mRNA_P-littoralis_Contig1412.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1412.1.1
Unique NamemRNA_P-littoralis_Contig1412.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 624 bits (1610), Expect = 3.950e-220
Identity = 347/418 (83.01%), Postives = 373/418 (89.23%), Query Frame = 2
Query:  230 MAPFTASIAPLAALFMGSTTTAFVAPTGRGASWSLASPQEAVRSFTSTVAKRNNVARRRSATP-TASLRMVSEIAEVAEQKAAKLRETAAAFRAQAAELEEKQASERRENAKRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDDRIAALPGGSLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRARLENLFSQQREEERLVRVEERQRQMDDKMRPDAEAAVVASPGEVNDGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLALRSLPFANLIGFFGLSIGSSNPQINKLVRFNMQQAINLDIALILPGVLGALSAGLLGQDAFKLAPFANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQGDDE 1480
            MAP TA+I PL  LF+GSTT AFV PTGRGASWSLA+PQ AVRS TS VA R+N  RR SATP T+SLRMVSE+AE   Q+AAKLRETAAAFRA+AAELE+KQA ERRENA+RSFNTFDSNKDGSVD+AELKAGLE PLRRSFTKTLQARMGRKPSKEEVDDRIA LPGG+LFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELR RLENLFSQQREEER+ R+E       D+MRPDA   VV SPG+VNDGPATTADKALSALPY+LPL+DG+V AAHLFGAFPEQTAWAQPLA VLLALRS+PFA LIGFF LSI SSNPQINKLVRFNMQQAINLDIALILPGV+GA++  +LG DA KLAP ANA SDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQ+G +E
Sbjct:    1 MAPITATIVPLVTLFVGSTT-AFVTPTGRGASWSLANPQHAVRSSTSAVATRHNARRRSSATPATSSLRMVSEVAE---QRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDA-GTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQEGGEE 413          
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 567 bits (1462), Expect = 7.030e-198
Identity = 323/393 (82.19%), Postives = 346/393 (88.04%), Query Frame = 2
Query:  230 MAPFTASIAPLAALFMGSTTTAFVAPTGRGASWSLASPQEAVRSFTSTVAKRNNVARRRSATP-TASLRMVSEIAEVAEQKAAKLRETAAAFRAQAAELEEKQASERRENAKRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDDRIAALPGGSLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRARLENLFSQQREEERLVRVEERQRQMDDKMRPDAEAAVVASPGEVNDGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLALRSLPFANLIGFFGLSIGSSNPQINKLVRFNMQQAINLDIALILPGVLGALSAGLLGQDAFKLAPFANAGSDVVFVALLAAVAYSVGTSATG 1405
            MAP +A+  PL AL +GSTT AFVAP GRGASWSLA+PQ AVRS TS  A R+N  RR SA P T+SLRMVS++AE   QKAAKLRETAAAFRA+        A ERRENA RSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVD+RIA LPGG+LFPD+LALKLIQTYDQNGDGLLQQSEFAPTEELR RLENL SQQRE+ERL R+EERQRQMDDKMRPD   AVV SPG+VNDGPATTADKALSALPYLLPL DGI+ AAHLFGAFPEQTAWAQPLA VLLALRSLPFA LIGFF LSIGSSNP++NKLVRFNMQQAINLDIALILPGV+GA++ G+LG DA KLAP +NAGSDVVFVALLAAVAYSVGTSATG
Sbjct:    1 MAPLSATTIPLLALSLGSTT-AFVAPIGRGASWSLANPQRAVRSSTSAAATRHNTLRRSSAMPATSSLRMVSKVAE---QKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDKMRPDT-GAVVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388          
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 525 bits (1353), Expect = 3.950e-181
