mRNA_P-littoralis_Contig14.215.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig14.215.1
Unique NamemRNA_P-littoralis_Contig14.215.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 509 bits (1310), Expect = 1.860e-170
Identity = 273/356 (76.69%), Postives = 300/356 (84.27%), Query Frame = 2
Query:    2 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIGHFEQGFDTVTPAPAPAANTDTTEPARKKKKPTSRL 1069
            LTLEY  DL+G SV+  DVFL FTVDQGKN+VNACT LGVPVVECNCHRVNSAVLWALGIAGS TTCKNK M    KKLAALVGVFSHSAVNNDMLKE+QRLEADLHR+YE IRRNDTRWTSQ +MM RLLILKK I+EYFRRLAQQN Q+KQLKRKLTAHEWTVTNEVCSLL+TVSE TIRMQGA DTH+SQATFI++EV+DML  D HPIRVE+A+VTPPP A G+IPTE E Q +++SL  +ST +TQVTDLT EAQDVVQV+LEV++EKGVGKALQ VER+SVLLDPRRK  D   + NGS  L+ QAEADLKAFIG F Q     TPAPAP  N DT EPARKK   TSRL
Sbjct:  152 LTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQ-NESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFIGKFAQESAPSTPAPAPVVNVDTAEPARKKXXXTSRL 502          
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 1.060e-150
Identity = 252/357 (70.59%), Postives = 277/357 (77.59%), Query Frame = 2
Query:    2 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIGHFEQGFDTVTPAPAPAANTDTTEPARKKKKPTSRLE 1072
            LTLEYF DL+G SV+  DVFL FTVDQGKN+VNACT LGVPVVECNCHRVNSAVLWALGIAGSATTCKNK M    KKLAALVGVFSHSAVNNDMLKE+QRLEADLHR+YE IRRNDTRWTSQ +MM RLLILKK I+EYFRRLAQQN Q+KQLKRKLTAHEWTVTNEVCSLL+TVSE TIRMQGA +TH+SQATFI++E                                  E Q+++SL  +STE+TQVT LT EAQDVVQV+ E+++EKGVGKALQRVER+SVLLDPRRK  D   + NGS  L+ QAEADLKAF G F Q     TPAPAP  N DT EPARKKK PTSRLE
Sbjct:  152 LTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPM----KKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINEG---------------------------------EGQNESSLDGISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFTGKFAQESAPSTPAPAPVVNVDTAEPARKKKXPTSRLE 471          
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 451 bits (1160), Expect = 1.790e-149
Identity = 252/358 (70.39%), Postives = 281/358 (78.49%), Query Frame = 2
Query:    2 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIGHFEQGFDTVTPAPAPAANTDTTEPARKKKKPTSRLEE 1075
            LT EYF   +G SV+P DVFL FTVDQG N+VNACT LGV VV+CNCHR+NSAV+WALGIAGSATTC+N  MG LMKKLAALVGVFS SAVNN MLKE+QRLE DLHR+YEL+RRNDT   SQF+MM RLL LKK I+EYFRRL Q  P +KQLKRKL++HEW VTNEVCSLL  VSE TIR+QGA DTHISQA F++HEVM+MLKD++HPIR  NA+VTPPP A  +IPTEEEE Q Q     VSTED  V DLT EAQ V +V+LEV+EEKGVGKALQRVER+S LLDPRRK  DA QVGNG E LR  AEADLK FI  F       TPAPAP  +    EPA KKKK  SR+EE
Sbjct:    7 LTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNN-MLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQ-IPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQ--KGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFIATFTAESVPPTPAPAPVVDVQPAEPALKKKK-FSRIEE 356          
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 440 bits (1132), Expect = 4.590e-145
Identity = 227/251 (90.44%), Postives = 232/251 (92.43%), Query Frame = 2
Query:    2 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQ 754
            LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNA T LGVPVVECNCHRVNSAVLWALGIAG A TCKNKLMGDLMKKLAA VGVFSHSAVNNDMLKEIQRLEADLHRVYE        WTSQFRMM RLLIL KAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVM+MLK+DSHPIRVENA+VTPPPQAPGLI  EEEEQQHQ SL ++STEDTQ
