mRNA_P-littoralis_Contig1418.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 376 bits (965), Expect = 1.380e-127 Identity = 186/277 (67.15%), Postives = 215/277 (77.62%), Query Frame = 1
Query: 1 ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKL 831
+LA T+ AAKVFRERFRVP+ FF LV+LSR K+WFS G DAA REGIP+ELK+L G+GNCFDD+ QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM + +LG TGA GSTDVTH+G MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V IR Y +REYKLRK +GTE TR+GC+LIVDNGY+E +D AFS+ LESVRKDVECFFGILKGRFRILKL
Sbjct: 84 DLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKL 342
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 375 bits (963), Expect = 1.110e-125 Identity = 172/274 (62.77%), Postives = 216/274 (78.83%), Query Frame = 1
Query: 13 PTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLS 834
PTS A+ FRE FR+P+ FF+ LV L +++ WF G DA+GR GIPV+LK+L LQIL RGNCF DI +S +S AAATFH+F + FA+EM+ EHI+LPTG YQ +VM Y +LGF+GA GSTDVTH+ WGMCP+ RS+TGKEG+PT+A++VTVDH R + VT GFTG+TNDK+I+RYD AV IR + +Y ++E+ + +ADGT + KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LESVRKDVECFFGI+KGRFRILKLS
Sbjct: 108 PTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLS 381
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 351 bits (901), Expect = 4.190e-116 Identity = 163/273 (59.71%), Postives = 206/273 (75.46%), Query Frame = 1
Query: 16 TSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLS 834
T+ A+ FR FRVP+ FF+ LVEL R++ WF G +D GR+ +PVELK+L LQIL RGN F DI +S +S A+TFH+FCK FA E+++E++YLPTG +VM+ Y ++GF GA+GSTDVTH+ WGMCP+ R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV IR + VY +++YKL DG +F KGCYL+VDNGYH+W TL+ PSK P D D FSK LES RKDVEC+FGILKGRFRI KL+
Sbjct: 125 TTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLA 397
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 337 bits (864), Expect = 4.480e-111 Identity = 168/280 (60.00%), Postives = 201/280 (71.79%), Query Frame = 1
Query: 1 ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLS 834
+L PTS AAK FRE FRVP+ FFLRLVEL ++K WF+ DA GR PVE K+L L ILGRGN F I LS MS FH+FC++FA EM++EHI+LP+ D VM Y KLGF GA+GSTDVTH+GW CP+ GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKTI+ D AV IR +K Y ++ + + K DGT T KGCYLIVDNGYH+W L+ PSKYP D FSK LESVRKDVECFFGILK RFRILKL+
Sbjct: 73 DLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLA 352
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 330 bits (846), Expect = 3.050e-109 Identity = 161/280 (57.50%), Postives = 200/280 (71.43%), Query Frame = 1
Query: 1 ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLS 834
+L S ++K FR FRVP +FFLRLV L + K WF+ G DAA R+ PVE K+L L ILGRGNCF I Q+S MS FHKFCK+FA+EM++EHIYLP+ D VM Y +LGF+GA+GS DVTH+GW CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+ IR + Y ++ + + DGT T KGCYL+VDNGYH+W LM P+KYP +D FSK LESVRKDVECFFGILKG FRI K++
Sbjct: 44 DLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVA 323
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 330 bits (845), Expect = 2.940e-108 Identity = 181/354 (51.13%), Postives = 205/354 (57.91%), Query Frame = 1
Query: 1 ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELK--------------------------------------------------------------------------------------------------------------ILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGD 732
+L T++AAKVFR RFRVPHAFFL LV+++R KKWFS DA GR GIP+ELK ILTALQILGRGNCFDDI QLSLMSK MAAATFHKFCK+FA+E+FEEHIYLPTG+YQDEVM Y KLG TGAIGSTDVTH+GWGMCPFTLGRS+TGKEGFPT+A++VTVDHAGRAI +T GFTGATNDKTI+RYDA V TI+ + Y R YKLR+ADGT RKGCY IVDNGYHE +L P++ D
Sbjct: 86 DLLDHTTEAAKVFRTRFRVPHAFFLELVKMARGKKWFSVREKDAVGRRGIPIELKLSSYRSGLLLLVVNCSDVPSIEPMRWIVVHNFTRWYRRVHSSTAVVAEHGSMGNVPCTVTRTSHRWHRKYCCRRPTAREKRRTLWFRLHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHEVNSLGHPNRMRED 439
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 325 bits (834), Expect = 9.840e-108 Identity = 154/217 (70.97%), Postives = 178/217 (82.03%), Query Frame = 1
Query: 181 QILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKL 831
Q+LG+GNCFDD+ QLS MSKSMA TFHKFC++FA EMF+EHIYLPTGTY DEVM + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT GFTGATNDKTI+RYD+ V IR Y +REYKLRKA+GT+ R+GC+LIVDNGYHEWVTL+APSKYP +D AFS+ LESVRKDV CF RILKL
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKL 250
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 318 bits (816), Expect = 4.750e-104 Identity = 165/308 (53.57%), Postives = 198/308 (64.29%), Query Frame = 1
Query: 1 ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLS 834
+L TS AK R FRVP+ FLRLV L + K WFS DA G PVE K+L L ILGRGNCF I Q+S MS FHKFC++FA+EM++E I+LPT D VM Y +LGFTGA+GS DVTH+ W CP+ RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TNDKTIV +D AV+ I +K Y ++ + + DGT T KGCYL+VDNGYH+W L+ PSKYP +D FSK LESVRKDVECFFGILKGRFRILKL+
Sbjct: 31 DLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLA 338
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 296 bits (759), Expect = 7.230e-96 Identity = 138/228 (60.53%), Postives = 173/228 (75.88%), Query Frame = 1
Query: 151 PVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLS 834
P ++L LQIL RGN F DI +S +S A+TFH+FCK FA E+++E++YLPTG +VM+ Y ++GF GA+GSTDVTH+ WGMCP+ R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV IR + VY +++YKL DG +F KGCYL+VDNGYH+W TL+ PSK P D D FSK LES RKDVEC+FGILKGRFRI KL+
Sbjct: 79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLA 306
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 291 bits (745), Expect = 4.890e-91 Identity = 144/215 (66.98%), Postives = 164/215 (76.28%), Query Frame = 1
Query: 262 HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKL 831
HKFC++FA EMF+EHIYL TGTY DEVM + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATNDKTI+RYD+ V IR Y +REYKLRKA+GTE TR+GC+LIVDNG +H+ WVTL+APSKYP +D AFS+ LESVRKDVECFFGILKGRFRILKL
Sbjct: 246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKL 460 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1418.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1418.3.1 >prot_P-littoralis_Contig1418.3.1 ID=prot_P-littoralis_Contig1418.3.1|Name=mRNA_P-littoralis_Contig1418.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=278bp ELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIback to top mRNA from alignment at P-littoralis_Contig1418:18019..20268+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1418.3.1 ID=mRNA_P-littoralis_Contig1418.3.1|Name=mRNA_P-littoralis_Contig1418.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2250bp|location=Sequence derived from alignment at P-littoralis_Contig1418:18019..20268+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1418:18019..20268+ >mRNA_P-littoralis_Contig1418.3.1 ID=mRNA_P-littoralis_Contig1418.3.1|Name=mRNA_P-littoralis_Contig1418.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=834bp|location=Sequence derived from alignment at P-littoralis_Contig1418:18019..20268+ (Pylaiella littoralis U1_48)back to top |