Identity = 300/417 (71.94%), Postives = 335/417 (80.34%), Query Frame = 2
Query:  230 MAPFTASIAPLAALFMGSTTTAFVAPTGRGASWSLASPQEAVRSFTSTVAKRNNVARRRSATPTASLRMVSEIAEVAEQKAAKLRETAAAFRAQAAELEEKQASERRENAKRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDDRIAALPGGSLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRARLENLFSQQREEERLVRVEERQRQMDDKMRPDAE--AAVVASPGEVNDGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLALRSLPFANLIGFFGLSIGSSNPQINKLVRFNMQQAINLDIALILPGVLGALSAGLLGQDAFKLAPFANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQGD 1474
            MAPFT+SI PL AL +GSTT AFV PTGRGASWSL S Q+   S T T   R  + R        +    SE+ EVA++KAA+LRETAAAFRAQAAELE+K+  ER+  A+RSFN+FDSN+DG+VDI ELKAGLE PLRRSF K L ARMGRKP +EE+D RIAALPGGSLFPDDLA KLI TYDQNGDGLLQ+SEFAPTEELR RLEN+F  Q+E  R  RVEERQRQM+DK+  +    A  V   G VNDGPAT ADKALSALPYLLPL DGI  A HLFGAFPEQTAWAQPLA VLLALRSLPFA L+GFF LS  S NPQ+NKLVRFNMQQAINLDIALI+PGVLGAL++  LGQDA+KL P A AGSDVVFVA+LAAVAYSV TS+TGSFPNKLPLLGRLNRENPD ++ +
Sbjct:    1 MAPFTSSIIPLLALLLGSTT-AFVTPTGRGASWSLPSVQQ---SSTFTAVARQAIRRSSPCLSMMATGTSSEV-EVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGRKPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDREEEE 412          
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 514 bits (1325), Expect = 4.350e-177
Identity = 292/355 (82.25%), Postives = 313/355 (88.17%), Query Frame = 2
Query:  230 MAPFTASIAPLAALFMGSTTTAFVAPTGRGASWSLASPQEAVRSFTSTVAKRNNVARRRSATP-TASLRMVSEIAEVAEQKAAKLRETAAAFRAQAAELEEKQASERRENAKRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDDRIAALPGGSLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRARLENLFSQQREEERLVRVEERQRQMDDKMRPDAEAAVVASPGEVNDGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLALRSLPFANLIGFFGLSIGSSNPQINKLVRFNMQQAINLDIALILPGVLGALSAG 1291
            MAP TA+I PL  LF+GSTT AFV PTGRGASWSLA+PQ AVRS TS VA R+N  RR SATP T+SLRMVSE+AE   Q+AAKLRETAAAFRA+AAELE+KQA ERRENA+RSFNTFDSNKDGSVD+AELKAGLE PLRRSFTKTLQARMGRKPSKEEVDDRIA LPGG+LFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELR RLENLFSQQREEER+ R+E       D+MRPDA   VV SPG+VNDGPATTADKALSALPY+LPL+DG+V AAHLFGAF EQTAWAQPLA VLLALRS+PFA LIGFF LSIGSSNPQINKLVRFNMQQAINLDIALILPGV+G    G
Sbjct:    1 MAPITATIVPLVTLFVGSTT-AFVTPTGRGASWSLANPQHAVRSSTSAVATRHNARRRSSATPATSSLRMVSEVAE---QRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGRKPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDA-GTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVGCDHGG 350          
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 1.040e-130
Identity = 218/305 (71.48%), Postives = 235/305 (77.05%), Query Frame = 2
Query:  569 FNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDDRIAALPGGSLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRARLENLFSQQREEERLVRVEERQRQMDDKMRPDAEAAVVASPGEVNDGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLALRSLPFANLIGFFGLSIGS-SNPQINKLVRFNMQQAINLDIALILPGVLGALSAGLLGQDAFKLAPFANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQGDDE 1480
