mRNA_P-littoralis_Contig142.144.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig142.144.1
Unique NamemRNA_P-littoralis_Contig142.144.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Match: D8LTZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ1_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 4.570e-105
Identity = 180/192 (93.75%), Postives = 185/192 (96.35%), Query Frame = 1 
Query:    7 GLDQELVRYRTALKKAKGPTATNIKRRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMADXXXXMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGIEEDTGPSYVAQPASLPQEPSLVPESTGPTGVDEYGLPVGQTPAAPAQE 582
            GLDQELV+YR ALKKAKGPTATNIK+RAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMA XXXX NEINDIMGRSYNVG+ELDEDDLDAELACLDDELDALEG+EEDTGPSYVAQPASLPQEPSLVPESTGPTGVDE+GLPV   PA PAQE
Sbjct:  111 GLDQELVKYRNALKKAKGPTATNIKKRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMAXXXXXXNEINDIMGRSYNVGDELDEDDLDAELACLDDELDALEGLEEDTGPSYVAQPASLPQEPSLVPESTGPTGVDEFGLPVNPAPARPAQE 302
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BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Match: A0A7S2FVB6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVB6_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.140e-56
Identity = 125/197 (63.45%), Postives = 145/197 (73.60%), Query Frame = 1 
Query:    1 IKGLDQELVRYRTALKKAKGPTATNIKRRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMADXXXXMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGIEEDTGPSYVAQPASLPQEPSLVPESTGPT-------GVDEYGLPVGQTPAA 570
            I  LD EL +Y+  LKKAKGPTA NIKRRAMETLKRKKMYE QRDQMAGQ FNIEQT FAIDSIKDT TTVAAMKDA+KTLKA+ KK++I+++ED       XXXX   IND+MGR+Y + +E+DE DLDAELACL+DEL+ LE  E +  PSY+ QPA +P EPS VP             GVD +GLPV   PAA
Sbjct:   61 IAKLDLELRKYKEQLKKAKGPTAANIKRRAMETLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKDAAKTLKAETKKLNIDQIEDTQXXXXXXXXXXXXINDMMGRAYGMPDEVDEADLDAELACLEDELEGLEEGETEAAPSYL-QPAGMPVEPSAVPAGAPAADAAAEADGVDAFGLPVA--PAA 254
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BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Match: A0A7S2AMY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMY1_9STRA)

HSP 1 Score: 196 bits (498), Expect = 5.120e-55
Identity = 116/184 (63.04%), Postives = 136/184 (73.91%), Query Frame = 1 
Query:   52 AKGPTATNIKRRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMADXXXXMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGIEEDTGPSYVAQPASLPQEPSLVPESTGPT--------GVDEYGLPVGQTPAAPAQ 579
            AKGPTA NIKRRAM+TLKRKKMYE QRDQMAGQ FNIEQT FAIDSIKDT TTVAAMK A+ TLKA+ KK++I+ +ED  DD+ D    MNEIN++MGRSY V +E+DE+DLDAELACLDDEL+ +E  EE    SY+  PA LP EPS  P    P+        G+D++GLPV     APAQ
Sbjct:   52 AKGPTAANIKRRAMDTLKRKKMYEQQRDQMAGQAFNIEQTSFAIDSIKDTQTTVAAMKVAASTLKAETKKLNIDSIEDTQDDLGDMMEDMNEINEMMGRSYGVPDEMDEEDLDAELACLDDELEGIEAGEEAEA-SYLG-PAGLPVEPSAEPAGANPSAALPADGGGMDDFGLPV-----APAQ 228
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BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Match: A0A835ZMU4_9STRA (Snf7 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZMU4_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.300e-49
