mRNA_P-littoralis_Contig142.100.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig142.100.1
Unique NamemRNA_P-littoralis_Contig142.100.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Match: D8LTX7_ECTSI (FERM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTX7_ECTSI)

HSP 1 Score: 521 bits (1343), Expect = 2.960e-179
Identity = 269/342 (78.65%), Postives = 292/342 (85.38%), Query Frame = 1 
Query:  964 MALVQLSAVPVLVRLQDGSKVEVMADSWTSVADLEKQIGTQIGVKALFPYTVFEVTNTDGQRALRAKERILDTVAQWRAQTVATSGVKKFQLLYKVRLHIRPDKDDLAGIKLTYLQAVQDLRDGIYMVSTEDSIQLAAFQLQASRGDYDKKNCTVGSLEKELSTLAPPQILAQPKGDDFKGTKDFANKILAYYMMSLKGVSKKEARALFMGLMYEVPSFGRAYFDGEMPGKSVVVGIGAAGVRLLDASDGDRPILAEYSFDIIASFVCSDGVTAVMTLTAREGE----LKPTLVTIQSAQAPQMKSLVHAYMVRYVLPRQNKEEAENKRKKAEAENSVVPFS 1977
            MAL QLSAVPVLVRLQDG+KVEVMADSWTSV DLEKQI ++IG+K    +TVFE TNTDGQRALRAKERILDTVAQWR Q  ATSGVKKFQLL+KVRLH+RPD DDLAGIKLTYLQAVQDL DG+YMVSTEDS+QLAAFQLQASRGDYDKKNCT GSLEKEL+TL PPQILAQP+GD+F+G KD ANKILAYYMMSLKG+SKKEARALFMGLM E PSFGRAYFDG    K VVVGIGA GV+ LDA+DGDRP+LAEY FD I SFVCSD  TAVMTL AREGE    +KPT + IQSAQA QMKSLVHAYMVRY+LPR+ K+E   K K    E  VVPF+
Sbjct:    1 MALAQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQIASKIGLKCCTAFTVFEATNTDGQRALRAKERILDTVAQWRTQAAATSGVKKFQLLFKVRLHLRPDDDDLAGIKLTYLQAVQDLCDGVYMVSTEDSVQLAAFQLQASRGDYDKKNCTAGSLEKELTTLVPPQILAQPEGDEFRGRKDLANKILAYYMMSLKGISKKEARALFMGLMRENPSFGRAYFDGLSQEKPVVVGIGADGVQFLDATDGDRPVLAEYGFDSIGSFVCSDEETAVMTLAAREGEQTSFVKPTAILIQSAQASQMKSLVHAYMVRYILPRRKKKEEGEKAKTVNKETDVVPFA 342
[Close]
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Match: D8LTX8_ECTSI (MyTH4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTX8_ECTSI)

HSP 1 Score: 469 bits (1207), Expect = 2.680e-159
Identity = 243/307 (79.15%), Postives = 262/307 (85.34%), Query Frame = 1 
Query:    1 MEGLPQNYRDNITVDNGVEIVWVNQKGQVIQKDNGSTSSSAAAEDDGDVVVGMPRVASIRKVEVGAEANNNSSNSPASPGGTRRSSVAGTVSYS--LIGTWFTNGPDGGXXXXXXXVTPGSPGGSASPLETEEDDADPEGHPCMALEPYARDMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQSKAMSSECVSLFGDIMVYMGDKKGKDSGMQLLKNLQTRMLAATQDLRDEIFCQVCKQTTSNPDANSDLRGWQLLLSILAVATPSKALIPCFKKHCELGPVGSIPQMYSQYVLSALQK 915
            MEGLPQNYRDNIT+DNGVEIVWVNQKGQVI KD    +SSA  EDD DVVVGMPRVASIRK  V  E NN+S   PASPGGTRR+SVAGTVS S  LIG WFTNG D G         P SP GS  P +TE+DDADPEGHPCMALEPYAR+MYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQ+KA+SSECV+ FGDIMVYMGDKK K+SGMQL+K+L TR+LA+TQ+ RDEI CQVCKQTTSNPDANSDLRGWQL+LSILAVATPSK LIPCF+KHCELGPVGSIPQ Y+QY LSAL K
Sbjct:    1 MEGLPQNYRDNITIDNGVEIVWVNQKGQVIPKDKAGAASSAV-EDDADVVVGMPRVASIRKSAVETELNNSSL--PASPGGTRRTSVAGTVSPSPQLIGAWFTNGTDTGGEG-----APTSPAGSTGPPDTEDDDADPEGHPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALHK 299
[Close]
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Match: A0A6H5JSV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV5_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 4.160e-65
Identity = 121/176 (68.75%), Postives = 131/176 (74.43%), Query Frame = 1 
Query:  964 MALVQLSAVPVLVRLQDGSKVEVMADSWTSVADLEKQ-------------------------------IGTQIGVKALFPYTVFEVTNTDGQRALRAKERILDTVAQWRAQTVATSGVKKFQLLYKVRLHIRPDKDDLAGIKLTYLQAVQDLRDGIYMVSTEDSIQLAAFQLQASR 1398
            MALVQLSAVPVLVRLQDG+KVEVMADSWTSV DLEKQ                               I ++IG+K    +TVFEVTNTDGQRALRAKERILDTVAQWR Q  ATSGVKKFQLL+KVRLH+RPD DDLAGIKLTYLQAVQDL DG+YMVSTEDS+QLAAFQ   +R
Sbjct:    1 MALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQPAFDEMHTPRAHDGLILILQTHDDLLVNNRQIASKIGLKCCTAFTVFEVTNTDGQRALRAKERILDTVAQWRTQAAATSGVKKFQLLFKVRLHLRPDDDDLAGIKLTYLQAVQDLCDGVYMVSTEDSVQLAAFQACGAR 176
[Close]
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Match: A0A7R9UDD6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDD6_9STRA)

HSP 1 Score: 217 bits (553), Expect = 8.840e-60
Identity = 155/484 (32.02%), Postives = 242/484 (50.00%), Query Frame = 1 
Query:  499 METLLSWKGKQITVPLTIACNQSKAMSSECVSLFGDIMVYMGDKKGKDSGMQLLKNLQTRMLAATQDLRDEIFCQVCKQTTSNPDANSDLRGWQLLLSILAVATPSKALIPCFKKHC--ELGPVGSIPQM--YSQYVLSALQKDSSLIPRKAPPCDVEIMALVQLSAVPVLVRLQDGSKVEVMADSWTSVADLEKQIGTQIGVKALFPYTVFEVTNTDGQRALRAKERILDTVAQW-------RAQTVATSGVKKFQLLYKVRLHIRPDKDDLAGIKLTYLQAVQDLRDGIYMVSTEDSIQLAAFQLQASRGDYDKK---NCTVGSLEKELSTLAPPQILAQPKGDDFKGTKDFANKILAYYMMSLKGVSKKEARALFMGLMYEVPSFGRAYFDGEMPGK-----SVVVGIGAAGVRLLDASDGDRPILAEYSFDIIASFVCSDGVTAVMT--LTAREGELKPTLVTIQSAQAPQMKSLVHAYM 1887
