mRNA_P-littoralis_Contig140.44.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Match: D7G6P6_ECTSI (tRNA (adenine(58)-N(1))-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P6_ECTSI) HSP 1 Score: 543 bits (1399), Expect = 9.290e-183 Identity = 310/507 (61.14%), Postives = 333/507 (65.68%), Query Frame = 1
Query: 94 MDFRAGRSPDGFRDPSTLNEMSSSPLIRVGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIVGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDIVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEIRATRAQEEFEENALGGLAKVAHRDVCAARVDGGGFGEELDGKADAVFLDLPEPWLAVEHAKLALKPGKKVCSYSPCIEQVMKTCEALRFSGFHSVTTIEFRLRNINYTEVQLDVPDFGCNPAASPSAPXXXXXXXXXEAQPASAVQASDGSLDEACAGADGEAAGAARRGRSVDAAAAGVGDGGVAEVPVTREASSRGAPAEEDGSKAGEKGGPVEDGRASSVPAAAEGAADSSIVATSGEGPSSKGNGAAIDPAAAAAAPDSNDTKKRPRDAEEGEGASDAGRGRNERLPSKAAIRASQSAVSGTGVAQKPLVKLVCAQPFPLMRGHTAFLTFATAPVARQFGAAAKAVA 1614
MDFRAGR DG RDP+T+ E S++PLIR GDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEI+GKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGD VVESGTGSGVMSTAIMRTIAPSGFLHSFEFNE RATRAQEEFEENALGGL K HRDVCAAR DGGGFGEELDGKADAVFLDLPEPWLAV HAK+ LKPGKK+CSYSPCIEQVMKTCEALR GFHSV+TIEFRLRNINY EV+ G P +G A +P +++ S E+GG G+GAA P +D GAS GRGRNERL KAAIRA+++A G A+KP +KLVCAQPFPLMRGHTAFLTFATAPV+RQ G AA A A
Sbjct: 1 MDFRAGRCSDGSRDPATICEASTAPLIRNGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIIGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDTVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEFRATRAQEEFEENALGGLVKAVHRDVCAARGDGGGFGEELDGKADAVFLDLPEPWLAVAHAKMTLKPGKKLCSYSPCIEQVMKTCEALRSEGFHSVSTIEFRLRNINYAEVE------GIKPM-----------------------------------------------------------EGDQAALPGSKKRSR-------------EEGG---------------------------------GSGAAT--------PGVDD------------GASRTGRGRNERLQPKAAIRAAEAAAEKVGGARKPPLKLVCAQPFPLMRGHTAFLTFATAPVSRQLGTAATAEA 376
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Match: A0A835ZH22_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH22_9STRA) HSP 1 Score: 302 bits (774), Expect = 4.230e-91 Identity = 144/214 (67.29%), Postives = 170/214 (79.44%), Query Frame = 1
Query: 286 IVGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDIVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEIRATRAQEEFEENALGGLAKVAHRDVCAARVDGGGFGEELDGKADAVFLDLPEPWLAVEHAKLALKPGKKVCSYSPCIEQVMKTCEALRFSGFHSVTTIEFRLRNINYTEVQLDVPDFGCNPA 927
++G+P+GS+VFSR+TKG++Y LSPTPELWS VVPNRTQIVQ DQS VIFRLD+KPGD V+ESGTGSG MSTAIMR IAP+G LH+FEFNE RA RA+ EF +N L L V HRDVC R GGFG++L+GKADA+FLDLPEPWLAV HA ALKP KKVCSYSPC+EQV +TC LR GFHS+ T+E R+R E LD+PD+G + A
Sbjct: 1 MIGQPYGSKVFSRSTKGFIYVLSPTPELWSTVVPNRTQIVQPSDQSFVIFRLDMKPGDTVIESGTGSGAMSTAIMRAIAPTGHLHTFEFNEARADRARAEFVKNGLASLVTVKHRDVCG-REGEGGFGDQLNGKADAIFLDLPEPWLAVPHAHAALKPNKKVCSYSPCVEQVQRTCTVLREWGFHSLATVELRIRPYQLYEADLDLPDWGSSTA 213
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Match: A0A1V9Z9G2_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9G2_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.220e-79 Identity = 131/269 (48.70%), Postives = 172/269 (63.94%), Query Frame = 1
