mRNA_P-littoralis_Contig142.18.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Match: D7G727_ECTSI (Coatomer subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G727_ECTSI) HSP 1 Score: 874 bits (2259), Expect = 8.360e-309 Identity = 491/551 (89.11%), Postives = 507/551 (92.01%), Query Frame = 2
Query: 155 KMVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEEKVQGKAFELVFAFDEVITTGGHKESISLQQIKTNMEMDSHEERLYNMIQDSKREAAKEEAGRRAKELREKQKEALLRGSTAGGMSGIXXXXXXXXXXXSIGMSGSSMYTEAPDQGSTSSWGQSYGXXXXXXXXXXXX-VPSAGLTSSTPVADTRVSTQGMKLGGASKSKNILETLIKEDHLVSIPSAHKASGGGAEAAVPAAVVAASVNPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDASGLFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHITQEGTLLWTMDLLDQSNRTGSLEFNIASRDPEAFFPITVTFASTQLFCNVQVAGVVNTETEAPIQYGYTASLTADSYTVS 1804
K VVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGG+TE+KV K+FELVFAFDEVITTGGHKE+I+LQQIKTNMEMDSHEERL+ MIQDSKREAAKEEA RRAKELREK KEA LRGS G+ XXXXXXXXXX SGSSMYTEA D G S+ G XXXXXXX VP+AG SSTPVADTRVSTQGMKLGGASKSKN+L++LIKEDHLVSIPSA KAS GG EAAVPAAVVAASV+PVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTD SG FTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPE EGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRH+TQEGTLLWTMDLLDQSNRTGSLEFNIASRD EAFFPITVTFAS QLFC+VQVAGV NTETE+PIQYGYTASLTADSYTVS
Sbjct: 14 KQVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGVTEDKVMSKSFELVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHTMIQDSKREAAKEEADRRAKELREKAKEAQLRGS------GMGXXXXXXXXXXXXXXSGSSMYTEASDYGVASTGGTXXXXXXXXXXASLGLSVPAAGPASSTPVADTRVSTQGMKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAAVVAASVHPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGTFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTGSLEFNIASRDAEAFFPITVTFASNQLFCDVQVAGVTNTETESPIQYGYTASLTADSYTVS 558
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Match: A0A835ZBZ4_9STRA (Coatomer subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBZ4_9STRA) HSP 1 Score: 536 bits (1380), Expect = 1.090e-176 Identity = 320/557 (57.45%), Postives = 402/557 (72.17%), Query Frame = 2
Query: 161 VVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEEKVQGKAFELVFAFDEVITTGGHKESISLQQIKTNMEMDSHEERLYNMIQDSKREAAKEEAGRRAKELREKQKEALLRGSTAGGMSGIXXXXXXXXXXXSIGMSGSSMYTEAPDQGSTSSWGQSYGXXXXXXXXXXXXVPSAGLTSSTPVADTRVSTQGMKLG---GASKSKN-ILETLIKEDHLVSIPSAHKASGGGAEAAVP---AAVVAASVNPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDA--SGLFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVR-PMELHDVRISIPLGSSAVPE--IAAIDGSHRHITQEGTLLWTMDLLDQSNRTGSLEFNIASRDPEAFFPITVTFASTQLFCNVQVAGVVNTETEAPIQYGYTASLTADSY 1795