            ME +LS K   I   L   C  +  ++ E V  F +I  YMGD+      +     L   ML A +DLRDE++CQ+ KQTT NP  +S+++GW+LL  +     P + L P    HC  E G   S P++  Y+ YVL  ++K   L PR+  P  VEI A  +L  + V V   D   + +  DSW++  +LE +    +G+K   P+ ++EV+  + +R L  +ERILD VA W       R +    + +++F+ +YKVRL +    DD+AG+ L Y+QA  D+ D  Y  +  DSI LAA Q+Q   GDY      N   G + K ++     +   + KG+D    +D   K+       L G SK+EAR  ++  +     +G AYF  E         +VV+ I + G+ ++D    D   LAEY+++ + ++  S     V+T  +T R        V  ++ Q  +M S+V AY+
Sbjct:    1 MEKILSHKNDTIRTSL---CQLNGDLAQEAVQSFRNITGYMGDRSTTKGAVDHSLKLLNNMLLAPEDLRDEVYCQIIKQTTKNPSVDSNIKGWELLAILAGSFPPGEELKPYVMHHCAAEHGRRHSNPKVRDYAVYVLHRIKKVCRLGPRREIPTPVEIEATRRLLPLNVRVSFLDDRYITLPVDSWSTAKELEGRCAKMLGIKDGTPFALYEVSTEEEERVLEPEERILDLVAYWTRLETDERTRKGKMANIEEFRFVYKVRLFLDVPDDDVAGVHLMYIQATHDVVDARYPCTDNDSITLAALQVQEEHGDYPGPLGPNPLTGKVSKYIA-----KKYLEEKGEDV--LEDSITKLY----QKLTGYSKREARLSYLDYVKAWKIYGSAYFFAEPQSNREFPSAVVLAINSKGILVVDPDTKDY--LAEYTYNNVVTWGHSQNSFVVVTGNITRR------VKVYFRTEQGKEMNSIVRAYV 462
[Close]
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Match: A0A7S2F2Z0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2Z0_9STRA)

HSP 1 Score: 213 bits (543), Expect = 3.590e-56
Identity = 145/500 (29.00%), Postives = 251/500 (50.20%), Query Frame = 1 
Query:  439 YARDMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQSKAMSSECVSLFGDIMVYMGDKKGKDSGMQLLKNLQTRMLAATQDLRDEIFCQVCKQTTSNPDANSDLRGWQLLLSILAVATPSKALIPCFKKHC-ELGPVGSIPQM--YSQYVLSALQKDSSLIPRKAPPCDVEIMALVQLSAVPVLVRLQDGSKVEVMADSWTSVADLEKQIGTQIGVKALFPYTVFEVTNTDGQRALRAKERILDTVAQW-------RAQTVATSGVKKFQLLYKVRLHIRPDKDDLAGIKLTYLQAVQDLRDGIYMVSTEDSIQLAAFQLQASRGDYDKKNCT--VGSLEKELSTLAPPQILAQPKGDDFKGTKDFANKILAYYMMSLKGVSKKEARALFMGLMYEVPSFGRAYFDGEMPGK-----SVVVGIGAAGVRLLDASDGDRPILAEYSFDIIASFVCSDGVTAVMTLTAREGELKPTLVTIQSAQAPQMKSLVHAYM 1887
            YA   +N  RKG+ G K T  E + SWKG +  +  ++     K +  E V  F ++  +MGD+    + M     L   ML + +DLR+EI+CQ+CKQT +NP   S L GWQL++  LA   P K L      +C E     S PQ+  Y+++ L  + + + L PR+  P  VE+ A  +L    V V   DG  + +  +SWT+    ++ I  ++G++ + P+ +FE T+ + +R L  +ERILD  A W       R++      +++++ ++KVRL +  D+ DLA +++ Y+QA  D+ +  Y  + +DS+ LAA Q+Q   GD+    CT   G + K L++    +       DD     +   ++L  Y   L G S++EAR  ++ ++     +G +Y+  E          VV+ I A G+ ++D     +  + E+ +  + ++  S     V+T       ++ T V  +S Q  +M ++V AY+
Sbjct:  247 YAEKNFNYDRKGIFGMKTTT-EKITSWKGGRDLIKTSLITLNDKNLQGEAVQCFRNVTGFMGDRNSNKTNMDHAYKLLNCMLVSIEDLRNEIYCQICKQTKANPSMESTLAGWQLMILCLAAFPPGKLLKDYLMAYCAENIREESPPQVRQYAEFALHCVPRITELGPRRELPTIVEMEACKRLQPATVRVNFLDGRYIMMPVNSWTTAELFKEMICLRLGIRTMKPFAIFEETSNEEERVLDPEERILDLAAYWTRLQNEERSKKGRGGEIEQYKFVFKVRLFLDVDQTDLAAVEVMYIQASHDVVESRYPCTPQDSVTLAALQVQEEYGDHPGGECTYLTGKIGKYLASKYLEET------DD---ETELEAQVLKLYER-LHGYSQQEARLSYLDVVKSWKIYGSSYYYVEPQNNRAFPHEVVLAINAKGILVVDPDT--KEYVQEFPYREVVTWGHSPNSFVVVT----GNVVRQTKVYFKSDQGKEMNTIVRAYV 729
[Close]
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Match: A0A812RIC2_SYMMI (KIN14E protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RIC2_SYMMI)

HSP 1 Score: 206 bits (524), Expect = 4.940e-55
Identity = 138/462 (29.87%), Postives = 228/462 (49.35%), Query Frame = 1 
Query:  424 MALEPYARDMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQSKAMSSECVSLFGDIMVYMGDKKGKDSGMQLLKNLQTRMLAATQDLRDEIFCQVCKQTTSNPDANSDLRGWQLLLSILAVATPSKALIPCFKKHCELGPVGSIPQM--YSQYVLSALQKDSSLIPRKAPPCDVEIMALVQLSAVPVLVRLQDGSKVEVMADSWTSVADLEKQIGTQIGVKALFPYTVFEVTNTDGQRALRAKERILDTVAQWR-------AQTVATSGVKKFQLLYKVRLHIRPDKDDLAGIKLTYLQAVQDLRDGIYMVSTEDSIQLAAFQLQASRGDYDKKN-CTVGSLEKELSTLAPPQILAQPKGDDFKGTKDFANKILAYYMMSLKGVSKKEARALFMGLMYEVPSFGRAYF------DGEMPGKSVVVGIGAAGVRLLDASDGDRPILAEYSFDIIASF 1761
            M +E Y    +N  RKG+  K RT ++ LLSWK + I   L    + S  M++E V  F ++  YMGD+     G      +   M+ A ++LRDE++CQ+ KQTTSNPD  S  +GWQLL+  LAV  PS  L+P    +C       +P +  +++  L  + K S L PR+  P  +E+ AL +   V +     D     + ADSWT+  + E  I   + +    P+++FEV++ + +R L   ER+LD ++ W        A+      +++F+ LYKV L    D  D + ++L Y+QA  D+ D  Y  S +D+I LAA Q+Q S GD+     CT   L  ++      +++      + +       ++   Y   L G S+ EAR  ++  +     +G  YF      + E+P +  V+ I   G+ ++D +   +  LAEY +  + ++
Sbjct:   51 MNMEQYGEKFFNFDRKGMF-KGRTTIDKLLSWKSELIKTSLR---SLSGDMATEAVQQFRNVTGYMGDRSSTKGGGDHAMKILNHMMLAPEELRDELYCQIVKQTTSNPDPFSTEKGWQLLMICLAVFPPSSDLMPHLMGYCAANLQSEVPNVAGFAEICLHRIPKISHLGPRRELPTKIELEALRRGGTVNLRFFFLDDKYCTLRADSWTTARETEDTIAKLVNITNDKPFSLFEVSSGEEERVLDPDERVLDLISFWHRSGQEDMAKVGKCGAIEEFRFLYKVGLFYDVDDSDTSAVELMYIQATHDIVDSRYPCSEQDAITLAALQMQESFGDFPASGTCTY--LRGKMGLYLSSRLIETTPSTELE------EQVYKLYK-KLSGYSQMEARLSYLDYVKSWKIYGSTYFFAEPQNNKELP-RECVLAINNKGILVVDPNT--KEFLAEYEYSNVVTW 496
