mRNA_P-littoralis_Contig1406.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1406.4.1
Unique NamemRNA_P-littoralis_Contig1406.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Match: A0A2D8LND1_9FLAO (3-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LND1_9FLAO)

HSP 1 Score: 740 bits (1911), Expect = 4.490e-269
Identity = 379/395 (95.95%), Postives = 385/395 (97.47%), Query Frame = 1
Query:   13 MTNIKNVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGR*WQSQKTHQGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFRMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREKNQSFF 1197
            MTNIKNVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQ+ALDKAK SLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELED+NMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWG+     K   GFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGF+MGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMRE+ +SFF
Sbjct:    1 MTNIKNVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQQALDKAKLSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDTNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGKVVAVAKDTPGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFKMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREERKSFF 395          
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Match: UPI00058AEC2C (3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI00058AEC2C)

HSP 1 Score: 618 bits (1593), Expect = 1.060e-220
Identity = 308/390 (78.97%), Postives = 346/390 (88.72%), Query Frame = 1
Query:   28 NVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGR*WQSQKTHQGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFRMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREKNQSFF 1197
            N+GIIG+GTMGSGIAQVAATAGC VKL+D  Q ALDKAK+SLEKI++RL+EKGRI + E+ RIQ NISYV++LK+L D+N+TIEAI+ENLE+KQKVF ELE YV +DCIIASNTSSLSIASIAASL KPERCVGIHFFNPAPLMKLVE+IPAIQTS   L+ S ETI +W +     K   GFIVNRVARPFYGE+LRIYEEGIADF TID AMK+VGGFRMGPFELMDFIGNDVNYTVTETVF AFYFDPRYKPAFTQKRFAEAGYLGRKSG+GYY YD  GK+ISRH+EL S SH  + S +IF R+LVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKG+DWCV++MD LY  YHEDRYRCSPLLR+M+++N++FF
Sbjct:    2 NIGIIGSGTMGSGIAQVAATAGCQVKLYDTNQAALDKAKTSLEKILSRLIEKGRIDASEKDRIQSNISYVNTLKDLSDANLTIEAIIENLEIKQKVFSELESYVAEDCIIASNTSSLSIASIAASLNKPERCVGIHFFNPAPLMKLVEIIPAIQTSKEVLQKSIETISDWNKVVAVAKDTPGFIVNRVARPFYGESLRIYEEGIADFATIDAAMKDVGGFRMGPFELMDFIGNDVNYTVTETVFTAFYFDPRYKPAFTQKRFAEAGYLGRKSGKGYYDYDENGKLISRHSELVSESHNSKLSEQIFNRVLVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGIDWCVNTMDELYSEYHEDRYRCSPLLRKMKKENKTFF 391          
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Match: A0A6G6GP62_9FLAO (3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GP62_9FLAO)

