mRNA_P-littoralis_Contig142.120.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig142.120.1
Unique NamemRNA_P-littoralis_Contig142.120.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Match: D8LTY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY5_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 9.770e-128
Identity = 335/736 (45.52%), Postives = 392/736 (53.26%), Query Frame = 1 
Query:  127 HWTLGEEVALKIALENEAGVRVRHPYGHRVWTEPD--STLAREGLATG-VPLRVALEGERAGRFLLDVSSCIRTDGGGSGGSGSGSCIGGKSGSGCGGDEVTNNGLILDLTTGAANGSVTILPAVPATKSHTPPHKQEDEATPVCSSAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELHLLISIPPAWAQGFNRPVLPLESLPAVFQLCPPSARAVKTSSTPTTPSACPTIHT-------AAMFRNGACSVRRLRFELLRSPEDDGGRGGGECRRARVAEPKGEKRATTIAATTSSSFSTAIEMTGIAVAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSSPSPTXXXXXXXXXXXXXATAAIDGRDEDGDHIDSSSNRSXXXXXXXACGGIVDDEHGMTTMFEVCAAESVSLGGFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDAKDLLPLLTFNLERNKCRRFVNVKDCEYNWGSPIQSNPHLARGE-FDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEATGS--------PSTSSAVVYLAQRTRNVQEREFFAKLLE---GAGASAGADXXXXXXXXXXXXXXXXXXXXXXXESQVLYFRCRELLEGGREQEEQIDGRNEXXXAAEKAGGSSPARDGAAEIKVGGVLWRRGCFPDIALYELSPIRA 2268
            HWTLGE VA+ +ALE+EAGVRV+HP+ + VW EP   S+ AR+GLATG VPLRV LEGERA RFLLDVSS I  +G G GG G+       S +  G       GL LDL+TG A+G V +LP+   T+  TPP    +++TPVC+               XXXXXXXXXXXXXXX                  E+ L IS+ PAWA+ FNRPVLPLESLPA+    P    AV  + T  TP+  PT          A + R+GAC+VRRLRFE+  +      RGGG+    R    + EKR        S S  TA E  G  V                                         ASS PS +               A + G D DG      S+  XXXXXXX        E G   + EVCAAES SLGGFFGTVWDCSLKMGAFLA+LGP +L GKRVVELGA  G +SALCAALGASEVVATD KDLLPLLTFNL RN C   +NV+ CEY+WGSP+  +P L+RG  FDV+ICSDLLYDPAGWEPLLESLR L A   GR+R+  P    G+        P ++ AVVYLA RTRN QE EFF  LL    G G +A A                        E  VL FRCR L E G                    GG         E    G++WR GCFPD+ALYELSP+ A
Sbjct:   36 HWTLGEPVAVTVALESEAGVRVQHPHSYHVWAEPQPSSSSARDGLATGAVPLRVTLEGERASRFLLDVSSSIE-EGDGVGGGGA-DRHDDSSHADQGRQCAPFKGLTLDLSTGTAHGWVAVLPSSRPTEPRTPPDLDHEDSTPVCACPA--------VAAQXXXXXXXXXXXXXXXGEENGCKPEGEEGVVAGAEVQLSISLSPAWARRFNRPVLPLESLPALVHSPPYHVAAVGATPTVATPTP-PTGRLEGEGQKRAVIGRSGACNVRRLRFEVGVA------RGGGDRDTGRRTIREEEKREEN-----SGSKFTANEAEGATVE-----DSHLAGAPARKHKGDCCGGPINISLPPPPSPPTTPASSWPSLSSSPVGN--------AATVSGSDGDG-ATSGLSSCXXXXXXXXXXXXXXXXERG-NGIIEVCAAESASLGGFFGTVWDCSLKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNSCPGSLNVEACEYDWGSPVGHHPALSRGVGFDVVICSDLLYDPAGWEPLLESLRQLLAAAGGRQRQ--PARGRGAXXXXXSPTPPSAPAVVYLAHRTRNPQESEFFDALLGQEGGRGPAAEASRRGGPPEGG--------------EEGVLSFRCRRLSEEG-------------------VGGCHDEGCRGGE----GLVWRGGCFPDVALYELSPVFA 695
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BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Match: A0A6H5JS56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS56_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 6.290e-108
Identity = 310/735 (42.18%), Postives = 360/735 (48.98%), Query Frame = 1 