[Close]
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Match: A0A2R5G8S4_9STRA (Unconventional myosin-VIIa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8S4_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.210e-53
Identity = 145/495 (29.29%), Postives = 248/495 (50.10%), Query Frame = 1 
Query:  439 YARDMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQSKAMSSECVSLFGDIMVYMGDKKGKDSGMQLLKNLQTRMLAATQDLRDEIFCQVCKQTTSNPDANSDLRGWQLLLSILAVATPS----KALIPCFKKHCELGPVGSIPQMYSQYVLSALQKDSSLIPRKAPPCDVEIMALVQLSAVPVLVRLQDGSKVEVMADSWTSVADLEKQIGTQIGVKALFPYTVFEVTNTDGQRALRAKERILDTVAQW-RAQTVATSGVKKFQLLYKVRLHIRPDKDDLAGIKLTYLQAVQDLRDGIYMVSTEDSIQLAAFQLQASRGDY-DKKNCTVGSLEKELSTLAPPQILAQPKGDDFKGTKDFANKILAYYMMSLKGVSKKEARALFMGLMYEVPSFGRAYFDGEMPGKS----VVVGIGAAGVRLLDASDGDRPILAEYSFDIIASFVCSDGVTAVMTLTAREGELKPTLVTIQSAQAPQMKSLVHAYMVR 1893
            YA   +   RKG   KK   +  LL+WKG++I   L    +   A+  + V  F +I+ YMGDK  +D     LK  +  +  A ++L DE++CQ+ KQT +NPDA S LRGW+L+     +  PS    K L+   ++  E  P   + ++ ++Y L  + K   L  R   P  +EI A+ ++S V + V L DG  +++ A+SWTSVAD+ + +G Q+ ++   P+++FE+ + D +RAL  ++R+LD ++ W R +        +FQ +YKVR      +DD   +++ Y QAV D+ D  Y  S ED+ +LAA   Q   GD+ D  +   G    EL    P +   +    + K   D   KI A     LKG   +EA   ++  +     +G A++  E   +      V+ + A G+ L+D     R I++++ +  I ++    G +++  +      ++      + +   ++ +LVHAY+ R
Sbjct:  310 YAEQYFKLTRKGFATKKTVHVADLLTWKGEKIKSSLHPLSDP--ALVHDAVLAFSNILCYMGDKPSRDPMDNALKIFKITV-GAPEELLDEVYCQLYKQTNANPDATSCLRGWELMAMCAGLFPPSSKLEKYLLSYIRQTTESQPYPGVGKL-AEYALLRIVKSLDLGARSEAPTKIEIAAVREISPVKIRVTLLDGRILDMEAESWTSVADMNQAVGNQLKIEDATPFSLFEINSNDEERALDDEDRVLDVISYWERERARQRRHPPEFQFVYKVRFFFDIKEDDEFAVQVAYHQAVHDVTDSRYPCSEEDAFRLAALMAQERFGDFIDDDSDHFGD---ELQAFLPAKYYHETIEVNLK---DEIRKIWAL----LKGYDSQEAMCNYLDYVRSWKMYGSAFYFVEPQQRDFPPDAVLAVNAKGILLIDPET--RDIISDWPYSEIVTW----GHSSITFVLVAGNLIRSQKYYFKCSVGSEINTLVHAYVNR 784
[Close]
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Match: A0A812XQK1_9DINO (Plekhh1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XQK1_9DINO)

HSP 1 Score: 181 bits (458), Expect = 6.280e-45
Identity = 149/513 (29.04%), Postives = 243/513 (47.37%), Query Frame = 1 
Query:  415 HPCMALEPYARDMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQSKAMSSECVSLFGDIMVYMGDKKGKDSGMQLLKNLQTRMLAATQDLRDEIFCQVCKQTTSNPDANSDLRGWQLLLSILAVATPSKA----LIPCFKKHCEL-GPVGSIPQMYSQYVLSALQKDSSLIPRKAPPCDVEIMALVQLSAVPVLVRL-QDGSKVEVM-ADSWTSVADLEKQIGTQIGVKALFPYTVFEVTNTDGQRALRAKERILDTVAQWR--------AQTVATSGVKKFQLLYKVRLHIRPDKDDLAGIKLTYLQAVQDLRDGIYMVSTEDSIQLAAFQLQASRGDYDKKNCTVGSLEKELSTLAPPQILAQPKGDDFKGTKDFANKILAYYMMSLKGVSKKEARALFMGLMYEVPSFGRAYFDGE------MPGKSVVVGIGAAGVRLLDASDGDRPILAEYSFDIIASFVCSDGVTAVMTLTAREGEL-KPTLVTIQSAQAPQMKSLVHAYM 1887
            HP    E YA D +N  RKG+ GKK T ++ + +WK   I   L       K + ++    F +I  YMGD+K +       + L    L A Q+LRDE++CQ+ KQT  NP+A S LRGWQL         PS      L   F +H +  G +G     Y++Y L  + K + L PR+  P  +EI A   +   P +VR+ Q   + EVM   SWT+  DL K +  Q+G++    + V+E+T    +R L   ERILD VA W+        A+   T+    ++++YKV ++  PD  D+   ++ Y QAV D+    Y  + ED ++LAA Q+Q   GD           +    TL                T D+ ++I A +  +L G +  +AR+ +M ++     +G ++F  E      +P + V + +   G+ +++     + I+ +Y +  + ++  S G + V+ +    G L K   +   S Q  ++  LV AY+
Sbjct:  207 HPTKNFEEYAADYFNLNRKGIFGKKTT-VDKITAWKADVIKTSLRKM--PGKDLETQATQCFRNITGYMGDRKTQKEDGGHAEKLMKNSLHAPQELRDEVYCQIMKQTNKNPNAESCLRGWQLFAVATGAFPPSAEFHDYLTSYFAEHMDDDGMIGR----YARYCLGRVMKSTQLGPRREIPTSMEIDACKSMK--PSVVRVFQLTGEYEVMPVTSWTTAEDLNKMMAFQLGIEKPDAFAVYELTPDMEERYLEKDERILDLVAYWQRLYEEEKQAKDKGTNVTSMYRIVYKVHVYFEPDSKDVYAEEMMYRQAVYDVVSSRYPCAEEDVLKLAAIQMQVEYGD--------AGFDLTRETL----------------TADYISRIKAEHA-ALAGNTNAQARSRYMAIVKAWQIYGSSFFFCEPQMSVDLPDE-VFLAVNPKGILIINPDT--KEIIKDYPYAEVPTWGHS-GSSFVLHV----GNLIKQDKLYFASEQGKEINELVRAYV 677
[Close]
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Match: K3X5Q9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5Q9_GLOUD)

HSP 1 Score: 178 bits (452), Expect = 3.050e-44
Identity = 160/542 (29.52%), Postives = 258/542 (47.60%), Query Frame = 1 