Sbjct:  149 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRLEADLHRVYE--------WTSQFRMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMEMLKEDSHPIRVENAMVTPPPQAPGLILAEEEEQQHQASLVDISTEDTQ 391          
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 405 bits (1040), Expect = 1.140e-127
Identity = 228/365 (62.47%), Postives = 264/365 (72.33%), Query Frame = 2
Query:    2 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIGHFEQGFDTVTPAPAPAANTDTTEPARKKKKPTSRLEERRAARMA 1096
            LT EYF D +G  V+P DVFL FTVDQG N+VNAC  LGVPVV+CNCHRVN+AVLWALGIAG+    +NK+MGDLMKKLAALVGVFSHSAVNND LKE+QRLE DLH VY+LIRRNDTRWTSQF+MM RLL LKK I EYFR    + P +    RKLT  EWT+TNEVCSLL  VSE TIRMQGA DTHISQA FI+HEVM+ML++DSHPIR +NA             TE EE Q              V +L+  AQ V++V+L+V+EEK VGKA+Q+VER+S L+DPRRK  D  ++ NGS  LR +AE DLKA I  F+       PAPAP  N D  EPA K+KK  SRLEERRAAR+A
Sbjct:  341 LTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR--RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFR----EQPHNS---RKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNA-------------TEPEEMQ--------------VLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNVDPVEPASKRKK-LSRLEERRAARVA 668          
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 396 bits (1018), Expect = 1.500e-126
Identity = 223/365 (61.10%), Postives = 260/365 (71.23%), Query Frame = 2
Query:    2 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIGHFEQGFDTVTPAPAPAANTDTTEPARKKKKPTSRLEERRAARMA 1096
            LTLEYF   +G SVQP DVFL FTVDQGKNI+NACT LGV VVECNCHR+N+AV+WALGIAG      N  MG LMKKLAA+VGVFSHSAVNND LKE+QRLE    R+YEL+R NDTRWTSQF+MM R+L LKK I+EYF++  Q         RKLT +EWT+TNEVCSLL  VSE TIRMQG+ DTH+ QA FI+HE+++ML +D+HPIR  NA V P P  P  IPT+                DTQV DLT EAQ V++V+ E + EKGVG A   VER+S L+DPR +  D+DQ+ NGS  LR +AE DLKA I  F+ G  T  PAPAP  N D  EPA KKKK  SRLEERRAAR+A
Sbjct:  148 LTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNE-------RKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLP--PEGIPTD----------------DTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPATAAPAPAPVMNLDRVEPAPKKKK-LSRLEERRAARVA 484          
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 402 bits (1032), Expect = 2.360e-126
Identity = 225/365 (61.64%), Postives = 262/365 (71.78%), Query Frame = 2
Query:    2 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIGHFEQGFDTVTPAPAPAANTDTTEPARKKKKPTSRLEERRAARMA 1096
            LTLEYF   +G SVQP DVFL FTVDQGKNI+NACT LGV VVECNCHR+N+AV+WALGIAG      N  MG LMKKLAA+VGVFSHSAVNND LKE+QRLE    R+YEL+RRNDTRWTSQF+MM R+L LKK I+EYF++  Q         RKLT +EWT+TNEVCSLL  VSE TIRMQG+ DTH+ QA FI+HE+++ML +D+HPIR  NA V P P  P  IPT+                DTQV DLT EAQ V++V+ E + EKG+G A   VER+S L+DPRRK  D+DQ+ NGS  LR +AE DLKA I  F+ G  T  PAPAP  N D  EPA KKKK  SRLEERRAAR+A
Sbjct:  343 LTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNE-------RKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLP--PEGIPTD----------------DTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPATAAPAPAPVMNLDPVEPAPKKKK-LSRLEERRAARVA 679          
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 9.770e-103
Identity = 200/380 (52.63%), Postives = 245/380 (64.47%), Query Frame = 2