VVLSA+ITT+NGKALLARQ+VDMSRIRIEGLLAAFPKLMGTGNKQHTFIET++VRY+YQP+E LFLLL+TNK SNIVEDLETLRMLSKVVPDVAGG+ E+KV + FELVFAFDEV+T GG +E+I+L Q+K N+EMDSHEERL+NMIQ+SKREAA++EA R+A+E+R++QK G +A M+G XXXXXXXXXXX A D YG P+ +R T+GMKLG G +K +N +L++L+ E+ L +P+A + GGA A +P AA AA+V PVSL +EE+LS LTREGTLE +EVKGTLSLTAN +GA++CK+VLA+ +GL FQTHPKVN+ +YD+++ LA KD KGFPV RPVGVLRWSL T+DE+ PLT+NCWPE EG G + VS+EY L R ELHDV IS+PLG +A P +A G++RH G L+W ++L+D SN +GSLEF + SRD E FFPI + F S+ L+ +QV GVV+ + EAPI +G +SLT +SY
Sbjct: 11 VVLSAAITTKNGKALLARQYVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDSVRYIYQPMETLFLLLITNKGSNIVEDLETLRMLSKVVPDVAGGVAEDKVAARCFELVFAFDEVLTAGGMRETIALPQVKVNLEMDSHEERLHNMIQESKREAARDEAARKAQEMRQRQKALQAAGGSA--MAGXXXXXXXXXXXXXX--------XXAADP---------YGYGTRTA------APAXXXXXXXXXXPSRA-TKGMKLGLGGGTAKGRNAMLDSLMAEEKLAPVPAA---AAGGAPAVLPEVTAAATAAAVYPVSLVMEEKLSAHLTREGTLEQLEVKGTLSLTANDEGASRCKIVLAAGGPVPAGL-AFQTHPKVNRALYDASRALALKDAGKGFPVGRPVGVLRWSLATSDEAAAPLTVNCWPEDEGNGSVAVSLEYALGRGARELHDVVISVPLGGAAAPPRVTSADGGAYRHDAAAGALVWRLELIDNSNASGSLEFTVQSRDTEGFFPIQMQFTSSLLYAQLQVGGVVSIDAEAPIPFGMVSSLTTESY 537
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Match: A0A7S2MQW5_9STRA (Coatomer subunit delta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQW5_9STRA) HSP 1 Score: 504 bits (1297), Expect = 1.780e-164 Identity = 279/552 (50.54%), Postives = 383/552 (69.38%), Query Frame = 2
Query: 158 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEEKVQGKAFELVFAFDEVITTGGHKESISLQQIKTNMEMDSHEERLYNMIQDSKREAAKEEAGRRAKELREKQKEALLRGSTAGGMSGIXXXXXXXXXXXSIGMSGSSMYTEAPDQGSTSSWGQSYGXXXXXXXXXXXXVPSAGLTSSTPVADTRVST--QGMKLGGASKSKNILETLIKEDHLVSIPSAHKASGGGAEAAVPAAVVA-ASVNPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDASGLFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAID-GSHRHITQEGTLLWTMDLLDQSNRTGSLEFNIASRDPEAFFPITVTFASTQLFCNVQVAGVVNTETEAPIQYGYTASLTADSYTV 1801
MVVLSA++ T+NG+ALLARQ+VDM+RIRIEGLLAAFPKLMGTG++QHTF+ET++VRYVYQPIE L+LL++TNKASNIVEDLETLR+LSK+VP++A G+TEEK+ K FELVFAFDEV+T GGH+ESI++ QI+ N+ M+SHEE+L+ MI++SK + KEEA RRAK ++E+Q+ + G ++GGM+G +G G SM P+ T+ S S +P AD T +GMKLGG+SK + I++ + ED+L P + K + +A PA A + +PVSL +EE+++ + REG LE ME+KGT++L AN D +KCKV+LA + LFT+QTHPKV+K Y+ L KD+ KGFP + +G+LRWS+NT D+SQ+P++INCWPE E G MNV++E+ MELH+V+ISIPLG+S PEI ++D GSH+H L+W ++L+D N+T SLEFN+A D +AFFPI+V+F ST L + VA ++++E +APIQ+G L DSY V
