mRNA_P-littoralis_Contig14.94.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI) HSP 1 Score: 214 bits (545), Expect = 4.120e-66 Identity = 130/186 (69.89%), Postives = 142/186 (76.34%), Query Frame = 2
Query: 32 TRSIKIIFQGTSRDVEVAADQATPAGLQAAIASAFEADLPPRSGDDEPPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVEPANKHDREHRLYKMAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDL 589
T SIKI FQG SRDV V A T LQAAIA+AF+A+LP RS E KD+DL FTYKDPDGD IVFDKDSEL LA+RLCPSSLEISAA KE +PANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLVKQGLAP+VLLA +K E A + A + PLGD NEDL
Sbjct: 18 TSSIKINFQGASRDVNVPAP-VTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKES-KPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDL 196
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI) HSP 1 Score: 218 bits (555), Expect = 1.610e-65 Identity = 130/186 (69.89%), Postives = 143/186 (76.88%), Query Frame = 2
Query: 32 TRSIKIIFQGTSRDVEVAADQATPAGLQAAIASAFEADLPPRSGDDEPPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVEPANKHDREHRLYKMAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDL 589
T SIKI FQGTSRDV V T A LQAAIA AF+A+LP RS E KD+DL FTYKDPDGD IVFDKDSEL+LA+RLCP SLEISAAGKE +PANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFL+LNP+RLVKQGLAP+VLLA +K E A + A + PLGD NEDL
Sbjct: 3 TSSIKINFQGTSRDVNVPVP-VTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKEN-KPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDL 181
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI) HSP 1 Score: 211 bits (537), Expect = 1.720e-63 Identity = 131/195 (67.18%), Postives = 144/195 (73.85%), Query Frame = 2
Query: 5 NNMNTSTTATRSIKIIFQGTSRDVEVAADQATPAGLQAAIASAFEADLPPRSGDDEPPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVEPANKHDREHRLYKMAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDL 589
NN NT TT+ SIKI FQG SRDV V A T A LQA IA+AF+A+LP RS E KD+DL FTYKDPDGD IVFDKDSEL LA+RLCP SLEISAAGKEK + A D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLVKQGLAP+ LL +K E A + A + PLGD NEDL
Sbjct: 12 NNDNTMTTS--SIKINFQGASRDVNVPAP-VTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEK-KAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANN-----AKVSKVPLGDGKNNEDL 197
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.020e-62 Identity = 133/198 (67.17%), Postives = 145/198 (73.23%), Query Frame = 2
Query: 2 NNNM--NTSTTATRSIKIIFQGTSRDVEVAADQATPAGLQAAIASAFEADLPPRSGDDEPPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVEPANKHDREHRLYKMAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDL 589
NNN N T T SIKI FQG SRDV V A + A LQAAIA+AF+A+LP RS E KD+DL FTYKDPDGD IVFDKDSEL LA+RLCPSSLEISA KE EPA K D E RLYK+AARNLREYNGVPSMT KL KTLAFLKLNP+RLVKQGLAP+VLLA +K E A + A + PLGD NEDL
Sbjct: 9 NNNRYNNDKTMTTPSIKINFQGASRDVNVPAPVSL-ASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKES-EPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDL 199
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE) HSP 1 Score: 206 bits (524), Expect = 1.660e-61 Identity = 127/192 (66.15%), Postives = 139/192 (72.40%), Query Frame = 2
Query: 14 NTSTTATRSIKIIFQGTSRDVEVAADQATPAGLQAAIASAFEADLPPRSGDDEPPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVEPANKHDREHRLYKMAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDL 589
N T T SIKI FQG SRDV V A AT A LQAAIA+ FE +LP RS E KD+DL FTYKDPDGD IVFDKDSEL+LALRLCP SLEISAAGKE + D E LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLVKQGLAP++LLA +K E A + A + LGD NEDL
Sbjct: 24 NDKTMTTSSIKINFQGASRDVSVPAP-ATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKEN-KATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANN-----AKLSKVRLGDGKNNEDL 208
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE) HSP 1 Score: 205 bits (521), Expect = 4.880e-61 Identity = 123/189 (65.08%), Postives = 136/189 (71.96%), Query Frame = 2
Query: 23 TTATRSIKIIFQGTSRDVEVAADQATPAGLQAAIASAFEADLPPRSGDDEPPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVEPANKHDREHRLYKMAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDL 589
T T SIKI FQG SRDV V A LQAAIA+AF+ +LP RS E D+DL FTYKDPDGD IVFDK+SEL LALRLCP SLEISAAGKE + D E +LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLVKQGLAP+VLLA +K E A + A + PLGD NEDL
Sbjct: 18 TMTTSSIKITFQGASRDVNVRVPVML-ASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKEN-KATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDL 199
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 207 bits (526), Expect = 7.540e-61 Identity = 128/186 (68.82%), Postives = 142/186 (76.34%), Query Frame = 2
Query: 32 TRSIKIIFQGTSRDVEVAADQATPAGLQAAIASAFEADLPPRSGDDEPPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVEPANKHDREHRLYKMAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDL 589
T SIKI FQGTSR+V V A T A LQA IA+AF+A+LP RS E KD+DL FTYKDPDGD IVFDKDSEL+LA+RLCP SLEISAAGKE +P NK D E RLYK+AARNLREYNGVPSMT KL KTLAFLKLNPRRLVKQGLAP+ LLA +K E A +N + T LGD + NEDL
Sbjct: 3 TSSIKINFQGTSRNVNVQAPF-TLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKEN-KPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAE-AANNMKVSKVT----LGDGENNEDL 181
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 1.230e-8 Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 2
Query: 350 LYKMAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVL 490
LYK AARNLREY+GVPSMT L KT+ L+L P RLV QGLAP+ +
Sbjct: 53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 2.730e-8 Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 2
Query: 350 LYKMAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLL 493
++K AARNLREY+GVPS+TP L T+ L+L P RLV QGLAP++LL
Sbjct: 41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILL 88
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Match: A0A6H5KBH6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH6_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 6.180e-8 Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 2
Query: 350 LYKMAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLL 493
LYK AARNLREY+GVPS+T L KT+ L+L P RLV QGLAP+ L
Sbjct: 57 LYKAAARNLREYHGVPSITVGGLEKTMVLLQLRPGRLVAQGLAPKQFL 104 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.94.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig14.94.4 >prot_P-littoralis_Contig14.94.4 ID=prot_P-littoralis_Contig14.94.4|Name=mRNA_P-littoralis_Contig14.94.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=193bp MNTSTTATRSIKIIFQGTSRDVEVAADQATPAGLQAAIASAFEADLPPRSback to top mRNA from alignment at P-littoralis_Contig14:413554..415984+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig14.94.4 ID=mRNA_P-littoralis_Contig14.94.4|Name=mRNA_P-littoralis_Contig14.94.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=2431bp|location=Sequence derived from alignment at P-littoralis_Contig14:413554..415984+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig14:413554..415984+ >mRNA_P-littoralis_Contig14.94.4 ID=mRNA_P-littoralis_Contig14.94.4|Name=mRNA_P-littoralis_Contig14.94.4|organism=Pylaiella littoralis U1_48|type=CDS|length=579bp|location=Sequence derived from alignment at P-littoralis_Contig14:413554..415984+ (Pylaiella littoralis U1_48)back to top |