mRNA_P-littoralis_Contig14.74.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig14.74.1
Unique NamemRNA_P-littoralis_Contig14.74.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 3.120e-97
Identity = 199/329 (60.49%), Postives = 223/329 (67.78%), Query Frame = 1 
Query:    1 MNTIYINNTNSNMDTSSTATRSIKINFQGAFRDVEVAADQATLAGLQTAIASAFEADLPPRSGDNEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDENAKSNQNTAAATQQHSLGDDDCNEDLAESVAASVEAMRVEEDK-EWNDGFVPVDPALTSDADADHGTAAPTGDXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMATAHKKANNKK 984
            MNTI  NN   N D + T T SIKINFQGA RDV V A   TLA LQ  IA+AF+A+LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL LA+RLCP SLEISAAGKEK K A   D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLV QGLAP+ LL  MK E A +     A   +  LGD   NEDLAESVAA +E M +E+DK EWNDGFV V+PA TS  D D+                  A + K+ +   +HKAF+AGGI L PREV PLLVAL V P RL KLG V+ K L AM  A KK  +K+
Sbjct:    1 MNTIKHNNNRDNNDNTMT-TSSIKINFQGASRDVNVPAP-VTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEK-KAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSLEDDKKEWNDGFVSVEPADTSSPDNDN-----------EEKNDAVAPEVKKNL---IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKTAHKR 307
[Close]
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 2.020e-96
Identity = 193/310 (62.26%), Postives = 212/310 (68.39%), Query Frame = 1 
Query:   58 TRSIKINFQGAFRDVEVAADQATLAGLQTAIASAFEADLPPRSGDNEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDENAKSNQNTAAATQQHSLGDDDCNEDLAESVAASVEAMRVEEDK-EWNDGFVPVDPALTSDADADHGTAAPTGDXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMATAHKKANNKK 984
            T SIKINFQG  RDV V     TLA LQ AIA AF+A+LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL+LA+RLCP SLEISAAGKE  KPANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFL+LNP+RLV QGLAP+VLLA MK E A +     A   +  LGD   NEDLAESVAA +E M VE+DK EWNDGFV V+PA TS         +P  D            K        +HKAF+AGGI L PREV PLLVAL V P RL KLG VN K L AM  A KK  +K+
Sbjct:    3 TSSIKINFQGTSRDVNVPVP-VTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKEN-KPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSVEPADTS---------SPGNDNEEKNDAVAPEVKKNL-----IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKKVAHKR 291
[Close]
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 3.120e-95
Identity = 195/328 (59.45%), Postives = 218/328 (66.46%), Query Frame = 1 
Query:    4 NTIYINNTNSNMDTSSTATRSIKINFQGAFRDVEVAADQATLAGLQTAIASAFEADLPPRSGDNEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDENAKSNQNTAAATQQHSLGDDDCNEDLAESVAASVEAMRVEEDK-EWNDGFVPVDPALTSDADADHGTAAPTGDXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMATAHKKANNKK 984
