mRNA_P-littoralis_Contig142.29.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Match: D7G718_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G718_ECTSI) HSP 1 Score: 386 bits (991), Expect = 6.820e-130 Identity = 180/208 (86.54%), Postives = 193/208 (92.79%), Query Frame = 1
Query: 1 MAKAGEGLFKKYIPKDIHEKIRNVFEFKPKDPSRGWQVPPANAAPPGLSATKQYRTPAPNSQPQANVPVSDNPDLLYDIAYYKRDTRRAKRETYSYVAPSLRMLADERAKALELISNDLGPDDPKPSQGNKNPAVMKYDPTGLRTTMSTTNDAWEKSLQEYMPTHNVKPWWWHSGVDHVAEAQAKGLPPPPGRRMDWEAPKASKVASW 624
MAKAGEGLFKKYIPKDIHEKIRNV EFKPKDP+RGWQVPPA AA PGL A +YRTPAPNSQPQANVPVSDNPDL YDI Y+KRDTRRA R+ +SYVAPSLRMLADER KALELISN+LGP+DP PSQGNKNPAV+KYDPTGLR+TMS TN+AW +SL+EYMPTHNVKPWWWHS VDHVAEAQAKGLPPPPGRRMDWEAPK+SKVASW
Sbjct: 1 MAKAGEGLFKKYIPKDIHEKIRNVLEFKPKDPNRGWQVPPAKAATPGLKAKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYFKRDTRRAPRQIHSYVAPSLRMLADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNEAWTESLKEYMPTHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDWEAPKSSKVASW 208
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Match: W7TSB3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSB3_9STRA) HSP 1 Score: 143 bits (361), Expect = 3.570e-36 Identity = 78/196 (39.80%), Postives = 107/196 (54.59%), Query Frame = 1
Query: 37 IPKDIHEKIRNVFEFKPKDPSRGWQVPPANAAPPGLSATKQYRTPAPNSQPQANVPVSDNPDLLYDIAYYKRDTRRAKRETYSYVAPSLRMLADERAKALELISNDLGPDDPKPSQGNKNPAVMKYDPTGLRTTMSTTNDAWEKSLQEYMPTHNVKPWWWHSGVDHVAEAQAKGLPPPPGRRMDWEAPKASKVASW 624
+PKD+ KIR+ F+P D + + P + PG+ K YR PAP S+P+ NVP S++ D LYDI Y+ DTRR E +S+ R+ + + +L+ S GNKNPAV+ YDPTGLR+ MS TN EK+L MP HNV+ W V + +AKGLP PPG+R + P + W
Sbjct: 25 LPKDMQTKIRSWALFRPDDINDLYPFPRNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAKLMG----------SPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKFAVPAMATQRRW 210
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Match: A0A8K1C7T1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7T1_PYTOL) HSP 1 Score: 125 bits (315), Expect = 7.030e-30 Identity = 76/198 (38.38%), Postives = 111/198 (56.06%), Query Frame = 1
Query: 37 IPKDIHEKIRNVFEF-KPKDPSRGWQVPPANAAPPGLSATKQYRTPAPNSQP-QANVPVSDNPDLLYDIAYYKRDTRRAKRETYSYVAPSLRMLADERAKALELISNDLGPDDPKPSQGNKNPAVMKYDPTGLRTTMSTTNDAWEKSLQEYMPTHNVKPWWWHSGVDHVAEAQAKGLPPPPGRRMDWEAPKASKVASW 624
+P + +K+R + F + S+ Q+P +A ++YR P+P SQP A+VP SD + +Y+I YY RD RR T + PSL + E AK E +S S GNKNPAV+ YDPTG R+ MSTT++A +K + + M THNV+ W + + E +AKG+PP PGR +W+ P ++V W
Sbjct: 16 LPPQLRQKLRELLVFTEATGSSQPGQIP---------TAEQKYRYPSPTSQPGSAHVPSSDGKERVYNIQYYTRDIRRMPFPTEVGMHPSLGYV--EPAKLPEGVSRG--------SPGNKNPAVLAYDPTGTRSAMSTTHEARDKLIIQNMSTHNVRMAWEAQEEEILKECEAKGIPPVPGRPFEWDMPDVARVNRW 194
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Match: D0NT33_PHYIT (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0NT33_PHYIT) HSP 1 Score: 113 bits (283), Expect = 2.170e-25 Identity = 70/202 (34.65%), Postives = 109/202 (53.96%), Query Frame = 1
Query: 25 FKKYIPKDIHEKIRNVFEFKPKDPSRGWQVPPANAAPPGLSATKQYRTPAPNSQPQA-NVPVSDNPDLLYDIAYYKRDTRRAKRETYSYVAPSLRMLADERAKALELISNDLGPDDPKPSQGNKNPAVMKYDPTGLRTTMSTTNDAWEKSLQEYMPTHNVKPWWWHSGVDHVAE-AQAKGLPPPPGRRMDWEAPKASKVASW 624
++ +P ++ K+R + F ++ PA ++ YR P+P+ Q + +VP SD+ D +Y+I YY RD RR T + PS+ M ++RA ++ D + S GNKNPAV++YDPTG R+ MSTT++A +K + ++ THNV+ W + E +AK LPP PGR W+ P S+V W