Query:  184 VRVRHPYGHRVWTEPD--STLAREGLATGV-PLRVALEGERAGRFLLDVSSCIRTDGGGSGGSGSGSCIG--GKSGSGCGGDE--------------VTNNGLILDLTTGAANGSVTILPAVPATKSHTPPHKQEDEATPVCSSAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELHLLISIPPAWAQGFNRPVLPLESLPAVFQLCPPSARAVKTSSTPTTPSACPTIHT----------AAMFRNGACSVRRLRFELLRSPEDDGGRGGGECRRARVAEPKGEKRATTIAATTSSSFSTAIEMTGIAVAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSSPSPTXXXXXXXXXXXXXATAAIDGRDEDGDHIDSSSNRSXXXXXXXACGGIVDDEHGMTTMFEVCAAESVSLGGFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDAKDLLPLLTFNLERNKCRRFVNVKDCEYNWGSPIQSNPHLARGE-FDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEATGSPSTSS-------AVVYLAQRTRNVQEREFFAKLLE---GAGASAGADXXXXXXXXXXXXXXXXXXXXXXXESQVLYFRCRELLEGGREQEEQIDGRNEXXXAAEKAGGSSPARDGAAEIKVGGVLWRRGCFPDIALYELSPIRA 2268
            + + HP+ H VW EP+  S+ A +GLA GV PLRV LEGERA RFLLDVSS I            G C+G  G  G   GG +                + GL LDL+TG A+G V +LPA   T+  TPP    D++TPVC+              XXXXXXXXXXXXXXXX                  E+ L IS+ PAW + FNRPVLPLESLPA      P+       +TPT   A PT  T          A + R  AC+VRRLRFE+  +      RGGG+    R    + E+R        S S  T  E  G  V  +                                       S S SP              AT  +                 XXXXXXX      DD+HG   + EVCAAES SLGGFFGTVWDCSLKMGAFLA+LGPG+L GKRVVELGA  G +SALCAALGASEVVATD KDLLPLLTFNL RN C   VNV+ CEY+WGSP+  +  L++G  FDV++CSDLLYDPAGWEPLLESLR L A  AG R+ +P                   AVVYLA RTRN QE EFF  LL    G G +A A                        E  VL FRCR L +                   E  GG         E    G++WR GCFPDIALYELSP+ A
Sbjct:    1 MNIPHPHSHHVWAEPEPSSSSAHDGLAAGVVPLRVTLEGERANRFLLDVSSSIEE----------GECVGAGGSCGEAGGGADRHVDSSHADQGRQCAPSKGLTLDLSTGMAHGWVAVLPASRPTEPRTPPDLDHDDSTPVCACPA--------VAAXXXXXXXXXXXXXXXXGEENGCEPEGEDGVVAGAEVQLSISLSPAWVRRFNRPVLPLESLPAFVH--DPAYHVAAVGATPTV--ATPTPPTGRLEGEGQRRAVIGRRDACNVRRLRFEVGVA------RGGGDRDTGRRTPGEEERREEK-----SGSKFTPNEAEGATVE-DSHLAEAPSRKHKGGYCRGPRNTSLPPPPSPPATPAWSRPSLSSSPVGNAPAMSGSEWDGATGGLSSCSAXXXXXXXXXXXXXXXXXXXXXXN--DDKHG-NKIVEVCAAESASLGGFFGTVWDCSLKMGAFLAALGPGSLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNSCPGSVNVEACEYDWGSPVGHHLALSQGGGFDVVLCSDLLYDPAGWEPLLESLRQLLAA-AGERQRQPTRRXXXXXXXXXXXXXXXXAVVYLAHRTRNPQESEFFDVLLGQEGGRGPAAEASQRGGPREGC--------------EEGVLSFRCRRLSD-------------------EWVGGCHDEGCRGGE----GLVWRGGCFPDIALYELSPVFA 660
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BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Match: W4H5B2_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5B2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.260e-18
Identity = 68/182 (37.36%), Postives = 100/182 (54.95%), Query Frame = 1 
Query: 1402 VCAAESVSLGGFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSALCAALGA-SEVVATDAKDLLPLLTFNLERNKCRRFVNVKDCEYNWGSPIQSNPHLARGEFDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEATGSPSTSSAVVYLAQRTRNVQEREFFAKL 1944
            +  AES    G  G +WD SL + A+LA+  P  + GK V+ELG+G G V   CA+L A + VV TD  D++PLL +N+  N      +VK     WG+ I+   HL    +DV++ SD++YDP G++PL+ SLR LT                 SP T+   + +  R+R+ QE++FF  L
Sbjct:  311 ITLAESPGNLGIGGKLWDSSLILTAYLAAH-PAVVSGKHVIELGSGLGLVGLACASLPAVASVVLTDIDDVVPLLEYNVRLNDLSDKASVKPLW--WGTSIE---HLFNAPYDVVLLSDVVYDPFGYKPLVASLRDLT-----------------SPDTT---ILMGHRSRHPQEKQFFDSL 466