            FNTFDSNKDGSVDIAELKAGLESPLRR  TKTLQARMGRKPSKEEVD+RIA LPGG+LFPD+LALKLIQTYDQNGDGLLQ SEFAPTEELR RLE+LFSQQRE+ER+ R+EERQR+MDDKMRPD  A V                                             TAWAQPLA VLLALRS+PFA LIGFF LS+    NPQ+NKLVRFN QQAIN+DIALILPGV+GA++  +LG DA KLAP ANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENP+NQQ   E
Sbjct:   47 FNTFDSNKDGSVDIAELKAGLESPLRRGLTKTLQARMGRKPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMDDKMRPDTGAVV---------------------------------------------TAWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPENQQEGGE 306          
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 375 bits (963), Expect = 3.070e-124
Identity = 195/238 (81.93%), Postives = 214/238 (89.92%), Query Frame = 2
Query:  767 LIQTYDQNGDGLLQQSEFAPTEELRARLENLFSQQREEERLVRVEERQRQMDDKMRPDAEAAVVASPGEVNDGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLALRSLPFANLIGFFGLSIGSSNPQINKLVRFNMQQAINLDIALILPGVLGALSAGLLGQDAFKLAPFANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQGDDE 1480
            L+++YDQNGDGLLQQSEFAPTEELR RLENLFSQQREEER+ R+E        KMRPDA  AV  SPG+VNDGPATTADKALSALPY+LPL+DG+V AAHLFGAFPEQTAWAQPLA VLLALRS+PFA L+GFF LS+GSSNPQINKLVRFNMQQAINLDIALILPGV+GA++  +LG DA KLAP ANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQ+G ++
Sbjct:   40 LVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRPDA-GAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQEGGEQ 276          
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 1.000e-106
Identity = 204/412 (49.51%), Postives = 264/412 (64.08%), Query Frame = 2
Query:  230 MAPFTASIAPLAALFMGSTTTAFVAPTGRGAS-WSLASPQEAVRSFTSTVAKRNNVARRRSATPTASLRMVSEIAEVAEQKAAKLRETAAAFRAQAAELEEKQASERRENAKRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDDRIAALPGGSLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRARLENLFSQQREEERLVRVEERQRQMDDKMRPDAEAAVVASPGEVNDGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLALRSLPFANLIGFFGLSIGSSNPQINKLVRFNMQQAINLDIALILPGVLGALSAGLLGQDAFKLAPFANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDN 1462
            MAP TAS  PL ALF+GSTT AF+AP+GRG S W   + Q+      S  ++R   A  + AT  A                                            A RSF  FDSNKDG+V +AELKAGLE PL+++FTK L ARMGRKP+ EEV+ +I  LPG +LFPDDLA +LI+ YDQNGDG+LQQSEFAPTEELRARLE++F ++REEE   R  ER+R+MD K     +     +  +     AT+ +KAL ALPY+LPLSDGIV A H++  FP+Q AW++PL  +L+A+ +LPFA L+ FFG+SI SSN  INKL+RFNM QAIN DIALI+P V G L    LG DA+K++P  +  +D++ V+L+ AVAYS+  SATG+ PNK+P  G++NR   D+
Sbjct:    1 MAPVTASTFPLVALFLGSTT-AFLAPSGRGTSTWCGPNAQQQSARAGSITSRRPYSAVIQMATGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------GADRSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGRKPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTTGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINRVTRDD 403          