HSP 1 Score: 614 bits (1583), Expect = 3.530e-219
Identity = 311/392 (79.34%), Postives = 348/392 (88.78%), Query Frame = 1
Query:   22 IKNVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGR*WQSQKTHQGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFRMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREKNQSFF 1197
            IKN+G+IGAGTMGSGIAQVAATAGC VKLFDL Q ALD AK+SLEKIMNRLVEKGRI ++E+ RIQ NI+YV+SL EL DSNMTIEAIVENLE+K+KVFQELEGYVD+ CIIASNTSSLSIASIA+SLKKPERCVGIHFFNPAPLMKLVEVIPAIQTS  TLKISEETI++WG+     K   GFIVNRVARPFYGEALRIYEEGIA+F TID AMK VGGFRMGPFELMDFIGNDVNYTVTETVF+AFYFDPRYKPAFTQKRF+EAGYLGRKSG+GYY Y+ +G++++  A +   S+       IFERILVMLINEAADALFLNIA+A+ IDNAMTKGVNYPKGLL WADEKG+DWCV  +D LYD YHEDRYRCSPLLR+M+++N++FF
Sbjct:    3 IKNIGVIGAGTMGSGIAQVAATAGCEVKLFDLNQAALDTAKASLEKIMNRLVEKGRINTDEKTRIQANITYVNSLHELADSNMTIEAIVENLEIKKKVFQELEGYVDEQCIIASNTSSLSIASIASSLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSTETLKISEETIQSWGKTVAIAKDTPGFIVNRVARPFYGEALRIYEEGIANFATIDHAMKTVGGFRMGPFELMDFIGNDVNYTVTETVFSAFYFDPRYKPAFTQKRFSEAGYLGRKSGKGYYTYNEKGQVVANEANI---SNDATLLQNIFERILVMLINEAADALFLNIANAEAIDNAMTKGVNYPKGLLTWADEKGIDWCVQKIDELYDEYHEDRYRCSPLLRKMKKQNKTFF 391          
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Match: A0A1G7GC27_9FLAO (3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Ulvibacter litoralis TaxID=227084 RepID=A0A1G7GC27_9FLAO)

HSP 1 Score: 609 bits (1571), Expect = 3.540e-217
Identity = 313/393 (79.64%), Postives = 346/393 (88.04%), Query Frame = 1
Query:   22 IKNVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGR*WQSQKTHQGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFRMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKK-EFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREKNQSFF 1197
            IK VGIIGAGTMGSGIAQVAATAGC VKLFDL Q ALDKAK+SLEKIM RLVEKGR+T EE+ RIQ++ISYV+SLKEL DS++TIEAIVEN+ +K+KVFQELE +V + CIIASNTSSLSIASIA+SL+KPERCVGIHFFNPAPLMKLVEVIP+IQTS+ATLK S +TI+NW +     K   GFIVNRVARPFYGEALRIYEEGIADFETID AMK  GGFRMGPFELMDFIGNDVNYTVTETVF AFY DPRYKP+FTQKRF+EAGYLGRKSGRGYY YD  GKI  RH+EL S SH   E +T IFER+LVMLINEAADALF NIASA+DIDNAMTKGVNYPKGLLAWADEKG+ WCV+ +D LYD YHEDRYRCSP+LRRM  +N++FF
Sbjct:   10 IKAVGIIGAGTMGSGIAQVAATAGCVVKLFDLNQAALDKAKASLEKIMTRLVEKGRVTLEEKTRIQDSISYVNSLKELADSDLTIEAIVENITIKKKVFQELESHVSEACIIASNTSSLSIASIASSLQKPERCVGIHFFNPAPLMKLVEVIPSIQTSEATLKTSVKTIQNWKKVVAVAKDTPGFIVNRVARPFYGEALRIYEEGIADFETIDAAMKTQGGFRMGPFELMDFIGNDVNYTVTETVFEAFYNDPRYKPSFTQKRFSEAGYLGRKSGRGYYSYDENGKITQRHSELASESHDTAEVATSIFERVLVMLINEAADALFWNIASAEDIDNAMTKGVNYPKGLLAWADEKGIAWCVAQLDELYDEYHEDRYRCSPMLRRMNRENKTFF 402          
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Match: A0A1H1KWI8_9FLAO (3-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A1H1KWI8_9FLAO)

HSP 1 Score: 606 bits (1562), Expect = 5.550e-216