Sbjct: 1 MVVLSAAVCTKNGRALLARQYVDMTRIRIEGLLAAFPKLMGTGSQQHTFLETDSVRYVYQPIETLYLLVITNKASNIVEDLETLRLLSKLVPEIAEGVTEEKILDKMFELVFAFDEVLTPGGHRESITMPQIQVNLSMESHEEKLHKMIEESKVSSTKEEADRRAKTIKEQQRSSKAGGMSSGGMAG-------------MGGGGDSMAESVPETDYTTR------PFSELSSGQQTSTSSEWGYSQSPKADPEPVTAKKGMKLGGSSKKQQIMDKFVSEDNLA--PLSAKGNDTSGKAMTPATAAAPVATHPVSLLLEEKVAVTMNREGALELMEIKGTMALVANGDEFSKCKVILAGAK-NPLFTYQTHPKVDKKAYEKENILCLKDKNKGFPKGK-LGILRWSMNTQDDSQVPISINCWPEDEDGN-MNVNVEFNAEGDMELHNVQISIPLGTSNPPEIVSMDTGSHKHNRTNEVLIWDIELIDGQNKTSSLEFNVAQDDADAFFPISVSFGSTHLKAGLDVANILSSENDAPIQFGLAKMLVTDSYQV 528
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Match: F0YG49_AURAN (Coatomer subunit delta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG49_AURAN) HSP 1 Score: 499 bits (1286), Expect = 4.820e-163 Identity = 275/550 (50.00%), Postives = 372/550 (67.64%), Query Frame = 2
Query: 158 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEEKVQGKAFELVFAFDEVITTGGHKESISLQQIKTNMEMDSHEERLYNMIQDSKREAAKEEAGRRAKELREKQKEALLRGSTAGGMSGIXXXXXXXXXXXSIGMSGSSMYTEAPDQGSTSSWGQS-YGXXXXXXXXXXXXVPSAGLTSSTPVADTRVSTQGMKLGGASKSKNILETLIKEDHLVSIPSAHKASGGGAEAAVPAAVVAASVNPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDASGLFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHITQEGTLLWTMDLLDQSNRTGSLEFNIASRDPEAFFPITVTFASTQLFCNVQVAGVVNTETEAPIQYGYTASLTADSYTVS 1804
MVVLSAS+ T+NG+ L ARQFV+M+R+R+EGLLAAFPKLMGTGNKQHTFIET++VRYV+QP+E+++LLL+TNKASNIVEDLETLR+LSKVVP++AGG +EEK+ KAF+LVFAFDEVITTGG++E+I L+QI+TN+EMDSHEE+L+NM++ +K ++AK++A +K ++ +Q+EA G G G G G M AP G S +G+S YG + P + V + MKLGG ++++ + ED +SI A S + + P+SL VEE+L+ L++EG LES ++KGTLSLTAN +GA CKV +A A+ TFQ HPKV+K +++ + KD +KGFPV RPVGV+RWSL+TTDE+ +PLTINCWPE EG G MNV++EYEL RPMEL+DV I IP G PEI ++DGSH H +E L W +D++D SN+ G+LEFNI +RD + FFPI VTF S L+ + +A V + +AP+ Y +LT DS+ ++
Sbjct: 1 MVVLSASVCTKNGRCLFARQFVEMNRLRVEGLLAAFPKLMGTGNKQHTFIETDSVRYVWQPVESIYLLLITNKASNIVEDLETLRLLSKVVPEIAGGHSEEKLSDKAFDLVFAFDEVITTGGYREAIDLRQIRTNLEMDSHEEKLHNMVKKTKMDSAKDQAAHMSKVIKSRQREASKSGDDPYGGGG--------------GDFGGGMGMPAPPMGGESPYGESPYG-------------------APAPPPEPVVQVKSMKLGGKKNKSSLMDKMAAEDG-ISIAPAFTPSKPASXXXXXXXXXXXAAQPISLIVEEKLTVALSQEGALESFDLKGTLSLTANDEGAALCKVQIADKAAAPGTTFQVHPKVSKKDWEADGAVMMKDASKGFPVGRPVGVVRWSLSTTDEALVPLTINCWPEDEGDGVMNVNVEYELKRPMELYDVVIRIP-GCGNAPEIVSVDGSHTHDAKEEVLDWKLDMVDGSNKQGTLEFNINARDADDFFPIAVTFRSKSLYYDAPIASVTAIDGDAPVAYSLNKALTVDSFRIA 515