Identity = 110/181 (60.77%), Postives = 134/181 (74.03%), Query Frame = 1 
Query:    1 IKGLDQELVRYRTALKKAKGPTATNIKRRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMADXXXXMNEINDIMGRSYNVGEELDEDDLDAELAC------------LDDELDALEGIEEDTGPSYVA--QPASLPQEPSL 501
            IK LDQEL+R++ AL KAKG  A NIKRRAMETLKRKKMYE QRDQ+AGQQFNIEQT F IDSIKDT TTV AMK A+K +K++ KK++I+++ED  DD+A XXXXMNEINDIMGRSYNVG+E+DE DLDAELAC            +DD+   +        PSY+A  +PA+   + +L
Sbjct:   35 IKVLDQELLRHKHALAKAKGQAAVNIKRRAMETLKRKKMYEAQRDQLAGQQFNIEQTNFTIDSIKDTQTTVQAMKGANKQIKSEFKKMNISEIEDTIDDLAXXXXXMNEINDIMGRSYNVGDEIDEADLDAELACXXXXXXXXXELGIDDDAGGITATAGTARPSYLAPSRPAAAQSQVAL 215
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BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Match: A0A812Y1R2_SYMMI (CHMP5 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y1R2_SYMMI)

HSP 1 Score: 176 bits (447), Expect = 1.140e-47
Identity = 102/195 (52.31%), Postives = 136/195 (69.74%), Query Frame = 1 
Query:    1 IKGLDQELVRYRTALKKAKGPTATNIKRRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMADXXXXMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGIEEDTG---PSYVAQPASLPQEPSL--------VPESTGPTGVDEYGLPV 552
            IK  D EL  Y+T + KAKGP    I+RRA+E LKRKKMYE QRDQ+ GQ FN++Q  FA+++IKDT TTVAAMKDA+K LK +  KID+N++ED+ DD+AD    MNEI++ +GRSY   + +DEDDL+AELACL DE D  E + E+     PSY++ P+ +P  P+          P++  P+GVDE+GLPV
Sbjct:   35 IKAADNELRVYKTQIAKAKGPAKAGIQRRAVEVLKRKKMYEQQRDQLCGQAFNLDQAAFAMETIKDTHTTVAAMKDAAKQLKVEHAKIDLNEIEDLNDDLADMFEDMNEISETLGRSYGTPDYIDEDDLEAELACLGDEFD--EELTEEVSLEQPSYLS-PSGMPHVPAAGLPVPTIAQPQAPQPSGVDEFGLPV 226
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BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Match: F0Y671_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y671_AURAN)

HSP 1 Score: 175 bits (444), Expect = 1.570e-47
Identity = 94/154 (61.04%), Postives = 120/154 (77.92%), Query Frame = 1 
Query:   52 AKGPTATNIKRRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMADXXXXMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGIEEDTGPSYV--AQPASLPQEPSLVP 507
            AKGP A  +K+RAM  LKRKKMYE QRDQ+AGQ FN+EQT FAIDS+KDT TTV AMK ASKTLK + KK+DI+++ED+ DD+AD    MNE+ D +GRSY +G+++DE DLDAELACLDDEL   E   ED+ P+Y+  A P +LP++P+ +P
Sbjct:   52 AKGPAAKTLKQRAMAVLKRKKMYEAQRDQLAGQAFNVEQTSFAIDSVKDTLTTVDAMKAASKTLKTEFKKVDIDQIEDVQDDLADMMEDMNEVQDALGRSYGIGDDVDEADLDAELACLDDELGMDELGLEDSTPAYLQPADPGALPEQPTNLP 205
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BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Match: A0A7S3K2P3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2P3_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.730e-46
Identity = 108/192 (56.25%), Postives = 138/192 (71.88%), Query Frame = 1 
Query:    1 IKGLDQELVRYRTALKKAKGPTATNIKRRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMADXXXXMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDA-LEGIEEDTGPSYV--AQPASLPQEPSL---VPESTGPTGVDEYGLPVGQ 558
            IK L+ EL  Y+  LK+A+GP    +K+RAM  LKRKKMYE QRDQ+AGQ FNIEQT F IDS+KDT TTV AMK ASKTLK + KK++I+K++D+ D    XXXX NE+ D++GRSY+VGE++DE DLDAEL  L D+LDA LE  + D+ P+Y+  A+P +LP+        PES     VDE+GLPV Q