Query:  397 DADPEGHPCMALEPYARDMYN--TVRKGLLGKKRTPME--TLLSWKGKQITVPLTIACNQSKAMSSECVSLFGDIMVYMGDK---KGK-DSGMQLLKNLQTRMLAATQDLRDEIFCQVCKQTTSNPDANSDLRGWQLLLSILAVATPSKALIPC----FKKHCELGPVGSIPQMYSQYVLSALQKDSSLIPRKAPPCDVEIMALVQLSAVPVLVRLQDGSKVEVMADSWTSVADLEKQIGTQIGVKALFPYTVFEVTNTDGQRALRAKERILDTVAQWR---------------------AQTVATSGVKKFQLLYKVRLHIRPDKDDLAGIKLTYLQAVQDLRDGIYMVSTEDSIQLAAFQLQASRGDYDKKNCTVGSLEKELSTLAPPQILAQPKGDDFKGTKDFANKILAYYMMSLKGVSKKEARALFMGLMYEVPSFGRAYF------DGEMPGKSVVVGIGAAGVRLLDASDGDRPILAEYSFDIIASFVCS-DGVTAVMTLTAREGELKPTLVTIQSAQAPQMKSLVHAYMVRYVL 1902
            D   E HP  A   +AR  YN  T  K  L  K  P++  + L W+   IT PL       K      +  F +I  +MG++   KG+ D   +LL+N+  R    + DL++EI+CQ+CKQ T NPD N+ L GW LL + L    PSK L P     F +H  + P   I  +Y+   + +LQ       RK  PC +EI AL   S + V+V L DG+ +++   +WT+  +L K +  ++G++    + +FE ++   +R + A ERILD  A W                      AQ   TS  + ++LLYKV L I  D + +  I L YLQAV ++ +GIY+ + E  I+LA++QL    G Y      V     E+    PP IL+             A+++LA +    +  S  E +  ++ L   +  +G A+F      + +MP   V + +   G+ L+   + + P LA+Y +  IAS+  S +    V+T   ++  ++  L T   +    +  ++ AY V+Y++
Sbjct:  141 DVPTESHPLFA---FARKYYNLTTTTKSCLFSKSKPLDLRSRLYWESGLITTPLI---ELPKHQMKIALQAFRNISGFMGNRSSGKGQIDHCFKLLRNVAPR----SPDLKNEIYCQLCKQLTGNPDMNAVLNGWLLLNACLITFPPSKELSPYLEQFFAQHA-VAPETEIA-LYATDAIHSLQSCFQKGERKELPCPMEIHALRDHSLIEVIVSLVDGTPIKISVSAWTTCGELSKTVSQRLGIRKTQAFALFECSSRHEERVIEADERILDLYALWERIGIEKAGKPGKKNKTNSNNSAQKETTSE-RTYKLLYKVYLWIDFDDELVEEINLVYLQAVHNVVNGIYVATLEKCIELASYQLYCKHGIYQSDR--VIDFVSEIDQYIPPNILSPVN------RAQLADQVLAAFAAQ-RDNSVHECKWSYLRLCKTLRFYGAAFFAVHNTRNPKMP-TDVALAVHYRGLTLVSV-ENEAP-LAQYLYVDIASWGYSANSFVFVVTQGNKDDNVEHVLKT---SAGKHINDIIAAY-VKYIV 653
[Close]
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Match: A0A7S2WK49_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WK49_9STRA)

HSP 1 Score: 176 bits (446), Expect = 8.710e-44
Identity = 105/323 (32.51%), Postives = 175/323 (54.18%), Query Frame = 1 
Query:  424 MALEPYARDMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQSKAMSSECVSLFGDIMVYMGDKKGKDSGMQLLKNLQTRMLAATQDLRDEIFCQVCKQTTSNPDANSDLRGWQLLLSILAVATPS----KALIPCFKKHCELGPVGSIPQMYSQYVLSALQKDSSLIPRKAPPCDVEIMALVQLSAVPVLVRLQDGSKVEVMADSWTSVADLEKQIGTQIGVKALFPYTVFEVTNTDGQRALRAKERILDTVAQWRAQTVATSGVKK---FQLLYKVRLHIRPDKDDLAGIKLTYLQAVQDLRDGIYMVSTEDSIQL 1371
            + +E Y ++ +N  RKG  GKK T ++ +LSWK  +I   L    +   A+  + +  F +I+ YMGDK  K+  +     +    + + +DLRDE++CQ+ KQTT+NPDA S LRGW+LL     +  PS    K L+   ++  E  P   + ++ +          + L PRK  P D+EI ++  ++ + + + + DG+ + + A+SWT++ +L  Q+   + +K   P++ +E  N D +RAL   +R+LD +A W  +  A    K    FQ +YKVRL     +DD   I++ + QAV D+ D  Y  S EDS++L
Sbjct:  280 LKMENYVQEYFNLNRKGW-GKKATTVQKILSWKTDRIRTSLHPLSDP--ALVHDAILAFQNILCYMGDKPSKNP-ISNANRIFRITVQSPEDLRDEVYCQLVKQTTNNPDATSTLRGWELLAMCAGLFPPSSKLEKYLLSYMRRTTENQPYPGVGKL-AXXXXXXXXXXTELGPRKEVPTDMEIESVRSITPLTIRIHMLDGAIIPMEAESWTTIKELNDQMAKHLRIKDKTPFSTYEHNNRDEERALDEDDRVLDIIAYWDREARACKRAKDVPHFQFVYKVRLFFDIKEDDETAIEVAFHQAVHDVTDSRYPCSEEDSLRL 597
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTX7_ECTSI2.960e-17978.65FERM domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LTX8_ECTSI2.680e-15979.15MyTH4 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5JSV5_9PHAE4.160e-6568.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9UDD6_9STRA8.840e-6032.02Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2F2Z0_9STRA3.590e-5629.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A812RIC2_SYMMI4.940e-5529.87KIN14E protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A2R5G8S4_9STRA3.210e-5329.29Unconventional myosin-VIIa n=1 Tax=Hondaea ferment... [more]
A0A812XQK1_9DINO6.280e-4529.04Plekhh1 protein (Fragment) n=1 Tax=Symbiodinium sp... [more]
K3X5Q9_GLOUD3.050e-4429.52Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2WK49_9STRA8.710e-4432.51Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:302752..314181 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTX7
Preferred namefrmB
PFAMsFERM_M,FERM_N,MyTH4,Myosin_head,PH,SH3_2,WW
Model size1989
Max annot lvl2759|Eukaryota
KEGG koko:K10359,ko:K10361,ko:K21868
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0010810,GO:0030155,GO:0031156,GO:0043900,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050793,GO:0065007
Exons10
Evalue4.86e-180
EggNOG OGsCOG5022@1|root,KOG4229@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_003960.1
Descriptionmotor activity
Cds size1989
COG categoryZ
