mRNA_P-littoralis_Contig14.127.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 268 bits (686), Expect = 2.530e-85 Identity = 139/185 (75.14%), Postives = 155/185 (83.78%), Query Frame = 2
Query: 413 SSRNRNFTGKLGIFPFTEQCVARRNSRNRAAGTLETKCVEVTKELWKRLII----PAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGWNIKLIINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRVFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKD 955
++R NFTGKLGIF FT Q A+RNSRNRAAGT+ETKCVEVTKE++KR ++ PAIKA WPGGRGR IYIQ DN PSHRIN DPDVVAA ADGW+I+LI NQPSNSPDTNILDLGFFN++QSLQDR TPRTVDE I EVKR F Q+P+ KVWVSLQAILQ IILA G+NTFKLPH+KKD
Sbjct: 82 TNRCCNFTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLI-NQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ-IILAKGNNTFKLPHLKKD 264
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 229 bits (585), Expect = 3.790e-67 Identity = 120/199 (60.30%), Postives = 147/199 (73.87%), Query Frame = 2
Query: 281 FICQNGQKYYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQCVARRNSRNRAAGTLETKCVEVTKELWKRL---IIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGWNIKLIINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRVFHAQTPTILGK 868
+IC+ GQ+YY+ Y E +P RKVQHKSH+ KVMFLAAVARPR+DSSR+R F GK+GI+PFT Q A+RN RN AAGT+ T VEV + L+K+L + P I+A +P I+ QQ+NAP HR +DPDVVAA I+L+ NQP NSPD NILDLGFFNSIQSLQDRTTP TV+EL+AEV+R AQ P LG+
Sbjct: 66 YICKQGQRYYF-YEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYKKLNNNVFPDIRAKFPSSP--IIFAQQENAPGHRAMEDPDVVAAAGQGAGRIELV-NQPPNSPDCNILDLGFFNSIQSLQDRTTPTTVEELVAEVERALWAQKPETLGR 260
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 226 bits (575), Expect = 6.120e-67 Identity = 116/229 (50.66%), Postives = 160/229 (69.87%), Query Frame = 2
Query: 281 FICQNGQKYYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQCVARRNSRNRAAGTLETKCVEVTKELWKRL----IIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGWNIKLIINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRVFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKD 955
+I Q +++Y L+ DE P RK Q K HITKVMFL AVARPR DS+ + + GK+G++PF E +A+R S+NR GT T + VTK +++R +IPAI+A WPG RG IY+QQDNA H DDP+V+AA +GWNI+L+ QP+ SPD N+LDLGFFN+IQSLQ +TT RT+D+LI V+ F +L K +++LQ +++E + + GDN +KLPH+KKD
Sbjct: 178 YITQVNRRFY-LWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMA-QPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKKD 404
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA) HSP 1 Score: 218 bits (556), Expect = 6.220e-65 Identity = 113/219 (51.60%), Postives = 151/219 (68.95%), Query Frame = 2
Query: 311 YLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQCVARRNSRNRAAGTLETKCVEVTKELWKRL----IIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGWNIKLIINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRVFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKD 955
YL+ DE +P RKVQ K HITKVMFL AVARPRFD R + GK+G++P E VA R S+NR GT T + VTK +++RL +IPAI+A WPG RG IY+QQ+NA H DD +VVAA +GWNI+L+ QP+ SP+ N+LDLGFFN+IQSLQ +T RT+D+LIA V+ + + + K +++LQ +++E GDN +KLPH+KKD
Sbjct: 120 YLWHDEPIPQRKVQSKRHITKVMFLCAVARPRFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPHVAVDDAEVVAASRKNGWNIQLVA-QPAMSPNFNVLDLGFFNAIQSLQHQTAMRTIDDLIASVQDAYSSLASQVWDKTFMTLQKVMEEAFKLEGDNIYKLPHLKKD 337
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Match: A0A397C8F5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C8F5_9STRA) HSP 1 Score: 212 bits (540), Expect = 3.530e-63 Identity = 114/221 (51.58%), Postives = 146/221 (66.06%), Query Frame = 2