Identity = 303/390 (77.69%), Postives = 341/390 (87.44%), Query Frame = 1
Query:   28 NVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGR*WQSQKTHQGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFRMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREKNQSFF 1197
            NVGIIG+GTMGSGIAQVAATAGCNVKL+D  Q AL+KAK++LEKI++RL+EKGRI S E+ RIQ NISYV SLK L DSN+TIEAI+ENL++K+KVF ELE YV DDCIIASNTSSLSIASIAA+L KPERC+GIHFFNPAPLMKLVEVIPAIQTS A L+ S +TI  W +     K   GFIVNRVARPFYGEALR+YEEGIADFETID ++K +GGFRMGPFELMDFIGNDVNYTVTETVF AFYFDPRYKPAFTQKRFAEAGY GRKSG+GYY YD  GKI+ RH++L S S K +    IF+R+LVMLINEAADALFLNIASA+DIDNAMTKGVNYPKGLLAWADEKG+DWCVS +D LYD+YHEDRYRCSPLLR+M ++N +FF
Sbjct:    2 NVGIIGSGTMGSGIAQVAATAGCNVKLYDTNQAALNKAKAALEKILSRLIEKGRIDSAEKDRIQSNISYVDSLKALADSNLTIEAILENLDIKKKVFSELESYVADDCIIASNTSSLSIASIAAALNKPERCIGIHFFNPAPLMKLVEVIPAIQTSKAVLETSVQTITEWKKVVAVAKDTPGFIVNRVARPFYGEALRLYEEGIADFETIDWSLKTIGGFRMGPFELMDFIGNDVNYTVTETVFTAFYFDPRYKPAFTQKRFAEAGYYGRKSGKGYYDYDQNGKIVPRHSKLVSESQKNKLGQHIFDRVLVMLINEAADALFLNIASAEDIDNAMTKGVNYPKGLLAWADEKGIDWCVSKLDELYDNYHEDRYRCSPLLRKMNKENNTFF 391          
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Match: A0A2E2W7D8_9FLAO (3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E2W7D8_9FLAO)

HSP 1 Score: 605 bits (1561), Expect = 8.470e-216
Identity = 313/398 (78.64%), Postives = 347/398 (87.19%), Query Frame = 1
Query:    1 ITYYMTNIKNVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGR*WQSQKTHQGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFRMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREKNQSF 1194
            +T   + I  +GIIGAGTMGSGIAQVA+TAGC VK+FDL Q+ALD AK+SLEKIM+RLVEKGRI SEE++RI+ NISYV+SLKEL DS+MTIEAIVENL++K+KVFQELEGYV D+CIIASNTSSLSIASIA++LKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDA LKISEETIK+WG+     K   GFIVNRVARPFYGEALRIYEEGIADF TID AMK VGGFRMGPFELMDFIGNDVNYTVTETVF AFY+DPRYKPAFTQKRFAEAG+LGRKSG+GYY Y A+  +  +  E D     ++   +IFERILVMLINEAADALF NIASAKDIDNAMTKGVNYPKGLLAWADEKG+DWCV  MDALY+ YHEDRYRCSPLLR+M +   SF
Sbjct:    1 MTNQQSTINKIGIIGAGTMGSGIAQVASTAGCTVKVFDLNQDALDTAKTSLEKIMSRLVEKGRINSEEKNRIEGNISYVNSLKELADSDMTIEAIVENLDIKKKVFQELEGYVSDNCIIASNTSSLSIASIASALKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDAVLKISEETIKSWGKVVAVAKDTPGFIVNRVARPFYGEALRIYEEGIADFATIDYAMKSVGGFRMGPFELMDFIGNDVNYTVTETVFEAFYYDPRYKPAFTQKRFAEAGWLGRKSGKGYYHYGAE--VSKQEPEKD-----RDLLNKIFERILVMLINEAADALFWNIASAKDIDNAMTKGVNYPKGLLAWADEKGIDWCVGKMDALYNEYHEDRYRCSPLLRKMAKDVVSF 391          
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Match: A0A370Q617_9FLAO (3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Marinirhabdus gelatinilytica TaxID=1703343 RepID=A0A370Q617_9FLAO)

HSP 1 Score: 601 bits (1550), Expect = 7.730e-214