BRITEko00000,ko03036,ko04131,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.100.1prot_P-littoralis_Contig142.100.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig142 302752..314181 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789667.7918634-CDS-P-littoralis_Contig142:302751..3029641680789667.7918634-CDS-P-littoralis_Contig142:302751..302964Pylaiella littoralis U1_48CDSP-littoralis_Contig142 302752..302964 -
1680789667.8029983-CDS-P-littoralis_Contig142:303567..3037711680789667.8029983-CDS-P-littoralis_Contig142:303567..303771Pylaiella littoralis U1_48CDSP-littoralis_Contig142 303568..303771 -
1680789667.8118448-CDS-P-littoralis_Contig142:304256..3043581680789667.8118448-CDS-P-littoralis_Contig142:304256..304358Pylaiella littoralis U1_48CDSP-littoralis_Contig142 304257..304358 -
1680789667.820851-CDS-P-littoralis_Contig142:305003..3050901680789667.820851-CDS-P-littoralis_Contig142:305003..305090Pylaiella littoralis U1_48CDSP-littoralis_Contig142 305004..305090 -
1680789667.831427-CDS-P-littoralis_Contig142:305424..3054961680789667.831427-CDS-P-littoralis_Contig142:305424..305496Pylaiella littoralis U1_48CDSP-littoralis_Contig142 305425..305496 -
1680789667.8443184-CDS-P-littoralis_Contig142:306398..3065271680789667.8443184-CDS-P-littoralis_Contig142:306398..306527Pylaiella littoralis U1_48CDSP-littoralis_Contig142 306399..306527 -
1680789667.8590214-CDS-P-littoralis_Contig142:306947..3070551680789667.8590214-CDS-P-littoralis_Contig142:306947..307055Pylaiella littoralis U1_48CDSP-littoralis_Contig142 306948..307055 -
1680789667.8780382-CDS-P-littoralis_Contig142:307848..3080071680789667.8780382-CDS-P-littoralis_Contig142:307848..308007Pylaiella littoralis U1_48CDSP-littoralis_Contig142 307849..308007 -
1680789667.887215-CDS-P-littoralis_Contig142:308429..3086211680789667.887215-CDS-P-littoralis_Contig142:308429..308621Pylaiella littoralis U1_48CDSP-littoralis_Contig142 308430..308621 -
1680789667.8989198-CDS-P-littoralis_Contig142:313458..3141811680789667.8989198-CDS-P-littoralis_Contig142:313458..314181Pylaiella littoralis U1_48CDSP-littoralis_Contig142 313459..314181 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig142.100.1

>prot_P-littoralis_Contig142.100.1 ID=prot_P-littoralis_Contig142.100.1|Name=mRNA_P-littoralis_Contig142.100.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=663bp
MEGLPQNYRDNITVDNGVEIVWVNQKGQVIQKDNGSTSSSAAAEDDGDVV
VGMPRVASIRKVEVGAEANNNSSNSPASPGGTRRSSVAGTVSYSLIGTWF
TNGPDGGGGGGGAGVTPGSPGGSASPLETEEDDADPEGHPCMALEPYARD
MYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQSKAMSSECVSLF
GDIMVYMGDKKGKDSGMQLLKNLQTRMLAATQDLRDEIFCQVCKQTTSNP
DANSDLRGWQLLLSILAVATPSKALIPCFKKHCELGPVGSIPQMYSQYVL
SALQKDSSLIPRKAPPCDVEIMALVQLSAVPVLVRLQDGSKVEVMADSWT
SVADLEKQIGTQIGVKALFPYTVFEVTNTDGQRALRAKERILDTVAQWRA
QTVATSGVKKFQLLYKVRLHIRPDKDDLAGIKLTYLQAVQDLRDGIYMVS
TEDSIQLAAFQLQASRGDYDKKNCTVGSLEKELSTLAPPQILAQPKGDDF
KGTKDFANKILAYYMMSLKGVSKKEARALFMGLMYEVPSFGRAYFDGEMP
GKSVVVGIGAAGVRLLDASDGDRPILAEYSFDIIASFVCSDGVTAVMTLT
AREGELKPTLVTIQSAQAPQMKSLVHAYMVRYVLPRQNKEEAENKRKKAE
AENSVVPFSAGA*
back to top

mRNA from alignment at P-littoralis_Contig142:302752..314181-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig142.100.1 ID=mRNA_P-littoralis_Contig142.100.1|Name=mRNA_P-littoralis_Contig142.100.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11430bp|location=Sequence derived from alignment at P-littoralis_Contig142:302752..314181- (Pylaiella littoralis U1_48)
ATGGAGGGTCTGCCGCAGAATTATCGAGACAACATCACGGTCGACAACGG
GGTCGAGATCGTCTGGGTGAACCAGAAAGGACAAGTAATCCAGAAAGACA
ACGGGTCAACTTCCTCCTCCGCGGCGGCCGAAGATGACGGTGATGTAGTC
GTCGGCATGCCTCGTGTGGCCAGCATCAGGAAAGTGGAAGTGGGGGCGGA
AGCAAACAACAACAGCAGTAACTCCCCCGCCAGCCCCGGCGGCACACGCC
GCAGTTCGGTCGCCGGCACCGTATCGTACTCCCTCATCGGAACGTGGTTC
ACCAACGGCCCGGACGGTGGGGGTGGGGGCGGGGGCGCGGGCGTGACCCC
TGGCTCCCCCGGGGGCTCGGCCAGCCCGCTCGAGACCGAGGAAGATGACG
CCGACCCCGAAGGCCATCCCTGCATGGCCCTCGAGCCCTACGCCCGTGAT
ATGTACAACACCGTTCGGAAGGGGCTACTGGGGAAGAAGAGGACCCCCAT
GGAGACGCTGTTGAGCTGGAAGGGAAAGCAGATAACGGTCCCCCTGACGA
TTGCTTGCAATCAGAGCAAGGCCATGTCCAGCGAGTGCGTGTCGCTGTTC
GGGGACATAATGGTGTACATGGGCGATAAAAAGGGCAAGGATTCCGGCAT
GCAGCTCCTCAAAAACCTCCAGACGAGAATGCTGGCTGCGACCCAGGACC
TACGGGACGAAATATTCTGCCAGGTACGTAAACAGACGATTGCAGCAGTA
TACGCGCGCGGGGGTGGACGAGGGGGCGGGGGGGGGGGGGGGGTCGAGCG
TGCGCTGGGTAGGCCTGTCTACCTGTCTGTGTTCTGTATCCCGTGTGCAC
TTTGGTGCAGCACCGCTTTCGTTTGGCGAATGGATCCCTATCCCGTACAT
ACTGCAAATTGTGTGCGGAAAGTCACGCATGCGGGGACTAAATCAAATAA
TGTACTTTGCAACCCTTTGCTCGCCATTACTTTTGGGACACTTTACTGCG
