mRNA_P-littoralis_Contig14.240.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 236 bits (603), Expect = 6.680e-73 Identity = 110/193 (56.99%), Postives = 144/193 (74.61%), Query Frame = 2
Query: 2 MSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQEQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRAL--LAEDVECFFGILK 574
+S T +FH+F + FARE Y H+ LPT G+ Q++VM YD LGF+GA GSTDVTHI W CP++ + YTGKEG+ T+A+Q VDHT R+LA T GF GS NDK+IIRYD AVTKIR+DPIY+EK +T+++ DGTP+Q KG Y +VDNGY+KW LIPP+K+P + +S+ L + +DVECFFGI+K
Sbjct: 181 ISMQTAAATFHRFTRYFAREMYAEHIFLPT-GDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVK 372
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 229 bits (584), Expect = 6.480e-71 Identity = 108/193 (55.96%), Postives = 143/193 (74.09%), Query Frame = 2
Query: 2 MSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQEQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRALLA--EDVECFFGILK 574
+S T+ ++FH+F K FA E Y +V+LPT GED +VM+ YD +GF GA+GSTDVTHI W CP++ ++YTGKEG T+AFQ VDH+GR+LA T+GF G+ NDKTIIRYD AVT+IR DP+YTE+ Y L+ +DG F+ KG Y +VDNGY+KW LIPP+K P + +S+ L + +DVEC+FGILK
Sbjct: 106 ISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILK 297
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 229 bits (584), Expect = 6.660e-70 Identity = 108/193 (55.96%), Postives = 143/193 (74.09%), Query Frame = 2
Query: 2 MSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQEQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRALLA--EDVECFFGILK 574
+S T+ ++FH+F K FA E Y +V+LPT GED +VM+ YD +GF GA+GSTDVTHI W CP++ ++YTGKEG T+AFQ VDH+GR+LA T+GF G+ NDKTIIRYD AVT+IR DP+YTE+ Y L+ +DG F+ KG Y +VDNGY+KW LIPP+K P + +S+ L + +DVEC+FGILK
Sbjct: 197 ISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILK 388
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 211 bits (536), Expect = 6.830e-64 Identity = 100/194 (51.55%), Postives = 135/194 (69.59%), Query Frame = 2
Query: 2 MSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQ-EQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRAL--LAEDVECFFGILK 574
MS T+Q FHKF K FARE Y H++LP+ + + VMK YD LGF+GA+GS DVTHI W+ CP++ + YTGKEG T+ +Q V+H GR +A T+GF S NDKT + +DA V KIR D YTEK + ++++DGT KG Y +VDNGY+KW IL+ PTK+P ++ + +S+ L + +DVECFFGILK
Sbjct: 121 MSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILK 314
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Match: A0A6H5J792_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J792_9PHAE) HSP 1 Score: 201 bits (510), Expect = 1.970e-63 Identity = 94/125 (75.20%), Postives = 106/125 (84.80%), Query Frame = 2
Query: 116 MKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPT 490
M+ YD LGFTGAIGSTDVTHI+WA CP+SW + YTGKEG +IA+QAIVDHTGR+LA TKGF G+MNDKTII YD AV KIR+DP+YTEKVYTL DK+G PF+RKGNYSIVDNGYNK PPT
Sbjct: 1 MEVYDLLGFTGAIGSTDVTHIRWAFCPYSWARQYTGKEGLPSIAYQAIVDHTGRILAVTKGFAGAMNDKTIIWYDTAVAKIRRDPVYTEKVYTLSDKNGQPFERKGNYSIVDNGYNK--ATPPPT 123
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Match: A0A6H5KVT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVT5_9PHAE) HSP 1 Score: 196 bits (499), Expect = 1.280e-61 Identity = 89/118 (75.42%), Postives = 104/118 (88.14%), Query Frame = 2
Query: 116 MKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKW 469
M+ YD LGFTGAIGSTDVTHI+WA CP+SW + YTGKEGF +IA+QAIV+ TG +LA TKGF G+MNDKTIIRYD AV KIR+DP+YTEKVYTLFDK+G PF+R+GN SIVDNGYNK+
Sbjct: 1 MEAYDLLGFTGAIGSTDVTHIRWACCPYSWARQYTGKEGFPSIAYQAIVNDTGLVLAVTKGFAGAMNDKTIIRYDTAVAKIRRDPVYTEKVYTLFDKNGQPFEREGNNSIVDNGYNKF 118
