mRNA_P-littoralis_Contig14.26.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Match: D7G070_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G070_ECTSI) HSP 1 Score: 234 bits (597), Expect = 8.070e-72 Identity = 163/227 (71.81%), Postives = 175/227 (77.09%), Query Frame = 1
Query: 1 MALSSSTARYGMVRALARSTTKLSSTPSTAPRRSLSSFRLPPATHQHQLRRQVTLPTTRGLWSVAVSPRQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXFKPKRKAVPDDTDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGKKKRGERTERVSFSSVNVLDYPPLREGIKAFSDWPTIPQLYVKGEFVGGCDILTQLHTSGDLETMLKEAKLRN 681
MA S S AR G++RALARS KL S P RSL+S ++P Q QLRR+ TL + WSV P+Q XXXXXXXXXXXXXXXXXXX FKPKRKAVP+ DEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQG VSFSSVNVLDYPPLREGIK FS+WPTIPQLYVKGEFVGGCDILTQLH SGDLETMLKEAKL++
Sbjct: 1 MAASYSAARQGLLRALARSP-KLGSPLPATPIRSLTSVQVPALQQQLQLRRE-TLSKSSQAWSV--EPQQXXXXXXXXXXXXXXXXXXXXXD-------FKPKRKAVPEGADEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQG----------VSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAKLKD 206
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Match: A0A835Z0J8_9STRA (Monothiol glutaredoxin-5, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J8_9STRA) HSP 1 Score: 169 bits (427), Expect = 8.870e-47 Identity = 80/126 (63.49%), Postives = 97/126 (76.98%), Query Frame = 1
Query: 298 FKPKRKAVPDDTDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGKKKRGERTERVSFSSVNVLDYPPLREGIKAFSDWPTIPQLYVKGEFVGGCDILTQLHTSGDLETMLKEAKL 675
FKPKRK VP+ E+ D+I +QV N +M+YMKGTP+ P CGFS QVV ILH+QG V FSS+N+LDYP +REG+K FSDWPTIPQ+Y+ GEFVGGCDI+TQ+H SG+LETMLKEA L
Sbjct: 68 FKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQG----------VDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAGL 183
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Match: A0A6G0XHZ8_9STRA (Glutaredoxin domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHZ8_9STRA) HSP 1 Score: 158 bits (399), Expect = 3.620e-43 Identity = 77/124 (62.10%), Postives = 93/124 (75.00%), Query Frame = 1
Query: 298 FKPKRKAVPD-DTDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGKKKRGERTERVSFSSVNVLDYPPLREGIKAFSDWPTIPQLYVKGEFVGGCDILTQLHTSGDLETMLKE 666
FKPK A P D D+V LIK VE+ P+MLYMKGTP+ PQCGFS+QVV ILH+QG VSF SVNVLD+P +REG+K FS WPTIPQL+VKGEF+GGCDI+T +H SG+LE + K+
Sbjct: 32 FKPKYHAAPSSDKDDVLKLIKSHVETYPIMLYMKGTPSSPQCGFSRQVVQILHAQG----------VSFDSVNVLDHPEIREGVKEFSQWPTIPQLFVKGEFIGGCDIVTDMHKSGELEDLFKQ 145
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Match: A0A485KR85_9STRA (Aste57867_10735 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR85_9STRA) HSP 1 Score: 153 bits (386), Expect = 3.020e-41 Identity = 76/123 (61.79%), Postives = 91/123 (73.98%), Query Frame = 1
Query: 298 FKPKRKAVPD-DTDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGKKKRGERTERVSFSSVNVLDYPPLREGIKAFSDWPTIPQLYVKGEFVGGCDILTQLHTSGDLETMLK 663
FKPK A P D DE+ LI+ V++ PVMLYMKGTP+ PQCGFS+QVV ILH+QG VSF SVNVLD+ +REG+K FS WPTIPQL+VKGEFVGGCDI+T +H SG+LE + K
Sbjct: 32 FKPKYHAAPSSDKDEILKLIQSHVDTYPVMLYMKGTPSSPQCGFSRQVVQILHAQG----------VSFDSVNVLDHEEIREGVKEFSQWPTIPQLFVKGEFVGGCDIVTDMHKSGELEELFK 144
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Match: A0A7S2HJB1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HJB1_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.280e-40 Identity = 73/125 (58.40%), Postives = 92/125 (73.60%), Query Frame = 1
Query: 298 FKPKRKAVPDDTDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGKKKRGERTERVSFSSVNVLDYPPLREGIKAFSDWPTIPQLYVKGEFVGGCDILTQLHTSGDLETMLKEAK 672
F PKRKA+ DD DE +IK+ VESN +MLYMKG P+ P CGFS +VV L ++G V FSSVNVLDYP +REG+K FS+WPTIPQLY+ GEF+GGCDI+T +H SG+L+ +L+E K
Sbjct: 39 FAPKRKAI-DDEDEALKMIKEHVESNRIMLYMKGNPSMPMCGFSARVVQALQNEG----------VDFSSVNVLDYPQIREGVKKFSEWPTIPQLYIDGEFIGGCDIVTSMHESGELKEILEEKK 152
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Match: A0A7R9UER6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UER6_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.940e-40 Identity = 77/124 (62.10%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 298 FKPKRKAVPDDTDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGKKKRGERTERVSFSSVNVLDYPPLREGIKAFSDWPTIPQLYVKGEFVGGCDILTQLHTSGDLETMLKEA 669