Sbjct: 15 YQNLLPAELRNKLRKMLVFTEATGTKQVHQSPA--------VSQGYRYPSPDKQAEGVSVPSSDSKDSIYNIQYYTRDIRRFPFPTEVGMHPSIPM--EKRA--------EIPADAKRGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKEILEDLEAKNLPPTPGRPFVWDFPAQSRVMRW 198
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Match: A0A0P1AK58_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK58_PLAHL) HSP 1 Score: 113 bits (282), Expect = 2.980e-25 Identity = 72/202 (35.64%), Postives = 107/202 (52.97%), Query Frame = 1
Query: 25 FKKYIPKDIHEKIRNVFEFKPKDPSRGWQVPPANAAPPGLSATKQYRTPAPNSQPQAN-VPVSDNPDLLYDIAYYKRDTRRAKRETYSYVAPSLRMLADERAKALELISNDLGPDDPKPSQGNKNPAVMKYDPTGLRTTMSTTNDAWEKSLQEYMPTHNVKPWWWHSGVDHVAE-AQAKGLPPPPGRRMDWEAPKASKVASW 624
++K +P ++ K+R + F ++ PA ++ YR P+P+ Q + VP SD+ D +Y+I YY RD RR + PSL + K +E+ + D + S GNKNPAV+ YDPTG R+ MSTT++A +K +Q+++ THNV+ W D + E AK LPP PGR W P S+V W
Sbjct: 15 YQKLLPAELRNKLRKLLVFTEATGTKQLNQSPA--------FSQGYRYPSPDKQAEGVFVPSSDSKDSIYNINYYTRDIRRFPFPIEVGMHPSLPI-----EKRVEIPA-----DAKRGSPGNKNPAVLSYDPTGTRSAMSTTHEARDKLIQQHVSTHNVRFEWEGDAEDEILEDCIAKNLPPAPGRPFVWNFPSQSRVMRW 198
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Match: A0A835YW15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW15_9STRA) HSP 1 Score: 113 bits (282), Expect = 3.860e-25 Identity = 73/196 (37.24%), Postives = 99/196 (50.51%), Query Frame = 1
Query: 40 PKDIHEKIRNVFEFKPKDPSRGWQVPPANAAPPGLSATKQYRTPAPNSQPQANVPVSDNP-DLLYDIAYYKRDTRRAKRETYSYVAPSLRMLADERAKALELISNDLGPDDPKPSQGNKNPAVMKYDPTGLRTTMSTTNDAWEKSLQEYMPTHNVKPWWWHSGVDHVAEAQAKGLPPPPGRRMDWEAPKASKVASW 624
P +I +K V F+PK QVPPAN PG+ YR PAP S+ NVP D P D YDI Y RD R K + ++ P ++ + + + P K S GNKNPAV++YDPTGLR+TMS T +KSL+ + P H + W + +A+ GLPPP GR + + + A W
Sbjct: 16 PDEIVDKAIGVLSFRPKVLEM-LQVPPANMRIPGVPRILGYRYPAPASREAPNVP--DMPADRHYDITRYPRDNRNIKPDNVVFMPPRVKAYLETGSDVTHPLLGAGEPQPKKGSPGNKNPAVLRYDPTGLRSTMSATWAETDKSLELHRPHHLPRAEWVEDYDKMLKKAEENGLPPPIGRPLRMRYQRIIRTAHW 208
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Match: A0A024FXX7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FXX7_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.990e-24 Identity = 73/200 (36.50%), Postives = 107/200 (53.50%), Query Frame = 1
Query: 37 IPKDIHEKIRNVFEFKPKDPSRGWQVPPANAAPPGLSATKQYRTPAPNSQPQ-ANVPVSDNPDLLYDIAYYKRDTRRAKRETYSY-VAPSLRMLADERAKALELISNDLGPDDPKPSQGNKNPAVMKYDPTGLRTTMSTTNDAWEKSLQEYMPT--HNVKPWWWHSGVDHVAEAQAKGLPPPPGRRMDWEAPKASKVASW 624
+P + +++R V FK + G P +N SA ++YR P+P+SQP+ +VP N + +Y+I YY RDTRR + ++ + PS+ + K +EL PK S GNKNPAV+ YDPTG R+ MSTT+ A + LQ + T HNV W + + + + K LPP PGR W P +S+ W
Sbjct: 17 LPDTVRQRLREVLLFKV---ASGCDQPQSNP-----SAEQKYREPSPSSQPKDVHVPSYPNKESVYNIQYYTRDTRRNLAKEFAVEMHPSIPI-----KKIVELPEGA-----PKGSPGNKNPAVLGYDPTGTRSAMSTTHAAMNQLLQRQVETNPHNVHYEWEPFQEEIIRDFEEKNLPPIPGRPCQWHVPTSSRQEDW 198
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Match: A0A225X2X0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2X0_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.730e-24 Identity = 68/202 (33.66%), Postives = 105/202 (51.98%), Query Frame = 1
Query: 25 FKKYIPKDIHEKIRNVFEFKPKDPSRGWQVPPANAAPPGLSATKQYRTPAPNSQPQAN-VPVSDNPDLLYDIAYYKRDTRRAKRETYSYVAPSLRMLADERAKALELISNDLGPDDPKPSQGNKNPAVMKYDPTGLRTTMSTTNDAWEKSLQEYMPTHNVKPWWWHSGVDHVAE-AQAKGLPPPPGRRMDWEAPKASKVASW 624