            NTI  N  N   +  +  T SIKINFQGA RDV V A  ATLA LQ AIA+ FE +LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL+LALRLCP SLEISAAGKE  K     D E  LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLV QGLAP++LLA MK E A +     A   +  LGD   NEDLAE VAA +E M VE+DK EWNDGFV V+PA TS +D         G+         E  +        +HKAF+AGGI L PREV PLLVAL V P RL KLG V+ K L AM  A KKA +K+
Sbjct:   12 NTIKYNRNNRYNNDKTMTTSSIKINFQGASRDVSVPAP-ATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKEN-KATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANN-----AKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEPAETSSSD--------NGNEEENDDAAPEVKQNL------IHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKKAAHKR 318
[Close]
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 4.420e-92
Identity = 199/336 (59.23%), Postives = 224/336 (66.67%), Query Frame = 1 
Query:    1 MNTIYINNTNSNMDTSSTATR-SIKINFQGAFRDVEVAADQATLAGLQTAIASAFEADLPPRSGDNEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDENAKSNQNTAAATQQHSLGDDDCNEDLAESVAASVEAMRVEEDK-EWNDGFVPVDPALTSDADADHGTAAP------TGDXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMATAHKKANNKK 984
            MN I  NN N+  +   T T  SIKINFQGA RDV V A   +LA LQ AIA+AF+A+LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL LA+RLCPSSLEISA  KE  +PA K D E RLYK+AARNLREYNGVPSMT  KL KTLAFLKLNP+RLV QGLAP+VLLA MK E A +     A   +  LGD   NEDLAESVAA +E M VE+DK EWNDGFV    +  SDA A    A P      T D          A + K+ +   +HKAF+ GGI L PREV PLLVAL V P RL KLG V+ K L AM  A KKA +K+
Sbjct:    1 MNAINHNNNNNRYNNDKTMTTPSIKINFQGASRDVNVPAP-VSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKES-EPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFV----SAESDASA---AAVPITAKTSTPDNDNEEENNDAAPETKKDL---IHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKKAAHKR 319
[Close]
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 1.440e-90
Identity = 185/310 (59.68%), Postives = 203/310 (65.48%), Query Frame = 1 
Query:   58 TRSIKINFQGAFRDVEVAADQATLAGLQTAIASAFEADLPPRSGDNEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDENAKSNQNTAAATQQHSLGDDDCNEDLAESVAASVEAMRVEEDK-EWNDGFVPVDPALTSDADADHGTAAPTGDXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMATAHKKANNKK 984
            T SIKI FQGA RDV V      LA LQ AIA+AF+ +LP RS   EA  D+DL FTYKDPDGD IVFDK+SEL LALRLCP SLEISAAGKE  K     D E +LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLV QGLAP+VLLA MK E A +     A   +  LGD   NEDLAESVAA +E M VE+ K EWNDGFV V+PA  S          P  D         EA K        +HKAF+AGGI L PREV PLLVAL V P RL KLG V  K L AM  A KK  +K+
Sbjct:   21 TSSIKITFQGASRDVNVRVP-VMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKEN-KATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDGKKEWNDGFVSVEPAEIS---------FPANDNEEKNDAAPEAKKNL------IHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKKTAHKR 308