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BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Match: A0A6G0XVS3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVS3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.720e-18
Identity = 63/178 (35.39%), Postives = 95/178 (53.37%), Query Frame = 1 
Query: 1402 VCAAESVSLGGFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDAKDLLPLLTFNLERNKCRRFVNVKDCEYNWGSPIQSNPHLARGEFDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEATGSPSTSSAVVYLAQRTRNVQEREFF 1935
            +  AES    G  G +WD SL + A+LA+  P  +R +R +ELG+G G V   CA LG   V+ TD  D+ PLL +N+  N  +  V V+     WG+ ++    +    FDV++ SD++YDP G+EPL++SL+ L                    ST S  + +  R+R+ QE+EFF
Sbjct:  300 ITLAESPGNLGIGGKLWDSSLILTAYLAAH-PDIVRHRRAIELGSGIGLVGMSCAYLGVKTVILTDIDDVAPLLAYNVRLNDLQDQVAVQALW--WGTSVE----MLEPPFDVVLMSDVVYDPTGYEPLVQSLKDL--------------------STPSTTILMGHRSRHPQEKEFF 450
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BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Match: A0A485LH46_9STRA (Aste57867_21306 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LH46_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.360e-17
Identity = 67/179 (37.43%), Postives = 97/179 (54.19%), Query Frame = 1 
Query: 1411 AESVSLGGFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDAKDLLPLLTFNLERNKCRRFVNVKD-CEYNWGSPIQSNPHLARGEFDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEATGSPSTSSAVVYLAQRTRNVQEREFFAKL 1944
            AES    G  G +WD SL + A+LA+  P  + G+RV+ELG+G G V   CA L  + VV TD  D++PLL +N+E N      +V+  C   WG+   S  HL R  FDV++ SD++YDP G++PL+ SLR L                    +T    + +  R+R+ QE++FF  L
Sbjct:  305 AESPGNLGIGGKLWDSSLILTAYLAAH-PTIVTGRRVIELGSGLGLVGLACACLDVASVVLTDMDDVVPLLAYNIELNGLGARAHVQPLC---WGT---SAAHL-RPPFDVVLLSDVVYDPHGYKPLINSLREL--------------------ATPETTILMGHRSRHPQEKDFFDML 455
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BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Match: A0A024UIR6_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UIR6_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.270e-17
Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = 1 
Query: 1432 GFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSALCAALG-ASEVVATDAKDLLPLLTFNLERNKCRRFVNVKDCEYNWGSPIQSNPHLARGEFDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEATGSPSTSSAVVYLAQRTRNVQEREFFAKL 1944
            G  G +WD SL + A+LA+  P  + G+ V+ELG+G G +   CAAL  A+ VV TD  D++PLL +N+  N  +   +V+     WG+ I+   HL+   +DV++ SD++YDP G+EPL+ SLR LT                    T S  + +  R+R+ QE++FF  L
Sbjct:  339 GIGGKLWDSSLILTAYLAAH-PEVIAGQHVIELGSGLGLIGLACAALSSAASVVLTDIDDVVPLLEYNVRLNDLQDEASVRPLW--WGTSIE---HLSA-PYDVVLMSDVVYDPFGYEPLIASLRDLT--------------------TPSTTILMGHRSRHPQEKQFFDSL 483
[Close]
BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Match: A0A1V9ZX02_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX02_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 6.230e-17
Identity = 60/181 (33.15%), Postives = 95/181 (52.49%), Query Frame = 1 
Query: 1402 VCAAESVSLGGFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDAKDLLPLLTFNLERNKCRRFVNVKDCEYNWGSPIQSNPHLARGEFDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEATGSPSTSSAVVYLAQRTRNVQEREFFAKL 1944
