mRNA_P-littoralis_Contig14.94.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig14.94.3
Unique Name	mRNA_P-littoralis_Contig14.94.3
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 3.940e-91
Identity = 193/329 (58.66%), Postives = 218/329 (66.26%), Query Frame = 1

Query:   73 SIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDGAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDLAESVAAGVEAMRGEDDDKKEWNDGFVSVEPAQSAAPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVGYKRV 1059
            SIKI FQG SRDV V     TLA LQAAIA AF+A+LP RS    A KD+DL FTYKDPDGD IVFDKDSEL+LA+RLCP SLEISAAGKE  KPANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFL+LNP+RLVKQGLAP+VLLA +K E A +     A   + PLGD   NEDLAESVAAG+E M  EDD KKEWNDGFVSVEPA +++P +                                            A + K+ +   +HKAF+AGGI+L PREV PLLVAL V P RL KLG VN + LRAM    K+V
Sbjct:    5 SIKINFQGTSRDVNVPVP-VTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKEN-KPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDD-KKEWNDGFVSVEPADTSSPGNDNEEKNDAV-----------------------------------APEVKKNL---IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKKV 287

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BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 6.770e-88
Identity = 189/328 (57.62%), Postives = 214/328 (65.24%), Query Frame = 1

Query:   73 SIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDGAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDLAESVAAGVEAMRGEDDDKKEWNDGFVSVEPAQSAAPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVGYKR 1056
            SIKI FQGASRDV V A   TLA LQA IA+AF+A+LP RS    A KD+DL FTYKDPDGD IVFDKDSEL LA+RLCP SLEISAAGKEK K A   D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLVKQGLAP+ LL  +K E A +     A   + PLGD   NEDLAESVAAG+E M  EDD KKEWNDGFVSVEPA +++P +                                            A + K+ +   +HKAF+AGGI+L PREV PLLVAL V P RL KLG V+ + LRAM    K+
Sbjct:   21 SIKINFQGASRDVNVPAP-VTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEK-KAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSLEDD-KKEWNDGFVSVEPADTSSPDNDNEEKNDAV-----------------------------------APEVKKNL---IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKK 302

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BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 8.260e-87
Identity = 220/439 (50.11%), Postives = 253/439 (57.63%), Query Frame = 1

Query:   73 SIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDGAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDLAESVAAGVEAMRGEDDDKKEWNDGFVSVEPAQSAAPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVGYKRVNNTQ--------------QRMA----RGSAGAACSSPWG---PCGRMMPRGG---GAGGGACGRR-DAGAAGAGHRMGKMCGGRGKPCGR---GMMIGLHPHAPACLPPP 1305
            SIKITFQGASRDV V      LA LQAAIA+AF+ +LP RS    A  D+DL FTYKDPDGD IVFDK+SEL LALRLCP SLEISAAGKE  K     D E +LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLVKQGLAP+VLLA +K E A +     A   + PLGD   NEDLAESVAAG+E M  ED  KKEWNDGFVSVEPA+ + PA+                                            A + K+ +   +HKAF+AGGI+L PREV PLLVAL V P RL KLG V  + LRAM    K+  + +              +RMA    RG  G     P G     G + P  G   G+G GA GR  +AGA       GKM   R   CG+   GMM+    H  A +PPP
Sbjct:   23 SIKITFQGASRDVNVRVP-VMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKEN-KATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDG-KKEWNDGFVSVEPAEISFPANDNEEKNDA------------------------------------APEAKKNL---IHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKKTAHKRHGPGHAGLQHLGHVERMAHSGPRGPTGGFARGPAGLIMRVGSVRPGAGPSPGSGSGASGRTPEAGANVVPLGRGKM---RAVFCGKPRVGMMMPRRCHPHAGMPPP 411

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BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 2.170e-84
Identity = 186/328 (56.71%), Postives = 212/328 (64.63%), Query Frame = 1