Query:   29 IGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRW-TSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIGHFEQGFDTV-TPAPAPAANTDTTEPARK--KKKPTSRLEERRAA--RMAGRPAAPAVGPILRLAVRV 1150
            +G SV P + FL FTVDQGKNI+NACT L V VVECNCHRVN+AV+WALGIA      KN  MG LMKKLAA+VGVFSHSAVNND LKE+QRLE    R+YEL+RRNDTRW TSQ +MM R L LKK I+E+F++  Q +       RKLT +EWT+ NEVCSLL  VSE TIR+QG+ DTHI QA FI+HEV++ML +D+HPIR  NA V P P+                    + T+DT VTDLT EA  V++V+L+V+ +KGVG A    ER+S L+DPRRK   +DQ+ NGS  L  +AE DLKA I  F+ G  T  T AP          PA    K+K  SRLE   ++     G+  +PA  P L    R+
Sbjct:    1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQND-------RKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIRQPNATVVPVPEEG------------------IPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRKLLGSDQLENGSADLSKKAEDDLKAVIAKFDVGPSTESTAAPXXXXXXXXXXPAEPAPKRKTVSRLERGTSSVSPTTGKVTSPAEMPYLAFIARL 353          
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 1.720e-87
Identity = 184/391 (47.06%), Postives = 231/391 (59.08%), Query Frame = 2
Query:    2 LTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNACTGLGVPVVECNCHRVNSAVLWALGIAGSATTCKNKLMGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIGHFEQG----FDTVTPAPAPAANTDTTEPARKKKKPTSRLEERRAARMAGRPAAPA--VGPILRLAVRVGA 1156
            LT E+F D++G +VQP DVFL FTVDQG N+VNAC  L V V++CN HR+NS  +WALGI GS  T +N  M  LMK+LAA+VGVFSHSAVNND LK+IQRL+ +   +YELIRRNDTRW SQ  MM RLL LKKAI EYFR     N       RKL++ EWTVTNEVCSLLD V+E T+++QGA DTHISQ  F + E+ ++   D + IRV +             P  ++          V  E  QV DL  E   V +V+L  +E+K +G A   +ER+  LLDPRRK C  + + NGS  L+A A AD+K+    F +       +              +PA KK+K  S LEERR  R+A   AA A    P      R GA
Sbjct:    3 LTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNN-------RKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQ------------PYNDDS---------VLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTFAEADLGSASSXXXXXXXXXXXXXNQPAPKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVSTARRGA 365          
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Match: A0A6H5KZZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ1_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 1.380e-86
Identity = 164/283 (57.95%), Postives = 194/283 (68.55%), Query Frame = 2
Query:  215 MGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWTSQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTPPPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLEEKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIGHFEQG---FDTVTPAPAPAANTDTTEPARKKKK 1054
            MG LMKKLAA+VGVF+HSAVNND LKE+QRLE    R+YEL+RRNDTRWTSQF+MM R L LKK I+EYF++  Q         RKLT +EWT+ NEVCSLL  VSE TIRMQG+ DTHI QA FI+HE+++ML +D+HPIR  NA V P P  P  IPT+                 TQVTDLT EAQ V++V+L+V+ EKGVG A   VE +S L+DP  K  D+DQ+ NGS  LR +AE DLKA I  F+ G     TV PAPAP  NTD  EPA KKKK