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Match: A0A4D9DAV0_9STRA (Coatomer subunit delta n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAV0_9STRA) HSP 1 Score: 501 bits (1289), Expect = 5.060e-163 Identity = 294/566 (51.94%), Postives = 393/566 (69.43%), Query Frame = 2
Query: 158 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGN-KQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEEKVQGKAFELVFAFDEVITTGGHKESISLQQIKTNMEMDSHEERLYNMIQDSKREAAKEEAGRRAKELREKQKEALLR---GSTAGGMSGIXXXXXXXXXXXSIGMSGSSM-YTEAPDQGSTSSWGQSYGXXXXXXXXXXXXVPSAGLTSSTPVADT---RVSTQGMKLGGASKSKNILETLIKEDHLVSIPSAH----KASGGGAEAAVPAAVVAASVNPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDA----SGLFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELV-RPMELHDVRISIPLGSSAVPEIAAIDGSHRHITQEGTLLWTMDLLDQSNRTGSLEFNIASRDPEAFFPITVTFASTQLFCNVQVAGVVNTET-EAPIQYGYTASLTADSYTV 1801
MVVLS +I T+NGKALL+RQFV+MSRIRIEGLLAAFPKL+G+G KQHTFIET+TVRYVYQPI+NLFLLL+TNKASNIVEDLETLR+LSK+VPDVAGG+TEE+V K FELVFAFDEV+TTGG++ES++LQQIKTNMEMDSHEE+L MI+ SK ++AK++A R+AK ++E+ +E L R G+T G+ G G+ G M Y G + ++ G V + S V+ T + ++GMKLG SK+ ++L++L++ED+L +I + A G E AV A V+ P+ L+VEE++ LTR+G +++ EVKG+L+LTA ++ A KV LA+ A +GL FQTHPKVNK YDS + L KD +KGFPV R VGVLRWS ++TD+S +P+T+NCWPE EG G+MN+S+EY++ + ELH+V +SIPLG++ PE+A+IDG++RH +E L+W MDL+D SN +G+LEF +A RD + FFPI V+F+S L+ +V V V E API Y T L+ DSY V
Sbjct: 1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETDTVRYVYQPIDNLFLLLITNKASNIVEDLETLRLLSKIVPDVAGGVTEERVSDKCFELVFAFDEVLTTGGYRESVTLQQIKTNMEMDSHEEKLALMIKQSKMDSAKDQAARQAKAIKERLRE-LARDRLGATRSGLGGAYQ-----------GIGGGGMDYV-----GGSGAFDGQAGIGQDAFGASTPSVYAPSTVDSFTVSKTETVKTVSKGMKLGAPSKAASMLDSLVQEDNLSNIAATRAPPLSAGAGLGEEAVSAPVI--QHQPIQLAVEEKIVAHLTRDGAIDTFEVKGSLTLTATTEAAALSKVALAAGGARPVPAGL-NFQTHPKVNKQEYDSNRVLVLKDTSKGFPVGRAVGVLRWSYSSTDDSVVPITLNCWPEEEGQGKMNISIEYQMNGQSQELHNVNVSIPLGTAEPPEVASIDGTYRHDPREQRLIWHMDLVDASNSSGALEFVVAGRDAQVFFPIIVSFSSQILYADVNVTAVTGLEDGSAPIPYSLTKLLSPDSYIV 546
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Match: A0A7S3H6H8_9STRA (Coatomer subunit delta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6H8_9STRA) HSP 1 Score: 486 bits (1252), Expect = 1.230e-157 Identity = 282/562 (50.18%), Postives = 377/562 (67.08%), Query Frame = 2
Query: 152 AKMVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQ-HTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAG---GLTEEKVQGKAFELVFAFDEVITTGGHKESISLQQIKTNMEMDSHEERLYNMIQDSKREAAKEEAGRRAKELREKQKEALLRGSTAGGMSGIXXXXXXXXXXXSIGMSGSSMYTEAPDQGSTSSWGQSYGXXXXXXXXXXXXVPSAGLTSSTPVADT----RVSTQGMKLGGA-SKSKNILETLIKEDHLVSIPSAHKASGGGAEAAVPAAVVAASVNPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDA-SGLFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYEL-VRPMELHDVRISIPLGSSAVPEIAAIDGSHRHITQEGTLLWTMDLLDQSNRTGSLEFNIASRDPEAFFPITVTFASTQLFCNVQVAGVVNTETEAPIQYGYTASLTADSYTVS 1804