F P+RK V D+ +E+ LIKKQ N VMLYMKGTP QPQCGFS QV I+ QG V F+SVNVLDYP LRE IK +S WPTIPQLYV GEF+GGCDI+TQ+H SG+LE + KEA
Sbjct: 72 FAPQRKVVADNVEEMMALIKKQTTENKVMLYMKGTPNQPQCGFSAQVSKIMAVQG----------VDFASVNVLDYPLLRECIKEYSSWPTIPQLYVNGEFIGGCDIVTQMHQSGELEELFKEA 185
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Match: A0A397B097_9STRA (Glutaredoxin domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A397B097_9STRA) HSP 1 Score: 150 bits (378), Expect = 4.220e-40 Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 298 FKPKRKAVPD-DTDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGKKKRGERTERVSFSSVNVLDYPPLREGIKAFSDWPTIPQLYVKGEFVGGCDILTQLHTSGDLETMLK 663
FKPK A P D D+V LI+ V + PVMLYMKGTP+ PQCGFS+QVV ILH+QG VSF SVNVLD+ +R+G+K FS WPTIPQL+VKGEF+GGCDI+T +H SG+LE + K
Sbjct: 31 FKPKYHAAPSSDKDDVLKLIENHVNTYPVMLYMKGTPSSPQCGFSRQVVQILHAQG----------VSFDSVNVLDHEEIRDGVKEFSQWPTIPQLFVKGEFIGGCDIVTDMHKSGELEELFK 143
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Match: A0A418EYG3_9STRA (Glutaredoxin domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EYG3_9STRA) HSP 1 Score: 150 bits (378), Expect = 4.220e-40 Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 298 FKPKRKAVPD-DTDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGKKKRGERTERVSFSSVNVLDYPPLREGIKAFSDWPTIPQLYVKGEFVGGCDILTQLHTSGDLETMLK 663
FKPK A P D D+V LI+ V + PVMLYMKGTP+ PQCGFS+QVV ILH+QG VSF SVNVLD+ +R+G+K FS WPTIPQL+VKGEF+GGCDI+T +H SG+LE + K
Sbjct: 31 FKPKYHAAPSSDKDDVLKLIENHVNTYPVMLYMKGTPSSPQCGFSRQVVQILHAQG----------VSFDSVNVLDHEEIRDGVKEFSQWPTIPQLFVKGEFIGGCDIVTDMHKSGELEELFK 143
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Match: A0A1V9ZY72_9STRA (Monothiol glutaredoxin-5, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY72_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.920e-40 Identity = 73/123 (59.35%), Postives = 91/123 (73.98%), Query Frame = 1
Query: 298 FKPKRKAVPD-DTDEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGKKKRGERTERVSFSSVNVLDYPPLREGIKAFSDWPTIPQLYVKGEFVGGCDILTQLHTSGDLETMLK 663
FKPK A + D+V LI+ V++ P+MLYMKGTP QPQCGFS+QVV ILH+QG +SF SVNVLD+P +REG+K FS WPTIPQL+V GEFVGGCDI++ +H SG+LE +LK
Sbjct: 26 FKPKYHAAASAERDDVIKLIQSHVDTYPIMLYMKGTPTQPQCGFSRQVVQILHAQG----------ISFDSVNVLDHPEIREGVKEFSQWPTIPQLFVNGEFVGGCDIVSDMHKSGELEELLK 138
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Match: A0A7S2WSS4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSS4_9STRA) HSP 1 Score: 150 bits (379), Expect = 5.910e-40 Identity = 77/128 (60.16%), Postives = 97/128 (75.78%), Query Frame = 1
Query: 298 FKPKRKAVPDDTDE--VSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGKKKRGERTERVSFSSVNVLDYPPLREGIKAFSDWPTIPQLYVKGEFVGGCDILTQLHTSGDLETMLKEAKL 675
FKP+R+A PD +DE V +LIK+ VE +P++LYMKGTP+ PQCGFS+QVV ILH+ G V FSS+NVL++P +REGIK +SDWPTIPQLYV GEFVGGCDI+T+ SGDL+ M K+ L
Sbjct: 50 FKPQRQA-PDLSDEKAVLELIKQHVEEHPILLYMKGTPSAPQCGFSQQVVRILHATG----------VDFSSINVLEHPEIREGIKLYSDWPTIPQLYVGGEFVGGCDIVTEQFKSGDLQEMFKQQNL 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig14.26.1 >prot_P-littoralis_Contig14.26.1 ID=prot_P-littoralis_Contig14.26.1|Name=mRNA_P-littoralis_Contig14.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=228bp MALSSSTARYGMVRALARSTTKLSSTPSTAPRRSLSSFRLPPATHQHQLRback to top mRNA from alignment at P-littoralis_Contig14:95983..99991+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig14.26.1 ID=mRNA_P-littoralis_Contig14.26.1|Name=mRNA_P-littoralis_Contig14.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4009bp|location=Sequence derived from alignment at P-littoralis_Contig14:95983..99991+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig14:95983..99991+ >mRNA_P-littoralis_Contig14.26.1 ID=mRNA_P-littoralis_Contig14.26.1|Name=mRNA_P-littoralis_Contig14.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=684bp|location=Sequence derived from alignment at P-littoralis_Contig14:95983..99991+ (Pylaiella littoralis U1_48)back to top |