Sbjct:    1 MGTLMKKLAAMVGVFNHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRCLALKKPISEYFKKYLQNE-------RKLTPNEWTMINEVCSLLSNVSEVTIRMQGSVDTHIGQAMFIIHELIEMLGEDTHPIRQPNATVVPVP--PEGIPTD----------------GTQVTDLTAEAQCVLEVLLDVMREKGVGSAQVAVESLSALMDPSGKLLDSDQLENGSADLRNKAEDDLKAVIAKFDVGPSTESTVAPAPAPVVNTDPAEPAPKKKK 258          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JZU3_9PHAE1.860e-17076.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQI6_9PHAE1.060e-15070.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDJ6_9PHAE1.790e-14970.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXV5_9PHAE4.590e-14590.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRT6_9PHAE1.140e-12762.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTB8_9PHAE1.500e-12661.10Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JGG8_9PHAE2.360e-12661.64Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5KAS2_9PHAE9.770e-10352.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAN7_9PHAE1.720e-8747.06Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KZZ1_9PHAE1.380e-8657.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:862270..864562 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1864
Hectar predicted targeting categoryother localisation
Exons2
Cds size948
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789652.429661-UTR-P-littoralis_Contig14:862269..8624831680789652.429661-UTR-P-littoralis_Contig14:862269..862483Pylaiella littoralis U1_48UTRP-littoralis_Contig14 862270..862483 +
1680789652.4947262-UTR-P-littoralis_Contig14:863860..8645621680789652.4947262-UTR-P-littoralis_Contig14:863860..864562Pylaiella littoralis U1_48UTRP-littoralis_Contig14 863861..864562 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789652.4404075-CDS-P-littoralis_Contig14:862483..8626261680789652.4404075-CDS-P-littoralis_Contig14:862483..862626Pylaiella littoralis U1_48CDSP-littoralis_Contig14 862484..862626 +
1680789652.485875-CDS-P-littoralis_Contig14:863055..8638601680789652.485875-CDS-P-littoralis_Contig14:863055..863860Pylaiella littoralis U1_48CDSP-littoralis_Contig14 863056..863860 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.215.1prot_P-littoralis_Contig14.215.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig14 862484..863860 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig14.215.1

>prot_P-littoralis_Contig14.215.1 ID=prot_P-littoralis_Contig14.215.1|Name=mRNA_P-littoralis_Contig14.215.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=316bp
MGDLMKKLAALVGVFSHSAVNNDMLKEIQRLEADLHRVYELIRRNDTRWT
SQFRMMARLLILKKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCS
LLDTVSEATIRMQGAADTHISQATFIVHEVMDMLKDDSHPIRVENAVVTP
PPQAPGLIPTEEEEQQHQTSLAEVSTEDTQVTDLTQEAQDVVQVMLEVLE
EKGVGKALQRVERMSVLLDPRRKGCDADQVGNGSEALRAQAEADLKAFIG
HFEQGFDTVTPAPAPAANTDTTEPARKKKKPTSRLEERRAARMAGRPAAP
AVGPILRLAVRVGAS*
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mRNA from alignment at P-littoralis_Contig14:862270..864562+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig14.215.1 ID=mRNA_P-littoralis_Contig14.215.1|Name=mRNA_P-littoralis_Contig14.215.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2293bp|location=Sequence derived from alignment at P-littoralis_Contig14:862270..864562+ (Pylaiella littoralis U1_48)