Query: 115 SPDGFRDPSTLNEMSSSPLIRVGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIVGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDIVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEIRATRAQEEFEENALGGLAKVAHRDVCAARVDGGGFGEELDGKADAVFLDLPEPWLAVEHAKLALKPGKKVCSYSPCIEQVMKTCEALRFSGFHSVTTIEFRLRNINYTEVQLDVPDFGCN 921
+P PS+++ + P++ VGD+V+ +E + + M+ ++Q RHGAFHH++++G +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S ++F PG IVVESGTGSG ++T+ R I PSG +++FEFN RA A+EEF N L +A V RD C GF E LDGK D VFLDLP PW AV HAK LK G SYSPC+EQV KTC+ALR GF + TIE RL V + VPDFG N
Sbjct: 12 APTSVVAPSSVSMWAGKPIVEVGDLVILYETHNSVTYAFMEKDAVYQNRHGAFHHNDMIGHRYGTKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAILFNTHCGPGKIVVESGTGSGALTTSFARAIQPSGHVYTFEFNATRAQVAKEEFAANGLNKVATVECRDACEQ-----GFPEHLDGKVDVVFLDLPCPWKAVGHAKRVLKTGGAFASYSPCMEQVQKTCDALRIDGFDRIRTIETRLMTYTARYVSMPVPDFGAN 275
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Match: A0A7S3XKL8_HETAK (tRNA (adenine(58)-N(1))-methyltransferase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKL8_HETAK) HSP 1 Score: 261 bits (668), Expect = 2.220e-76 Identity = 125/210 (59.52%), Postives = 161/210 (76.67%), Query Frame = 1
Query: 286 IVGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDIVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEIRATRAQEEFEENALGGLAKVAHRDVCAARVDGGGFGEELDGKADAVFLDLPEPWLAVEHAKLALKPGKKVCSYSPCIEQVMKTCEALRFSGFHSVTTIEFRLRNINYTEVQLDVPDFG 915
++GK +GS+V SR + G+V+ L PTPELW+ + +RTQIVQ D ++V+ RL LKPG +V+ESGTGSG MS AIMR IAP+G LH+FEFNE RA +A+EEF++N +G L V HRDVCA +GG FG+ L+GK DAVFLDLP PWLA+ A ALK G+ +CSYSPCIEQV+KTC+ LR GFHS+TT+E RLR+ + V+ + PDFG
Sbjct: 1 MIGKTYGSQVQSRISTGWVFLLKPTPELWTLALDHRTQIVQGSDAALVVLRLHLKPGMVVIESGTGSGAMSYAIMRAIAPTGHLHTFEFNEHRAKQAEEEFKKNRVGHLVTVRHRDVCAEGAEGG-FGDHLNGKVDAVFLDLPAPWLALPRAHAALKAGETLCSYSPCIEQVIKTCDKLRELGFHSITTVENRLRSYDVRPVEFETPDFG 209
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Match: B7FTZ8_PHATC (tRNA (adenine(58)-N(1))-methyltransferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTZ8_PHATC) HSP 1 Score: 251 bits (640), Expect = 8.880e-74 Identity = 127/236 (53.81%), Postives = 162/236 (68.64%), Query Frame = 1
Query: 172 IRVGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIVGKPFGSRVFSRTTKGY--VYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDIVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEIRATRAQEEFEENALGGLAKVAHRDVCAARVDGGGFGEELDGKA-DAVFLDLPEPWLAVEHAKLALKPGKKVCSYSPCIEQVMKTCEALRFSGFHSVTTIEFRLR 870
IR GD+VV E + + F K I+ R+G FHH++ +GKPFG ++ SR+ +GY VY L PTPELW+ + +RTQIV + DQS VIF+L LKP VVESGTGSG MS AI+RTIAP G LH++EFNE RA A+ EF N +G L V H+DVC R DGG +L ++ D VFLDLPEPWLAV HA +KP ++ SYSPC+EQ + E LR SGFHS+ T+E+RL+
Sbjct: 1 IRTGDLVVIMESFDNLAFVYAKEGEIFSNRNGNFHHNDFIGKPFGCKIRSRSHRGYGFVYLLKPTPELWARSLNHRTQIVHELDQSQVIFQLHLKPNMTVVESGTGSGAMSHAILRTIAPHGKLHTYEFNEHRADTARHEFANNGVGHLVSVHHKDVCGIRGDGG---FDLPPQSVDGVFLDLPEPWLAVPHAAFVMKPNARLASYSPCVEQTQRMVETLRQSGFHSIKTMEYRLQ 233
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Match: A0A7S2WUG9_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUG9_9STRA) HSP 1 Score: 253 bits (647), Expect = 1.550e-73 Identity = 126/249 (50.60%), Postives = 173/249 (69.48%), Query Frame = 1