Query:   73 SIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDGAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDLAESVAAGVEAMRGEDDDKKEWNDGFVSVEPAQSAAPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVGYKR 1056
            SIKI FQGASRDV V A  ATLA LQAAIA+ FE +LP RS    A KD+DL FTYKDPDGD IVFDKDSEL+LALRLCP SLEISAAGKE  K     D E  LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLVKQGLAP++LLA +K E A +     A   +  LGD   NEDLAE VAAG+E M  EDD KKEWNDGFVSVEPA++++  +                                            A + K+ +   +HKAF+AGGI+L PREV PLLVAL V P RL KLG V+ + LRAM    K+
Sbjct:   32 SIKINFQGASRDVSVPAP-ATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKEN-KATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANN-----AKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDD-KKEWNDGFVSVEPAETSSSDNGNEEENDDA-----------------------------------APEVKQNL---IHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKK 313

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BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 2.350e-83
Identity = 187/328 (57.01%), Postives = 210/328 (64.02%), Query Frame = 1

Query:   73 SIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDGAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDLAESVAAGVEAMRGEDDDKKEWNDGFVSVEPAQSAAPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVGYKR 1056
            SIKI FQGASRDV V A   +LA LQAAIA+AF+A+LP RS    A KD+DL FTYKDPDGD IVFDKDSEL LA+RLCPSSLEISA  KE  +PA K D E RLYK+AARNLREYNGVPSMT  KL KTLAFLKLNP+RLVKQGLAP+VLLA +K E A +     A   + PLGD   NEDLAESVAAG+E M  EDD KKEWNDGFVS E   SAA                                               A + K+ +   +HKAF+ GGI+L PREV PLLVAL V P RL KLG V+ + LRAM    K+
Sbjct:   23 SIKINFQGASRDVNVPAP-VSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKES-EPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDD-KKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDA-------------------------APETKKDL---IHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKK 314

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BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 1.750e-80
Identity = 185/322 (57.45%), Postives = 209/322 (64.91%), Query Frame = 1

Query:   73 SIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDGAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDLAESVAAGVEAMRGEDDDKKEWNDGFVSVEPAQSAAPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAM 1038
            SIKI FQG SR+V V A   TLA LQA IA+AF+A+LP RS    A KD+DL FTYKDPDGD IVFDKDSEL+LA+RLCP SLEISAAGKE  KP NK D E RLYK+AARNLREYNGVPSMT  KL KTLAFLKLNPRRLVKQGLAP+ LLA +K E A +N   +  T    LGD + NEDLAESVAAG+E M  EDD KKE N+GFVS +P  SAA                                               A + K+ +   +H AF+AGGI+L PREV PLLVAL V P RL KLG VN ++LRAM
Sbjct:    5 SIKINFQGTSRNVNVQAPF-TLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKEN-KPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAE-AANNMKVSKVT----LGDGENNEDLAESVAAGMELMSVEDD-KKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDA-------------------------APEVKKNL---IHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAM 290

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BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 1.400e-76
Identity = 171/293 (58.36%), Postives = 192/293 (65.53%), Query Frame = 1

Query:   73 SIKITFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRSGDDGAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLGDDDCNEDLAESVAAGVEAMRGEDDDKKEWNDGFVSVEPAQSAAPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIKLLPRE 951
            SIKI FQGASRDV V A   TL  LQAAIA+AF+A+LP RS    A KD+DL FTYKDPDGD IVFDKDSEL LA+RLCPSSLEISAA KE  KPANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLVKQGLAP+VLLA +K E A +     A   + PLGD   NEDLA+SVAAG+E M  ED  KKEWNDGFVS   A+S APA+                                            A + K+ +   +HKAF+AGGI+L PRE
Sbjct:   20 SIKINFQGASRDVNVPAP-VTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKES-KPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLADSVAAGMELMSVED--KKEWNDGFVS---AESDAPAAAAPITAETSSPDNDKEEENDDA----------------------APEVKKNL---IHKAFIAGGIQLRPRE 275

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BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.930e-7
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1

Query:  385 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVL 525
            LYK AARNLREY+GVPSMT   L KT+  L+L P RLV QGLAP+ +
Sbjct:   53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99

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BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.480e-7
Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 1