Identity = 313/396 (79.04%), Postives = 342/396 (86.36%), Query Frame = 1
Query:   22 IKNVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGR*WQSQKTHQGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFRMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTE-----IFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREKNQSF 1194
            I  VGIIGAGTMGSGIAQVA+TAGC VKLFDL Q ALDKAK+SLEKIM+RLVEKGRI +EE++RIQ+NI+YV+SLKEL DS+MTIEAIVENL++K+KVFQELEGYV ++CIIASNTSSLSIASIA+SL+KPERCVGIHFFNPAPLMKLVEVIPAIQTS+ TLKISEETI NWG+     K   GFIVNRVARPFYGEALRIYEEGIA F  ID AMK VGGFRMGPFELMDFIGNDVNY VTETVF AFY+DPRYKPAFTQKRFAEAGYLGRKSGRGYY Y+  GK+  R  E    +  +  ++E     IF RILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKG+DWCV  MD LY+ YHEDRYRCSPLLRRM+ K   F
Sbjct:   15 ICRVGIIGAGTMGSGIAQVASTAGCTVKLFDLNQAALDKAKASLEKIMSRLVEKGRIDAEEKNRIQDNITYVNSLKELSDSDMTIEAIVENLDIKKKVFQELEGYVSEECIIASNTSSLSIASIASSLEKPERCVGIHFFNPAPLMKLVEVIPAIQTSEETLKISEETIGNWGKVVAIAKDTPGFIVNRVARPFYGEALRIYEEGIASFFEIDHAMKSVGGFRMGPFELMDFIGNDVNYIVTETVFKAFYYDPRYKPAFTQKRFAEAGYLGRKSGRGYYNYE-DGKMQQRQPERSRLASDERGTSERNAQYIFNRILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGIDWCVEQMDKLYEMYHEDRYRCSPLLRRMKNKGMRF 409          
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Match: UPI0014317D97 (3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein n=1 Tax=Gaetbulibacter sp. S0825 TaxID=2720084 RepID=UPI0014317D97)

HSP 1 Score: 598 bits (1541), Expect = 8.100e-213
Identity = 302/390 (77.44%), Postives = 341/390 (87.44%), Query Frame = 1
Query:   28 NVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGR*WQSQKTHQGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFRMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREKNQSFF 1197
            NVGIIG+GTMGSGIAQVAAT+GC VKL+D    AL KA+++L+KI+NRL+EKGRI   E++RIQ NI YV SLK L D+N+TIEAIVENLE+K+KVF ELEGYV DDCIIASNTSSLSIASIAASLKKPERC+GIHFFNPAPLM+LVEVIPAIQTS ATL  S + IK+W +     K   GFIVNRVARPFYGEALRIYEEGIADF TIDR++KE+GGFRMGPFELMDFIGND+NYTVTETVF+AFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYY YD  GKI++  A     SH +E S +IF R+LVMLINEAADALFLNIASA+DIDNAMTKGVNYPKGLLAWADEKG+DWCV+ MD LY+ YHEDRYRCSPLLR+M ++N++FF
Sbjct:    2 NVGIIGSGTMGSGIAQVAATSGCKVKLYDTNNTALYKAQTTLDKILNRLIEKGRIDETEKNRIQGNIEYVDSLKSLSDTNLTIEAIVENLEIKKKVFLELEGYVSDDCIIASNTSSLSIASIAASLKKPERCIGIHFFNPAPLMQLVEVIPAIQTSKATLDKSVQIIKDWKKTVAVAKDTPGFIVNRVARPFYGEALRIYEEGIADFATIDRSLKELGGFRMGPFELMDFIGNDINYTVTETVFSAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYDYDDNGKIVTSSAV--ERSHNEELSQKIFNRVLVMLINEAADALFLNIASAEDIDNAMTKGVNYPKGLLAWADEKGIDWCVTKMDELYNEYHEDRYRCSPLLRKMNKENKTFF 389          
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Match: A0A2G2HC66_9FLAO (3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Lutibacter sp. TaxID=1925666 RepID=A0A2G2HC66_9FLAO)

