mRNA_P-littoralis_Contig14.165.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig14.165.1 vs. uniprot
Match: D7G0Y7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y7_ECTSI) HSP 1 Score: 112 bits (279), Expect = 1.190e-25 Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 40 DRDEPSRDWGDDVVLTLTDTGSVVVTVGGHVVIDQRNPNEAQKGTWLKRTLRKINPVAKVKNAFRRS-RSRRSAGSKINNDDSKRDS--IVSNQYSLHVVADGFEVRLDEEFVWGW 378
D D P WGD VL +T+TG VVV++ G +VI+ NP +A+KG W + +RK NP+ KV +AFRR SRR S + DS D+ IVS YSLHVV GFEVRL+ EFVWGW
Sbjct: 542 DSDGPLPYWGDGTVLKVTETGDVVVSIAGEIVIEMANPRKAKKGGWFRNHVRKHNPIRKVGDAFRRHLHSRRKGSSNSDPSDSVHDTDTIVSTDYSLHVVEKGFEVRLEGEFVWGW 657
BLAST of mRNA_P-littoralis_Contig14.165.1 vs. uniprot
Match: D8LLQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ3_ECTSI) HSP 1 Score: 112 bits (279), Expect = 1.370e-25 Identity = 74/151 (49.01%), Postives = 88/151 (58.28%), Query Frame = 1
Query: 7 EATAAVDKTKNDRDEPSRDWGDDVVLTLTDTGSVVVTVGGHVVIDQRNPNEAQKGTWLKRTLRKINPVAKVKNAFRRSRSRR----SAGSKINNDDSKRDSIVSNQYSLHVVADGFEVRLDEEFVWGWDVSTSR*PP-------GTCVSFF 426
EATAAV K R P R +GDD+VL +T TG VVVTVGG +V+++RNP+ Q G WL++ LRK NP+A + RR R RR S GS + D IVS YSLHV GFEV+LD FVWGWDV P GTC F
Sbjct: 1553 EATAAVAKNVPGR-PPQRYFGDDIVLQVTKTGDVVVTVGGRIVVEKRNPSGGQGG-WLEKQLRKANPLATLGRIIRRHRLRRERNGSGGS------NGVDGIVSFGYSLHVAEKGFEVQLDGVFVWGWDVDRENPQPFDVGHALGTCEFCF 1695
BLAST of mRNA_P-littoralis_Contig14.165.1 vs. uniprot
Match: D8LLQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ0_ECTSI) HSP 1 Score: 103 bits (256), Expect = 1.690e-22 Identity = 64/144 (44.44%), Postives = 83/144 (57.64%), Query Frame = 1
Query: 1 GSEATAAVDKTKNDRDEPSRDWGDDVVLTLTDTGSVVVTVGGHVVIDQRNPNEAQ---------KGTWLKRTLRKINPVAKVKNAFRRSRSRRSAGSKINNDDSKRDSIVSNQYSLHVVADGFEVRLDEEFVWGWDVSTSR*PP 405
GSEAT AV K P R +GDD+VL +T TG VVVT+GG +V+++RNP Q +G W+++ LRK N +A + RR R RR + D + D IVS YSLHVV GFEV+L+ FVWGW + T P
Sbjct: 1550 GSEATTAVAKNVPSS-PPQRYFGDDIVLQVTKTGDVVVTIGGQIVMEKRNPLRRQAENLDQSGGRGNWVEKQLRKANSLATLGRIIRRHRLRRENEGGV--DSNGADEIVSFGYSLHVVEKGFEVKLEGVFVWGWYLDTESPEP 1690
BLAST of mRNA_P-littoralis_Contig14.165.1 vs. uniprot
Match: D8LN98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN98_ECTSI) HSP 1 Score: 102 bits (254), Expect = 2.860e-22 Identity = 66/143 (46.15%), Postives = 84/143 (58.74%), Query Frame = 1
Query: 4 SEATAAVDKTKNDRDEPSRDWGDDVVLTLTDTGSVVVTVGGHVVIDQRNP--NEAQK-------GTWLKRTLRKINPVAKVKNAFRRSRSRRSAGSKINNDDSKRDSIVSNQYSLHVVADGFEVRLDEEFVWGWDVSTSR*PP 405
SEATA + K P+ +GDD+VL +T TG VVVTVGG +V+++RNP +A+K G WL+R L K NP+A + RR R RR K + + D VS YSLHVV GFEV+LD FVWGWD+ PP
Sbjct: 558 SEATAVMAKNGPSIPPPTY-FGDDIVLQVTKTGDVVVTVGGRIVVEKRNPFARQAEKLDPSGGRGNWLERQLWKANPLATLGRIIRRRRLRREG--KSSGGSNGIDENVSFGYSLHVVQKGFEVQLDGVFVWGWDLDKENPPP 697
BLAST of mRNA_P-littoralis_Contig14.165.1 vs. uniprot