++K +P D+ +K+R + F ++ PA ++ YR P+P+ Q + VP +++ D +Y+I YY RD RR T + PS+ + A D + S GNKNPAV++YDPTG R+ MSTT++A +K + ++ THNV+ W + E +AK LPP PGR W+ P S+V W
Sbjct: 15 YQKLLPADLRDKLRKMLVFTEATGTKQVNQSPA--------VSQGYRYPSPDKQAEGVFVPSNESKDSVYNIQYYTRDIRRFPFPTEVGMHPSIPVETPAEIPA----------DAKRGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLIMQHASTHNVRFEWEGEAEKEILEDLEAKSLPPTPGRPFVWDFPAQSRVMRW 198
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Match: W2QS79_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QS79_PHYPN) HSP 1 Score: 112 bits (279), Expect = 3.450e-24 Identity = 68/202 (33.66%), Postives = 111/202 (54.95%), Query Frame = 1
Query: 25 FKKYIPKDIHEKIRNVFEFKPKDPSRGWQVPPANAAPPGLSATKQYRTPAPNSQPQA-NVPVSDNPDLLYDIAYYKRDTRRAKRETYSYVAPSLRMLADERAKALELISNDLGPDDPKPSQGNKNPAVMKYDPTGLRTTMSTTNDAWEKSLQEYMPTHNVK-PWWWHSGVDHVAEAQAKGLPPPPGRRMDWEAPKASKVASW 624
++ +P ++ K+R + F ++ PA ++ YR P+P+ Q + +VP SD+ + +Y+I YY RD RR T + PS+ + ++RA ++ D + S GNKNPAV++YDPTG R+ MSTT++A +K + ++ THNV+ W + D + + +AK LPP PGR W+ P S+V W
Sbjct: 77 YQNLLPAELRNKLRKMLVFTEATGTKQVNQSPA--------VSQGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFPTEVGMHPSIPV--EKRA--------EIPADAKRGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPSQSRVMRW 260
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Match: M4BYT1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYT1_HYAAE) HSP 1 Score: 108 bits (271), Expect = 9.650e-24 Identity = 71/202 (35.15%), Postives = 106/202 (52.48%), Query Frame = 1
Query: 25 FKKYIPKDIHEKIRNVFEFKPKDPSRGWQVPPANAAPPGLSATKQYRTPAPNSQPQAN-VPVSDNPDLLYDIAYYKRDTRRAKRETYSYVAPSLRMLADERAKALELISNDLGPDDPKPSQGNKNPAVMKYDPTGLRTTMSTTNDAWEKSLQEYMPTHNVK-PWWWHSGVDHVAEAQAKGLPPPPGRRMDWEAPKASKVASW 624
++K +P+ + K+R V F ++ PA ++ YR P+P+ Q + VP SD+ D +Y+I YY RD RR + PSL + ++RA ++ D + S GNKNPAV+ YDP+G R M+TT++A +K L +++ THNV W + D V +AK LPP PGR W P S+V W
Sbjct: 15 YQKLLPEALRNKLRKVLVFTEATGTKQVNQSPA--------MSQGYRYPSPDKQAEGVFVPTSDSKDSIYNIQYYTRDIRRLPFPLEVGMHPSLPV--EKRA--------EIPADAKRGSPGNKNPAVLSYDPSGTRAAMTTTHEARDKLLLQHVSTHNVHFEWEGDAEKDIVENNEAKNLPPTPGRPFVWNFPAQSRVMRW 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.29.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig142.29.2 >prot_P-littoralis_Contig142.29.2 ID=prot_P-littoralis_Contig142.29.2|Name=mRNA_P-littoralis_Contig142.29.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=209bp MAKAGEGLFKKYIPKDIHEKIRNVFEFKPKDPSRGWQVPPANAAPPGLSAback to top mRNA from alignment at P-littoralis_Contig142:59882..67794- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig142.29.2 ID=mRNA_P-littoralis_Contig142.29.2|Name=mRNA_P-littoralis_Contig142.29.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7913bp|location=Sequence derived from alignment at P-littoralis_Contig142:59882..67794- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig142:59882..67794- >mRNA_P-littoralis_Contig142.29.2 ID=mRNA_P-littoralis_Contig142.29.2|Name=mRNA_P-littoralis_Contig142.29.2|organism=Pylaiella littoralis U1_48|type=CDS|length=627bp|location=Sequence derived from alignment at P-littoralis_Contig142:59882..67794- (Pylaiella littoralis U1_48)back to top |