HSP 1 Score: 598 bits (1541), Expect = 8.710e-213
Identity = 294/390 (75.38%), Postives = 340/390 (87.18%), Query Frame = 1
Query:   28 NVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGR*WQSQKTHQGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFRMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREKNQSFF 1197
            N+GIIG+GTMGSGIAQVAAT+GC VKL+D  Q ALDK+K +LEK+++RL+EKGRI S+E+ RIQ NISYV++LK+L DSN+T+EAI+ENL++K+KVF ELE YV DDCIIASNTSSLSIASIAASL+KPERC+GIHFFNPAPLMKLVEVIPAIQTS   L  S + I +W +     K   GFIVNRVARPFYGE+LRIYEEG+ADF TID ++K +GGFRMGPFELMDFIGNDVNYTVTETVF AFYFDPRYKPAFTQKRF+EAGYLGRKSG+GYY YD  GK+I+RH+EL S SH  E S +IF+R+L MLINEAADALFLNIASA+DIDNAMTKGVNYPKGLLAWADEKG+DWCVS +D LY+ YHEDRYRCSPLLR+M  +N  F+
Sbjct:    2 NIGIIGSGTMGSGIAQVAATSGCKVKLYDTNQAALDKSKVALEKVLSRLIEKGRIDSDEKVRIQSNISYVNNLKDLADSNLTVEAIIENLDIKKKVFAELESYVSDDCIIASNTSSLSIASIAASLQKPERCIGIHFFNPAPLMKLVEVIPAIQTSKEVLDKSTQIISDWKKVVAVAKDTPGFIVNRVARPFYGESLRIYEEGLADFATIDWSLKTLGGFRMGPFELMDFIGNDVNYTVTETVFTAFYFDPRYKPAFTQKRFSEAGYLGRKSGKGYYNYDENGKLIARHSELVSGSHNSELSNQIFDRVLAMLINEAADALFLNIASAEDIDNAMTKGVNYPKGLLAWADEKGVDWCVSKLDELYNEYHEDRYRCSPLLRKMNRENLKFY 391          
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Match: UPI0015B8116A (3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein n=3 Tax=Winogradskyella TaxID=286104 RepID=UPI0015B8116A)

HSP 1 Score: 598 bits (1541), Expect = 9.730e-213
Identity = 300/389 (77.12%), Postives = 339/389 (87.15%), Query Frame = 1
Query:   31 VGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKIMNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQKVFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMKLVEVIPAIQTSDATLKISEETIKNWGR*WQSQKTHQGFIVNRVARPFYGEALRIYEEGIADFETIDRAMKEVGGFRMGPFELMDFIGNDVNYTVTETVFAAFYFDPRYKPAFTQKRFAEAGYLGRKSGRGYYKYDAQGKIISRHAELDSASHKKEFSTEIFERILVMLINEAADALFLNIASAKDIDNAMTKGVNYPKGLLAWADEKGMDWCVSSMDALYDHYHEDRYRCSPLLRRMREKNQSFF 1197
            VGIIG+GTMGSGIAQVAAT+G  VKL+D  Q+ALDKAK+SLEKI+NRL+EK RI S E++RIQ NISYV++LK+L DSN+TIEAI+ENL++K+KVF ELEGYV +DCIIASNTSSLSIASIAASLKKPERC+GIHFFNPAPLMKLVEVIPAIQTS+  L  S E IK+W +     K   GFIVNRVARPFYGEALRIYEEG+ADF TID AMK++GGFRMGPFELMDFIGND+NYTVTETVF AFYFDPRYKPAFTQKRFAEAGYLGRKSG+GYY YD  GKI+ RH +L S + K +   +IF RILVMLINEAADALF NIASA+DIDNAMTKGVNYPKGLLAWADE G+DWCVS MD LY+ YHEDRYRCSPLLR+M  + ++FF
Sbjct:    5 VGIIGSGTMGSGIAQVAATSGRKVKLYDTNQDALDKAKASLEKILNRLIEKERIDSSEKNRIQSNISYVNNLKDLSDSNLTIEAIIENLDIKKKVFSELEGYVSEDCIIASNTSSLSIASIAASLKKPERCIGIHFFNPAPLMKLVEVIPAIQTSNEVLDKSVEIIKDWKKTVAIAKDTPGFIVNRVARPFYGEALRIYEEGMADFATIDSAMKDIGGFRMGPFELMDFIGNDINYTVTETVFTAFYFDPRYKPAFTQKRFAEAGYLGRKSGKGYYDYDKNGKIVPRHPKLISETQKSKIGQQIFNRILVMLINEAADALFFNIASAEDIDNAMTKGVNYPKGLLAWADEMGIDWCVSKMDELYNEYHEDRYRCSPLLRKMNREVKTFF 393          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1406.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8LND1_9FLAO4.490e-26995.953-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Flavoba... [more]