A MVVLSA++ T+ GKAL+ARQFVD+SRIRIEG+LAAFPKLMGT KQ HTF+ETE VRYVYQ ++NL+LLL+TN+ASNIVEDLETLR+LSKV+P+VAG LTEE V K+FEL+FA DEVITTGG++E I+LQQI+TNMEM+SHEE+L+NMI+ SK E+AK++A A+ +++KQKE + G++ GGM GI G+S + + GS+ VP+A ST A + R +GM L A +K+K++ + L++ED L + SA K S A + AAV PV+LS+ E++S L+REG +E E+KG+L+LTA D A C V L A +F+F THPKVNK Y+ L K+ KGFP ARPVG+L+W+ + T E +PL INCWPE E GQMNVS+EY + V+ +ELHDVRI IPLG++A P I ++DGSH+H G L+WT+DL+D SN TGSLEFN+ R +AFFPI V FAS +L+ V+V V + AP+ YG T +++++ Y ++
Sbjct: 5 ANMVVLSAAVCTKGGKALVARQFVDVSRIRIEGMLAAFPKLMGTDAKQQHTFVETEAVRYVYQLLDNLYLLLITNRASNIVEDLETLRLLSKVIPNVAGVMTNLTEEHVADKSFELMFALDEVITTGGYREPINLQQIRTNMEMESHEEKLHNMIKISKMESAKDQASVAARAIKDKQKEQMRMGASGGGMVGIGSNSRSEF--------GASGFDSSAHSGSS----------------FADPVPAASSPVSTAQASSSSRARQPVKGMSLNPAGAKNKSVEDALMREDKLAPLISASKNSVSDAPTPLTAAVAQ---QPVTLSIVEKVSATLSREGLVEMFEIKGSLTLTAADDEAALCSVQLKPASARDSVFSFNTHPKVNKAAYEKTGLLQLKEANKGFPSARPVGILKWTHSGTSEELVPLKINCWPEEESRGQMNVSIEYSMDVKGLELHDVRIVIPLGTNAAPTIVSVDGSHKHNASSGELVWTIDLIDASNTTGSLEFNVQQRSADAFFPIGVHFASPKLYSGVEVVSVNAGGSGAPVVYGLTKNMSSEEYVIN 539
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Match: A0A7S2RJQ4_9STRA (Coatomer subunit delta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJQ4_9STRA) HSP 1 Score: 471 bits (1211), Expect = 2.780e-151 Identity = 276/572 (48.25%), Postives = 381/572 (66.61%), Query Frame = 2
Query: 143 PLDAKMVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTG--NKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEEKVQGKAFELVFAFDEVITTGGHKESISLQQIKTNMEMDSHEERLYNMIQDSKREAAKEEAGRRAKELREKQKEALLRGSTAGGMSGIXXXXXXXXXXXSIGMS---------GSSMYTEAPDQGSTSSWGQSYGXXXXXXXXXXXXVPSAGLTSSTPVADTRV-STQGMKLGGASKSKNILETLIKEDHLVSIPSAHKASGGGAE-----AAVPAAVVAASVNPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDASGLFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRP-MELHDVRISIPLGSSAVPEIAAID-GSHRHITQEGTLLWTMDLLDQSNRTGSLEFNIASRDPEAFFPITVTFASTQLFCNVQVAGVVNTETEAPIQYGYTASLTADSYTV 1801
P + MVVLSAS+ T+NGKAL+ARQFV MSRIRIEGLLAAFPKL+G+ N QHTFIET++VRYVYQPIENLFLL++TNKASNIVEDLETLR+LSK+VP+ GGLTE+K+ K F+L+FAFDEVITTGGH+ESI+LQQI+ N+ M+SHEE+L+ MI+ SK +AKEEA R+AK L+E++++ L G+T+ MSGI MS GS+MY + S++S+G G++S T D V +GM+LGG SK + +++ L+ ED+L +PSA + A PA V +P+++ +EE+++ L REG +ES+E KGT+ LT+N+ A +C+V++ + LF +QT+PKV+K Y+ +A KD +KGFP + VGVLRWS T D+ +P++INCWPE E G MNV++EY + RP +ELH+V I IPLG+SA P + ++D G+HRH L+W ++L+D+SN++ SLEF++ R +AFFPI V FAS QL V VA + + E + PI + S A+SY V