            +  AES    G  G +WD +L +  +LA   P  L+ KRV+E+G+G G V  +CA LGA  V  TD  +++P+L +N+  N  ++    K     WGSP     HL    FDV++ SD++YDP G+ PL++S+                       S ++  + +A R+R+ QE++FF +L
Sbjct:  299 ITLAESPGHLGIAGKLWDSALILTTYLAR-NPHLLKSKRVLEVGSGLGLVGMVCAFLGAKSVTLTDMDEVVPMLNYNIRLNNLQKNAVAK--ALCWGSPAD---HL-EPPFDVVVMSDVVYDPTGYSPLVQSIL--------------------DVSVNTTKILMAHRSRHPQEKDFFDQL 452
[Close]
BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Match: T0S637_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S637_SAPDV)

HSP 1 Score: 94.0 bits (232), Expect = 2.060e-16
Identity = 62/181 (34.25%), Postives = 95/181 (52.49%), Query Frame = 1 
Query: 1402 VCAAESVSLGGFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDAKDLLPLLTFNLERNKCRRFVNVKDCEYNWGSPIQSNPHLARGEFDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEATGSPSTSSAVVYLAQRTRNVQEREFFAKL 1944
            +  AES    G  G +WD +L +  +LA   P  L GKRV+E+G+G G V  +CA LGA+ V  TD  +++P+L +NL+ N      +       WG+   S  HL+   FDV++ SD++YDP G+ PL+ +L  +T                    T S  + +A R+R+ QE++FF  L
Sbjct:  306 ITLAESPGHLGIAGKLWDSALILTTYLAR-NPQVLAGKRVLEVGSGLGLVGMVCAHLGAAAVTLTDMDEVVPMLQYNLKLNALEAVASAS--ALCWGT---SPAHLSP-PFDVVVMSDVVYDPTGYAPLVTTLLDVT--------------------TPSTTILMAHRSRHPQEKDFFELL 459
[Close]
BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Match: A0A1V9ZB44_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB44_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.680e-16
Identity = 60/178 (33.71%), Postives = 93/178 (52.25%), Query Frame = 1 
Query: 1402 VCAAESVSLGGFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDAKDLLPLLTFNLERNKCRRFVNVKDCEYNWGSPIQSNPHLARGEFDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEATGSPSTSSAVVYLAQRTRNVQEREFF 1935
            +  AES    G  G +WD +L +  +LA   P  L GKRV+E+G+G G V  +CA LGA+ V  TD +D++ +L +N+  N      + +     WGS +    HL    FDV++ SD++YDP G+ PL++SL                       ST +  + +A R+R+ QE++FF
Sbjct:  304 ITLAESPGHLGIAGKLWDSALILTTYLARY-PTLLAGKRVLEVGSGLGLVGMVCALLGAASVTLTDMEDVVAMLKYNIALNDLDSVAHARALA--WGSAVD---HL-DAPFDVVVMSDVVYDPTGYAPLVQSLL--------------------DVSTPATTMLMAHRSRHPQEKDFF 454
[Close]
BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Match: A0A067CIC8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CIC8_SAPPC)

HSP 1 Score: 89.7 bits (221), Expect = 4.690e-15
Identity = 60/181 (33.15%), Postives = 96/181 (53.04%), Query Frame = 1 
Query: 1402 VCAAESVSLGGFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDAKDLLPLLTFNLERNKCRRFVNVKDCEYNWGSPIQSNPHLARGEFDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEATGSPSTSSAVVYLAQRTRNVQEREFFAKL 1944
            +  AES    G  G +WD +L +  +L S     L  KRV+E+G+G G V  +CA LGA+ V  TD  +++P+L +NL+ N      +       WG+   S+ HL+   F+V++ SD++YDPAG+ PL+++L  +T                    T S  + +A R+R+ QE++FF  L
Sbjct:  306 ITLAESPGHLGIAGKLWDSALILTTYL-SRHQTVLSRKRVLEVGSGLGLVGMVCARLGAAAVTLTDMDEVVPMLQYNLQLNALEAIASA--APLCWGT---SSSHLSP-PFEVVVMSDVVYDPAGYAPLVQTLLDVT--------------------TPSTTILMAHRSRHPQEQDFFQLL 459
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY5_ECTSI9.770e-12845.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS56_9PHAE6.290e-10842.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4H5B2_9STRA2.260e-1837.36Uncharacterized protein n=12 Tax=Aphanomyces astac... [more]