UPI00058AEC2C1.060e-22078.973-hydroxyacyl-CoA dehydrogenase NAD-binding domain... [more]
A0A6G6GP62_9FLAO3.530e-21979.343-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Flavoba... [more]
A0A1G7GC27_9FLAO3.540e-21779.643-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Ulvibac... [more]
A0A1H1KWI8_9FLAO5.550e-21677.693-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Flavoba... [more]
A0A2E2W7D8_9FLAO8.470e-21678.643-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Flavoba... [more]
A0A370Q617_9FLAO7.730e-21479.043-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Marinir... [more]
UPI0014317D978.100e-21377.443-hydroxyacyl-CoA dehydrogenase NAD-binding domain... [more]
A0A2G2HC66_9FLAO8.710e-21375.383-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Lutibac... [more]
UPI0015B8116A9.730e-21377.123-hydroxyacyl-CoA dehydrogenase NAD-binding domain... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1406contigP-littoralis_Contig1406:12813..14009 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog216432.CA2559_05300
Preferred namepaaH
PFAMs3HCDH,3HCDH_N
Model size1197
Max annot lvl976|Bacteroidetes
KEGG rclassRC00029,RC00117
KEGG koko:K00074
KEGG ReactionR01976,R05576,R06941
KEGG Pathwayko00360,ko00362,ko00650,ko01100,ko01120,map00360,map00362,map00650,map01100,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.31e-83
EggNOG OGsCOG1250@1|root,COG1250@2|Bacteria,4NF2W@976|Bacteroidetes,1HXCF@117743|Flavobacteriia
EC1.1.1.157
Descriptiondehydrogenase
Cds size534
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789659.2774296-UTR-P-littoralis_Contig1406:12812..128241680789659.2774296-UTR-P-littoralis_Contig1406:12812..12824Pylaiella littoralis U1_48UTRP-littoralis_Contig1406 12813..12824 +
1680789659.3004851-UTR-P-littoralis_Contig1406:13358..140091680789659.3004851-UTR-P-littoralis_Contig1406:13358..14009Pylaiella littoralis U1_48UTRP-littoralis_Contig1406 13359..14009 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789659.2890627-CDS-P-littoralis_Contig1406:12824..133581680789659.2890627-CDS-P-littoralis_Contig1406:12824..13358Pylaiella littoralis U1_48CDSP-littoralis_Contig1406 12825..13358 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1406.4.1prot_P-littoralis_Contig1406.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1406 12825..13358 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1406.4.1

>prot_P-littoralis_Contig1406.4.1 ID=prot_P-littoralis_Contig1406.4.1|Name=mRNA_P-littoralis_Contig1406.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=178bp