Sbjct: 14 PSTSAMVVLSASVCTKNGKALVARQFVGMSRIRIEGLLAAFPKLVGSEAKNTQHTFIETDSVRYVYQPIENLFLLIITNKASNIVEDLETLRLLSKLVPETCGGLTEDKITDKMFDLIFAFDEVITTGGHRESITLQQIQVNVSMESHEEKLHKMIEQSKVSSAKEEADRKAKALQEQRRQDKLSGATS--MSGIEGGSTGEDTFAERHMSSGGFSSAPPGSAMYADHAPLPSSASYG--------------------GVSSPTSRRDEPVLPKKGMQLGGGSKKQQLMDKLVTEDNLTPLPSAASTAXXXXXXXXXXVATPAVEV---THPINILLEEKITGALNREGAVESLETKGTMFLTSNTAEACRCQVIMTPAK-NPLFAYQTNPKVDKKAYEQEHRIALKDASKGFPQGKGVGVLRWSAATQDDEHVPISINCWPE-EDGADMNVNVEYSVDRPGLELHNVSIVIPLGTSASPNVLSVDSGTHRHNRSSEELVWEIELIDESNKSASLEFSVPQRSSDAFFPIQVRFASNQLSAGVDVANITDLEGK-PIHFSLQKSAVAESYKV 557
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Match: A0A7S3ZRB7_9STRA (Coatomer subunit delta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRB7_9STRA) HSP 1 Score: 466 bits (1199), Expect = 5.640e-150 Identity = 274/554 (49.46%), Postives = 377/554 (68.05%), Query Frame = 2
Query: 158 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEEKVQGKAFELVFAFDEVITTGGHKESISLQQIKTNMEMDSHEERLYNMIQDSKREAAKEEAGRRAKELREKQKEALLRGSTAGGMSGIXXXXXXXXXXXSIGMSGSSMYTEAPDQGSTSSWGQSYGXXXXXXXXXXXXVPSAGLTSSTPVADTRVSTQGMKLGGASKSK-NILETLIKEDHL---VSIPSAHKASGGGAEAAVPAAVVAASVNPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDASGLFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRP-MELHDVRISIPLGSSAVPEIAAIDGSHRHITQEGTLLWTMDLLDQSNRTGSLEFNIASRDPEAFFPITVTFASTQLFCNVQVAGVVNTETEAPIQYGYTASLTADSYTVS 1804
MV+LSA++TT+NG+ALL+RQFVDM+R+R+EGLLAAFPKL GTGNKQHTF+ET++VRYVYQP+E++FLLL+TNKASNIVEDLETLR+LSKVVP++AGG +E+KV AFELVFAFDEVITTGG++E+I ++ I+ N++MDSHEE+L NM++ SK +AAK++A ++ ++++Q++A+ G GG GM G M + D+ + XXXXXXXXXXX + + + P + + QGMKLG K K +++ + ED L S+P A A A+ P++LSVEE+L+ L++EG LE+ ++KGTLSLTAN D A C++ +A A+ TF THPKV+K ++S + K AKGFPV R VGV+RW+L+TTDE Q+PLTINCWPE EG GQMNV++EY R MEL+DV I IP G ++ PEI ++DG+H+H + L W +D +D N TG+LEFNIA +D AFFPI V+F S L+ +V ++ V +TE I Y +T DS+ ++
Sbjct: 1 MVILSAAVTTKNGRALLSRQFVDMNRLRVEGLLAAFPKLQGTGNKQHTFVETDSVRYVYQPVESIFLLLITNKASNIVEDLETLRLLSKVVPEIAGGTSEDKVSDHAFELVFAFDEVITTGGYRETIDMRTIRQNLDMDSHEEKLANMVKKSKLDAAKDQAKHMSQVIKQRQRDAMKTGMGGGGPM--------------AGMGGGDM--DEDDEYNX------XXXXXXXXXXXXXFMDAYANPAPPPEPEPIIQVQGMKLGKKKKGKVDLMSKMAAEDGLDVRASMPQEEIAD------APXXXXXXATSQPIALSVEEKLTISLSQEGALEAFDLKGTLSLTANDDVAAACRLTVAHKTAAAGTTFATHPKVDKKAWESDGIVQMKGNAKGFPVGRAVGVVRWALSTTDEQQVPLTINCWPEDEGDGQMNVNIEYTAARSGMELYDVSIKIP-GCASNPEIVSVDGTHQHDARSEILDWQLDCIDSGNPTGTLEFNIAQKDEGAFFPIEVSFRSKSLYYDVPISSVESTEGHGSIGYSLDKKVTVDSFRIA 525
