9.560e-61 Identity = 113/257 (43.97%), Postives = 155/257 (60.31%), Query Frame = 1
Query: 1 VVVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAAGLESVCEVLGADDKHMFAAKNYRRSHHFLLVMYEGLWSGVVDRYLEER------GTPETG--LQTNEMNDKFVPWFKRQCTINDTMCFWSGFLLNDMPAYLAIRFGVRASNFKLRVAGIRQFAPFFAGTGKNRYQPLCIEFLTQLSRMPDDDIPVLGKLTSASWDKPP---FASVALDEMMEMFNRVIKQSLTKVTVPYIMKLGMI 738
V+VEGDEET+ MV LKK P KY+W++ PG W ++LH +KAL+ RYY AG+E V + LG DD H A YRRS+H L V YE LW V+++Y+ + G P Q ++ VPW K Q + T+ FW+ FLL+D P YL R G R +N+KL VA R AP FA TGKNRYQ L + + L+RM D D+ + L S+ ++ F +V L E+ EM NRV+KQ+L ++T Y+ +L +I
Sbjct: 360 VLVEGDEETYRIMVQLKKGNPEKYKWMVPHPGGWHIMLHVTKALMTRYYGAGIEVVAKALGGDDVHAAAGSKYRRSNHLLTVTYEALWWVVIEQYVAAKQKEAREGPPGAAPPAQPVDIQGDVVPWLKEQAKEHKTLRFWATFLLDDYPTYLMFRTGGRTTNYKLCVAVFRNIAPLFAATGKNRYQQLALWHMLTLARMTDSDLEAVATLFSSQFNTKNYRNFNNVFLGEIQEMMNRVVKQNLGRITQAYMTRLPLI 616
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Match: A0A6H5LAS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAS0_9PHAE) HSP 1 Score: 185 bits (470), Expect = 7.280e-50 Identity = 106/278 (38.13%), Postives = 142/278 (51.08%), Query Frame = 1
Query: 1 VVVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAAGLESVCEVLGADDKHMFAAKNYRRSHHFLLVMYEGLWSGVVDRYLE--------------ERGTPETGLQTNE---------------MNDKFVPWFKRQCTINDTMCFWSGFLLNDMPAYLAIRFGVRASNFKLRVAGIRQFAPFFAGTGKNRYQPLCIEFLTQLSRMPDDDIPVLGKLTSASWDKPP---FASVALDEMMEMFNRVIKQSLTKVTVPYIMKLGMI 738
V+VEGDEET+ MV LKK P KY+W+L PG W ++LH +KALI RYY AG+E V + LG DDKH A YR + TP G E + + VPW + + + T+ W+ FLL+D P YL R G R +N+K+ VAG R+ AP FA TGKNRYQ L L L+RM D+D+ + L S+ ++ F +V LDE MEM NR +KQ+L ++T Y++KL I
Sbjct: 1418 VLVEGDEETYRIMVQLKKGNPEKYKWMLPHPGGWHIMLHMTKALISRYYGAGVEVVAKALGGDDKHAAAGSKYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASPAMTTADSATPSNGASAGEGAPGAGGRARGVPVNVEEDVVPWLREEAKEHKTLRLWATFLLDDYPRYLMFRTGGRTANYKVCVAGFRKIAPLFAATGKNRYQQLASWHLLNLARMTDNDLEAVSCLFSSQYNTKNYRNFNNVFLDEFMEMENRTVKQNLGRITQAYMVKLPRI 1695
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 170 bits (431), Expect = 1.200e-44 Identity = 89/248 (35.89%), Postives = 139/248 (56.05%), Query Frame = 1
Query: 4 VVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAAGLESVCEVLGADDKHMFAAKNYRRSHHFLLVMYEGLWSGVVDRYLEERGTP-ETGLQTNEMNDKFVPWFKRQCTINDTMCFWSGFLLNDMPAYLAIRFGVRASNFKLRVAGIRQFAPFFAGTGKNRYQPLCIEFLTQLSRMPDDDIPVLGKLTSASWDKPPFASVALDEMMEMFNRVIKQSLTKVTVPYIMKLGMIVE 744
++ GDEET+ M ++ +P +Y + PG W LLLH +KA++ RY+ AG+E V + LG D NYRR+HH + + + + YL+ TP + ++ +E+ D V W + + T W FLL+D PAY+A R +R NF+LR+ G+R+ AP F TGK++YQ L ++ LT++SR +D+ V+ +L S S FA + LDE E+ NR+ K ++ I KL I +
Sbjct: 914 ILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLSTPGDRPVEEDEVVDGVVRWIVARTESHKTFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 1161
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Match: A0A6H5K3J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J0_9PHAE) HSP 1 Score: 166 bits (419), Expect = 4.140e-44 Identity = 90/243 (37.04%), Postives = 134/243 (55.14%), Query Frame = 1
Query: 4 VVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAAGLESVCEVLGADDKHMFAAKNYRRSHHFLLVMYEGLWSGVVDRYLEERGTPETGLQTNEMNDKFVPWFKRQCTINDTMCFWSGFLLNDMPAYLAIRFGVRASNFKLRVAGIRQFAPFFAGTGKNRYQPLCIEFLTQLSRMPDDDIPVLGKLTSASWDKPPFASVALDEMMEMFNRVIKQSLTKVTVPYIMKLG 732