MTNIKNVGIIGAGTMGSGIAQVAATAGCNVKLFDLKQEALDKAKSSLEKI
MNRLVEKGRITSEEQHRIQENISYVSSLKELEDSNMTIEAIVENLEVKQK
VFQELEGYVDDDCIIASNTSSLSIASIAASLKKPERCVGIHFFNPAPLMK
LVEVIPAIQTSDATLKISEETIKNWGR*
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mRNA from alignment at P-littoralis_Contig1406:12813..14009+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1406.4.1 ID=mRNA_P-littoralis_Contig1406.4.1|Name=mRNA_P-littoralis_Contig1406.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1197bp|location=Sequence derived from alignment at P-littoralis_Contig1406:12813..14009+ (Pylaiella littoralis U1_48)
ATAACGTATTATATGACAAATATTAAAAACGTAGGAATAATAGGAGCTGG AACTATGGGGTCGGGTATTGCACAAGTAGCTGCAACTGCTGGCTGCAACG TGAAATTATTCGATTTAAAACAAGAGGCACTTGATAAAGCTAAATCGAGT CTCGAAAAAATTATGAATCGCTTGGTGGAGAAAGGGCGAATCACTTCCGA AGAACAACATCGAATCCAAGAAAACATCAGCTACGTTAGTTCTTTGAAGG AATTGGAAGATAGCAATATGACCATCGAAGCTATTGTTGAGAATTTAGAA GTAAAACAAAAGGTATTTCAAGAATTAGAGGGATATGTTGATGATGACTG TATAATTGCTTCAAATACTTCTTCGCTTTCTATTGCTTCTATTGCAGCTT CTTTAAAAAAGCCAGAACGCTGTGTTGGGATTCATTTTTTCAATCCAGCA CCCCTTATGAAATTGGTGGAGGTAATTCCGGCAATCCAAACAAGTGATGC AACGCTTAAAATTTCCGAAGAAACCATTAAAAACTGGGGAAGGTAGTGGC AGTCGCAAAAGACACACCAAGGATTCATTGTGAACCGCGTCGCACGACCA TTTTACGGGGAGGCGTTGCGGATTTACGAAGAGGGAATAGCCGATTTTGA AACTATAGATAGGGCTATGAAAGAAGTGGGCGGATTCAGAATGGGGCCTT TCGAACTAATGGATTTTATAGGTAATGATGTGAATTATACGGTCACAGAA ACCGTGTTCGCAGCCTTTTATTTCGATCCGCGGTACAAACCAGCCTTCAC CCAAAAACGTTTTGCTGAAGCTGGATACCTGGGAAGAAAATCAGGAAGAG GATATTACAAGTACGATGCTCAAGGTAAAATCATTTCCCGTCATGCTGAA CTTGATTCAGCATCCCACAAGAAGGAGTTTTCAACAGAAATTTTTGAACG TATTTTAGTCATGCTTATTAACGAGGCCGCAGATGCACTGTTTTTGAATA TCGCATCTGCCAAAGACATTGATAATGCCATGACCAAAGGCGTGAATTAT CCAAAAGGGTTGCTCGCTTGGGCCGATGAAAAAGGAATGGATTGGTGCGT GTCTAGTATGGATGCGCTATACGATCATTATCATGAAGATCGGTATCGTT GTTCGCCGTTACTGCGAAGAATGCGTGAGAAAAACCAAAGCTTTTTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1406:12813..14009+

>mRNA_P-littoralis_Contig1406.4.1 ID=mRNA_P-littoralis_Contig1406.4.1|Name=mRNA_P-littoralis_Contig1406.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=534bp|location=Sequence derived from alignment at P-littoralis_Contig1406:12813..14009+ (Pylaiella littoralis U1_48)
ATGACAAATATTAAAAACGTAGGAATAATAGGAGCTGGAACTATGGGGTC
GGGTATTGCACAAGTAGCTGCAACTGCTGGCTGCAACGTGAAATTATTCG
ATTTAAAACAAGAGGCACTTGATAAAGCTAAATCGAGTCTCGAAAAAATT
ATGAATCGCTTGGTGGAGAAAGGGCGAATCACTTCCGAAGAACAACATCG
AATCCAAGAAAACATCAGCTACGTTAGTTCTTTGAAGGAATTGGAAGATA
GCAATATGACCATCGAAGCTATTGTTGAGAATTTAGAAGTAAAACAAAAG
GTATTTCAAGAATTAGAGGGATATGTTGATGATGACTGTATAATTGCTTC
AAATACTTCTTCGCTTTCTATTGCTTCTATTGCAGCTTCTTTAAAAAAGC
CAGAACGCTGTGTTGGGATTCATTTTTTCAATCCAGCACCCCTTATGAAA
TTGGTGGAGGTAATTCCGGCAATCCAAACAAGTGATGCAACGCTTAAAAT
TTCCGAAGAAACCATTAAAAACTGGGGAAGGTAG
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