Query: 172 IRVGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIVGKPFGSRVFSRT-TKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDIVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEIRATRAQEEFEENALGGLAKVAHRDVCAARVDGGGFGEELDGKADAVFLDLPEPWLAVEHAKLALKPGKKVCSYSPCIEQVMKTCEALRFSGFHSVTTIEFRLRNINYTEVQLDVPDFG 915
I G +V+ F + + ++ +I + G FHH++I+G+PFGS +S++ T+G++YAL TPELW+ +P+RTQIV + D ++V +L++KPG V+ESGTGSG MS+ + R+++P+G L +FEFNE RA A+EEF++N L L VAH DVC GG G E G ADAVFLDLPEPW+AV HA ALKP +++ YSPCIEQVMKT ALR +GFHS+ T+E RL++ N E VPDFG
Sbjct: 13 IAPGSLVIVFLHHDQLDHIVIQRDSILNNKWGTFHHNDIIGQPFGSIWYSKSSTRGWLYALQATPELWAMALPHRTQIVHELDAAMVTLKLNVKPGFRVIESGTGSGAMSSVLARSLSPTGHLFTFEFNENRADAAREEFKQNNLSHLVTVAHFDVCGKGGTGGFPGVE-SGTADAVFLDLPEPWVAVPHAATALKPNRRIACYSPCIEQVMKTATALRDAGFHSIETVEVRLKSYNVREFPFKVPDFG 260
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Match: A0A6G0XQT4_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQT4_9STRA) HSP 1 Score: 252 bits (643), Expect = 2.670e-73 Identity = 124/248 (50.00%), Postives = 160/248 (64.52%), Query Frame = 1
Query: 169 LIRVGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIVGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDIVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEIRATRAQEEFEENALGGLAKVAHRDVCAARVDGGGFGEELDGKADAVFLDLPEPWLAVEHAKLALKPGKKVCSYSPCIEQVMKTCEALRFSGFHSVTTIEFRLRNINYTEVQLDVPDF 912
++ GD+V+ FE I + MK I+Q RHGAFHH++++G +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S +IF+ PG IV+ESGTGSG ++TA RT+AP G +++FEFN RA A+EEF N L + + RD C GF + L+GK D VFLDLP PW AV HAK LK SYSPC+EQV KTC+ALR GF V TIE RL + V L +P F
Sbjct: 15 VVEEGDLVILFETHNSITYAYMKRDEIYQNRHGAFHHNDMIGHKYGTKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAIIFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKEEFHANGLDSVVTIECRDACEQ-----GFPDNLEGKVDVVFLDLPCPWKAVGHAKQMLKHNGAFASYSPCMEQVQKTCDALRLDGFDRVRTIETRLMPYSTRTVTLPLPSF 257
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Match: A0A1V9ZMU4_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZMU4_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.100e-72 Identity = 121/249 (48.59%), Postives = 164/249 (65.86%), Query Frame = 1
Query: 169 LIRVGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIVGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDIVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEIRATRAQEEFEENALGGLAKVAHRDVCAARVDGGGFGEELDGKADAVFLDLPEPWLAVEHAKLALKPGKKVCSYSPCIEQVMKTCEALRFSGFHSVTTIEFRLRNINYTEVQLDVPDFG 915
++ VGD+V+ FE + + M+ ++ RHGAFHH++++G+ FG++V+SR +KGY++ LSPT ELWS + +RTQIV D S ++F PG IV+ESGTGSG ++T+ R + P+G +++FEFN RA A+EEF+ N L +A + RD C GF E+LDGK D VFLDLP PW AV HAK ALK G SYSPC+EQV +TC+ALR GF + TIE RL V L VP+FG
Sbjct: 41 IVEVGDLVILFETHNSVTYAYMEKDGVYHNRHGAFHHNDMIGQRFGTKVYSRMSKGYIFILSPTSELWSKALRHRTQIVFTLDASAILFNTHCCPGKIVIESGTGSGALTTSFARAVQPNGHVYTFEFNATRAKVAKEEFDANGLSKVATIECRDACEQ-----GFPEQLDGKVDIVFLDLPCPWKAVGHAKRALKAGGAFASYSPCMEQVQRTCDALRVDGFDRIRTIETRLMTYCSRTVPLPVPNFG 284