Query:  385 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLLA--DVKGENAKSNENTAAATQQHPLGDDDCNEDLAESVAAG 645
            ++K AARNLREY+GVPS+TP  L  T+  L+L P RLV QGLAP++LL      G +A S + +     +    ++  + DL+ + + G
Sbjct:   41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAGVDADSTDGSGGFEAEEEQANNQFSHDLSSNSSDG 129

[Close]

BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Match: A0A6H5KBH6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH6_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 9.400e-7
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 1

Query:  385 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVKQGLAPQVLL 528
            LYK AARNLREY+GVPS+T   L KT+  L+L P RLV QGLAP+  L
Sbjct:   57 LYKAAARNLREYHGVPSITVGGLEKTMVLLQLRPGRLVAQGLAPKQFL 104

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig14.94.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
D8LN68_ECTSI	3.940e-91	58.66	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LN66_ECTSI	6.770e-88	57.62	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JPU3_9PHAE	8.260e-87	50.11	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KAY7_9PHAE	2.170e-84	56.71	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JQ17_9PHAE	2.350e-83	57.01	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KB69_9PHAE	1.750e-80	57.45	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LN82_ECTSI	1.400e-76	58.36	PB1 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KI70_9PHAE	1.930e-7	65.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JCG1_9PHAE	3.480e-7	40.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KBH6_9PHAE	9.400e-7	64.58	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig14	contig	P-littoralis_Contig14:402424..407881 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	2839
Hectar predicted targeting category	other localisation
Exons	3
Cds size	1527

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789648.995121-CDS-P-littoralis_Contig14:402423..402777	1680789648.995121-CDS-P-littoralis_Contig14:402423..402777	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig14 402424..402777 +
1680789649.004704-CDS-P-littoralis_Contig14:405384..406437	1680789649.004704-CDS-P-littoralis_Contig14:405384..406437	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig14 405385..406437 +
1680789649.0181258-CDS-P-littoralis_Contig14:406449..406569	1680789649.0181258-CDS-P-littoralis_Contig14:406449..406569	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig14 406450..406569 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789649.0269709-UTR-P-littoralis_Contig14:406569..407881	1680789649.0269709-UTR-P-littoralis_Contig14:406569..407881	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig14 406570..407881 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig14.94.3	prot_P-littoralis_Contig14.94.3	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig14 402424..406569 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig14:402424..407881+
coding sequence from alignment at P-littoralis_Contig14:402424..407881+

protein sequence of mRNA_P-littoralis_Contig14.94.3

>prot_P-littoralis_Contig14.94.3 ID=prot_P-littoralis_Contig14.94.3|Name=mRNA_P-littoralis_Contig14.94.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=509bp
MNTNNTNTTINTINNMSTSTTATRSIKITFQGASRDVEVAADQATLAGLQ
AAIASAFEADLPPRSGDDGAPKDSDLRFTYKDPDGDSIVFDKDSELSLAL
RLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTK
LTKTLAFLKLNPRRLVKQGLAPQVLLADVKGENAKSNENTAAATQQHPLG
DDDCNEDLAESVAAGVEAMRGEDDDKKEWNDGFVSVEPAQSAAPASSSAT
AAAAAAPAGTTTSDADADADGTAATTGDDNDTDTDTDADEAAKGKRPVDR
PVHKAFVAGGIKLLPREVWPLLVALGVGPRRLVKLGHVNAEHLRAMAVGY
KRVNNTQQRMARGSAGAACSSPWGPCGRMMPRGGGAGGGACGRRDAGAAG
AGHRMGKMCGGRGKPCGRGMMIGLHPHAPACLPPPPPFHMEDEDGMSFAP
APPAGDGGGRRGGRRGGRRGGHGGPRSHSHPHHVPHPHPHGFGDGEGGPV
LAAAPSPG*