[Close]
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 1.210e-88
Identity = 187/311 (60.13%), Postives = 211/311 (67.85%), Query Frame = 1 
Query:   58 TRSIKINFQGAFRDVEVAADQATLAGLQTAIASAFEADLPPRSGDNEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDENAKSNQNTAAATQQHSLGDDDCNEDLAESVAASVEAMRVEEDK-EWNDGFVPVDPALTSDA-DADHGTAAPTGDXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMATAHKKANNKK 984
            T SIKINFQG  R+V V A   TLA LQ  IA+AF+A+LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL+LA+RLCP SLEISAAGKE  KP NK D E RLYK+AARNLREYNGVPSMT  KL KTLAFLKLNPRRLV QGLAP+ LLA MK E A +N   +  T    LGD + NEDLAESVAA +E M VE+DK E N+GFV   P  ++ A      T++P  D            K        +H AF+AGGI L PREV PLLVAL V P RL KLG VN K+L AM  A  KA +K+
Sbjct:    3 TSSIKINFQGTSRNVNVQAPF-TLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKEN-KPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAE-AANNMKVSKVT----LGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNL-----IHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAETKAAHKR 301
[Close]
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 6.400e-85
Identity = 175/291 (60.14%), Postives = 199/291 (68.38%), Query Frame = 1 
Query:    1 MNTIYINNTNSNMDTSSTATRSIKINFQGAFRDVEVAADQATLAGLQTAIASAFEADLPPRSGDNEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLCPSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDENAKSNQNTAAATQQHSLGDDDCNEDLAESVAASVEAMRVEEDKEWNDGFVPVD---PALTSDADADHGTAAPTGDXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPRE 864
            MNTI  NN ++N    +T+  SIKINFQGA RDV V A   TL  LQ AIA+AF+A+LP RS   EA KD+DL FTYKDPDGD IVFDKDSEL LA+RLCPSSLEISAA KE  KPANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLV QGLAP+VLLA MK E A +     A   +  LGD   NEDLA+SVAA +E M VE+ KEWNDGFV  +   PA  +   A+  T++P  D            K        +HKAF+AGGI L PRE
Sbjct:    1 MNTIKHNNCDNNDKMMTTS--SIKINFQGASRDVNVPAP-VTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKES-KPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLADSVAAGMELMSVEDKKEWNDGFVSAESDAPAAAAPITAE--TSSPDNDKEEENDDAAPEVKKNL-----IHKAFIAGGIQLRPRE 275
[Close]
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 6.270e-8
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1 
Query:  376 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVL 516
            LYK AARNLREY+GVPSMT   L KT+  L+L P RLV QGLAP+ +
Sbjct:   53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99
[Close]
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.770e-7
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 1 