TATATTGTAGAGCTGTCAGCTTATCACCAGCTGTCAGCTTCCCAGATGTC
CGCACCTTCGTGCTGGTCGTTACTACCGTCGTTATGTTTATGCTTCGCAA
GCGCGACCAAATCCGGTAAAAGCGGGGCTCTCGGGCGACAGCAAAGTAAG
AGCAACTGACTTGTTGCGATCATACGAGTGCAGCACCCTGTTTCGAGTCA
CTGTGTGTTATGTTGGTGCAGATTCGGCTCAATTATTTTAGCATCGGACC
CCCACTTCTTTTTTAAACGCAATTGTGAATTTTGAGAGTCAAAGTTTGCA
GAGTACCCGGGGAATAGGAAGCCTCGATTTTATCGAGAAAAGGAAAACAC
TTTAGTACGTGACAGCCTACCTTGCCCCCTTATTACATTTAACGACTCCG
TCAGAGCATTAGTCGACATCCGTGTCTGTGGCGAGTAAATACATAATATC
GTATTTGTTATTTAAAAAAAGTGCACAGGGGGACAGGGGGAAGAGTTGAA
ATTAAAACCAAATGGGCAGATCCCCCCCAAATCACGAAAATGTTTTGCTG
TTATCTCCTACAAACCTCGGCCAAATGAAACTGAGGTGTGCGAGGTGTAT
GGTGGAGCTCGTCGACAAGATTCCCTCAGTGTTAACTGAGGGGTACTTAC
GGAACGGTAAAACATTTTGATGTAAGTACCTGGTATGTATGTATGTATGT
CGGTCTCAGACGGAAGCTCCAAACCACGAAAAAATTGGAAAAATTGGAGC
CGGTCGAGTGCGACACAACCGGCGAGCTCAGTGCACGTCTAAGACGATCT
CAGAGGCCTCCAGAAAGTTTTAGCTCAGTTGGTGCTTCCTTGGCCGAGTT
TGCAGGCGCTGGTCGTTTGCCAAACGCTTTCTTTCGCTTCGACAATAGAG
AGAGAACAAGAGGAATATTGACTCTTATACAGATAGATGTAATTGCGCCG
TATGTACTTCGTAGCATTTTGGCCTTTCTTTACTCTCAGCCAGCATCGAA
GCACGTGACGCGGAAGCGGGATAAAATGAAGCGATAGGATCATGAAGCGA
TATGATTATGATTTTTGGGCTTGAAGACCCGTGACAGTCTGGACGCGATG
CATCGGTATAATCAGTGCTGCAGGGGGTATTTGATGTTGTGTATTCGTGG
GTTTGCATGCAGACGCTTGCCGTTAGCCAAATGCGCCCTTACGTTTCCAC
AGCAGAGAGAGAGCGAGAGAAAAGACTGCGCCGAGTCTGCAGACGCTAGT
CGTTCGTCGCCAAACAACGCTTTCTTACGTTTCGACAACAGAGAGAGAAC
GAGAGAGAAAAGACTGCGTCGTGCATAGAAGATATAATTGCGCCGCATGG
AGTATTTTGGCCTTTCTCAGCCAGCACCGAAGCATGTGACACGCAAGTGG
GATCAACATGAAGCTAGATAAGATCCCGGGATCCAAGAATCATAACTTGG
CCATTCTTTGCCGTAGAACACGCTCTTTTGGCATGAATTCATGAGATAGA
TGTGGTCTGACATGCGGCCCGACATCTTTCGTTTCGACTACGTACGTCCG
TCCACAGTAAATATTAGAGTGTATGTAGTTAGTTGTGAATCTACCTGTAA
ACGGGTTTGATTTGATTATTGATTATTCCGGATATGATACGCTGATTTTT
TATTTGCTTGATTATTGTGATTATAATCGACCGGGGTTGATTAGTTGACA
GGGGTAGATTATAAGGTGATTTATCAAATTACTACAGTAGTACATGAAAT
TTAGTGTTGAGCAAAAATATGTAAAGGAAATAGCATACGAAGTGCGTTAT
TTCGCATGCATCTCCGGGTGTTGTATGTGGTCTACAGAACAGGTGGGATA
GATAGTAGTTAGCGTAGATCGAGAGTTCGTTGCGATAACACATCACGTAA
TAAAGCAGTAAGAGCCGCCGACAGAATACAGGATAATAAATGGTCTGCAA
TAATACTACAAAGTGTAAAGAGTGTAGACTTTACTACTTCGTACACACGG
TATGATGGGACGAAGTACGCACAGCACGTCGTTCTATCTAGTGTACAACA
ATTAAATATAGCCTACACAGACAAGTATACAGCAGTATATTATGTATAAA
GAAGTAGTAGCAGTGTCTTCAGGGAAAAAGTTATGAAGAAGGTTTTACAA
GCTTAATAAAGTAGTACACATACATCTGATGTATAACAACACATTGGATT
TGGTATAGAGCTGATTGCTTCGAAGTATAAATAACGCAACGCTGTGTGTT
GTGTGCTGTGTAGTGTGTAGCATTGTTGCGCGCGTGTGCGTGCGCCGCGT
GACACATCGTCAGTCGTTTCGCGTGTGATTGCGCCGCGCCGCAGGCAAAT
TGTAAGCCGTTCCACACTGCAAACGCCTCTACTTTTTTGCTCCTAAAACA
ATCAACAATAATTAATACCAGGTAGACTAAGAATCAAATAATAGTTTATT
AATCAAATAATCATGATAATTGATTGTTGTTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTCTCTTCACATTAAAAACCATTCCGATCTCTCCTCAG
TACCTTCTGACGTCCGTACTCCACCGATCAGGGACGATTTCCGTGGTCAC
AGGCTGCTTGCCCCCAAAAGAGAGGTACTTGTATATAGTACGCGGGGGAG
ATCCCCTCAGTCCACCAAACAAAGGCACGACAAGGACACTCCAGGCAAAA
CAAAAACGGACCCCGAGGAATCTCACAACGCTGTACAAAAATAGAAAAAG
AAAAGGGGAGCCAGGTCCAGAGCCAGGTCACAAAAAGAAAGTCAAAATCA
ACAAAAGTCACAGAGTGGCAAAAATACTTGTAATCAATCATTGAAAATGT
TGAGGTGTTGAGATAAATGTCACTGTATGTAGTCTAATCAAATCAATCAT
CATATCAAATAATCAGCACTTTTCAAGTTGATTCACAACTCTAGTCGACA
AACCCAGAACGCTCCGCGGGTGGGTGCGATATTGCAGAACAGCGTCTGTC
TGTCTGAATTATCTGCCGCAGGATATCTACATGTTCGCTCGCGGAACAAT
GCCTTCAACACATCCATCCGCCGCCGCCGGCGATGATTGTGCTTGGGCAT
GACGTTTGCGTTACACCCACCGCTCTCTGTTGTTCTGTTTATTCGAGTCG
CTCTGTGTGCGATGGCATCAGACCACACTTCGTTTTGCTTCACGCCTTCG
CACATCAATGTACATCATGTCACATTGGCATCATGTCCAGCCCGTCTTTG
TGCGTTCAAAGACAAAGCGTCACACAAACGTCGCGTTACCCTAGAAACTA
AGAAAAAACGCTGAGGGAAAAGCACGCGGCACGACCCGCACGCCTTCGAC
AATGTGTCAAAAACCGGCGTCAAAAACAAAATGAGACCGCTTATTACCGC
AATCATGCGAGTCATCGCACCGGGGTGCGATCGATCTTGAAATGTTTCTT
TTTTGTGTTTTTTATCGCACCCCGGTGCCATAACCCCGATGGGTGCGATA
ACCCCGATGGGGGTGCGCAAACACAATTAACTCATGCCGTTCTTGGTATT
TACGCACCCCCGGTGCGATAACGCCGTTGGGTGCGATGCTGAATCGTAAT
ACACCGGGCCATACCGGTACTTGGGGCAACGGTGCCGCACATTTGCTTGT
TGTTTTTTTGCTCGCTGAATCGCTGAAGGAAGGGTACGGTATCGGGCCGA
AAGCGAGTTGGGTTGCGGCGTGTGGCAATAGGACGAACAACGATGCTGCG
GAGTGTTGCCTACCGTAATGTCACGTATGATACAATATCGGTTTGTCGTA
TCGGTTAGTGTTGAAAAACTCGATTCTCTTTGTCGTTCTTATCGCTTCGG
ATGTACCGTATGCACTCTATCCTACGAGCTTTTGTGGTTTGTTGGGTTGA
CAGCATATAAGACGATTGACGTGCCGTACTTGGACGCGTGAACTGCGTCA
GTTCAATAATAATGATACGTGAGTTGATCTTTCACCGAACGTAACTTCAA
AAGACATGCATACGGCCCGTTGCGGCAGCACTCAATCTTGGATTTATGTC
GGGGTTATCGCATCGGGTGCGATAACCCCGATGGGGGTGCGAAAATGCAA
TTAAATGTTTATTTCTTGTGTTTTTTATCGCACCCTGGTGCCATAACCCC
GATGGGTGCCAAACCTCCGATGGGTGCGATGACTCGCATGATCACGGGAA
TATCGGTATCAAAATGAAACCGCTCATGAATCGGTAAAAAGAACTCTGAA
