mRNA_P-littoralis_Contig14.50.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 408 bits (1049), Expect = 1.080e-134 Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 1
Query: 1 MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKILLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNRGGEQRERVLEQARREQQSSPA 618
MTVGKQHD YWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKI LPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFN+GGEQRERVLEQARREQQSSPA
Sbjct: 501 MTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNKGGEQRERVLEQARREQQSSPA 706
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Match: D7FZS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS5_ECTSI) HSP 1 Score: 350 bits (898), Expect = 4.430e-121 Identity = 173/206 (83.98%), Postives = 187/206 (90.78%), Query Frame = 1
Query: 1 MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKILLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNRGGEQRERVLEQARREQQSSPA 618
MTVGKQHD YWTSDRMCAQLPAAIA FEL++GPHRQGV IFDNSTGHN YDDDALLAHK+SLAPGGEK ALRVFEDDNG+TVHPT Q+G TLLTDKKI LPKTEAQ+K KGRKFGTGLDKK+YP GT+ T GSPLLGLNKGGEQMLK MGLWRLDGERAKGLVKC NKCKA NA SRQAIAAFN+ G +RER++EQA+REQQ+S A
Sbjct: 1 MTVGKQHDGYWTSDRMCAQLPAAIATFELTHGPHRQGVSIFDNSTGHNTYDDDALLAHKMSLAPGGEKTALRVFEDDNGRTVHPTPQLGGTLLTDKKIFLPKTEAQEKTKGRKFGTGLDKKQYPFGTKATPGSPLLGLNKGGEQMLKGMGLWRLDGERAKGLVKCSNKCKAHNATSRQAIAAFNKDGRERERLVEQAQREQQNSSA 206
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 362 bits (929), Expect = 1.270e-116 Identity = 177/198 (89.39%), Postives = 187/198 (94.44%), Query Frame = 1
Query: 1 MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKILLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNRGGEQRERVLEQAR 594
MTVGKQ D YWTSDRMCAQLPAA+A FEL+NGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEK ALRVFEDDNG+ VHPTFQ GDTLLTDKKI LPKT QKK+KGRK GTGLDKK+YPVGT+VT GSPLLGL+KGGEQMLKEMGLWRLDGERAKGLVKCCNKCKA+NAASRQAIAAFN+GGE+RERVLEQAR
Sbjct: 553 MTVGKQQDGYWTSDRMCAQLPAALATFELTNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKTALRVFEDDNGRMVHPTFQDGDTLLTDKKIFLPKTPEQKKIKGRKHGTGLDKKQYPVGTKVTHGSPLLGLSKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKAENAASRQAIAAFNKGGEERERVLEQAR 750
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Match: A0A6H5JD27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD27_9PHAE) HSP 1 Score: 313 bits (802), Expect = 1.500e-99 Identity = 160/202 (79.21%), Postives = 176/202 (87.13%), Query Frame = 1
Query: 1 MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKILLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNRGGEQRERVLEQARREQQ 606
M VG+QHD YWTSD MCAQLPA IAM EL++GPHRQGVFIFDNSTGHN YD DALLAH I+LAPGGEK ALRVFED +GK V+PTFQ+GDTLLTD+KI LPKTE QKK K RK GT LDK K+PVGT+V SPLLGLNKGGEQML+EMGLWRL GE+ +GLVK CNKCKADNAA+RQAIAAFN+GGE+RERVLEQA EQQ
Sbjct: 368 MPVGQQHDGYWTSDDMCAQLPAIIAMAELTSGPHRQGVFIFDNSTGHNPYDADALLAHNINLAPGGEKVALRVFEDVDGKKVYPTFQLGDTLLTDRKIFLPKTEEQKKNKKRKSGTALDKDKFPVGTKVVLRSPLLGLNKGGEQMLREMGLWRLRGEK-RGLVKGCNKCKADNAAARQAIAAFNKGGEERERVLEQAWWEQQ 568
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Match: A0A6H5KE66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE66_9PHAE) HSP 1 Score: 248 bits (634), Expect = 9.970e-76 Identity = 125/187 (66.84%), Postives = 143/187 (76.47%), Query Frame = 1
Query: 1 MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKILLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNRGG 561
MTVG+QHDRYWTSDRMCA+LPA IAM EL++GPHRQ V IFDNSTGHNAY +DALLAHKI++APGGEK ALRVFEDDNG TV +KK K RK GT LDKKK+ VGT+V +GSPLLG+NKG EQML+EMGLWRL GER +GL++ C KCKA+NAASRQ I AFN+ G
Sbjct: 360 MTVGQQHDRYWTSDRMCARLPAIIAMVELTSGPHRQDVLIFDNSTGHNAYGEDALLAHKINMAPGGEKGALRVFEDDNGNTV-----------------------EKKQKERKNGTALDKKKFSVGTKVVAGSPLLGVNKGAEQMLREMGLWRLGGERKEGLLQICKKCKANNAASRQEITAFNKRG 523
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Match: A0A6H5JT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT56_9PHAE) HSP 1 Score: 162 bits (410), Expect = 1.060e-43 Identity = 99/217 (45.62%), Postives = 130/217 (59.91%), Query Frame = 1
Query: 1 MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKILLPKT---------EAQKK---MKGRKFGTGLDKKKYPVGTRV-TSG--SPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNRGGEQRERVLEQARREQQ 606
MTVG+ D YWT+DRMC Q+P IA+ EL++ PHR V +FDNSTGH AY++ AL+A I PGG + L F DD G VH TF+ GDT+L D + KT EA KK K K G+ L + G +V T+G S L+G KGG+Q+L EMGLW + G+ +++C CK + A + AI AFNRGGE R++ L+ A RE Q