GCTCACGCTGGAGTACTTCAAGGACTTGATCGGGCCGTCGGTCCAGCCCC ACGACGTCTTCCTCGGGTTCACGGTGGATCAAGGAAAGAACATCGTGAAC GCGTGTACGGGGTTGGGAGTTCCAGTCGTCGAGTGCAACTGTCACCGCGT CAATTCCGCCGTCCTGTGGGCCCTGGGTATTGCGGGTAGTGCGACGACTT GCAAGAACAAGCTGATGGGAGACCTGATGAAGAAGCTGGCAGCGTTGGTC GGCGTCTTCAGCCACTCCGCTGTCAACAACGACATGCTGAAGGAAATCCA GCGGCTGGAGGCGGATCTTCATCGCGTCTACGAGCTCATCCGGCGAAACG ACACCAGGTGTGTTGATGGGGAGGATTTCTTATTTCTTAGGTTTGTTTTT CGTTGTTCAGCACTGAATCCTTTTTTTTTTATATTGTCTGCCCAAAACCA AAAAATTAAAAACCCCCAACCAACAATAATTAAAATAACACTATTGTCTG CCCAAAACCAAAAAATTAAAAACCCCCAACCAACAATAATTAAAATAACA CTGGCGAGTTTTTTTTTCTCCGGTCTTCAGGAAATCCTTTTGTACTGGTA CTGTTTTTTTTTTTTTTTTTTACGGCCAGGTTTTCTGGCAACGTTGAATG AGTGCGTGCAATCAATTCTCAATTTCGTTGTTGAGTACAACTTGAACGTT TTTGTCTCAGGACAACCAAAATGCAAACGAAAAACACCAACACCAACGCG GACTCCTTCCCCCCACCCCACTCCCCCTCCCAACAGGTGGACTAGCCAGT TCAGGATGATGGCTCGCCTTCTGATCTTGAAGAAGGCGATCAACGAGTAC TTCCGCCGACTTGCCCAGCAGAACCCCCAGCACAAGCAGCTGAAACGCAA GTTGACTGCCCACGAGTGGACCGTCACCAACGAGGTGTGCAGCCTCCTGG ACACCGTCTCCGAGGCCACGATCCGCATGCAAGGCGCCGCCGACACCCAC ATCAGCCAGGCGACGTTCATCGTTCACGAGGTGATGGACATGTTGAAGGA CGACTCTCACCCAATCCGTGTGGAGAACGCCGTGGTCACGCCGCCCCCAC AGGCACCGGGCCTCATCCCCACCGAGGAGGAGGAGCAGCAGCACCAGACC TCTCTGGCCGAGGTCTCCACGGAGGACACCCAGGTGACTGACCTCACCCA AGAAGCGCAGGACGTGGTCCAAGTCATGCTGGAGGTGTTGGAAGAGAAGG GAGTGGGGAAGGCGCTGCAGAGGGTGGAGCGAATGTCCGTGCTGCTGGAC CCGAGGCGGAAAGGTTGCGACGCCGACCAAGTCGGGAACGGCTCTGAAGC CCTGAGGGCACAAGCCGAAGCGGACTTGAAGGCATTCATCGGCCACTTCG AGCAGGGGTTCGACACGGTCACGCCGGCGCCGGCACCAGCGGCCAACACC GACACCACGGAACCTGCTCGCAAGAAGAAGAAGCCTACTTCAAGATTGGA GGAGCGGCGCGCTGCACGTATGGCGGGGCGGCCGGCGGCGCCAGCGGTGG GGCCAATCCTCAGGCTGGCGGTACGGGTCGGCGCGTCATGATCGAGCGAG AGATGTTGGTGTACTTGGCGGAGCAACCGCAGCTCGACGTCGATGGCTTC AACCTTATTGGATTTTGGAACCGGCGAGGCACTGACAGCGTGTGCGCGGC GACTGGGCAGGTCACGTCTCCGGCGGACTTGCCGTACCTGGCGTTTATCG CTCGGTTGCACCTTGGGATCGAGGCCACCAGCTGCCAGGCCGAGCGCAAT TTTTCAGCGCTAGCTCACCTCATCGGTAACCTTCGCTGCAACATGCTTCC GCACAGGGTCGAGCGCATGATGCTCATCCGGCTCAACAGGCGCATGCTCG ACGAGGTTCGCGCGTTCGACGCTGCCGTATCGCGGGCACGAGAAATGGCC ACCAAGAGTGCCGCGAAGTCTGCGGCTGCGCAGGAGCAGAGAGCAAACAA GCCGATCGATATCACCCTCTAGACTAGGGTAGCCGAGAGTGCAGAGTGCT TTGTTGTGGATGTCTGACTACTGTGCCAGAGCTGGTGATGAGGGTTGGGT TTGTTTTGCTAGTTGGGTTGTCAGCCATCGCTTCATCGCGGTGCATTTCT GTTTTGTTTTCTTTTTTCTTGTTTTTTGTTTTTCATTTTTTATTTTTTGT TTTTTCCGTTCTGTTGCTGCTTTTTTAAGAGAAGAGAGACGACAGAGAAA CGGCTTGCCGCTCGTTCAGCCGCCACAAAAATGTGCATATATA
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Coding sequence (CDS) from alignment at P-littoralis_Contig14:862270..864562+

>mRNA_P-littoralis_Contig14.215.1 ID=mRNA_P-littoralis_Contig14.215.1|Name=mRNA_P-littoralis_Contig14.215.1|organism=Pylaiella littoralis U1_48|type=CDS|length=948bp|location=Sequence derived from alignment at P-littoralis_Contig14:862270..864562+ (Pylaiella littoralis U1_48)
ATGGGAGACCTGATGAAGAAGCTGGCAGCGTTGGTCGGCGTCTTCAGCCA
CTCCGCTGTCAACAACGACATGCTGAAGGAAATCCAGCGGCTGGAGGCGG
ATCTTCATCGCGTCTACGAGCTCATCCGGCGAAACGACACCAGGTGGACT
AGCCAGTTCAGGATGATGGCTCGCCTTCTGATCTTGAAGAAGGCGATCAA
CGAGTACTTCCGCCGACTTGCCCAGCAGAACCCCCAGCACAAGCAGCTGA
AACGCAAGTTGACTGCCCACGAGTGGACCGTCACCAACGAGGTGTGCAGC
CTCCTGGACACCGTCTCCGAGGCCACGATCCGCATGCAAGGCGCCGCCGA
CACCCACATCAGCCAGGCGACGTTCATCGTTCACGAGGTGATGGACATGT
TGAAGGACGACTCTCACCCAATCCGTGTGGAGAACGCCGTGGTCACGCCG
CCCCCACAGGCACCGGGCCTCATCCCCACCGAGGAGGAGGAGCAGCAGCA
CCAGACCTCTCTGGCCGAGGTCTCCACGGAGGACACCCAGGTGACTGACC
TCACCCAAGAAGCGCAGGACGTGGTCCAAGTCATGCTGGAGGTGTTGGAA
GAGAAGGGAGTGGGGAAGGCGCTGCAGAGGGTGGAGCGAATGTCCGTGCT
GCTGGACCCGAGGCGGAAAGGTTGCGACGCCGACCAAGTCGGGAACGGCT
CTGAAGCCCTGAGGGCACAAGCCGAAGCGGACTTGAAGGCATTCATCGGC
CACTTCGAGCAGGGGTTCGACACGGTCACGCCGGCGCCGGCACCAGCGGC
CAACACCGACACCACGGAACCTGCTCGCAAGAAGAAGAAGCCTACTTCAA
GATTGGAGGAGCGGCGCGCTGCACGTATGGCGGGGCGGCCGGCGGCGCCA
GCGGTGGGGCCAATCCTCAGGCTGGCGGTACGGGTCGGCGCGTCATGA
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