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Match: W4FYX8_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FYX8_9STRA) HSP 1 Score: 250 bits (638), Expect = 2.090e-72 Identity = 126/257 (49.03%), Postives = 161/257 (62.65%), Query Frame = 1
Query: 142 TLNEMSSSPLIRVGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIVGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDIVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEIRATRAQEEFEENALGGLAKVAHRDVCAARVDGGGFGEELDGKADAVFLDLPEPWLAVEHAKLALKPGKKVCSYSPCIEQVMKTCEALRFSGFHSVTTIEFRLRNINYTEVQLDVPDF 912
T + + ++ GD+VV FE I + +K I+Q RHGAFHH++I+G +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S + F+ PG IV+ESGTGSG ++TA RT+AP G +++FEFN RA A+EEF N L + + RD C GF E L GK D VFLDLP PW AV HAK LK SYSPC+EQV +TC+ALR GF V TIE RL + V L VP F
Sbjct: 18 TFSMWAGKTIVEAGDLVVLFETHNSITYAYVKPDEIYQNRHGAFHHNDIIGNRYGAKVYSRMSKGYIYILSPTPELWSKALRHRTQIVFTLDASAITFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKEEFIANGLENVVTIECRDACEQ-----GFPEHLAGKVDVVFLDLPCPWKAVGHAKKMLKHHGAFASYSPCMEQVQRTCDALRLDGFDRVRTIETRLMPYSARTVALPVPSF 269
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Match: A0A024TN05_9STRA (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TN05_9STRA) HSP 1 Score: 249 bits (637), Expect = 2.650e-72 Identity = 122/248 (49.19%), Postives = 159/248 (64.11%), Query Frame = 1
Query: 169 LIRVGDMVVFFEGREPIGFDRMKAKTIWQCRHGAFHHDEIVGKPFGSRVFSRTTKGYVYALSPTPELWSHVVPNRTQIVQDFDQSIVIFRLDLKPGDIVVESGTGSGVMSTAIMRTIAPSGFLHSFEFNEIRATRAQEEFEENALGGLAKVAHRDVCAARVDGGGFGEELDGKADAVFLDLPEPWLAVEHAKLALKPGKKVCSYSPCIEQVMKTCEALRFSGFHSVTTIEFRLRNINYTEVQLDVPDF 912
++ GD+V+ FE I + +K I+Q RHGAFHH++I+G +G++V+SR +KGY+Y LSPTPELWS + +RTQIV D S +IF+ PG IV+ESGTGSG ++TA RT+AP G +++FEFN RA A++EF N L + + RD C GF + L GK D VFLDLP PW AV HAK LK SYSPC+EQV +TC+ALR GF + TIE RL + V L VP F
Sbjct: 28 IVEAGDLVILFETHNSITYTYVKPDEIYQNRHGAFHHNDIIGNRYGAKVYSRISKGYMYVLSPTPELWSKALRHRTQIVFTLDASSIIFQTHCAPGKIVIESGTGSGALTTAFARTVAPHGHVYTFEFNATRAQVAKDEFHANGLDSVVTIECRDACEQ-----GFPDHLAGKVDVVFLDLPCPWKAVGHAKKMLKHNGAFASYSPCMEQVQRTCDALRLDGFDRIRTIETRLMPYSARTVHLPVPSF 270 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig140.44.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig140.44.1 >prot_P-littoralis_Contig140.44.1 ID=prot_P-littoralis_Contig140.44.1|Name=mRNA_P-littoralis_Contig140.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=589bp MDFRAGRSPDGFRDPSTLNEMSSSPLIRVGDMVVFFEGREPIGFDRMKAKback to top mRNA from alignment at P-littoralis_Contig140:221148..228946- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig140.44.1 ID=mRNA_P-littoralis_Contig140.44.1|Name=mRNA_P-littoralis_Contig140.44.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7799bp|location=Sequence derived from alignment at P-littoralis_Contig140:221148..228946- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig140:221148..228946- >mRNA_P-littoralis_Contig140.44.1 ID=mRNA_P-littoralis_Contig140.44.1|Name=mRNA_P-littoralis_Contig140.44.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1767bp|location=Sequence derived from alignment at P-littoralis_Contig140:221148..228946- (Pylaiella littoralis U1_48)back to top |