++ GDEET+ + +++K + Y L PG W LLLH +KAL+ RY+ AG+E V + LG D+ NYRR+HH L+VM+E S L P + + + V W K++ + T W FLL+D PAY+A R +R +F LR+ +R+ AP F TGK+RYQ L ++ L ++SRM + D+ V+ KL S S K A + LDE + NR+ K ++ +I KL
Sbjct: 202 IIAGDEETYRVLYHIQKQERMAYRQLRRYPGDWHLLLHMAKALLKRYWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMWEARMSLCPKMCLP----PGEDMTAEDADSMVVAWIKKRAAEHKTFALWQQFLLHDFPAYMAFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVD-LAEMSRMSESDLKVIVKLFSVSLSKDACARLGLDERQGLTNRMYKTLTKRILPSFIHKLA 439
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Match: D7FIA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA9_ECTSI) HSP 1 Score: 165 bits (417), Expect = 2.920e-43 Identity = 88/248 (35.48%), Postives = 136/248 (54.84%), Query Frame = 1
Query: 4 VVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAAGLESVCEVLGADDKHMFAAKNYRRSHHFLLVMYEGLWSGVVDRYLEERGTP-ETGLQTNEMNDKFVPWFKRQCTINDTMCFWSGFLLNDMPAYLAIRFGVRASNFKLRVAGIRQFAPFFAGTGKNRYQPLCIEFLTQLSRMPDDDIPVLGKLTSASWDKPPFASVALDEMMEMFNRVIKQSLTKVTVPYIMKLGMIVE 744
++ GDEET+ M ++ P +Y + PG W LLLH +KA++ RY+ AG+E V + LG D NYRR+HH + + + + YL+ TP + ++ +++ D V W + T W FLL+D PAY+A R +R NF LR+ G+R+ AP F TGK++YQ L ++ LT++SR +D+ V+ +L S S FA + LDE E+ NR+ K ++ I KL I +
Sbjct: 155 ILGGDEETYKHMYHVMAQDPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPSDRPVEEDKVVDGVVRWIVARAESRKTFAVWKQFLLHDYPAYIAFRTALRTGNFGLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYLRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 402
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Match: A0A6H5K2D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D4_9PHAE) HSP 1 Score: 165 bits (417), Expect = 6.480e-43 Identity = 84/207 (40.58%), Postives = 121/207 (58.45%), Query Frame = 1
Query: 1 VVVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAAGLESVCEVLGADDKHMFAAKNYRRSHHFLLVMYEGLWSGVVDRYLEERGTPETGLQTNEMNDKFVPWFKRQCTINDTMCFWSGFLLNDMPAYLAIRFGVRASNFKLRVAGIRQFAPFFAGTGKNRYQPLCIEFLTQLSRMPDDDIPVLGKLTSASW 621
V+VEGD+ET+SFMV K+++P +WL+ PG W +LLHASKAL+ YY AG+E++ +LGA+DKH NYRR+HH L V+ EG V W +++ + + T+ W+ FLL D PAYLA+R G R N+ + V +R+ AP TGK Y LCI LT L+R+P +++ +G L +AS+
Sbjct: 470 VLVEGDQETYSFMVKAKQTKPEVCKWLIPHPGGWHILLHASKALLQLYYGAGVEAIARLLGAEDKHAADGSNYRRNHHLLTVV-EGQEVSVT------------------------AWLRQRASTHQTLKLWTPFLLEDYPAYLALRMGGRTGNYPMCVMALRKLAPMVGATGKTNYVTLCINHLTTLARIPANNLETIGTLFTASF 651
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Match: A0A6H5JDT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT2_9PHAE) HSP 1 Score: 156 bits (394), Expect = 2.780e-40 Identity = 88/244 (36.07%), Postives = 132/244 (54.10%), Query Frame = 1
Query: 4 VVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAAGLESVCEVLGADDKHMFAAKNYRRSHHFLLVMYEGLWSGVVDRYLEERGTPETGLQTNEMNDKFVPWFKRQCTINDTMCFWSGFLLNDMPAYLAIRFGVRASNFKLRVAGIRQFAPFFAGTGKNRYQPLCIEFLTQLSRMPDDDIPVLGKLTSASWDKPPFASVALDEMMEMFNRVIKQSLTKVTVP-YIMKLG 732
++ GDEET+ + +++K + Y PG W L LH +KAL+ RY+ AG+E V + LG D+ NYRR+HH L+VM RG + + + V W K++ + T W FLL+D PAY+ R +R +F LR+ +R+ AP F TGK+RYQ L ++ L ++S M + D+ V+ +L S S K A + LDE E+ NR+ K +LTK +P +I KL