mRNA from alignment at P-littoralis_Contig14:402424..407881+

Legend: CDSpolypeptideUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig14.94.3 ID=mRNA_P-littoralis_Contig14.94.3|Name=mRNA_P-littoralis_Contig14.94.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5458bp|location=Sequence derived from alignment at P-littoralis_Contig14:402424..407881+ (Pylaiella littoralis U1_48)
ATGAACACCAACAACACCAACACCACCATCAACACCATCAACAACATGAG
CACCTCCACCACTGCCACCCGTTCGATCAAGATCACCTTCCAGGGCGCAT
CCCGCGATGTCGAAGTTGCGGCTGACCAGGCCACCCTCGCCGGCCTTCAG
GCGGCCATCGCGTCGGCCTTCGAGGCAGACCTGCCTCCCCGCTCCGGGGA
TGATGGGGCACCCAAAGACAGCGACCTGCGGTTCACCTACAAGGATCCCG
ATGGAGACAGCATCGTGTTCGACAAGGACTCGGAGCTGAGCCTGGCCCTG
CGCCTGTGCCCCAGCTCGCTTGAGATCTCGGCCGCCGGCAAGGAGAAGGT
GAAGGTAAGCGGAGAGTCCGATCTACAGCAGTATCCCAGGACATGGTGTG
TTCTCTCCTGCCCCTGCCTTGTCTGATGGCCGCCGTAAATAGGACGCGGT
GTCGACAAGTGTGGGCGCCCTCCTCTACTATTTCCTTGCAGCAGTAGTTG
CGCCCGTCGGGTACTCGCGTACCCAGTACACGCCATGTTGAGTTGACGTT
GTTGGACAAAGCATTCCACTTCAGTGACGCCGGATTTAGCGGCGGGCGAC
TCCATGATACAGTACGTGATTGAAAGCAAGTCCGCCGGAACAGGATACCA
CACAGACAACAACGCGAGAGTTAAACTTGGCCGCCGCCGCCGCCGCTGTG
GAAGCCTTCCTGTCGCACTGATTGTTTCCTCTCCAAGCCGGCTTCGAGGT
TTTTCCTCCAATCTGGCTTCGTGCCCTGCGTAGCTTTATTTACGGTAGTT
GTTTTATCCCGACGAAAGTCCATTACAAAGTCCATCACAAGTCTTCATTC
GTTTGTCAGGGCATGTCTTTGAAAGAAAAAACGAGGTGTGGAACGGGGAA
CGTGAAACCTAGATTCCTTGTTCCCCGTTCTACCCTTTGTGTCTTGGAAA
AAAAAAGACTACTACGAAATGAAGGGCGTGTTTGTTTTTCCTCCAAGCTG
GCTTCGTGCCCTGCGTAGCTTTATTTAAGGCAGTTGTTTATCCCGACGAA
AGTCCATTACAAAAACCATCACAAGTCTTCATTCGTTTGTCAGGGCATGT
CTTGGAAGAAAAAACGAGGTGTGGAACGGGGAACGTGGAACCTAGATTCC
TTGTTCCCTGTTCCCCGCTTTGTGTCTTGGAAAAAAAAGACTACCTGGTA
CTTCGAAACCACCATCACTATGCCAAGGATGATGCAAACAGCACAAATAT
AGATCGTAAACACTCAACTCATGGTGTAACGTGTGTCACACAAGACGACC
ACCAAATTGTCTTGTTGAGCCTGATACCCTCAGGGGAGCTGCAACGGTAC
ACTGGTTGTTGAGTATAGAAATACTGGTAGACGTATTTCACTCTTTGTGT
TCGTTGCAATATCTGGTCGAGATCCTTGTCTGGAGAGAGACGAACACATT
GATGTCTTGGTAAGTTAAAAAAAAAAAAAATGAATAACGTGGAACCGTTT
GCATGCGAAAAGCCTGAGGGTCGCTGTTGTTGTGGTGCAAGTACAGAGGT