Sbjct:   44 IKKLEVELSGYKEKLKRARGPAQKTLKQRAMGVLKRKKMYEQQRDQLAGQAFNIEQTNFTIDSVKDTITTVDAMKAASKTLKTEFKKVNIDKIDDLQDXXXXXXXXXNEVQDVLGRSYDVGEDIDEADLDAELEALGDDLDAELELDDADSTPAYLQPAEPTNLPEXXXXXXXAPESA----VDEFGLPVAQ 231
[Close]
BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Match: A0A7S4EE62_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EE62_9STRA)

HSP 1 Score: 166 bits (419), Expect = 8.340e-44
Identity = 96/186 (51.61%), Postives = 133/186 (71.51%), Query Frame = 1 
Query:    1 IKGLDQELVRYRTALKKAKGPTATNIKRRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMADXXXXMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGIEEDTGPSYV--AQPASLPQEPSLVPESTGPTGVDEYGLPV 552
            I+ LD EL  Y+  LKKA+G     +KRRAM  L+RK+MYE QRDQ+AGQ FN+EQT FAIDS+KDT TTV AMK ASKTLK ++KK+D++++ED+ DD+A XXXX   + D++G+SY +G+++D+ DLDAEL  L D+ D +   + D  P+Y+  A P+ +P +P+  P       VDE+GLPV
Sbjct:   35 IRKLDIELAGYKEKLKKARGAAQQTLKRRAMGVLRRKRMYEQQRDQLAGQAFNVEQTNFAIDSVKDTLTTVQAMKTASKTLKKEVKKVDLSQIEDLQDDLAXXXXXXXXVQDVLGQSYGIGDDIDDADLDAELDALGDDFDDV--ADADATPAYLQPADPSLMPDQPTDAPVQAD--DVDEFGLPV 216
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BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Match: W4HCB2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HCB2_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.430e-43
Identity = 95/185 (51.35%), Postives = 129/185 (69.73%), Query Frame = 1 
Query:    1 IKGLDQELVRYRTALKKAKGPTATNIKRRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMADXXXXMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGIE-EDTGPSYVAQPASLPQEPSLVPESTGPTGVDEYGLPV 552
            I  L++EL +YR  + KAKGP  T+IK+RA++TLKRKKMYE QRD MA Q FNIEQ  FAI++ KD+  TV+AMK A+  LKA+ KK +  ++E++ DDMAD    MNEI +I+GRSY VG+++DE +L+AEL  L+DE    E +  +   PSY+A    LP  P+ V ++    GVDEYGLP+
Sbjct:   35 ISKLEEELQKYRQQMAKAKGPALTSIKQRALQTLKRKKMYEQQRDSMAAQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQDDMADMMDDMNEIQEILGRSYGVGQDIDESELEAELEGLEDEWAMEEAVAPQHAAPSYLA--TDLPAAPTGVKDTPTAAGVDEYGLPL 217
[Close]
BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Match: A0A485L0R2_9STRA (Aste57867_14479 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0R2_9STRA)

HSP 1 Score: 160 bits (405), Expect = 8.810e-42
Identity = 95/185 (51.35%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:    1 IKGLDQELVRYRTALKKAKGPTATNIKRRAMETLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKTLKADIKKIDINKVEDMTDDMADXXXXMNEINDIMGRSYNVGEELDEDDLDAELACLDDELDALEGIEEDTG-PSYVAQPASLPQEPSLVPESTGPTGVDEYGLPV 552
            I  L++EL++YR  + KAKG   T+IK+RA++TLKRKKMYE QRD MA Q FNIEQ  FAI++ KD+  TV+AMK A+  LKA+ KK +  ++E++ DDMAD    MNEI +I+GRSY +G+++DE +L+AEL  L+DE    E I   T  P+Y+A    LP  PS   +    TGVDEYGLP+
Sbjct:   35 IAKLEEELLKYRQQMAKAKGAALTSIKQRALQTLKRKKMYEQQRDAMASQSFNIEQASFAIETAKDSLDTVSAMKSAATQLKAETKKFNFAELENVQDDMADMMEDMNEIQEILGRSYGLGQDVDESELEAELEGLEDEWAMEEAIAPATSAPAYLA--TDLPAAPSGQKDKPQATGVDEYGLPM 217