Sbjct: 216 IIAGDEETYRVLYHIQKQERVAYRQFRRYPGDWHLHLHVAKALLKRYWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVM------------ASTRGD----MTAEDADSMVVAWIKKRAAKHKTFALWEQFLLHDFPAYVTFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVDHLAEMSTMSESDLKVIAELFSVSLSKDACARLGLDERQEVANRMYK-TLTKWILPSFIHKLA 442
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE) HSP 1 Score: 153 bits (387), Expect = 5.730e-39 Identity = 84/248 (33.87%), Postives = 131/248 (52.82%), Query Frame = 1
Query: 4 VVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAAGLESVCEVLGADDKHMFAAKNYRRSHHFLLVMYEGLWSGVVDRYLEERGTP-ETGLQTNEMNDKFVPWFKRQCTINDTMCFWSGFLLNDMPAYLAIRFGVRASNFKLRVAGIRQFAPFFAGTGKNRYQPLCIEFLTQLSRMPDDDIPVLGKLTSASWDKPPFASVALDEMMEMFNRVIKQSLTKVTVPYIMKLGMIVE 744
++ GDEET+ M ++ +P +Y + PG W LLLH +K ++ RY+ AG+E V + LG D NYRR+HH + + + YLE TP + ++ + + D V W + + T W FLL+D Y+A R +R NF+LR+ G+R+ AP TGK++YQ L + LT++S +D+ V+ +L S S FA + LDE E+ NR+ K ++ I KL I +
Sbjct: 25 ILGGDEETYKHMYHVMAQKPREYRQVRRYPGDWHLLLHMAKVMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHAMAFWAAFIALCRQEYLESLPTPGDRPVEEDNVVDGVVRWIVARAESHKTFAVWKQFLLHDYHEYIAFRTALRTGNFRLRLEGLRRIAPILFVTGKDKYQFLVADHLTEVSGYSRNDMRVVSELFSVSHGPDTFARIGLDERKEVSNRLYKTLAKRILSSTIEKLTPIAQ 272
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Match: A0A6H5L1K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K3_9PHAE) HSP 1 Score: 151 bits (382), Expect = 3.890e-38 Identity = 86/250 (34.40%), Postives = 133/250 (53.20%), Query Frame = 1
Query: 4 VVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAAGLESVCEVLGADDKHMFAAKNYRRSHHFLLVMYEGLWSGVVDRYLEERGTPETGLQTNEMNDKFVPWFKRQCTINDTMCFWSGFLLNDMPAYLAIRFGVRASNFKLRVAGIRQFAPFFAGTGKNRYQPLC---IEFLTQLSRMPDDDIPVLGKLTSASWDKPPFASVALDEMMEMFNRVIKQSLTKVTVPYIMKLGMIVE 744
++ GDEET+ M ++ +P +Y + PG W LLLH +KA++ RY+ AG+E V + LG D NYRR+HH + W+ + +EE +++ D V W + + W FLL+D PAY+A R +R NF+LR+ G+R+ AP F TGK++YQ L ++ LT++SR +D+ V+ +L S S FA + LDE E+ NR+ K ++ I KL I +
Sbjct: 25 ILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAF----WAAFMALPVEE----------DKVVDGVVRWIVARAESHKAFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDTFARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQ 260 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1423.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1423.3.1 >prot_P-littoralis_Contig1423.3.1 ID=prot_P-littoralis_Contig1423.3.1|Name=mRNA_P-littoralis_Contig1423.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=250bp VVVEGDEETHSFMVNLKKSQPTKYEWLLSVPGAWRLLLHASKALIGRYYAback to top mRNA from alignment at P-littoralis_Contig1423:7617..8366+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1423.3.1 ID=mRNA_P-littoralis_Contig1423.3.1|Name=mRNA_P-littoralis_Contig1423.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=750bp|location=Sequence derived from alignment at P-littoralis_Contig1423:7617..8366+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1423:7617..8366+ >mRNA_P-littoralis_Contig1423.3.1 ID=mRNA_P-littoralis_Contig1423.3.1|Name=mRNA_P-littoralis_Contig1423.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=750bp|location=Sequence derived from alignment at P-littoralis_Contig1423:7617..8366+ (Pylaiella littoralis U1_48)back to top |