GCAGTAAAGTAGCAGTAAAGTACCGTGACCGTTGAGGGTTATTCAACACC
ACACACACACACGCACGCACGAATCTGTCCATCTCCCATCTCTCGCCCAC
AGAGCATACAGACATACACATACATTCAGTACACACACAGCATAGCACAC
AATGATGTCAGATATGGTTTCATGTCGGCCGGCCGCAGTCGTCCGCGCGC
CCGTTTGGCCAAAAAGCGGAGGAACAAACAGACGAGGTGAGCGATGGTGT
GATCATCTTTTCTCTGCTGTTCTTCTTGCTGCTGCAGTACGGTGACTTTG
TTCATGCGAGTGAGAGGGCTTATATATTACGGTTAATTCTACGGGTGGCG
CTAGGCGGGATGGCATGATTGTGGGGGGAGCTAGCTGTGCATCTGTGTAT
GCGTGTGTTTGCCTTGTGTGTGTGGTATGGGTTTTTTTGTGGTCAGATAG
AGGGAGAAAGCTACTGGAGAGTTCTTGCCCCCCAGTAGCCCGTTCCACAC
AGGCTTTTGGACAATTTTAACGAACGGAGGCCTTCCAATTACTTTGGAGG
AGGGAACGAAAAATGTGGAACCCACGGTGGCTGAAATTCTTTCCAGGAAT
GTTTTTTGCTGAGGTTGGCCAATCAGAGGATTATTCTAGGTTACACGTTG
CACGTTCCACACCTCGTTTTTTTTTCCAAGACATGCCCTCACAGGCATTG
CTGTGTAATCATGCTGCTGTGTGCACACATCTTATTTGTATATACATCAC
ACACACATTGTATGTATGATAAATCACATGATACAAGTACTTCGTTTCGC
GTATCATTTATCTCTCACACGGCGCCTTCCATTGCTACATGTCGGCTCCG
GAGACGTGGCCCCGCCGACCGACAAACATGGCTCTCTCTCTCTGTAGCTG
TTTGTATATACAACCCGTCGTTCCATGTTGCGTGCAGGGGGGGGATATGT
CCCATCTATTCCTGTCCGCCCGAAATTGGCCCCGAACAGCATTAGTGCGA
ATTACTACTTCCTGTGTTTGGACGGTCCATGACGCGTGTTTTTCTTTTCC
CTATCTGACTCCTGACCTATGTGAATGGTTGTGCCTAACTATGATACTCT
GCTGTATCATCTGCTGTGACAATACTTGAAGTAGTTCCGTTCGTGAGCTC
GATTCTCGTCATCTTCCCAAGAGTAGCCTCGCTCGTGTCACACGTTTTTG
GTTGTACAACGATGCGCTTCTACAGCTGTGTTTTATCATATGGAAGTAGT
TTAGTTCTGGCCATGAACTGATTTTGTGTTTCCTTGTGTATCCACAACAA
ACAGCAGTTTGTCTGGTTCACCATTCAGGGTATCTCAACCTCCCCTCCCC
TCCCCTCTCCCCCCCCCGCCTCTGCGCCTCTCCTGTCCATTCCACCTCTC
TTTACTTCCAGCCCGCCAACAAGCACGACCGCGAACACAGGCTGTACAAG
GTGGCCGCCCGTAACCTCCGCGAGTACAACGGCGTGCCCTCGATGACCCC
GACGAAGCTCACCAAGACCCTGGCATTCCTCAAGCTGAACCCGCGCCGCC
TCGTGAAGCAGGGCCTGGCCCCCCAAGTGCTTCTGGCTGACGTCAAGGGC
GAAAACGCCAAAAGCAACGAGAACACGGCGGCGGCAACGCAGCAGCATCC
TCTAGGCGACGACGACTGCAACGAGGACCTCGCCGAATCGGTCGCCGCCG
GCGTCGAGGCGATGAGGGGGGAAGATGACGACAAGAAGGAGTGGAACGAC
GGTTTCGTGTCTGTTGAGCCCGCCCAGTCAGCCGCTCCTGCTTCCTCTTC
GGCAACCGCCGCCGCGGCGGCGGCACCCGCTGGAACTACGACCTCCGATG
CCGATGCCGACGCCGATGGCACCGCTGCCACCACTGGGGACGACAACGAC
ACCGACACCGATACCGACGCTGATGAGGCCGCCAAGGGAAAGCGCCCCGT