A0A6G0XVS3_9STRA2.720e-1835.39Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LH46_9STRA2.360e-1737.43Aste57867_21306 protein n=1 Tax=Aphanomyces stella... [more]
A0A024UIR6_9STRA3.270e-1736.63Uncharacterized protein n=4 Tax=Aphanomyces invada... [more]
A0A1V9ZX02_9STRA6.230e-1733.15Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
T0S637_SAPDV2.060e-1634.25Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1V9ZB44_9STRA2.680e-1633.71Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067CIC8_SAPPC4.690e-1533.15Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:379113..384922 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTY5
PFAMsMethyltransf_16
Model size2289
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue9.07e-129
EggNOG OGsCOG3897@1|root,KOG2920@2759|Eukaryota
Ec32 ortholog descriptionNicotinamide N-methyltransferase-like
Ec32 orthologEc-12_003880.1
Descriptionmethyltransferase activity
Cds size2229
COG categoryJ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.120.1prot_P-littoralis_Contig142.120.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig142 379113..384862 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789668.6437154-CDS-P-littoralis_Contig142:379112..3797301680789668.6437154-CDS-P-littoralis_Contig142:379112..379730Pylaiella littoralis U1_48CDSP-littoralis_Contig142 379113..379730 -
1680789668.6539454-CDS-P-littoralis_Contig142:379961..3807911680789668.6539454-CDS-P-littoralis_Contig142:379961..380791Pylaiella littoralis U1_48CDSP-littoralis_Contig142 379962..380791 -
1680789668.663111-CDS-P-littoralis_Contig142:381138..3815471680789668.663111-CDS-P-littoralis_Contig142:381138..381547Pylaiella littoralis U1_48CDSP-littoralis_Contig142 381139..381547 -
1680789668.680066-CDS-P-littoralis_Contig142:382018..3822691680789668.680066-CDS-P-littoralis_Contig142:382018..382269Pylaiella littoralis U1_48CDSP-littoralis_Contig142 382019..382269 -
1680789668.688775-CDS-P-littoralis_Contig142:382770..3828271680789668.688775-CDS-P-littoralis_Contig142:382770..382827Pylaiella littoralis U1_48CDSP-littoralis_Contig142 382771..382827 -
1680789668.7059503-CDS-P-littoralis_Contig142:384798..3848621680789668.7059503-CDS-P-littoralis_Contig142:384798..384862Pylaiella littoralis U1_48CDSP-littoralis_Contig142 384799..384862 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789668.7171235-UTR-P-littoralis_Contig142:384862..3849221680789668.7171235-UTR-P-littoralis_Contig142:384862..384922Pylaiella littoralis U1_48UTRP-littoralis_Contig142 384863..384922 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig142.120.1

>prot_P-littoralis_Contig142.120.1 ID=prot_P-littoralis_Contig142.120.1|Name=mRNA_P-littoralis_Contig142.120.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=743bp
MSRCLLEPYESVRLCFRSELPEHWTLGEEVALKIALENEAGVRVRHPYGH
RVWTEPDSTLAREGLATGVPLRVALEGERAGRFLLDVSSCIRTDGGGSGG
SGSGSCIGGKSGSGCGGDEVTNNGLILDLTTGAANGSVTILPAVPATKSH
TPPHKQEDEATPVCSSAESSRQWRRRRQRQRRRRRAWVPAAGEAGGCERR
KEQDREEEGGGGGELHLLISIPPAWAQGFNRPVLPLESLPAVFQLCPPSA
RAVKTSSTPTTPSACPTIHTAAMFRNGACSVRRLRFELLRSPEDDGGRGG