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTZ1_ECTSI4.570e-10593.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FVB6_9STRA2.140e-5663.45Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2AMY1_9STRA5.120e-5563.04Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835ZMU4_9STRA2.300e-4960.77Snf7 family n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A812Y1R2_SYMMI1.140e-4752.31CHMP5 protein n=1 Tax=Symbiodinium microadriaticum... [more]
F0Y671_AURAN1.570e-4761.04Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S3K2P3_9STRA1.730e-4656.25Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4EE62_9STRA8.340e-4451.61Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W4HCB2_9STRA2.430e-4351.35Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A485L0R2_9STRA8.810e-4251.35Aste57867_14479 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:436843..440233 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTZ1
Preferred nameCHMP5
PFAMsSnf7
Model size1893
Max annot lvl2759|Eukaryota
KEGG rclassRC00918,RC01781
KEGG koko:K01698,ko:K12198
KEGG ReactionR00036
KEGG Pathwayko00860,ko01100,ko01110,ko01120,ko04144,ko04217,map00860,map01100,map01110,map01120,map04144,map04217
KEGG ModuleM00121,M00412
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000815,GO:0000819,GO:0000920,GO:0001919,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005770,GO:0005771,GO:0005773,GO:0005774,GO:0005829,GO:0006810,GO:0006886,GO:0006996,GO:0006997,GO:0007032,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007346,GO:0008104,GO:0008150,GO:0008333,GO:0009987,GO:0010008,GO:0010256,GO:0010564,GO:0010824,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0019058,GO:0019068,GO:0019222,GO:0022402,GO:0022411,GO:0022607,GO:0023051,GO:0030447,GO:0031090,GO:0031323,GO:0031410,GO:0031982,GO:0032509,GO:0032510,GO:0032511,GO:0032886,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0034613,GO:0036257,GO:0036258,GO:0036452,GO:0040007,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044087,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045324,GO:0046605,GO:0046755,GO:0046907,GO:0048284,GO:0048285,GO:0050000,GO:0050789,GO:0050794,GO:0051128,GO:0051179,GO:0051234,GO:0051276,GO:0051301,GO:0051303,GO:0051310,GO:0051493,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0060236,GO:0060255,GO:0061024,GO:0061025,GO:0061763,GO:0065007,GO:0070507,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0071985,GO:0080171,GO:0090169,GO:0090174,GO:0090224,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098813,GO:0098852,GO:0140014,GO:1901673,GO:1902115,GO:1903047,GO:1904896,GO:1904903
Exons4
Evalue1.99e-94
EggNOG OGsKOG1655@1|root,KOG1655@2759|Eukaryota
EC4.2.1.24
Descriptionvacuolar transport
Cds size504
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.144.1prot_P-littoralis_Contig142.144.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig142 436933..438934 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789669.363945-UTR-P-littoralis_Contig142:436842..4369321680789669.363945-UTR-P-littoralis_Contig142:436842..436932Pylaiella littoralis U1_48UTRP-littoralis_Contig142 436843..436932 +