GGATCGCCCCGTGCACAAGGCCTTCGTCGCGGGCGGCATCAAGCTTTTGC
CCCGCGAGGTCTGGCCCCTGCTCGTCGCCCTGGGCGTCGGACCCCGCCGT
CTGGTCAAGCTCGGTCACGTCAACGCCGAGCACCTCCGGGCCATGGCGGT
TGGGTACAAGAGGGTGAACAACACGCAGCAGCGCATGGCCCGCGGCAGTG
CTGGTGCTGCGTGTAGTAGCCCCTGGGGGCCTTGCGGCCGCATGATGCCG
AGGGGCGGCGGTGCTGGTGGTGGTGCTTGCGGCCGCCGCGATGCCGGTGC
TGCGGGTGCGGGACACAGGATGGGAAAAATGTGCGGCGGCCGTGGGAAGC
CCTGTGGACGAGGCATGATGATAGGCCTCCACCCTCACGCCCCCGCCTGC
CTCCCCCCCCCGCCCCCGTTCCACATGGAGGACGAGGACGGGATGTCGTT
CGCTCCCGCTCCCCCTGCCGGTGATGGTGGCGGTCGCCGCGGTGGTCGCC
GCGGTGGTCGCCGCGGTGGTCACCGTGGTGGTCACGGCGGTCCTCGCTCC
CACTCTCACCCCCACCACGTCCCCCACCCCCACCCTCACGGGTTCGGGGA
CGGAGAGGGAGGTCCGGTTTTGGCCGCGGCCCCCTCCCCGGGATGAAGGG
AATGCTTCGGGCTCTTGGTCGCCAGCGCCAGCATCAGCACCAGCACCAGC
ACGGCTTCTACTACTGGGGGTGAGACCGCCATCGTCTCGACATCGAAGGA
GGAGCCTCGCTTTATTCTGAGGATACTAGCCTGATATCTGCAGCTCATGC
TTGGATGCTAGTGCTGTGCGTATGTCGGTAGGTCTCCTTGTTTTGGTATA
ATTTGCAAATGGGCAGAAGCCTCCCTCGGAAGAATCGATACGAGGGGCGG
AGAACGGAAGGTTTGACAATACGAGAACCATTTCACCCGTCAGGCTTTTG
CGCTCATGCAGTACAACAAACGACGAGCGACGCAGATCATTTTTGGTTTT
GCTTACAAACAACCGTCCCCACGTCGACGGACGAACGAGTTATATTTTTA
TTATACGAACGGTACTAGTATCAATGCCTTGGTTATTTTCTTCTCACTTG
CTTATATCTCGAGAAGTGCGTGCGCATTGTAGATTGTTGCGGTCGACCGA
CGCAGAATCGATGGTCGCGGTACGTCGCGCGAGGATAGGGGTCGTTAGAG
TTGGGTGTAAGGTTGGGAAGAGTTGGGAGATAGGGCTTGCACTACTTGTT
GTCCAGACGAAGAGTACCGGGGAGTAAGTCGTTCATGAACAAAAAAAGGG
TTGCATGCGCATTTGCGTGCCGGATTATTCTCAAGAGCAGGATATATCGA
GGTGATGACCAGTAGCGTAAAAAGTGACAACACATTGTCGGAAGTCGGGA
GGTGAAAGCAGTAGCAGTCGCACGGACTGAACTACTTTGCTGGTGACTGT
AGGAGCCTCAATAGGACGCTAAATTTAAGTTAGTGGAAGGGCTTGGTCCG
ATCAGAAGGCTAGCTTGCAAGTACAGCATTGAACGAGTCAGGGCTTTTGG
ATCTTGGCTGAGGGAGACGCACGTCGCGCAGCGGTGTGTCTCTTCTCAAG
GGTGCGTGTAGGTTTCGTGTTTGAATAGCAGCAAGGACAGGGCGGTGTGT
TGTACTGTGAGCGTTTGACGTGGTGCTTTTCTTGAGTCCTTGATGCTGCT
ACTGCTGTTGCAGCTGCTGATAAATTTCTAGGGTGGGGCCGTCGTGCAGC
AACATGGGTCTAAGTACACGGGGGGGTTGTTTTTGGAATAAACATGGAGA
AAAGCTTGAAGCTAGCTGTGTTTCAAGGAACATTTGAATGGATGTTACTT
CGAGAAAGATAATACTCCGGAGTACAAGACAAGAGAAAAATGGGGACCTT
CGAGGTCCCAACACAAATTATTACGTCCAGATGTATCACAATGGCATCCG
ATGCACGG