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 206 bits (523), Expect = 2.030e-61 Identity = 106/222 (47.75%), Postives = 137/222 (61.71%), Query Frame = 2
Query: 2 MSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQ-EQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIIRYDAAVTKIRKDPIYT----------------------------EKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRAL--LAEDVECFFGILK 574
MS T+Q FHKF + FARE Y +HLPT + + VMK YD LGFTGA+GS DVTHI W+ CP++ + YTGKEGF TIA+Q VDH GR +A T+GF GS NDKTI+ +D AV KI D YT EK + ++++DGT KG Y +VDNGY+KW ILI P+K+P ++ + +S+ L + +DVECFFGILK
Sbjct: 108 MSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILK 329
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 197 bits (500), Expect = 1.150e-59 Identity = 93/173 (53.76%), Postives = 124/173 (71.68%), Query Frame = 2
Query: 65 YHSHVHLPTAGEDQ-EQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRAL--LAEDVECFFGILK 574
Y H+HLPT + + V++ YD LGFTGA+GS DVTHI W+ CP++ + YTGKEGF TI +Q VDH GR +A T+GF GS NDKT + +DAAV KIR D YTEK + ++++DGT KG Y +VDNGY+KW ILI P+K+P ++ + +S+ L + +DVECFFGILK
Sbjct: 2 YDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILK 174
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.330e-59 Identity = 100/194 (51.55%), Postives = 133/194 (68.56%), Query Frame = 2
Query: 2 MSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQ-EQVMKHYDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYNKWAILIPPTKWPTTDMETRWSRAL--LAEDVECFFGILK 574
MS T+Q FH+F + FA E Y H+ LP+ + ++VM Y+ LGF GA+GSTDVTHI W+ CP++ + YTGKEG T+ +Q V+H GR+LA T+GF GS NDKTII D AV +IR D Y EK +T+ KDGT KG Y IVDNGY+KW +LI P+K+P ++ + +S+ L + +DVECFFGILK
Sbjct: 150 MSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILK 343
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Match: A0A6H5KQK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK3_9PHAE) HSP 1 Score: 187 bits (476), Expect = 3.770e-58 Identity = 84/113 (74.34%), Postives = 97/113 (85.84%), Query Frame = 2
Query: 125 YDHLGFTGAIGSTDVTHIKWAACPHSWEKLYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIIRYDAAVTKIRKDPIYTEKVYTLFDKDGTPFQRKGNYSIVDNGYN 463
YD L F GAI STDVTHI+WA CP+SW + Y GKEGF +IA+QAIVDHTG +LA TKGF G MNDKTIIRYD AV KIR+DP+YT+KVYTLFDK+G PF+RKGNYSIVDNG++
Sbjct: 5 YDLLEFAGAIRSTDVTHIRWACCPYSWARQYMGKEGFPSIAYQAIVDHTGHVLAVTKGFAGVMNDKTIIRYDTAVAKIRRDPVYTKKVYTLFDKNGQPFERKGNYSIVDNGFS 117 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.240.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig14.240.3 >prot_P-littoralis_Contig14.240.3 ID=prot_P-littoralis_Contig14.240.3|Name=mRNA_P-littoralis_Contig14.240.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=191bp MSESTIQNSFHKFNKLFAREFYHSHVHLPTAGEDQEQVMKHYDHLGFTGAback to top mRNA from alignment at P-littoralis_Contig14:959142..960912- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig14.240.3 ID=mRNA_P-littoralis_Contig14.240.3|Name=mRNA_P-littoralis_Contig14.240.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=1771bp|location=Sequence derived from alignment at P-littoralis_Contig14:959142..960912- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig14:959142..960912- >mRNA_P-littoralis_Contig14.240.3 ID=mRNA_P-littoralis_Contig14.240.3|Name=mRNA_P-littoralis_Contig14.240.3|organism=Pylaiella littoralis U1_48|type=CDS|length=573bp|location=Sequence derived from alignment at P-littoralis_Contig14:959142..960912- (Pylaiella littoralis U1_48)back to top |