Query:  376 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLL 519
            ++K AARNLREY+GVPS+TP  L  T+  L+L P RLV QGLAP++LL
Sbjct:   41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILL 88
[Close]
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Match: A0A6H5KBH6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH6_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 3.000e-7
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 1 
Query:  376 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLL 519
            LYK AARNLREY+GVPS+T   L KT+  L+L P RLV QGLAP+  L
Sbjct:   57 LYKAAARNLREYHGVPSITVGGLEKTMVLLQLRPGRLVAQGLAPKQFL 104
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.74.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LN66_ECTSI3.120e-9760.49PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN68_ECTSI2.020e-9662.26PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAY7_9PHAE3.120e-9559.45PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQ17_9PHAE4.420e-9259.23PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPU3_9PHAE1.440e-9059.68PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB69_9PHAE1.210e-8860.13PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN82_ECTSI6.400e-8560.14PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KI70_9PHAE6.270e-865.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG1_9PHAE2.770e-762.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBH6_9PHAE3.000e-764.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:340147..345171 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1431
Hectar predicted targeting categoryother localisation
Exons4
Cds size1431
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789648.5167797-CDS-P-littoralis_Contig14:340146..3405611680789648.5167797-CDS-P-littoralis_Contig14:340146..340561Pylaiella littoralis U1_48CDSP-littoralis_Contig14 340147..340561 -
1680789648.5288417-CDS-P-littoralis_Contig14:340609..3409211680789648.5288417-CDS-P-littoralis_Contig14:340609..340921Pylaiella littoralis U1_48CDSP-littoralis_Contig14 340610..340921 -
1680789648.5435858-CDS-P-littoralis_Contig14:340984..3413431680789648.5435858-CDS-P-littoralis_Contig14:340984..341343Pylaiella littoralis U1_48CDSP-littoralis_Contig14 340985..341343 -
1680789648.5537212-CDS-P-littoralis_Contig14:344826..3451711680789648.5537212-CDS-P-littoralis_Contig14:344826..345171Pylaiella littoralis U1_48CDSP-littoralis_Contig14 344827..345171 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.74.1prot_P-littoralis_Contig14.74.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig14 340147..345171 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig14.74.1