GECRRARVAEPKGEKRATTIAATTSSSFSTAIEMTGIAVAVEDDDFCCCA
GVEVEKRKHSGGGGKPSSSEKEVLISPPTTASSSPSPTSSPSPLSAPAPA
PATAAIDGRDEDGDHIDSSSNRSASSSSTTACGGIVDDEHGMTTMFEVCA
AESVSLGGFFGTVWDCSLKMGAFLASLGPGALRGKRVVELGAGCGAVSAL
CAALGASEVVATDAKDLLPLLTFNLERNKCRRFVNVKDCEYNWGSPIQSN
PHLARGEFDVIICSDLLYDPAGWEPLLESLRLLTATGAGRRRERPPHEAT
GSPSTSSAVVYLAQRTRNVQEREFFAKLLEGAGASAGADAGKGGSSSSTT
EEGSEAGDEGDDESQVLYFRCRELLEGGREQEEQIDGRNEEEEAAEKAGG
SSPARDGAAEIKVGGVLWRRGCFPDIALYELSPIRAATSVAR*
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mRNA from alignment at P-littoralis_Contig142:379113..384922-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig142.120.1 ID=mRNA_P-littoralis_Contig142.120.1|Name=mRNA_P-littoralis_Contig142.120.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5810bp|location=Sequence derived from alignment at P-littoralis_Contig142:379113..384922- (Pylaiella littoralis U1_48)
GGCAGGTTCAACAAGAAATAGCGAGGTAGCAGCCGCTGCCTCATCCCACC
TGTAGCTGAGATGTCAAGATGCCTTCTGGAGCCTTACGAAAGCGTGAGGC
TGTGCTTCCGTAGCGAGCTTCCAGGTACTTTTTATGAGGCAGAGAAGGGA
GAATGTTCAGCAGTTGCGCTTCTCTCCTGTGCTATACAAGATGTGTGCGG
CGCAATTGCACTTGTGAACTGCGCCGCTCTTCTACAGTATGATATGTTCG
AAAAGTAGATGCAACATTGTGGTAGTCTCCGCTGCGCTCCGATGCTACAC
ATGTACGTCATGTGTGCTCTCTTGGTTGTTGGGTGCACACCCCTTTCCCA
TGTTTTGTTTATATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCT
CTCTTTCTCTCTTTCTCTCTCTTGGTTTGCACATCTCATCATGCAGGGGA
GTTGCCTCCCCGATCGTTCACCTTTGCGTACCGTTTTCGTTTGTGTACGA
AGTACGTACAAGTACATAACAGCATAAGTGTGCTGCTCGTCTTATCTCGC
TGATCTCGCGACGGTACGCAACGGCCTGTAGCCTCCGGCGCGCACTTCCC
TGGCTCGTCTGGCCCACGTCCTTTATCTACAGCAGTACCTTAGCTGCAGT
GTTGTGCGGAAACGACTCCCCTTCAAATCAGATTATTTTCTACTGTATAC
CAGCCTTGTGTGATATCTCGGGGTCCGTTGTTTTGTTTTTGGCGGAGTCT
CATTGTCGTGCATTTATTTGGTGGACTGAGGGGATCTCCCAAGTACTATA
CCTATACCTCTTCTGGGGCAAGCAGCCTGTGACCACGGAAATCGTACCTG
ATCGGTGGAGTACGGACATTAGAAGGTACTGAGGAGAGATCGGAATGGTT
TTTAATGTGAAGACAACAACAACAACAACAACAACAACAACAACAACAAC
ATACTATTACCATCACGTGGAGCTGTCTGACTACTTGTTTTTGTCCCAGT
ATGTTCCTGGTAGGATGCAGGATCTTAAGTGTGCTTCGCGTGTGGAGGCA
TCATACCGCCGTATGTGTACGTGAGATGCAGCCGTTGGTACCGATGTATC
ACAACCTGCTTTTCCTGTTCGTGACAGGGGCCAATCCTTTACACTAACAG
CTCCGGTAACGCAATCCTCGAAGCGCTACTGCTGCTGTGCTGCTGATGAT
CCCTGGTCCATATCTCCAGCTAGTGCTCTGCCAGCGGTCCTTTGAGAACA
ACAAGCAACGTACTTTGTACACTACACCTCACGTATCAATGACTGTTCGT
ACAATCACGCGCATTCTTTATTCGTTGCACGTCATGCGGATGCGGGTGTG
TGAACGTGTTCAACATCACACACGATGTCGTTGTGCTCGTGTACACAATG
TGTGGAGTTCCTCTCGATTCGGATCGACCTCTAACAGATACACCGCTCGA
ACGAGCTGCCGTTCGACACGTGCCTTCAGTTGCATGATACTTCGCACTCC
GCACATTTATCATCATGCATACACGTGGTTGCAACGTAGAGTACACAGCT
TTGATAGGTTAGAGCCGAGGCATACACAGCAGGTGTTACGCAACATGTGA
CATAAGAAAGGGTAAACAGCAGGTGTTAGGCAACATGTGACAGATTGAAA
TATTTGGATTTTTCTAGAACAAATCGACGCCGCCGTGGATGACGTCACCG
GTCGACCAGGGATTTTTGGCCAATCAGAAAAAAATCTCCTCTCAAAAAGA
TCTACCGAACGGAAAACCGGAACTTGTGACATCAATTTTTTCAACCAATC
TGAAAGTTCCTTTCAAAAAGTTTGGCCAATCAGAAAACTGCGAGCCAGTT
TTCTCTCTCTCAGCAATACTAACTCTTCGTGTAAAGGACTTTGACGGGTT
TCGCAGCTCCCCACCCTCTGTCTCTTCCTTTGAATTGAGTACACGATTCC
AGAATGCACTGCACTGAGTAGGTGTTAGAAATATATTGGTCTTATGTGTA
ACGTCGCCTCGCGTTTCAGCTGATCCCACGCCCAATTGTCCCCTCTCCCC
CCCTCGGCTTCTGCCACCGACCATACTTGTACCTGCCATAAGTAGAACAC
TGGACGCTGGGAGAGGAAGTGGCGTTAAAAATCGCCCTCGAAAACGAAGC
AGGTGCGCTCGTGCGTGCGTTCGTGCGTGCGTGCGTCGGCAAGCAGCAGC
GTGTAAGACGTACCTGGTACCGTACGTACGTACAGGTATTAATGTCTTGT