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 5.890e-106
Identity = 182/258 (70.54%), Postives = 197/258 (76.36%), Query Frame = 2
Query:  707 DDRIAALPGGSLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRARLENLFSQQREEERLVRVEERQRQMDDKMRPDAEAAVVASPGEVNDGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLALRSLPFANLIGFFGLSIGSSNPQINKLVRFNMQQAINLDIALILPGVLGALSAGLLGQDAFKLAPFANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQGDDE 1480
            D+RIA LPGG+LFPD+LALKLIQTYD NG+GLLQQSEFAPTEELR RLENLFSQQREE+RL R+EERQRQMDD MRPDA  AVV SPG+VNDG   TAD ALSALPYLLPL+DGIV AAHLFG FPEQTAWAQPLA                                       AIN+DIALILPGV+GA++  +LG DA KLAP ANAGSDVVFVALLAAVAYSVGTSATGSFP+KLPLLGRLNRENP N+Q  DE
Sbjct:   21 DERIAGLPGGTLFPDELALKLIQTYDHNGNGLLQQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRPDA-GAVVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAA--------------------------------------AINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNRENPGNEQEGDE 239          
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 1.070e-104
Identity = 165/195 (84.62%), Postives = 180/195 (92.31%), Query Frame = 2
Query:  896 VEERQRQMDDKMRPDAEAAVVASPGEVNDGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLALRSLPFANLIGFFGLSIGSSNPQINKLVRFNMQQAINLDIALILPGVLGALSAGLLGQDAFKLAPFANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQGDDE 1480
            +EERQRQMDDKMRPDA  AV  SPG+VNDGPATTADKALSALPY+LPL+DG+V AAHLFGAFPEQTAWA+PL  VLLALRS+PFA LIGFF LS+GSSNPQINKLVRFNMQQAINLDIALILPGV+GA++  +LG DA KLAP ANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQ+G ++
Sbjct:    1 MEERQRQMDDKMRPDA-GAVEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQEGGEQ 194          
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 1.860e-97
Identity = 171/348 (49.14%), Postives = 239/348 (68.68%), Query Frame = 2
Query:  449 AEVAEQKAAKLRETAAAFRAQAAELEEKQASERRENAKRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGRKPSKEEVDDRIAALPGGSLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRARLENLFSQQREEERLVRVEERQRQMD----DKMRPDAEAAVVASPGEVNDGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLALRSLPFANLIGFFGLSIGSSNPQINKLVRFNMQQAINLDIALILPGVLGALSAGLLGQDAFKLAPFANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQQGDDE 1480
            AE A +KAAKLR  AA  R QA ELE K+ SE+++ A+ +F++FD+N DG+VD+ EL AGLE  LR+ F K +   M RKPS  EVD+RI+ +PGGSL P +LA KLI++YD NGDG+LQ SEFA   ++R RL++LF+ + +E RL     R+R+++    DK R +A+A  +A P + NDGP T  DK LS LPY LPL D +V  AH+F  FP Q ++ +PL  +LL  RSLPF+ LI FFGL   ++ P++NKLVRFN++QA+ LDIA+  P +   +   +LG+D+ KLAP A   +DV+FV ++A V YS+ +SA G  P  LP+LG++NRE+   ++ D E