>prot_P-littoralis_Contig14.74.1 ID=prot_P-littoralis_Contig14.74.1|Name=mRNA_P-littoralis_Contig14.74.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=477bp
MNTIYINNTNSNMDTSSTATRSIKINFQGAFRDVEVAADQATLAGLQTAI
ASAFEADLPPRSGDNEAPKDSDLRFTYKDPDGDSIVFDKDSELSLALRLC
PSSLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTK
TLAFLKLNPRRLVNQGLAPQVLLADMKDENAKSNQNTAAATQQHSLGDDD
CNEDLAESVAASVEAMRVEEDKEWNDGFVPVDPALTSDADADHGTAAPTG
DDDDTDTDADEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGP
RRLVKLGHVNVKHLGAMATAHKKANNKKLRMTRGSAGAAGPCGAGGGACR
RRGAGASGGKPRGPGMAMRGHPHSSFTRLPPPPPPHMEEEDGMFFSHAPP
AGGGSGGFGGCPGGRHGGRRGPHAHSHPHGPHYGPHHGAHHGVHHGVHHG
VYPHPPHHPPHPHPHGFEGGEGGPGFH
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mRNA from alignment at P-littoralis_Contig14:340147..345171-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig14.74.1 ID=mRNA_P-littoralis_Contig14.74.1|Name=mRNA_P-littoralis_Contig14.74.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5025bp|location=Sequence derived from alignment at P-littoralis_Contig14:340147..345171- (Pylaiella littoralis U1_48)
ATGAACACCATCTACATCAACAACACCAACAGCAACATGGATACCTCCTC
TACTGCCACCCGCTCGATCAAGATCAACTTCCAGGGTGCCTTTCGCGATG
TCGAAGTTGCAGCTGACCAGGCCACGCTCGCCGGCCTTCAGACGGCCATC
GCTTCGGCCTTCGAGGCAGACCTGCCTCCCCGCTCCGGGGATAATGAGGC
ACCCAAGGACAGCGACCTGCGGTTCACCTACAAGGACCCCGATGGAGACA
GCATCGTGTTCGACAAGGACTCGGAGCTGAGCCTGGCCCTGCGCCTGTGC
CCCAGCTCGCTTGAGATCTCGGCCGCTGGCAAGGAGAAGGTGAAGGTAAG
AAGAGATAAAAGCAGAGATTGGTTTCACCAGTATTCCAGGATATCACACT
GCTGTAGGGCCTCCTCTCTTGCCCCTGGCCTTGTCTGACGGCGAGGCCGC
CGTACCAGGACGCGGGGTCGACAAGTGTGGACGCCCCTCTCGATTCGTAC
CCTCTAACGGCAGTAGTTGCACCCGTCCGGTACAGCAGTCATTGGTTTAA
TTTTGTTCGGAGACAGCGAATTTGTCCACACTTGCAACATAAAAGTCATT
TTTTTTCTCGGAAGTCCCCTTCAATTACTGACTAGTGTGAATGTGTGTTG
CCATCTTAATTGGACGCCACTCTGCGCACCTTTCGGGTAGGTCCACGCTC
CAACTGGGGTCAGGGTAGCTCTTGTCAAAATTTTTTTTGACCGTATTCAA
AATCAAAAACAAAATTGAAATAGGATTTTGATTCCGTGTTCAGTCCGATC
TGCTGCAGCTTGTGTTTGTCCAAAATCAAAAGCGGATAAAAAAAAAAACA
GGGGTCACAGACAGGTGGTGTGTGATGTGAGCATGCCGTGTCTCGATTCC
AAGACAAATGCGGGAGCTGTCGTGCCTGAAACGAAGAGCACGATGGTGTC
CCACGTCGCTCTGACTCAGGCGCGTTGGTAGTTCTTCGTTTGGGATCGAT
AAACGAAAAACTCGGTAAGAGACGAGCAAGTACGTGTTGCACATCTGCCC
TTTTATGGAGGTAGCGGTTGTTTCAGCTACTCAAACAGCCGTTGAGCAAC
AAAGTTCCTGCACGCTTCTACACACTTGAGTGCTGCTCTCCGGATTCTGG
TCGGAATTCGCTCAAACAAAGTGATCTGTATTCTGCGTCATACCAGCTTT
CTCCGGAGCTAGCACATGTGTACAGCCGAGGTCTACACGTTGTGCTGTGG
TCAGCTGAGCAAACATATGTAGTGTGCACCATGTGCTCCCGGAATGCACA
CCAAATCCCTCTCTTGTCTCATATTCTAGGTCTAATCGTTTTTGAGCCGC
GTTTTTGATCTATTTGCTTGAAGGAAAGTGTTTTTTTCCTTCCCGTTTCG
GAAGAACAAAACTGAAATCCAAAACTTGGTGCGGGCGGATGAATTGTTGA
CATATCAGTGACATATTCTGAGTTTGATTTTTGATGTTTGATTTTTGATT
TTTGAATGGGCCCAAAACGCTTTGACAAGAGTCACCCTCACACAGGGGGA
AGTCAGGCTACTTTTTATGTGTCGAATCTGAATATCAAAAGTGATTCGTT