TGCGTCGGAGAGCCCCGCGTCGGCTCCGCCTGCGGTATCGTAGCCAGTAG
GAGCATTGCACATTGCGTGCGCTTTATCTCGTGCCTCTAGTGGCGTCGGC
GTAGTGTGGTGGTGCATGCAAGTCGGACTCGGGACAGTACGGTAGTCATG
TCATGTGACCGCAAGGCTCAAAATCCCTTTTTTTCTCTTTTTTTCTTCTT
TTTTCCCGACTGCTACCAGTCTCGACCGAGGCAGGCCCCTCCACCTCTTT
CAACAGAAAAAACGGGGGTTGGGGGGCTTAGTGAAGCCTGTGCTTCACTC
TGACATCACCCAATCTGTCAATCCGTAACTGGCCTTCACTTCCGCTCGGC
GAACACGACACAACGCAAACCAAAAACACTTGTGATGGCAATTGGACATG
CAGGCGTGAGGGTTCGGCATCCGTACGGCCATCGCGTCTGGACGGAACCA
GATTCGACGTTGGCGCGCGAAGGTTTGGCGACGGGTGTGCCCCTTCGAGT
CGCTCTGGAGGGCGAGAGAGCCGGTCGATTCCTGCTCGATGTGTCCAGCT
GCATCAGAACAGACGGCGGCGGTAGCGGCGGTAGCGGTAGCGGTAGCTGT
ATCGGGGGCAAGAGCGGAAGCGGTTGCGGTGGCGACGAAGTGACCAACAA
TGGGGTGAGATGCGTTCTCATCTGCCGTCCCCTACGCTCTTCCATGCGAA
CATTGAGAACAAGTGCATGTTTGTGCCGCGGTATCCGTACCCGCCGATGT
GTTCGCGTTGCGTGCGGCAAGACAAGCTGGTGTGGAGGATTCAGGTTTAT
TTCACGCTAGCATTTTCTTGGTCTCCGTGGGTTTCTTTTTCTCTTCGTGG
GTCTCTGTGTGTGCTTAAGGTGATCTATCTATCTCGCTCTCTTTCTATAT
GTGTGTGTCTTTTTTTGCTCTATCCCTCGGTTTGTTTCACTTCCTGTTCG
TGGAATTCCATTTCTGTATCCCCCCCCGCCATAGCTCGTTGTCGCTCATG
GCCTGCCTCCAAGTCAAAAGACATCTGACCCGATTCCCTCCTCCTCCTCC
CTCTCTTCCTCCTTCTCCCCCCCCCCCACCCCTTCCGATTCCCCTCCCCC
TGTCGACCGTGCACCGAAAAATCAGCTCATTCTGGACCTTACCACCGGAG
CGGCGAATGGATCGGTCACTATCTTACCGGCGGTTCCGGCCACTAAATCC
CACACTCCGCCACACAAACAAGAAGACGAGGCCACACCCGTCTGCTCCTC
AGCGGAAAGCTCGCGGCAGTGGCGACGGCGGCGGCAGCGGCAGCGTCGAC
GGCGGCGGGCTTGGGTACCGGCAGCCGGGGAGGCTGGCGGGTGCGAGCGG
AGAAAAGAGCAAGACCGGGAAGAGGAAGGAGGTGGAGGTGGAGAGCTCCA
TCTATTGATATCTATTCCGCCCGCGTGGGCCCAGGGGTTCAATCGTCCGG
TTCTCCCGTTGGAGTCTTTGCCAGCTGTGTTTCAGCTTTGTCCTCCGTCC
GCCCGAGCGGTAAAGACCTCTTCAACCCCTACTAGTACTACCCGCGAGAG
CAGAGATACGGGTGGGCGTGTGTGTTTGTGATGTTGTCTTGATCATCCGT
CCGTCGCGCAGGTAGTTTTTTGGGGGCGAGGTGCTCGTTGCTTGTTCGAG
TACGGCGCGACCGCGCGTGCGTGCAGAAGGCGACAGAGGTTACAGACGTA
CCCAAAGCATTCGAGACAAGTGCTACGCCCCCCCCCAGCCCCAACCCCCA
CCCACCAACCCCAGCCCACCTACCCACCCCTGACCCTCTCCTGTTCTTGT
GTTCGCCACGGTATACGGCACGGCACACTTGCTGTTGTTCTTGCTGCGTT
CTTATGAACGCACTCGTAGGGCAAAGACGAGCGCCCTCGGCGTGCCCGAC
TATCCACACGGCGGCGATGTTTCGGAACGGTGCGTGCAGCGTCCGTCGTC
TGCGCTTCGAGCTCCTTCGCAGCCCCGAGGATGACGGCGGCCGGGGCGGC
GGCGAGTGCCGGCGGGCACGCGTAGCGGAACCAAAGGGAGAGAAAAGGGC
TACTACCATCGCCGCCACCACCTCCTCCTCCTTCTCCACCGCCATCGAAA
TGACGGGTATCGCTGTTGCCGTGGAAGACGACGACTTCTGCTGCTGCGCC
GGAGTAGAAGTAGAGAAAAGAAAACACAGTGGCGGCGGGGGGAAACCATC
GTCGTCGGAAAAGGAAGTCCTCATATCTCCGCCAACGACGGCATCGTCAT
CACCATCACCCACATCATCGCCGTCTCCGTTATCAGCACCAGCACCAGCA
CCAGCCACAGCAGCTATCGATGGGCGAGATGAGGATGGTGATCACATCGA
TAGCAGCAGCAACAGAAGCGCTAGTAGCAGCAGCACCACCGCGTGCGGCG
GCATCGTCGACGACGAACACGGCATGACGACAATGTTCGAGGTGTGTGCC
GCGGAGTCCGTGTCCCTCGGAGGGTTCTTCGGAACGGTCTGGGACTGTTC
GTTGAAGATGGGAGCGTTCCTGGCCTCTCTGGGTCCGGGAGCCCTGAGGG
GGAAAAGAGTTGTCGAGCTCGGCGCCGGCTGCGGCGCCGTCTCGGCTCTG
TGCGCGGCGTTGGGCGCATCCGAAGTTGTGGCGACGGACGCGAAGGACTT
GTTGCCTCTGCTGACATTCAACTTGGAGCGGAACAAGTGCCGGAGATTCG
TAAACGTGAAGGTGGGGGGTGGGGGGGGTGGGGTGGCGGGCCAGTCGGTT
GCCAGCAACACTAGGATTGGCTGTGCGGTGGGCGGCTGACACTTCGAGCG
TGTGGGGGGGCAGGTTGTTCTCACCTCACCTGCTGTTTAGTCCCGGCACA
ACTCCCAAACACCAATGCAATATAGACGTGCGGTACCCGATCCTCCCCCC
CCCCCATTGCTCGCGTGTTTTTCCTTCCAAAAACGGAATCAGGACTGTGA
GTACAACTGGGGCTCGCCGATCCAAAGCAACCCGCATCTGGCCCGCGGCG
AATTTGACGTCATTATCTGCTCTGACCTTCTCTACGATCCGGCCGGGTGG
GAGCCGCTCTTAGAGTCGCTCCGACTGCTAACGGCGACGGGAGCGGGACG