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Match: A0A1V9ZC55_9STRA (Coatomer subunit delta n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC55_9STRA) HSP 1 Score: 441 bits (1135), Expect = 1.820e-136 Identity = 246/549 (44.81%), Postives = 356/549 (64.85%), Query Frame = 2
Query: 158 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEEKVQGKAFELVFAFDEVITTGGHKESISLQQIKTNMEMDSHEERLYNMIQDSKREAAKEEAGRRAKELREKQKEALLRGSTAGGMSGIXXXXXXXXXXXSIGMSGSSMYTEAPDQGSTSSWGQSYGXXXXXXXXXXXXVPSAGLTSSTPVADTRVSTQGMKLGGASKSKNILETLIKEDHLVSIPS-AHKASGGGAEAAVPAAVVAASVNPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDASGLFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHITQEGTLLWTMDLLDQSNRTGSLEFNIASRDPEAFFPITVTFASTQLFCNVQVAGVVNTETEAPIQYGYTASLTADSYTV 1801
MVVLSA++ +NGK ++ARQFV++SRIR+EGLL AFPKL+ + ++QHTFI+TE+VRYVYQPIE+ FLLL+TNK SNIVEDL T+++++K+VPD+ G LTE ++ K F+LVF FDE++T GGH E+I+LQQI+TNMEM+SHEE+L+ MIQ +K+E A + R+ + ++E+Q+E AG S S SS +T S++S+ P +SS+ T GMKLGG+ + L+ + ED L IP A A+ A A P A S PV +++EE+LS L R+G +E +EVKG+L + N ++ C++ L ++A+G+ FQTHPKV+K +++S LA KD +K FP +R V VLRW++ T DES +PL I CWPE EG G+M VS+EY + R M L +V I IPLG++ +P+I+ IDG +RH EG+LLW +D +D SN +GSLEF+I + +AFFPI V+F S ++C++ V V+ T +P++YG+ ++ DSY +
Sbjct: 312 MVVLSAALLAKNGKVMVARQFVEVSRIRLEGLLTAFPKLLASESRQHTFIDTESVRYVYQPIESYFLLLITNKTSNIVEDLHTMQLMAKLVPDICGTLTEAHIREKQFDLVFGFDELLTAGGHSENITLQQIRTNMEMESHEEKLHLMIQKTKQENAIADMKRQQQRIKEEQREKARMEKAAGMTSPFNRNSSYGGFG-----SNSSGFTSPSASSSSNSF---------KAAEPYIEAPKQSSSSSSR-------TSGMKLGGSKPGNSFLDAMAAEDDLKDIPPMAMAAANIPAPTAKPEPAAAVSHEPVGIAIEEKLSVVLNRDGAVEQLEVKGSLFVAGNDPESSVCRLRLRHSNANGI-NFQTHPKVDKKLFESQSILALKDDSKPFPPSR-VAVLRWAIKTQDESFLPLNITCWPEEEGNGKMTVSLEYSMDREMNLENVNIIIPLGANDLPQISHIDGDYRHNPSEGSLLWHLDTIDSSNSSGSLEFSIRGNNLDAFFPIGVSFFSRSIYCDLAVDSVIRTSDGSPVKYGFDQLVSTDSYVI 837
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Match: A0A067CNQ5_SAPPC (Coatomer subunit delta n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNQ5_SAPPC) HSP 1 Score: 429 bits (1102), Expect = 1.400e-135 Identity = 253/558 (45.34%), Postives = 365/558 (65.41%), Query Frame = 2