TTCGATATTTGGCCCAGATCCGGCATGTTATGTGATCAGAAATGGGCCAT
TTTTGATAAAAACATTTTCAATAATCATTTTTGATCCAGCACCAGCTCAG
AAATGAGCCTCATTTCTGATCTACTCCGCATATCAAAAATGATTATTGAA
AACGTTTGAGACTCCGACGCAAGCCATCACACAACACAAGCACCACAGCA
GCAGCAGCAGTACTGCCACATCACTGCTGCTGCTGCTGCTGCTGCTACAT
TATCGCGGGCGGTCAGCGTGTTACTTCCTCGTCGTCACCCGCCAGCAGCG
TGGCCCTTCATCCCATGGCGGCAGCAGCAGAGAGCGACTGATTGCGTTTC
ACCTACAAGCACTCGTACCCTGCTGTGCAGATAGATGCCCTGCATACATG
AGTCATCAAGTCTATACTTGTTCTTGCTACGAATACTGTAGCCTCCCAAA
AAAGCTTGAAATAAATAGGTCTGGGTGTACTCCGAGTAGTTGAGCGGGAG
GGACAACACCTTGTTGTCTAGATGTATAATTTACGCGCGGTGCTGCTCTG
TTCTGGCTGTGACCCAGCGCGTCGTGCTCCATCCCGAGAGGGTGCTGCGC
TGGCTCCAAAATTTTGAAATGTGCTACTACTGCTGTATACTACCCAAACG
GCTCTTCTTGGGATCCTACATATACGATACTGTACTGCTGTACGAAAAAT
ACGTTGTCGAATTTGATAAATTATTTATTTACACATAAGATCTGATGTTG
ATACCACCCTGTGGGAATCGTCAAAATCGAAAACGAATCAGAATTGATAT
TTTGATATTTGACACATAAAAAGTAGCCTCAACACAACAGTTTTTTTTTA
GTCACCCTCACACAGGGGGAAGTCAACACAACAGTTTTTTTTTTTCTCCG
CTTCCCTCTGCGGTGCCTGCCTTGTTTTTGGTTGAGCTTTTATCGCGAGA
ACGGGACAGCGATCCCTTTCCCTCGTCGATGGCACGATCGAATTTTTGTT
TACTCACGAATTAATCGCTTTCCACTTTCACGCGCATTGCGAGAAGAAAA
CCCAGATCGTGTTACTGCACTGGGATTCGAACTCACGCGTGAATGTCACA
AGGTTTCGTGGATTTCCCTACTGAACCACCGGGGCGACCGGTATCTGTAC
CTCAAATATATCAGCGCGCAAGTCAGCAGTATACAGCAAGGCAGCAGCAC
ACAGGTAGCAGTACACAGATTCTTTTGGAAAACCTTTCTGTCGCACTGGT
ATACTTCGTACTTGTCTGAGCCAACGCGTTGGGTTCTCACCCTCGTGCTC
GTGTACCGGTCGCCCCGGTGGTTCAGTTGGTAACCCACGTAACCTTCTGA
CATCCACGCGTGAGTTCGAATCCCAGTGCAGTAACACGATCTGGGTTTTC
TTCTCACAATGCGCGTTAAAGTGGAAAGCGATTAATTCGTGAGTAAACAA
AATTCGATCGTACCATCGACGAGGGAAAGGGATTGCTGTCCCCTTTCTCG
CGATAAAAGCTCAACCAAAACCAAGGCAAGCACCGCAGAGGGAAGTGGAG
AAAAAAAAAAAACTCCTGCGTTGACTTCCCCCTGTGTGACCCCAGTAGGA
GCGTCGACCTACCCGAAAGGTGCAGAGTGGCGTCCAATTAAAGGGATGAC
AACACACACATACACACACTCGTAGTTTTGCTGGTTCGACCGCTGTTAGC
TGGGTGTCATGATTGTTGTTTATTTTGACCTAGCGGGCGCTGTCGTTGCA
CGCTGCTATACCTAGCATCATACGTGCATTTTGCATCGAAAATAGGAGTA
CGAAAATACGAAACACTTGCTCCGCAGCTAATTAGTCTTGGGTCGCGTCT
GCGTGTAAGCTCATCAGACGCGGCCGACCGCCTTTGTGCCTTACCTATCT
GCAGCTGTTTGTGTCCCATTTACCGTATTCCTGCACGTTTGAAACACATT
TTCCCTCTCTGGCTCGTTATTTGTGTCGACCTGATTGACTGCTGTACAAC
AACGCGATACAGCTTCACTTCGTACATGATATGGAAGCAGTCTAGTTGTG
TTCACGAGCTCGATTCTGTATGTGGTATCCCGTGTATTTACCGCAGCTGT
TCACTGTTGTTTTGTCTGATTCACCATTCAGGGTATCTCAACCTCCCCTC
CCCTCCCCTCTCCCCTCCCCTCTCCCCCCCCCGCCTCTGCGCCTCCTCTG
TCCATTCCACCTCTCTTTATACTCCCAGCCCGCCAACAAGCACGACCGCG
AACACAGGCTGTACAAGGTGGCCGCCCGTAACCTCCGCGAGTACAACGGC
GTGCCCTCGATGACCCCGACGAAGCTCACCAAGACCCTGGCATTCCTCAA
GCTGAACCCGCGCCGCCTCGTGAACCAGGGCCTGGCCCCCCAAGTGCTGC
TGGCTGACATGAAGGACGAAAACGCCAAGAGCAACCAGAACACGGCGGCG
GCAACACAGCAGCATTCTCTAGGAGACGACGACTGCAACGAGGACCTCGC
CGAATCGGTCGCCGCCAGCGTAGAGGCGATGAGGGTGGAGGAGGACAAGG
AGTGGAACGACGGTTTCGTTCCTGTTGACCCCGCCCTGTCAGCCGCTCCT