Coding sequence (CDS) from alignment at P-littoralis_Contig14:402424..407881+

>mRNA_P-littoralis_Contig14.94.3 ID=mRNA_P-littoralis_Contig14.94.3|Name=mRNA_P-littoralis_Contig14.94.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1527bp|location=Sequence derived from alignment at P-littoralis_Contig14:402424..407881+ (Pylaiella littoralis U1_48)
ATGAACACCAACAACACCAACACCACCATCAACACCATCAACAACATGAG
CACCTCCACCACTGCCACCCGTTCGATCAAGATCACCTTCCAGGGCGCAT
CCCGCGATGTCGAAGTTGCGGCTGACCAGGCCACCCTCGCCGGCCTTCAG
GCGGCCATCGCGTCGGCCTTCGAGGCAGACCTGCCTCCCCGCTCCGGGGA
TGATGGGGCACCCAAAGACAGCGACCTGCGGTTCACCTACAAGGATCCCG
ATGGAGACAGCATCGTGTTCGACAAGGACTCGGAGCTGAGCCTGGCCCTG
CGCCTGTGCCCCAGCTCGCTTGAGATCTCGGCCGCCGGCAAGGAGAAGGT
GAAGCCCGCCAACAAGCACGACCGCGAACACAGGCTGTACAAGGTGGCCG
CCCGTAACCTCCGCGAGTACAACGGCGTGCCCTCGATGACCCCGACGAAG
CTCACCAAGACCCTGGCATTCCTCAAGCTGAACCCGCGCCGCCTCGTGAA
GCAGGGCCTGGCCCCCCAAGTGCTTCTGGCTGACGTCAAGGGCGAAAACG
CCAAAAGCAACGAGAACACGGCGGCGGCAACGCAGCAGCATCCTCTAGGC
GACGACGACTGCAACGAGGACCTCGCCGAATCGGTCGCCGCCGGCGTCGA
GGCGATGAGGGGGGAAGATGACGACAAGAAGGAGTGGAACGACGGTTTCG
TGTCTGTTGAGCCCGCCCAGTCAGCCGCTCCTGCTTCCTCTTCGGCAACC
GCCGCCGCGGCGGCGGCACCCGCTGGAACTACGACCTCCGATGCCGATGC
CGACGCCGATGGCACCGCTGCCACCACTGGGGACGACAACGACACCGACA
CCGATACCGACGCTGATGAGGCCGCCAAGGGAAAGCGCCCCGTGGATCGC
CCCGTGCACAAGGCCTTCGTCGCGGGCGGCATCAAGCTTTTGCCCCGCGA
GGTCTGGCCCCTGCTCGTCGCCCTGGGCGTCGGACCCCGCCGTCTGGTCA
AGCTCGGTCACGTCAACGCCGAGCACCTCCGGGCCATGGCGGTTGGGTAC
AAGAGGGTGAACAACACGCAGCAGCGCATGGCCCGCGGCAGTGCTGGTGC
TGCGTGTAGTAGCCCCTGGGGGCCTTGCGGCCGCATGATGCCGAGGGGCG
GCGGTGCTGGTGGTGGTGCTTGCGGCCGCCGCGATGCCGGTGCTGCGGGT
GCGGGACACAGGATGGGAAAAATGTGCGGCGGCCGTGGGAAGCCCTGTGG
ACGAGGCATGATGATAGGCCTCCACCCTCACGCCCCCGCCTGCCTCCCCC
CCCCGCCCCCGTTCCACATGGAGGACGAGGACGGGATGTCGTTCGCTCCC
GCTCCCCCTGCCGGTGATGGTGGCGGTCGCCGCGGTGGTCGCCGCGGTGG
TCGCCGCGGTGGTCACGGCGGTCCTCGCTCCCACTCTCACCCCCACCACG
TCCCCCACCCCCACCCTCACGGGTTCGGGGACGGAGAGGGAGGTCCGGTT
TTGGCCGCGGCCCCCTCCCCGGGATGA