Sbjct:   81 AEEAAEKAAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPAEVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSVLGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRESTRAKEDDGE 428          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1412.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS19_ECTSI3.950e-22083.01EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
D7FRG5_ECTSI7.030e-19882.19EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A2I6U1M4_SACJA3.950e-18171.94Tic20-like protein n=15 Tax=Saccharina japonica Ta... [more]
D8LS20_ECTSI4.350e-17782.25EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JBJ0_9PHAE1.040e-13071.48EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KUU9_9PHAE3.070e-12481.93Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY95_9PHAE1.000e-10649.51EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5KCI4_9PHAE5.890e-10670.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVD7_9PHAE1.070e-10484.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTM8_ECTSI1.860e-9749.14TIC 20 related, plastid import n=2 Tax=Ectocarpus ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1412contigP-littoralis_Contig1412:12235..15043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LS22
PFAMsEF-hand_5,TIC20
Model size1708
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009526,GO:0009528,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009706,GO:0009941,GO:0016020,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042170,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
Exons3
Evalue6.37e-225
EggNOG OGs2BYWW@1|root,2QUSD@2759|Eukaryota
Descriptionprotein transport
Cds size1254
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789663.616752-UTR-P-littoralis_Contig1412:12234..124561680789663.616752-UTR-P-littoralis_Contig1412:12234..12456Pylaiella littoralis U1_48UTRP-littoralis_Contig1412 12235..12456 -
1680789663.6284711-UTR-P-littoralis_Contig1412:12658..126611680789663.6284711-UTR-P-littoralis_Contig1412:12658..12661Pylaiella littoralis U1_48UTRP-littoralis_Contig1412 12659..12661 -
1680789663.6589515-UTR-P-littoralis_Contig1412:14814..150431680789663.6589515-UTR-P-littoralis_Contig1412:14814..15043Pylaiella littoralis U1_48UTRP-littoralis_Contig1412 14815..15043 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789663.6374373-CDS-P-littoralis_Contig1412:12661..134411680789663.6374373-CDS-P-littoralis_Contig1412:12661..13441Pylaiella littoralis U1_48CDSP-littoralis_Contig1412 12662..13441 -
1680789663.6468408-CDS-P-littoralis_Contig1412:14340..148141680789663.6468408-CDS-P-littoralis_Contig1412:14340..14814Pylaiella littoralis U1_48CDSP-littoralis_Contig1412 14341..14814 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1412.1.1prot_P-littoralis_Contig1412.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1412 12662..14814 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1412.1.1