Sbjct: 91 MTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKIGSSLGD--FNAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLEC-KACKEERKAIKAAITAFNRGGEARQQALDDAAREDQ 304
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 165 bits (418), Expect = 1.260e-43 Identity = 99/215 (46.05%), Postives = 127/215 (59.07%), Query Frame = 1
Query: 1 MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKILLPKT---------EAQKK---MKGRKFGTGLDKKKYPVGTRVTSG-SPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNRGGEQRERVLEQARREQQ 606
MTVG+ D YWT+DRMC Q+P IA+ EL++ PHR V +FDNSTGH AY++ AL+A I PGG + L F DD G VH TF+ GDT+L D + KT EA KK K KFG+ L K R T S L+G KGG+Q+L EMGLW + G+ +++C CK + A + AI AFNRGGE R++ L+ A RE Q
Sbjct: 524 MTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKFGSSLGDFKAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLEC-KACKEERKAIKAAITAFNRGGEARQQALDDAAREDQ 737
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE) HSP 1 Score: 164 bits (414), Expect = 3.000e-43 Identity = 97/212 (45.75%), Postives = 129/212 (60.85%), Query Frame = 1
Query: 1 MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKILLPKTE----AQKKM------------KGRKFGTGLDKKKYPVGTRVTSGSP-LLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNRGGEQRERVLE 585
MTVG+ D YW RM Q+P IA+ EL++ PHRQ V +FDNSTGH+A+ AL+ ++L PGG + ALR FEDD G VH TF+VGD L + PKTE A+KK K +K G L K K + T + L+GL KGG+Q+L EMGLW +GE + +C + C+A+ AA+RQAI AFNRGGE R++V++
Sbjct: 360 MTVGQHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGKFKKDDEVKATGPTAVLIGLPKGGKQLLMEMGLW--EGEPTLRVHEC-SACRAEKAATRQAITAFNRGGEGRQQVVD 568
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Match: A0A6H5JRU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU6_9PHAE) HSP 1 Score: 160 bits (405), Expect = 3.150e-43 Identity = 98/215 (45.58%), Postives = 126/215 (58.60%), Query Frame = 1
Query: 1 MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKILLPKT---------EAQKK---MKGRKFGTGLDKKKYPVGTRVTSG-SPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNRGGEQRERVLEQARREQQ 606
MTVG+ D YWT+DRMC Q+P IA+ EL++ PHR V +FDNSTGH AY++ AL+A I PGG + L F DD G VH TF+ GDT+L D + KT EA KK K KFG+ L K R T S L+G KGG+Q+L EMGLW + G+ +++C CK + A + AI AFNRGGE R++ + A RE Q
Sbjct: 264 MTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILD-FLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKFGSSLGDFKAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLEC-KACKEERKAIKAAITAFNRGGEARQQAFDDAAREDQ 476
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 157 bits (398), Expect = 6.670e-41 Identity = 91/211 (43.13%), Postives = 125/211 (59.24%), Query Frame = 1
Query: 1 MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKILLPKTEAQKKM---------KGRKFGTGLDKKKYPVGTRVTSG---SPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNRGGEQRERVLEQARR 597
MTVG+ D +W ++RMC Q+P IA+ EL++ PHR V +FDNSTGH AY+ AL+A I+ PGG +A L F DD G V TF+ GD LL ++ KT Q K K +K G + ++ GT + + S L+G KGG+QML EMGLW + GE +++C CK + AA+R AI +FNRGGE R++ L+ A R
Sbjct: 934 MTVGQNQDGFWNNERMCKQIPGLIAIHELTSEPHRPLVMVFDNSTGHAAYETSALVASHINKGPGGGQAILDDFLDDEGNLVRTTFRAGDKLLFKAQVYAAKTPEQLKAEEEELKRNPKYKKPRNGDNLGEFAAGTEIRASGRTSRLIGQAKGGQQMLMEMGLWDVPGEDPVRVLEC-KACKGERAATRAAITSFNRGGEGRQQALDDAAR 1143 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.50.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig14.50.1 >prot_P-littoralis_Contig14.50.1 ID=prot_P-littoralis_Contig14.50.1|Name=mRNA_P-littoralis_Contig14.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=206bp MTVGKQHDRYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYback to top mRNA from alignment at P-littoralis_Contig14:224801..225418- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig14.50.1 ID=mRNA_P-littoralis_Contig14.50.1|Name=mRNA_P-littoralis_Contig14.50.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=618bp|location=Sequence derived from alignment at P-littoralis_Contig14:224801..225418- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig14:224801..225418- >mRNA_P-littoralis_Contig14.50.1 ID=mRNA_P-littoralis_Contig14.50.1|Name=mRNA_P-littoralis_Contig14.50.1|organism=Pylaiella littoralis U1_48|type=CDS|length=618bp|location=Sequence derived from alignment at P-littoralis_Contig14:224801..225418- (Pylaiella littoralis U1_48)back to top |