1680789669.4275966-UTR-P-littoralis_Contig142:438934..4402331680789669.4275966-UTR-P-littoralis_Contig142:438934..440233Pylaiella littoralis U1_48UTRP-littoralis_Contig142 438935..440233 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789669.3776953-CDS-P-littoralis_Contig142:436932..4370521680789669.3776953-CDS-P-littoralis_Contig142:436932..437052Pylaiella littoralis U1_48CDSP-littoralis_Contig142 436933..437052 +
1680789669.3918445-CDS-P-littoralis_Contig142:437672..4378181680789669.3918445-CDS-P-littoralis_Contig142:437672..437818Pylaiella littoralis U1_48CDSP-littoralis_Contig142 437673..437818 +
1680789669.4038599-CDS-P-littoralis_Contig142:438330..4383971680789669.4038599-CDS-P-littoralis_Contig142:438330..438397Pylaiella littoralis U1_48CDSP-littoralis_Contig142 438331..438397 +
1680789669.414296-CDS-P-littoralis_Contig142:438763..4389341680789669.414296-CDS-P-littoralis_Contig142:438763..438934Pylaiella littoralis U1_48CDSP-littoralis_Contig142 438764..438934 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig142.144.1

>prot_P-littoralis_Contig142.144.1 ID=prot_P-littoralis_Contig142.144.1|Name=mRNA_P-littoralis_Contig142.144.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=168bp
METLKRKKMYEGQRDQMAGQQFNIEQTGFAIDSIKDTATTVAAMKDASKT
LKADIKKIDINKVEDMTDDMADMMEDMNEINDIMGRSYNVGEELDEDDLD
AELACLDDELDALEGIEEDTGPSYVAQPASLPQEPSLVPESTGPTGVDEY
GLPVGQTPAAPAQEVRL*
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mRNA from alignment at P-littoralis_Contig142:436843..440233+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig142.144.1 ID=mRNA_P-littoralis_Contig142.144.1|Name=mRNA_P-littoralis_Contig142.144.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3391bp|location=Sequence derived from alignment at P-littoralis_Contig142:436843..440233+ (Pylaiella littoralis U1_48)
ATTAAGGGGCTGGACCAAGAGCTGGTCCGTTACCGTACCGCGCTCAAGAA
GGCGAAAGGGCCGACGGCCACCAACATCAAGAGGCGCGCCATGGAGACCC
TGAAGCGAAAGAAGATGTACGAGGGGCAGAGGGATCAAATGGCCGGGCAG
CAGTTCAACATCGAACAGACCGGTTTCGCCATCGACTCCATCAAGGACAC
GGCCACCACGGTGAGTCCTGGAGTCCCCGCTAACAAAGCCTGCTGGATGA
CATTACAAAACCTACAAGCAGATGGCATTGGTTGTCGAATATTTGTAACA
CATTTAGCAGGTATTTTTTACTGATGAGTGCAACTGAGAATAGGAGAGGC
GGATCGACAGGGAGACAAACATGAAGAGACAAACATACAGGGAAGAGAAA
CAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCGGGGTGTGTGTG
TGTGGCATTTTTCCTTGTTCACACCAAGATTTTCTTTTTTTGGTTACCTC
TGCATTTCTTTTTACTCTTTACCAATAAAACTCACTTCAGCCACCGTGAA
GGTGGTGTTGACGGTTGGTAATGTCGCGTGAGAATAATCAAATACCAGGT
ATACAGCAGTACTCGGGAACTTTTTCAAGGTGAGGGTGCAGCTCGCCCCT
CGGCGTGACCTTTCTAGACCGACCAGCCAGCCAACCGTCGAGCACGTGAA
AAATAGTGAGCCTCATTTTCCAAAACGCCTCCCTTGGGTCCCCTCTCGAT
ACCAGACAATGCCAACCCATGATTTCACGCTCTTGTCTGCACCACGTTAC
ACGATGCGAAATGTGGACCGAACAAACCAGGTTGCGGCCATGAAGGACGC
GAGCAAGACCCTCAAGGCGGACATCAAGAAGATAGACATAAACAAGGTGG
AAGACATGACGGATGACATGGCCGACATGATGGAGGATATGAACGAGATC
AACGATATCATGGGCCGCTCCTACAAGTGAGTCTGCTCGCTGTTCTTGCC
GTCTCAAGGGGGCGGCCCCCCCGCACTACAACACGGTGTTCCTTTTTTTG
TTTTTGAAAGTTTTCTCGTGTAAAAGTACGTGGCGCTTGTCTGACTGCTT
TATGTTTGTGTCGAACGATAAAGGAGACGTGTGTTTTCATTCTGAGCGGA
TGTGTTTGACGTTCGTTCAGCAAAGTAGCAGCGCCACCATTCCCCCCCCC
ACTCACGATGTCGGGCTTGGTGGACGACACAGAAGAATCAACGAAGACTA
TCAGATCGCCGCTCCCCCCCAAAAGAAACAACGCCCCTACATGTCCTCGT