GCTGCTCCTACGGCAACCGCCGTCGCGGCGGCTGCACCCTCTGAAACGAG
CACCTCCGATGCCGACGCCGACCACGGCACCGCCGCCCCCACCGGGGACG
ATGACGACACCGACACCGACGCTGACGAGGCTGCCAAGGGAAAGCGCCCT
GTGGATCGCCCCGTGCACAAGGCCTTCGTCGCGGGCGGCATCATGCTCCT
GCCCCGCGAGGTCTGGCCCCTGCTCGTCGCCCTGGGCGTCGGACCCCGTC
GTCTGGTCAAGCTCGGTCACGTCAACGTCAAGCATCTCGGCGCCATGGCG
ACCGCGCACAAGAAGGCGAACAACAAGAAGCTGCGCATGACCCGCGGCAG
TGCTGGAGCTGCGTGGGGGCCTTGGGGGCCTTGCGGCCCCGATGGCCGCT
CGATGCATAGGGGTCCCTGCGGCGCCGGTGGTGGTGCTTGCCGCCGCCGC
GGTGCCGGTGCTTCCGGGGGAAAGCCCCGCGGACCGGGAATGGCGATGCG
CGGGCACCCCCACTCCTCCTTCACCCGCCTTCCCCCCCCTCCCCCGCCTC
ACATGGAGGAGGAGGACGGCATGTTCTTCTCTCACGCTCCCCCTGCCGGT
GGTGGTAGTGGTGGCTTTGGCGGTTGCCCCGGCGGTCGCCATGGTGGTCG
CCGCGGTCCTCATGCCCACTCCCACCCCCACGGCCCTCACTACGGTCCTC
ACCATGGCGCTCACCACGGCGTTCACCACGGCGTCCACCACGGCGTCTAC
CCTCACCCCCCGCACCATCCCCCCCACCCCCACCCCCACGGGTTCGAGGG
TGGTGAGGGAGGACCCGGATTTCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig14:340147..345171-

>mRNA_P-littoralis_Contig14.74.1 ID=mRNA_P-littoralis_Contig14.74.1|Name=mRNA_P-littoralis_Contig14.74.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1431bp|location=Sequence derived from alignment at P-littoralis_Contig14:340147..345171- (Pylaiella littoralis U1_48)
ATGAACACCATCTACATCAACAACACCAACAGCAACATGGATACCTCCTC
TACTGCCACCCGCTCGATCAAGATCAACTTCCAGGGTGCCTTTCGCGATG
TCGAAGTTGCAGCTGACCAGGCCACGCTCGCCGGCCTTCAGACGGCCATC
GCTTCGGCCTTCGAGGCAGACCTGCCTCCCCGCTCCGGGGATAATGAGGC
ACCCAAGGACAGCGACCTGCGGTTCACCTACAAGGACCCCGATGGAGACA
GCATCGTGTTCGACAAGGACTCGGAGCTGAGCCTGGCCCTGCGCCTGTGC
CCCAGCTCGCTTGAGATCTCGGCCGCTGGCAAGGAGAAGGTGAAGCCCGC
CAACAAGCACGACCGCGAACACAGGCTGTACAAGGTGGCCGCCCGTAACC
TCCGCGAGTACAACGGCGTGCCCTCGATGACCCCGACGAAGCTCACCAAG
ACCCTGGCATTCCTCAAGCTGAACCCGCGCCGCCTCGTGAACCAGGGCCT
GGCCCCCCAAGTGCTGCTGGCTGACATGAAGGACGAAAACGCCAAGAGCA
ACCAGAACACGGCGGCGGCAACACAGCAGCATTCTCTAGGAGACGACGAC
TGCAACGAGGACCTCGCCGAATCGGTCGCCGCCAGCGTAGAGGCGATGAG
GGTGGAGGAGGACAAGGAGTGGAACGACGGTTTCGTTCCTGTTGACCCCG
CCCTCACCTCCGATGCCGACGCCGACCACGGCACCGCCGCCCCCACCGGG
GACGATGACGACACCGACACCGACGCTGACGAGGCTGCCAAGGGAAAGCG
CCCTGTGGATCGCCCCGTGCACAAGGCCTTCGTCGCGGGCGGCATCATGC
TCCTGCCCCGCGAGGTCTGGCCCCTGCTCGTCGCCCTGGGCGTCGGACCC
CGTCGTCTGGTCAAGCTCGGTCACGTCAACGTCAAGCATCTCGGCGCCAT
GGCGACCGCGCACAAGAAGGCGAACAACAAGAAGCTGCGCATGACCCGCG
GCAGTGCTGGAGCTGCGGGTCCCTGCGGCGCCGGTGGTGGTGCTTGCCGC
CGCCGCGGTGCCGGTGCTTCCGGGGGAAAGCCCCGCGGACCGGGAATGGC
GATGCGCGGGCACCCCCACTCCTCCTTCACCCGCCTTCCCCCCCCTCCCC
CGCCTCACATGGAGGAGGAGGACGGCATGTTCTTCTCTCACGCTCCCCCT
GCCGGTGGTGGTAGTGGTGGCTTTGGCGGTTGCCCCGGCGGTCGCCATGG
TGGTCGCCGCGGTCCTCATGCCCACTCCCACCCCCACGGCCCTCACTACG
GTCCTCACCATGGCGCTCACCACGGCGTTCACCACGGCGTCCACCACGGC
GTCTACCCTCACCCCCCGCACCATCCCCCCCACCCCCACCCCCACGGGTT
CGAGGGTGGTGAGGGAGGACCCGGATTTCAC
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