mRNA_P-littoralis_Contig142.41.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 179 bits (455), Expect = 1.540e-49 Identity = 82/108 (75.93%), Postives = 98/108 (90.74%), Query Frame = 1
Query: 175 YSGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPR 498
+SGNFGRSEYAR+ GLDK+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R
Sbjct: 548 WSGNFGRSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQR 655
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 157 bits (396), Expect = 5.630e-45 Identity = 75/112 (66.96%), Postives = 88/112 (78.57%), Query Frame = 1
Query: 163 CTCIYSGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPR 498
C I++GNFGRS+YARK GLDK GY SADDSKLE LMDILRFF++WR +LE + T+GD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ D P ++N R
Sbjct: 31 CVRIHAGNFGRSDYARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLR 140
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 149 bits (375), Expect = 2.040e-38 Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 184 NFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPRH 501
NFGRS+YARK GLDK YI SADDSKLEE+MDIL F++WR +LE + T+GD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ D P ++N R+
Sbjct: 428 NFGRSDYARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRY 533
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 120 bits (302), Expect = 6.170e-32 Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 181 GNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFV 414
GNFGRS+YARK GLDK GYI SADDSKLEELMDILRFF++WR +LE + T+G WK +FIT++SWTDIRV ILG V
Sbjct: 24 GNFGRSDYARKNGLDKMVGYIRSADDSKLEELMDILRFFDEWRASLEARPTLGGRAWKAYFITDHSWTDIRVCILGTV 101
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Match: A0A6H5JZW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW9_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.090e-28 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 235 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVS 462
GYI S DDSKL+ELMDIL FF++WR +LE + T+GD WK HFIT++ WTD RV ILG V MCRYL E DSRFK+S
Sbjct: 3 GYIRSTDDSKLDELMDILWFFDEWRASLEARPTLGDGAWKAHFITDHLWTDSRVCILGTVRMCRYLIEKDSRFKIS 78
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.930e-26 Identity = 57/118 (48.31%), Postives = 80/118 (67.80%), Query Frame = 1
Query: 172 IYSGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEK---TTVGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKV-SRPRDTPRYVNPRHHCQ 510
I++GN+GRS+ RK G K G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ S + R+++PR+ Q
Sbjct: 62 IFNGNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQ 179
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.730e-21 Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 1
Query: 172 IYSGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 444
I +G +G +E RK+G +K+ GYIT AD L L++IL FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+
Sbjct: 471 IMNGVYGLNEVERKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDE 559
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Match: A0A6H5JNK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK0_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 2.190e-19 Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 1
Query: 235 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVS 417
GYI SAD SKLE LMDILRFF++WR +LE + T+GD TW+ HFIT++SWTDI+V ILG V+
Sbjct: 3 GYIRSADRSKLE-LMDILRFFDEWRASLEARPTLGDGTWEAHFITDHSWTDIQVCILGTVA 62
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Match: A0A6H5K095_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K095_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 1.860e-15 Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 1
Query: 232 AGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYS 378
AGYI SADDSKLEELMDILRF +WR +LE ++T+GD WK HFIT++S
Sbjct: 2 AGYIRSADDSKLEELMDILRFLGEWRASLEARSTLGDCAWKAHFITDHS 50
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 56.2 bits (134), Expect = 4.070e-6 Identity = 30/86 (34.88%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 187 FGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 444
+ R K +D + ITS D L+ L++IL +F+ W +L D+ F+ + +W D+R++ILGFV+M RY+F DD
Sbjct: 493 YNRDPIDVSKRIDIRKSCITSKDSPLLDRLLEILEWFDTWWQDLN-LFGGSDLALDDLFLPDQTWDDLRLTILGFVAMTRYVFGDD 577 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig142.41.1 >prot_P-littoralis_Contig142.41.1 ID=prot_P-littoralis_Contig142.41.1|Name=mRNA_P-littoralis_Contig142.41.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=170bp STYLDEAITNIVSRPNAIEQKGEHGPTCFFLYISSRNVHTLCASFVSSHTback to top mRNA from alignment at P-littoralis_Contig142:72022..72532+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig142.41.1 ID=mRNA_P-littoralis_Contig142.41.1|Name=mRNA_P-littoralis_Contig142.41.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=511bp|location=Sequence derived from alignment at P-littoralis_Contig142:72022..72532+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig142:72022..72532+ >mRNA_P-littoralis_Contig142.41.1 ID=mRNA_P-littoralis_Contig142.41.1|Name=mRNA_P-littoralis_Contig142.41.1|organism=Pylaiella littoralis U1_48|type=CDS|length=510bp|location=Sequence derived from alignment at P-littoralis_Contig142:72022..72532+ (Pylaiella littoralis U1_48)back to top |