Match: D8LLS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS3_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 1.560e-17 Identity = 59/135 (43.70%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 19 AVDKTKNDRDEPSRDWGDDVVLTLTDTGSVVVTVGGHVVIDQRNPNEAQKGTWLKRTLRKINPVAKVKNAFRRSRSRRSAGSKINND-------------DSKRDSIVSNQYSLHVVADGFEVRLDEEFVWGWDV 384
A D K P WGDDVVL +TD G V+VTVG VV+ +RNPN +K W+K+ L P KVK FRR R G + ND D + ++ S YSLHVV +GF+VRL+ FVWGW V
Sbjct: 1372 AADMPKAISSTPEGYWGDDVVLKVTDMGDVLVTVGDRVVVQKRNPN--RKVGWVKK-LGNSRPAKKVKGIFRRLGRR---GKRDKNDNXXXXXTRENNARDDDKGAVRSTLYSLHVVENGFQVRLEGVFVWGWYV 1500
BLAST of mRNA_P-littoralis_Contig14.165.1 vs. uniprot
Match: D8LLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ5_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 3.440e-16 Identity = 55/126 (43.65%), Postives = 72/126 (57.14%), Query Frame = 1
Query: 52 PSRDWGDDVVLTLTDTGSVVVTVGGHVVIDQRNPNEAQKGTWLKRTLRKINPVAKVKNAFRR-SRSRRSAGSKINNDDSKRDS--------------IVSNQYSLHVVADGFEVRLDEEFVWGWDV 384
P WGDDVVL +TD G V+V VG VV+ +RNPN +K W+K+ L P KVK FRR R + + I+ND + R++ + S YSLHVV +GF+VRL+ FVWGW V
Sbjct: 1548 PEGYWGDDVVLKVTDMGDVLVAVGDRVVVQKRNPN--RKVGWVKK-LGNSRPAKKVKGIFRRLGRRGKRDKNDIDNDSNTRENNAXXXXXXXDNKGAVRSTLYSLHVVENGFQVRLEGVFVWGWYV 1670
BLAST of mRNA_P-littoralis_Contig14.165.1 vs. uniprot
Match: D7G9F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F6_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 1.340e-14 Identity = 51/123 (41.46%), Postives = 70/123 (56.91%), Query Frame = 1
Query: 46 DEPSRDWGDDVVLTLTDTGSVVVTVGGHVVIDQRNPN-EAQKGTWLKRTLRKINPVAKVKNAFRRSRSRRSAGSKINNDDSKRDSI-----------VSNQYSLHVVADGFEVRLDEEFVWGW 378
DE R DV L +T+TG V+VTVG VV+ +RNP +K +WL+R + K PV K+K+ F R RR G+ ++ ++ D VS YSLHVV +G EVRL+ F+WGW
Sbjct: 292 DEARRXXXXDVALKVTNTGDVLVTVGDLVVVQKRNPMWTKKKESWLQRKVAKSKPVKKIKDVFGRL-GRRGKGNGKTDNKARSDXXXXXXGNGDGAPVSTMYSLHVVENGLEVRLEGVFMWGW 413 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig14.165.1 >prot_P-littoralis_Contig14.165.1 ID=prot_P-littoralis_Contig14.165.1|Name=mRNA_P-littoralis_Contig14.165.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=133bp GSEATAAVDKTKNDRDEPSRDWGDDVVLTLTDTGSVVVTVGGHVVIDQRNback to top mRNA from alignment at P-littoralis_Contig14:674265..675387+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig14.165.1 ID=mRNA_P-littoralis_Contig14.165.1|Name=mRNA_P-littoralis_Contig14.165.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1123bp|location=Sequence derived from alignment at P-littoralis_Contig14:674265..675387+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig14:674265..675387+ >mRNA_P-littoralis_Contig14.165.1 ID=mRNA_P-littoralis_Contig14.165.1|Name=mRNA_P-littoralis_Contig14.165.1|organism=Pylaiella littoralis U1_48|type=CDS|length=399bp|location=Sequence derived from alignment at P-littoralis_Contig14:674265..675387+ (Pylaiella littoralis U1_48)back to top |