AAAATGTGAAAAAAAAATCAGAATTTCGAGTTTGTCGTTACCAAAAACAA
CGAAGAATTATCTGATCTACCAGTGGATATTTGTTGACCCCTTAAGCAAT
GTTTACCTTCGTCATATTCCATGGCATCGAGGGGCAATTCAGTCCCTCCA
AAACTATTTCGCTGCTGCTGGATCCGACCACGAAGAACAAGTTTAACCTG
ATGAACATGATGGCACACGGTGAAGCTCGCCGACAGGTGCGAATGTAGCC
AAACCAGCTTCGCGCTTGTGTATAACTCGTTCTATTGCTGTCCTCTTCTT
CTTAAATTAGGTATGCAAGCAGACCACGTCAAACCCGGACGCAAATAGCG
ACCTGCGTGGGTGGCAGCTACTCCTGTCTATCCTGGCCGTGGCGACGCCG
AGCAAGGCCCTGATCCCGTGCTTCAAGAAACATTGCGAGCTGGGACCCGT
GGGCTCGATCCCTCAGATGTACTCACAGTACGTGCTGTCGGCTCTGCAGA
AAGTGAGTAGAAGATGGTTGAATCTGTCGCGAGCTCATCGTGACCACAAG
AGGAGAAGTTTGTAGTGGTCGGTGTGGTGTGCAATAAGAACGGTAGGAAG
GGAGTAGTTGCGCCGAGAAGACTTGATTAGGCACAACAAAGCTGTGTGGA
GGGAGGCGAGATGGTAATGAACGAGGTATATCAGCAGCAAGAAAAAAGGT
CAGAGTGCTCCCCCCCGAGACCCGCCTCCGGCTTTGCGCAGCAGCAGTAT
TATCGTGGAAAGGGGGGAAGGTTATATCGAGACCAAAGGGTATCCATTAT
TGCACATGAATGTTCGTTACTCTTGCCTAGCTGTAACCAGATTTTTCGTT
CGTGCCTCTCCTCTCGTCCATCCCTGACCTTTCCTCTTCCTCTTGCTCTT
TGAATTTCTCTCGCTTCTCTCCAGGACAGCTCTTTGATACCACGAAAGGC
ACCGCCATGCGACGTCGAGATCATGGCCCTGGTGCAGCTGTCGGCCGTGC
CTGTTCTGGTGCGCCTTCAGGACGGGAGTAAAGTGGAAGTCATGGCGGAT
TCCTGGACGTCCGTGGCGGACCTGGAGAAACAGGTTTGAGCTGTTCTTTG
GATTCGTTGGAAGGAACCCACTCGCGTATACACTTCTTGTCAATACGAGT
GAGTAGAGTGTTAAGAGGTGTAGTCCTCGCTGCTTGAACCTAAAGCATCT
GAAGAAGAAGTACCTACAGCGCCACGCTTGCTTGGGTTTGTTTTGCGTGC
GTACGGTGGGTCGAAAAAGCTGGAGAGACTGTTTTTACCTGCTGCACTAT
CACACTGTCGTAGACGGAATCTGTCCGGGGGGGGGGCGAAAAGTATCCGA
AACGAGTGAAATCATGGATCTTCTGCTTTCAGTCAAAGTGGCCTTCCCCC
AGTTCACTTCAGTCCGTGTTCACTATCTCACTGCTTGCAAACAAAACAGT
TCAGTAGAGGATGTGGGACCGTTTCAGCAAACCCACTACTACTGGTCTCA
GTTCGTTCGTGCTCGGTCACTATCAGCAAACCCAGTCGTGCCAGTTCAAC
TCCTGGGAGAATCGTAAGGTTTACGTTCCGCAGGGGGCAGACAATGCAGC
TGACGTGCAACGCGAGCGATCAGGTTTGGGGGGGGATCACTACAAGAAGG
CTCAACAAGCCGGCGAAATAAATGTCCACTGCCGTGAATGTATATTTCAC
TGACACCCACCAATACTCCTTCCGATCTTGACTCCTCCGAATCCTGCTTG
ATAGGCAACCCAGTACAGAAAACAATTTTTGAAGCCCTTCGACGAAATAA
AAAATTGTGCCCGAGGCTCGACGCATCCTGACGTTGATGCTTGGAACCCC
TGCTACCATTGTTGACCTCTCGCTAGATTGGAACGCAGATCGGTGTGAAA
GCCTTGTTTCCCTACACGGTGTTCGAGGTCACCAACACGGACGGCCAGCG
AGCCCTCAGAGCTAAAGAGCGGATATTGGACACGGTAAGATCACAGGAAA
AAAAAATTACATGAAGAAGAAGCAACTGCAGCAGCAGCAGCAGCAGCAGC
GCAGTGCCCCTACCCTTGTGGAGAACATAACATTGTACATTCATTCGGAG
AAATACCAGCGATGACGTGTTCACCGACAGATATTACGGCCAGGAACCTT
AAAGACCGAGGAAAACACGTGCTGTCCACGGTCGCCTGTCTGATTGAATG
GTTTGGTCTTTACTTTTTTTTCAATTATCCAAATTGCCCTCTCTTTTATC
ACCATTCTGTTCTGCGTTCTGTCCGTCTTAATTTTCTTTTTTCATCTCTA
CCGTTCTACCACGTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGACT
GTCTTTCTCGTGTCTGGTCGAACTTTAATCTGCAACAACAACCAACATGG
GTAGGTTGCTCAGTGGAGAGCACAGACCGTCGCGACCTCGGGGGTAAAAA
AGTTCCAGCTGCTGTACAAGGTGCGACTGCACATTCGTCCCGACAAGGAT
GACCTGGCGGGAATCAAGCTCACCTATCTCCAGGTGGGTGGGTGGGTGGG
CGCGACCCCTGTGTGGCACGCACGGCTTGGTCATGCTGCACCGTCTATCT
TTGTGGCACTTTTTTCATGGAATGCTATGTGAGGCGGTCGGCCAGTCGGA
GGTGTGTATCTGTGCTGGACAACTTGGCGGGGGGGGACATCGTTTCACCA
GGACGGATGGGAATTGAAAGGTCTGTGCCCGCATCCTGCGCCTCCGTCTT
TCATGGGACTGTTTGAAAAATGCTGGAAAAATAGACAACTATTATGAAAA
GAAATCTGCCTTCGACGGACGTTGTTTGAGTGTGCCCTTTGAGAAGGTCA
CCCCCCCCCCCTCCACCCCCCCACCCCTTTTTGAGACTTTTGTTCATATG
TTCCAGGCGAGAAGTCTTGCGGGGGTAACTGAAACTGAAACCCGACCGGA
AGGCGACGAATCATTCCGTTTGCTTCAAAACCTTTCGAGCCATGTTTGCG
TGGGTTTGCTACGTCCACCACGTCTTCGAAAGTTGCTCACGGTTCGAATC
ATCTGCACTTCCGTCCCCCCACCATTTTGTTTTTTTTTTTGGTTTCTCAA
ATGTTCTTCTTCGAAAAAACAAATCGGAAAACAAGTTATATGTGGCAGGA
AGCCATCCCGGGGCCTAGCCGACCTTAGTGAGACTTTTTCATCGTGGACG
CTGGCGTGAAAATAAGTTTTGTCTCTAATGGACGTTGTGTGAGTGTACCC
TTTCAACGTCGTTTGGGTCGGCATCGGTGACTGCTAATATCAAAGCATGG
CGTCTGCCCAGCGGCCCAGCCTTCGACCACGTACGCTAATCTCACCGCTA
TTCTACACATTTTTCCCTGTCTCTCACCCCACCCGCCCGCCACACACACA
TCACAAACACTCACCCGTGACAATACATCGTTCAGGCGGTGCAAGACTTG
CGCGACGGCATCTACATGGTGAGCACGGAGGACAGCATCCAGCTGGCGGC
ATTTCAGGTGGGAAGATAAACCGAGGTCTTACGCACCAAGCATCCCTCAG
TTGGTTGCTTCCCACAGCTACTCAGACTTCTGGTCTGGTTCGGTTCGGTT
CGGTTCGGTTCGGTTTGGTTTGGGTTGATTTTTGGCTGGGCTTGGTCTGG
ATCTCGTTTCGTTTCGAATCGAAATACTCCTGCTTTGCGACTGTCGGTAG
ATTCACCTGGTTCTTCCCGCCCCGAACGAATTCTCTGTCGCCACAAACAT
CTTTCTGAGCCCTATATTTTTCTTTCATGGGGGCGTGCACCCCCCCCCCC
CCCCCTCTCTCTCTTTCTTCTGCCCGTTGGCCGACCAACAGTTACAAGCG
AGTAGAGGCGACTACGACAAGAAAAACTGCACCGTCGGGTCCCTCGAGAA
GGAGCTCAGCACTCTCGCTCCGCCCCAGGTAGATCTGGCTCCTCAACGTC
TCGTGTACAGGAGCACATCTCACTCGAACACTCCGTGTTCCCGTGAACAA
ATTGTCAGCGCTGAGTGAGGCCAATATCGCTCGTTTTTTGTGCTACAGAC
AGGCATGATGCTGTGCTTTTCACCCGGTTTTCCTTCGCTGTTACCAGTAG
TAACATTCACCCGACGCCCGCATGCGCAATAATTCCCATCCCCAGGATAA
CTTGCAGAATTCGCTCAGGGCTGCCCCAGAGTAAGACCGATAAGCAGCTC
TCTGGTGACTCGGTAGGTAGAGGGTGTGCCTTGATACAGACCGGCGAAAT