Query: 158 MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEEKVQGKAFELVFAFDEVITTGGHKESISLQQIKTNMEMDSHEERLYNMIQDSKREAAKEEAGRRAKELREKQKEALLRGSTAGGMSGIXXXXXXXXXXXSIGMSGSSMYTEAPDQGSTSSWGQSYGXXXXXXXXXXXXVPSAGLTSSTP---------VADTRVSTQGMKLGGASKSKNILETLIKEDHLVSIPS-AHKASGGGAEAAVPAAVVAASVNPVSLSVEERLSCQLTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDASGLFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEAEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHITQEGTLLWTMDLLDQSNRTGSLEFNIASRDPEAFFPITVTFASTQLFCNVQVAGVVNTETEAPIQYGYTASLTADSYTV 1801
MVVLSA++ +NGK ++ARQFV++SRIR+EGLL AFPKL+ + ++QHTFI+TE+VRYVYQPIEN FLLL+TNK SNIVEDL T+++++K+VPD+ G LTE ++ K F+LVF FDE++ GGH E+I+L QI+TNMEM+SHEE+L+ MIQ +K+E A + R+ + ++E+Q+E R A GMS +P + SS +G XXXXXXXXXXX S SS P VA ++ T GMKLGG+ + L+ + ED L IP A A+ A +A P A S+ PV +++EE++S L R+G +E +EVKG+L + N + C++ L ++A+G+ FQTHPKV+K ++++ LA KD +K FP +R V VLRW++ T DE+ +PL I CWPE EG G+M VS+EY + R M L +V I IPLG++ +P ++ IDG +RH +G LLW +D + +N +GSLEF+I D +AFFPI+V+F S ++C++ V V+ AP++YG+ ++ D+Y V
Sbjct: 1 MVVLSAALLAKNGKVMVARQFVEVSRIRLEGLLTAFPKLLASESRQHTFIDTESVRYVYQPIENFFLLLITNKTSNIVEDLHTMQLMAKLVPDICGPLTEAHIREKQFDLVFGFDELLNAGGHSENINLAQIRTNMEMESHEEKLHLMIQKTKQENAIADMKRQQQRIKEEQREKA-RMEKAAGMS-------------------------SPFNRNASSAYGGFGSXXXXXXXXXXXXSSNTFKSSEPTYTEAPKLSVATSK--TSGMKLGGSKPGNSFLDAMAAEDDLKEIPPMAMAAASMPAPSAKPEPAAAVSMEPVGIAIEEKISVSLNRDGAVEQLEVKGSLYVAGNDPESAVCRLHLRHSNANGI-NFQTHPKVDKKLFEAQSILALKDDSKPFPPSR-VAVLRWAIKTQDETFLPLNITCWPEEEGNGKMTVSLEYSMDRNMTLENVNIVIPLGATDLPAVSHIDGDYRHNAADGALLWHLDSISGANSSGSLEFSIRGADLDAFFPISVSFFSRSIYCDLSVDSVLRIADSAPVKYGFDQLVSTDAYVV 528 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.18.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig142.18.2 >prot_P-littoralis_Contig142.18.2 ID=prot_P-littoralis_Contig142.18.2|Name=mRNA_P-littoralis_Contig142.18.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=550bp MVVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIback to top mRNA from alignment at P-littoralis_Contig142:19314..29758- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig142.18.2 ID=mRNA_P-littoralis_Contig142.18.2|Name=mRNA_P-littoralis_Contig142.18.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10445bp|location=Sequence derived from alignment at P-littoralis_Contig142:19314..29758- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig142:19314..29758- >mRNA_P-littoralis_Contig142.18.2 ID=mRNA_P-littoralis_Contig142.18.2|Name=mRNA_P-littoralis_Contig142.18.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1650bp|location=Sequence derived from alignment at P-littoralis_Contig142:19314..29758- (Pylaiella littoralis U1_48)back to top |