GATTTGAGAGTTTCGTTGAACCGCAGCAGGTCGGCATGCGTTGTGGTCCC
TTGTCTTCGCCACCCCAAGCATATTCAAGGCCTACTCAGTTTAATTTACG
CCAGACGATCGTGGTACACACATCACACACGCCCTTTTTTTTTTCCTTCG
TTGAACCAAAACTCGGCCGTTTTTCTTTGTTGCTGCAGTGTTGGGGAGGA
GCTGGACGAGGATGACCTCGACGCAGAGTTGGCGTGCCTGGACGACGAGC
TCGACGTGAGTGTGAATGTAGCAACCGCATCGAATCGTACCCGATGTGGC
AGCAAACACAGCCCTAATCCCGTTGTGATAAATTTGTTGGATTGTCTCGA
AGAGTAGTACGTACCCCTACAGGTCTACTCATTTTTGCCATATGAATAGC
GTGTTGCTGTCTACGGTCGGTCGCGCTATTGCAGGACCTGCTTTTTCACT
CACCAAATTACTTTTTGTGTATCTAGTGTGGTCTGCTGCGACTTGGCACT
CGTCTACCCCCCCCCCCCGTAGTTTATTACCCTCACACGTATGTAACGGC
CTTTCCCCTTTCCCCTCTTGGCGGACCTACATACATTGAACAACCCAACC
CCCCGGGTACCCACACATCAGGCCTTGGAAGGTATCGAAGAGGACACCGG
TCCGTCGTACGTGGCCCAACCGGCGAGCCTTCCGCAGGAGCCGTCCCTCG
TGCCGGAATCCACTGGCCCCACGGGGGTGGACGAGTACGGGCTCCCCGTG
GGTCAAACGCCGGCAGCGCCCGCGCAGGAAGTCCGATTGTGACCCACGGG
CTATCAAAGCTCGCGCCCGCTTGCTCTCTCGTTGGAAGGACAGCCAGAGA
GTTCTTTTGTTTCCAGACCAGATGTGGTTGGTGCCGCTGTCATGTTGTGT
TTTGGTGTTATATTTGGTTGCCGTGCTGTGTTGATTGTTTGGGTGGATCG
TTATAAAAGTGATGGAAAGTTCAAGAATATTATAAGTTTTAGTTTTTGTG
TTTCTTGCTTTGCTCCTGTCATATCGCGTGTATTCCTCGCGTCGGAATTA
TATTGAAGTCGGATGGAGTGTAGGGTAATGCCGGCAAGCTATCCCGGTGT
TTGCACGTCGGAGTTTCTCTCGACCTACCGATTGAAGTCCACAACAGGAT
ACAAGTCGGGGGGTTCAGCGAGTAGCGGCTTTGACCACTTTGTTCTAAGC
GTGGCTTCTCGGATTTTGGTTTTGGGCGGAGGGGGAACCACGACCGCGAA
GAATTTGACGCGGCCAGGACGGGAGAGGGCGCGATGACTGCTGTACTTCT
TGTTGGAGTAGGGGGCAAGAGCGGCCATAGCGTACCAATCGTCCCGCCTG
ATGTACATAGGAGGGAAGGGGGCGTTTCACAACGCCAGTATCGTTGTTTT
ATCGAACACCCGTTGCGACGCTGTTCTCCGGTCCTCCGTCCACGAGTAAA
TAAAGAAAATATCGTAAAATGTATTGACAAGACGTTGCAGCTCCTGCTGC
TCCTGCATTAGCAGAGCTACAGTCGGTACACCACAGCTATCATGATGGCT
GCATTTGCCCTGGAGATCCAAACTCGAAGAGCGAGTTCAAGGAAGGCTTC
GCCCGAGTGTCGTTCCTATCCCTGTAAACCTGCAGAACACTTCAGTTTGA
TGGATGGTGCACCGTTGTTGTCGAAACCTAGGCATGTATTCTGATAAGGT
GCAGATTCTGGTCTGACTACATCACGTGGCCTTTGTGTTCCCGAAACTAA
TTTGAAATTCCTGCCGCGGCTGAAATATTTCGCACGAATTACATACGTAC
ATGGTATGGTGTGACAGATCATACAGGCTGGTTCACGCAAGAAACCCAAC
ACGTATTCAACACTCCGTCCCGAACGCAATAAACCGCCGATTACGACACA
TATGGTACCAAACTGACCGCCGTCAATAGAAGAAGACCGTGACATTGTCG
GATATTTGTTTAAGGCTATATCAGTGGAGCTAGGGGAGGAAATGTGCAAT
TCCTACGGAAGTGACGTAGTTTAACACCCCCCAAGCTTAATAAATATCAT
GCTTTCCACCCAAATGCCAGATAGACAAGCTTCGAGGTATA
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Coding sequence (CDS) from alignment at P-littoralis_Contig142:436843..440233+

>mRNA_P-littoralis_Contig142.144.1 ID=mRNA_P-littoralis_Contig142.144.1|Name=mRNA_P-littoralis_Contig142.144.1|organism=Pylaiella littoralis U1_48|type=CDS|length=504bp|location=Sequence derived from alignment at P-littoralis_Contig142:436843..440233+ (Pylaiella littoralis U1_48)
ATGGAGACCCTGAAGCGAAAGAAGATGTACGAGGGGCAGAGGGATCAAAT
GGCCGGGCAGCAGTTCAACATCGAACAGACCGGTTTCGCCATCGACTCCA
TCAAGGACACGGCCACCACGGTTGCGGCCATGAAGGACGCGAGCAAGACC
CTCAAGGCGGACATCAAGAAGATAGACATAAACAAGGTGGAAGACATGAC
GGATGACATGGCCGACATGATGGAGGATATGAACGAGATCAACGATATCA
TGGGCCGCTCCTACAATGTTGGGGAGGAGCTGGACGAGGATGACCTCGAC
GCAGAGTTGGCGTGCCTGGACGACGAGCTCGACGCCTTGGAAGGTATCGA
AGAGGACACCGGTCCGTCGTACGTGGCCCAACCGGCGAGCCTTCCGCAGG
AGCCGTCCCTCGTGCCGGAATCCACTGGCCCCACGGGGGTGGACGAGTAC
GGGCTCCCCGTGGGTCAAACGCCGGCAGCGCCCGCGCAGGAAGTCCGATT
GTGA
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