>prot_P-littoralis_Contig1412.1.1 ID=prot_P-littoralis_Contig1412.1.1|Name=mRNA_P-littoralis_Contig1412.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=418bp
MAPFTASIAPLAALFMGSTTTAFVAPTGRGASWSLASPQEAVRSFTSTVA
KRNNVARRRSATPTASLRMVSEIAEVAEQKAAKLRETAAAFRAQAAELEE
KQASERRENAKRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARM
GRKPSKEEVDDRIAALPGGSLFPDDLALKLIQTYDQNGDGLLQQSEFAPT
EELRARLENLFSQQREEERLVRVEERQRQMDDKMRPDAEAAVVASPGEVN
DGPATTADKALSALPYLLPLSDGIVLAAHLFGAFPEQTAWAQPLAVVLLA
LRSLPFANLIGFFGLSIGSSNPQINKLVRFNMQQAINLDIALILPGVLGA
LSAGLLGQDAFKLAPFANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPL
LGRLNRENPDNQQGDDE*
back to top

mRNA from alignment at P-littoralis_Contig1412:12235..15043-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1412.1.1 ID=mRNA_P-littoralis_Contig1412.1.1|Name=mRNA_P-littoralis_Contig1412.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2809bp|location=Sequence derived from alignment at P-littoralis_Contig1412:12235..15043- (Pylaiella littoralis U1_48)
CGACGAACCCGTGTTCCAAAGCTCACAAGCCCTGACGACCCTCTGAGCAA GAGACATATCTGGGCGTTCCATACACCGAGTGACCTCTACCCCTTGCCCC TCTCGACTCACAACTATCTGCCACCGCACCTCAGCGAGGAAGAGCTGATC AGATCCAATACCACAACACACGAAGCAGCACACCTTCTTCCCGCACTTCT TACCGCAACAACATACAACGACATCCAACATGGCACCGTTCACCGCAAGC ATCGCCCCACTGGCGGCCCTCTTCATGGGCTCCACCACCACGGCCTTCGT CGCTCCCACCGGCCGCGGCGCATCGTGGTCCCTCGCCAGCCCTCAGGAAG CCGTCAGGTCGTTCACGTCCACAGTCGCCAAGCGCAACAACGTCGCTCGT CGCCGGTCGGCAACACCAACGGCTTCTCTGCGGATGGTGAGCGAGATCGC CGAGGTTGCCGAGCAAAAGGCGGCCAAGCTCCGCGAGACCGCGGCTGCCT TCCGCGCTCAAGCGGCGGAGCTGGAGGAGAAGCAGGCAAGCGAGAGACGC GAGAACGCGAAGCGATCCTTCAACACCTTCGACTCCAACAAGGACGGGTC GGTGGACATCGCCGAGCTCAAGGCCGGCCTCGAGAGCCCATTGCGCCGAA GCTTCACCAAGACGCTGCAGGCTCGCATGGGGCGGAAGCCTTCGAAAGAA GAGGTGAGGCAAGAGCCAAGACGAAGATCGTGTAGATAGCAGTGTTGCCG CCTGCTTCACAGGGAGGGTTGTTAAGAAGTTGGGTGTTCTGTGTTTCCGA CCTGAGAAAATGACGATGTTGTACAGCAGTGGTCTGTCGTCTTATTTCGC TCTTTTTTGAAGTGTCGCGCGAATAAAGTAAAACTAGCGGTTGGTAAAGG CTGGACATCGACCCCATGAAAAGGAACTGTTGACAAGGTACACTTGCGTA CAGCAGCAGACCTCGAAGCACCAACCCTGTCGGAAAATGAAGTGTTCTCT TTGTCCTACTCGTGTTTTCACATGAAATTTCGTACTCGTATTTATTATTG TTGCGCAAGGGTATGACGCATTTCTGCAAGCATTGTTGCTAGCCTATCAG ACGGCGACTCCACCGGGTTCGAATAGGTAAACGCATCCTTGTTCATTGAT GTGGATAGTGGAAAAAATGTGCAACGTTTTTCAATCCAGAAGTTTCCCAT AGTGTACAGCATCTCATCCATCCTTCCCCTTTCCCCCGACCTGCTGTTCA ACATCTGTCCTCTACAAATGTCACCTTCAGTGCCCCAAATGAAATCTAGC ACAACTGCAGTCAGATCTATCCATTTGCTTCCCCCATGACTGCTGTCGTT GAACAATCATGGTCGACAGAAGATGTCCAGCGGGCGCCCCTCAACCCAAA CCCAGCACCACCTCCTGTTTCAGCATCCACCCCTTCCCTTCTTTTCCCTT CCCCCAAATTGTTCTTCAACAAACTAGTTTCAACGAATTCACGTCGAATG GTCCCAAGTCAAATCGACACACCAGGATACTCACCTGTGCCTTCCCCTCT CCCTCCTCACCCCACCTCTCCCTTGCATCATTTCGTCGAAACGACCCATC AGGTGGACGACCGTATCGCCGCACTTCCGGGAGGCTCGCTATTCCCCGAC