CCCGATACCCTAACACCACACTCCCCTACGTTCGAAAAGGGCCAAGCCCT
CCCCTCCAAGCATCCCCGAAAGAGCACCACCTCTGTACGTTAGGTCGGCT
ATTAGGTGTGCAGCGTGTGAATTGGTTCTCCGCTCTACAGCAGTTCATGC
CCGTGCGAGTGCCTAGCCAGGAACGAACGTTGTCAGCATTCGTATTGTTC
CCTGTAATTTTGTGTCTTGTCCGCGAAAGGGACGGCTTAAGTTAAGGAGG
TTGTTTGCGGTGAATCGGCCCTCCTTATTTTTTTTTGCCCTCTGCCGTCT
ACGCACACATGAGCACGCCACAGATCCTAGCCCAGCCGAAGGGCGACGAC
TTCAAGGGGACAAAGGACTTCGCCAACAAGATTCTGGCTTACTACATGAT
GAGCTTGAAAGGGGTCAGCAAGAAGGTGCGAGCAACACAACATGAGTGAA
ACACAACGAGTGAGTGAAGTTTCAAATCTCACCAAATTCTGGGTCGCTCC
CCCCTTCCGCTCCCCCCCCCGGTTAGTTTCTGAAGAATACAAAAAGAGAG
GCAAACCGTCTCGGAGTGTTCCAGTCTCGGAAGTTCGTTGCTCCCCTCGT
AGTCCGACGGATATCTGACTCTTCCTTTTCGGCGGGGAAGTTGTCGACCC
TTGACCCTACGGTATCCCCTTCGCCACTCCACCTCGTGTTGGACTATCCT
TACTACATCTCCGGAACGACAACATTGCCCGACCCGTGGTCGTGGGCCGA
AACGACCGCTCTCCCGCGGGATATCCTGAGGCTGGCAGTGTCTACAGAGC
GCAGGGTAGCCAAGGTTAACGACAACAAATTCTCGTCACACCTCACACAT
TAAAAGACACCGTTGAATCTATGGAATGATGTGTGTCCTTCGCTCGCCAC
ACGGCCACAGGAAGCAAGAGCGCTGTTCATGGGTCTCATGTACGAGGTGC
CCAGCTTTGGGCGGGCGTACTTCGACGGGGAGATGCCGGGAAAGTCGGTC
GTGGTCGGCATCGGCGCCGCCGGGGTGCGGCTCCTCGACGCGAGCGACGG
GGATCGTCCCATCTTGGCGGAGTACTCATTCGACATTATTGCGTCCTTTG
TTTGCTCTGACGGGGTGAGACAGACAGCAAAACAAGACGACGGTTATGAT
ACAGTGAATGAGCAAGGTGTTCCGCAACAATGCGTTTTTTAGTTTCTCGC
GCTTGGTTGTTCACTTTCACTCACTCGGGTACACGTATATATGACATGTA
TTGTATACTTCGAAGCACGTATACACCACGTCTCTGTTGTTGCTGCTGTC
ATTCTTTGGGTTGGGAATGTTTTGTCTTCCCTGTGTACAAGGAGACAATT
ATCACGAAGTCGTTCATTAGCGTGCGTTTCCTTTTCCCGTTGTTGTTCGT
TTCATTTCCTTGTCTGGCGAACAGGGACAAACTTTCGGGTGTGAAATTGT
CGGACGAAACCGCCTTTCTTTCTCCCCTGTGTTGTGACTTTGATAACACG
ACACGGGCGAGAGATAACAGTCATCCACAATGACGAAATTATGCGAAGGG
GGAGTCAACATGACTGATAAAATATATTTAAGTTAGCCTTTACTCATATT
ACTCCGACGGGTGTCTCTCATTCATGATGGGCTAGAGGAAATGGGTGATG
ATCACATTATATGTGATTGCCAATTAAAAAAAAAACTTCTGACACGAGAG
CAAAAAAAAAAAAACAGGTTACGGCGGTTATGACGCTGACGGCCCGGGAA
GGGGAATTGAAGCCGACGTTGGTGACTATCCAGTCCGCGCAGGCGCCGCA
GATGAAGAGCCTGGTGCACGCTTACATGGTGCGGTACGTGTTGCCGAGAC
AAAATAAGGAAGAGGCCGAAAACAAGAGAAAAAAGGCGGAGGCGGAGAAT
TCTGTGGTCCCGTTTTCGGCTGGAGCATGA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig142:302752..314181-

>mRNA_P-littoralis_Contig142.100.1 ID=mRNA_P-littoralis_Contig142.100.1|Name=mRNA_P-littoralis_Contig142.100.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1989bp|location=Sequence derived from alignment at P-littoralis_Contig142:302752..314181- (Pylaiella littoralis U1_48)
ATGGAGGGTCTGCCGCAGAATTATCGAGACAACATCACGGTCGACAACGG
GGTCGAGATCGTCTGGGTGAACCAGAAAGGACAAGTAATCCAGAAAGACA
ACGGGTCAACTTCCTCCTCCGCGGCGGCCGAAGATGACGGTGATGTAGTC
GTCGGCATGCCTCGTGTGGCCAGCATCAGGAAAGTGGAAGTGGGGGCGGA
AGCAAACAACAACAGCAGTAACTCCCCCGCCAGCCCCGGCGGCACACGCC
GCAGTTCGGTCGCCGGCACCGTATCGTACTCCCTCATCGGAACGTGGTTC
ACCAACGGCCCGGACGGTGGGGGTGGGGGCGGGGGCGCGGGCGTGACCCC
TGGCTCCCCCGGGGGCTCGGCCAGCCCGCTCGAGACCGAGGAAGATGACG
CCGACCCCGAAGGCCATCCCTGCATGGCCCTCGAGCCCTACGCCCGTGAT
ATGTACAACACCGTTCGGAAGGGGCTACTGGGGAAGAAGAGGACCCCCAT
GGAGACGCTGTTGAGCTGGAAGGGAAAGCAGATAACGGTCCCCCTGACGA
TTGCTTGCAATCAGAGCAAGGCCATGTCCAGCGAGTGCGTGTCGCTGTTC
GGGGACATAATGGTGTACATGGGCGATAAAAAGGGCAAGGATTCCGGCAT
GCAGCTCCTCAAAAACCTCCAGACGAGAATGCTGGCTGCGACCCAGGACC
TACGGGACGAAATATTCTGCCAGGTATGCAAGCAGACCACGTCAAACCCG
GACGCAAATAGCGACCTGCGTGGGTGGCAGCTACTCCTGTCTATCCTGGC
CGTGGCGACGCCGAGCAAGGCCCTGATCCCGTGCTTCAAGAAACATTGCG
AGCTGGGACCCGTGGGCTCGATCCCTCAGATGTACTCACAGTACGTGCTG
TCGGCTCTGCAGAAAGACAGCTCTTTGATACCACGAAAGGCACCGCCATG
CGACGTCGAGATCATGGCCCTGGTGCAGCTGTCGGCCGTGCCTGTTCTGG
TGCGCCTTCAGGACGGGAGTAAAGTGGAAGTCATGGCGGATTCCTGGACG
TCCGTGGCGGACCTGGAGAAACAGATTGGAACGCAGATCGGTGTGAAAGC
CTTGTTTCCCTACACGGTGTTCGAGGTCACCAACACGGACGGCCAGCGAG
CCCTCAGAGCTAAAGAGCGGATATTGGACACGGTTGCTCAGTGGAGAGCA
CAGACCGTCGCGACCTCGGGGGTAAAAAAGTTCCAGCTGCTGTACAAGGT
GCGACTGCACATTCGTCCCGACAAGGATGACCTGGCGGGAATCAAGCTCA
CCTATCTCCAGGCGGTGCAAGACTTGCGCGACGGCATCTACATGGTGAGC
ACGGAGGACAGCATCCAGCTGGCGGCATTTCAGTTACAAGCGAGTAGAGG
CGACTACGACAAGAAAAACTGCACCGTCGGGTCCCTCGAGAAGGAGCTCA
GCACTCTCGCTCCGCCCCAGATCCTAGCCCAGCCGAAGGGCGACGACTTC
AAGGGGACAAAGGACTTCGCCAACAAGATTCTGGCTTACTACATGATGAG
CTTGAAAGGGGTCAGCAAGAAGGAAGCAAGAGCGCTGTTCATGGGTCTCA
TGTACGAGGTGCCCAGCTTTGGGCGGGCGTACTTCGACGGGGAGATGCCG
GGAAAGTCGGTCGTGGTCGGCATCGGCGCCGCCGGGGTGCGGCTCCTCGA
CGCGAGCGACGGGGATCGTCCCATCTTGGCGGAGTACTCATTCGACATTA
TTGCGTCCTTTGTTTGCTCTGACGGGGTTACGGCGGTTATGACGCTGACG
GCCCGGGAAGGGGAATTGAAGCCGACGTTGGTGACTATCCAGTCCGCGCA
GGCGCCGCAGATGAAGAGCCTGGTGCACGCTTACATGGTGCGGTACGTGT
TGCCGAGACAAAATAAGGAAGAGGCCGAAAACAAGAGAAAAAAGGCGGAG
GCGGAGAATTCTGTGGTCCCGTTTTCGGCTGGAGCATGA
back to top