GCGACGGGAGCGGCCGCCGCATGAGGCGACGGGATCGCCGTCGACTTCAT
CGGCAGTCGTTTACCTGGCGCAACGGACACGAAACGTGCAAGAGCGCGAG
TTTTTTGCCAAACTTTTGGAAGGGGCGGGTGCGAGTGCGGGTGCGGACGC
AGGGAAAGGAGGCAGCAGCAGCAGCACTACCGAGGAGGGCAGCGAAGCAG
GGGACGAGGGAGATGACGAGAGTCAAGTCTTGTATTTCAGATGTCGGGAG
CTATTGGAAGGGGGGAGGGAGCAGGAGGAGCAGATAGACGGGAGAAACGA
AGAGGAAGAAGCGGCGGAGAAAGCGGGCGGCTCTTCGCCTGCGAGGGATG
GCGCGGCAGAAATCAAAGTAGGGGGGGTGTTGTGGAGGCGAGGGTGTTTC
CCCGATATAGCTCTGTATGAGCTTTCGCCTATTCGGGCCGCCACGAGCGT
TGCGCGTTAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig142:379113..384922-

>mRNA_P-littoralis_Contig142.120.1 ID=mRNA_P-littoralis_Contig142.120.1|Name=mRNA_P-littoralis_Contig142.120.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2229bp|location=Sequence derived from alignment at P-littoralis_Contig142:379113..384922- (Pylaiella littoralis U1_48)
ATGTCAAGATGCCTTCTGGAGCCTTACGAAAGCGTGAGGCTGTGCTTCCG
TAGCGAGCTTCCAGAACACTGGACGCTGGGAGAGGAAGTGGCGTTAAAAA
TCGCCCTCGAAAACGAAGCAGGCGTGAGGGTTCGGCATCCGTACGGCCAT
CGCGTCTGGACGGAACCAGATTCGACGTTGGCGCGCGAAGGTTTGGCGAC
GGGTGTGCCCCTTCGAGTCGCTCTGGAGGGCGAGAGAGCCGGTCGATTCC
TGCTCGATGTGTCCAGCTGCATCAGAACAGACGGCGGCGGTAGCGGCGGT
AGCGGTAGCGGTAGCTGTATCGGGGGCAAGAGCGGAAGCGGTTGCGGTGG
CGACGAAGTGACCAACAATGGGCTCATTCTGGACCTTACCACCGGAGCGG
CGAATGGATCGGTCACTATCTTACCGGCGGTTCCGGCCACTAAATCCCAC
ACTCCGCCACACAAACAAGAAGACGAGGCCACACCCGTCTGCTCCTCAGC
GGAAAGCTCGCGGCAGTGGCGACGGCGGCGGCAGCGGCAGCGTCGACGGC
GGCGGGCTTGGGTACCGGCAGCCGGGGAGGCTGGCGGGTGCGAGCGGAGA
AAAGAGCAAGACCGGGAAGAGGAAGGAGGTGGAGGTGGAGAGCTCCATCT
ATTGATATCTATTCCGCCCGCGTGGGCCCAGGGGTTCAATCGTCCGGTTC
TCCCGTTGGAGTCTTTGCCAGCTGTGTTTCAGCTTTGTCCTCCGTCCGCC
CGAGCGGTAAAGACCTCTTCAACCCCTACTACGCCCTCGGCGTGCCCGAC
TATCCACACGGCGGCGATGTTTCGGAACGGTGCGTGCAGCGTCCGTCGTC
TGCGCTTCGAGCTCCTTCGCAGCCCCGAGGATGACGGCGGCCGGGGCGGC
GGCGAGTGCCGGCGGGCACGCGTAGCGGAACCAAAGGGAGAGAAAAGGGC
TACTACCATCGCCGCCACCACCTCCTCCTCCTTCTCCACCGCCATCGAAA
TGACGGGTATCGCTGTTGCCGTGGAAGACGACGACTTCTGCTGCTGCGCC
GGAGTAGAAGTAGAGAAAAGAAAACACAGTGGCGGCGGGGGGAAACCATC
GTCGTCGGAAAAGGAAGTCCTCATATCTCCGCCAACGACGGCATCGTCAT
CACCATCACCCACATCATCGCCGTCTCCGTTATCAGCACCAGCACCAGCA
CCAGCCACAGCAGCTATCGATGGGCGAGATGAGGATGGTGATCACATCGA
TAGCAGCAGCAACAGAAGCGCTAGTAGCAGCAGCACCACCGCGTGCGGCG
GCATCGTCGACGACGAACACGGCATGACGACAATGTTCGAGGTGTGTGCC
GCGGAGTCCGTGTCCCTCGGAGGGTTCTTCGGAACGGTCTGGGACTGTTC
GTTGAAGATGGGAGCGTTCCTGGCCTCTCTGGGTCCGGGAGCCCTGAGGG
GGAAAAGAGTTGTCGAGCTCGGCGCCGGCTGCGGCGCCGTCTCGGCTCTG
TGCGCGGCGTTGGGCGCATCCGAAGTTGTGGCGACGGACGCGAAGGACTT
GTTGCCTCTGCTGACATTCAACTTGGAGCGGAACAAGTGCCGGAGATTCG
TAAACGTGAAGGACTGTGAGTACAACTGGGGCTCGCCGATCCAAAGCAAC
CCGCATCTGGCCCGCGGCGAATTTGACGTCATTATCTGCTCTGACCTTCT
CTACGATCCGGCCGGGTGGGAGCCGCTCTTAGAGTCGCTCCGACTGCTAA
CGGCGACGGGAGCGGGACGGCGACGGGAGCGGCCGCCGCATGAGGCGACG
GGATCGCCGTCGACTTCATCGGCAGTCGTTTACCTGGCGCAACGGACACG
AAACGTGCAAGAGCGCGAGTTTTTTGCCAAACTTTTGGAAGGGGCGGGTG
CGAGTGCGGGTGCGGACGCAGGGAAAGGAGGCAGCAGCAGCAGCACTACC
GAGGAGGGCAGCGAAGCAGGGGACGAGGGAGATGACGAGAGTCAAGTCTT
GTATTTCAGATGTCGGGAGCTATTGGAAGGGGGGAGGGAGCAGGAGGAGC
AGATAGACGGGAGAAACGAAGAGGAAGAAGCGGCGGAGAAAGCGGGCGGC
TCTTCGCCTGCGAGGGATGGCGCGGCAGAAATCAAAGTAGGGGGGGTGTT
GTGGAGGCGAGGGTGTTTCCCCGATATAGCTCTGTATGAGCTTTCGCCTA
TTCGGGCCGCCACGAGCGTTGCGCGTTAA
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