GACCTCGCCCTCAAGCTCATCCAGACGTACGACCAAAACGGCGACGGCCT GCTGCAGCAGTCAGAGTTCGCCCCCACGGAGGAGCTCAGGGCGCGGCTCG AGAACCTGTTCAGCCAGCAGCGGGAGGAGGAGCGCCTGGTGCGTGTCGAG GAGCGGCAGCGGCAGATGGACGACAAGATGAGGCCGGACGCGGAGGCGGC GGTGGTGGCGTCGCCGGGAGAGGTCAACGACGGCCCGGCCACCACGGCCG ACAAAGCTCTGTCGGCGCTGCCGTACCTGCTGCCCCTATCCGACGGCATC GTGCTGGCAGCCCATCTGTTCGGCGCGTTCCCGGAGCAGACGGCCTGGGC GCAACCGCTGGCCGTCGTCCTGCTGGCCCTGCGGTCTCTGCCGTTCGCGA ACCTGATCGGCTTCTTCGGCCTGTCTATCGGCTCGAGCAACCCACAGATC AACAAGCTCGTCAGGTTCAACATGCAGCAGGCCATCAACCTGGACATCGC TCTGATCCTGCCGGGCGTGCTGGGGGCGCTTTCGGCCGGGTTGCTGGGTC AAGACGCGTTCAAGCTGGCACCTTTTGCTAACGCAGGGTCGGATGTGGTG TTCGTGGCGTTGCTGGCGGCCGTGGCGTACTCCGTGGGGACTTCGGCGAC GGGTTCGTTCCCGAACAAGCTTCCGTTGCTGGGGCGTTTGAATCGCGAGA ACCCCGACAACCAGCAGGGGGATGACGAGTAGATGAATGCATGATGTGTA GCGTATTCAACTGTTGTAGTCTTGTGTGTATCGCCAAGTGTATCGGCGTC TTGTAGAATTCTGTACACATATTATACTGGAGTTTGATTCTTCGGTCGTG ATCAAAATTTTGCTTTGTAGAAATCATTTACATGAGATGTTGAGCCGTAG TGGTGGAATTTGTCATGGTTGAGTCACTTGTCCTGTTTGTGTCATTTACT CGTGTGCATGGATTCGAACGTTGTAGTATGTTCGTATTTTTCAATGGTGT GAAATGGGTATATGATGGTGATTTTTCGTGAACGACTGTTGCTAGCTTTG TACGTCTGCAAGGTGTTGTGAGTTTTGAAATCTGTGTGTACGTGATTATT TGTATCGTTTTGTATCGTTCATTCGCGGCAAAGTCCTATTCGTGCGACCT TTGTTCTCC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1412:12235..15043-

>mRNA_P-littoralis_Contig1412.1.1 ID=mRNA_P-littoralis_Contig1412.1.1|Name=mRNA_P-littoralis_Contig1412.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1254bp|location=Sequence derived from alignment at P-littoralis_Contig1412:12235..15043- (Pylaiella littoralis U1_48)
ATGGCACCGTTCACCGCAAGCATCGCCCCACTGGCGGCCCTCTTCATGGG
CTCCACCACCACGGCCTTCGTCGCTCCCACCGGCCGCGGCGCATCGTGGT
CCCTCGCCAGCCCTCAGGAAGCCGTCAGGTCGTTCACGTCCACAGTCGCC
AAGCGCAACAACGTCGCTCGTCGCCGGTCGGCAACACCAACGGCTTCTCT
GCGGATGGTGAGCGAGATCGCCGAGGTTGCCGAGCAAAAGGCGGCCAAGC
TCCGCGAGACCGCGGCTGCCTTCCGCGCTCAAGCGGCGGAGCTGGAGGAG
AAGCAGGCAAGCGAGAGACGCGAGAACGCGAAGCGATCCTTCAACACCTT
CGACTCCAACAAGGACGGGTCGGTGGACATCGCCGAGCTCAAGGCCGGCC
TCGAGAGCCCATTGCGCCGAAGCTTCACCAAGACGCTGCAGGCTCGCATG
GGGCGGAAGCCTTCGAAAGAAGAGGTGGACGACCGTATCGCCGCACTTCC
GGGAGGCTCGCTATTCCCCGACGACCTCGCCCTCAAGCTCATCCAGACGT
ACGACCAAAACGGCGACGGCCTGCTGCAGCAGTCAGAGTTCGCCCCCACG
GAGGAGCTCAGGGCGCGGCTCGAGAACCTGTTCAGCCAGCAGCGGGAGGA
GGAGCGCCTGGTGCGTGTCGAGGAGCGGCAGCGGCAGATGGACGACAAGA
TGAGGCCGGACGCGGAGGCGGCGGTGGTGGCGTCGCCGGGAGAGGTCAAC
GACGGCCCGGCCACCACGGCCGACAAAGCTCTGTCGGCGCTGCCGTACCT
GCTGCCCCTATCCGACGGCATCGTGCTGGCAGCCCATCTGTTCGGCGCGT
TCCCGGAGCAGACGGCCTGGGCGCAACCGCTGGCCGTCGTCCTGCTGGCC
CTGCGGTCTCTGCCGTTCGCGAACCTGATCGGCTTCTTCGGCCTGTCTAT
CGGCTCGAGCAACCCACAGATCAACAAGCTCGTCAGGTTCAACATGCAGC
AGGCCATCAACCTGGACATCGCTCTGATCCTGCCGGGCGTGCTGGGGGCG
CTTTCGGCCGGGTTGCTGGGTCAAGACGCGTTCAAGCTGGCACCTTTTGC
TAACGCAGGGTCGGATGTGGTGTTCGTGGCGTTGCTGGCGGCCGTGGCGT
ACTCCGTGGGGACTTCGGCGACGGGTTCGTTCCCGAACAAGCTTCCGTTG
CTGGGGCGTTTGAATCGCGAGAACCCCGACAACCAGCAGGGGGATGACGA
GTAG
back to top