Query: 308 YYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQCVARRNSRNRAAGTLETKCVEVTKELWKRL----IIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGWNIKLIINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRVFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKDR 958
YYL+ DE +P RK K HI KVMFL AVARPRFD R + GKLG++PF A+R S+NR GTL T V VTK++++ +IP IKA WPG R + IYIQQDNA H DDP VVAA +DGW I+L+ QP+ SPD N+LDLGFFNSIQ+LQ R +D+L+A V F+ IL K +V+L +++E + GGDN++KLPH KD+
Sbjct: 51 YYLWYDEAIPVRKCSSKRHIVKVMFLTAVARPRFDYVRKTMWDGKLGMWPFVAVQPAQRTSKNRDRGTLVTTPVTVTKKVYREYLLQHVIPRIKAVWPGHRDQPIYIQQDNARPHVEVDDPAVVAAGRSDGWAIQLVA-QPAMSPDFNVLDLGFFNSIQALQHRQVVTGIDDLVAAVHGAFNELDWRILDKTFVTLVRVMEESMKMGGDNSYKLPHQSKDK 270
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25) HSP 1 Score: 213 bits (542), Expect = 1.510e-62 Identity = 116/222 (52.25%), Postives = 148/222 (66.67%), Query Frame = 2
Query: 308 YYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQCVARRNSRNRAAGTLETKCVE-VTKELWK----RLIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGWNIKLIINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRVFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKDR 958
YYL DE+ P R + K +ITKVMF+ AV+RP+FD++ + GK+GIFPFTE A+R S+NRA GT+ETK + VTK + + IIPAIKA WP G + IYIQQDNA H DP+ A +DG++I+LI QP NSPDTNILDLGFF +IQSLQ +TVDEL+ V F +P L KV++SLQA L EI+ G N +K+PH+ KDR
Sbjct: 148 YYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDANGQATYDGKVGIFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWPVGASKDIYIQQDNATPHITAMDPEFQAVAKSDGFDIQLIC-QPPNSPDTNILDLGFFRAIQSLQHEKPCKTVDELVGNVCSSFTELSPQTLNKVFLSLQACLTEILHCRGGNGYKVPHINKDR 368
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Match: A0A024UI08_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI08_9STRA) HSP 1 Score: 209 bits (532), Expect = 3.730e-62 Identity = 106/230 (46.09%), Postives = 149/230 (64.78%), Query Frame = 2
Query: 281 FICQNGQKYYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQCVARRNSRNRAAGTLETKCVEVTKELWKRL----IIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGWNIKLIINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRVFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKDR 958
F + YYL+ DE VP RK Q K H+ KVMFL AVARPRFD+ R +++ GK+G +PFT A RNS+N G T+ V VTKE+++ +IPAIK+ WPG R + I++QQD+A H DD V+AA +DGW+I+L QPS SPD N+LDLG FN+IQSLQ T T++EL+ V + + P +L K +++LQ +++ ++ GDN +K+PH KD+
Sbjct: 42 FYISKVNRRYYLWNDEPVPMRKCQSKRHLMKVMFLTAVARPRFDAHRRKSWDGKIGTWPFTMVRPALRNSKNFKRGDAITEPVVVTKEVYRSFLVDKVIPAIKSRWPGRRSKTIWVQQDSARPHVAVDDAPVLAAGQSDGWDIRLCA-QPSQSPDMNVLDLGLFNAIQSLQHHTASYTIEELVLAVSKAYDDLDPLVLDKTFMTLQKVMECVLKMDGDNVYKIPHANKDK 270
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Match: A0A6A5AGK8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AGK8_9STRA) HSP 1 Score: 213 bits (543), Expect = 4.470e-62 Identity = 108/221 (48.87%), Postives = 146/221 (66.06%), Query Frame = 2
Query: 308 YYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQCVARRNSRNRAAGTLETKCVEVTKELWKRL----IIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGWNIKLIINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRVFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKDR 958
YY++ DE+VP RK + K HI KVMFL AVARPRFD ++ + GK+G +PF Q A+R S+ R G L T + VTK +++ +IP+IK WPG RG IYIQQDNA H DD V AA ADGWNI+L+ QP+ SPD N+LDLGFFNSIQ+LQ +D+L++ V+ F +L K +++LQ +L+E + GGDN++KLPH+ KD+
Sbjct: 185 YYMWHDEDVPVRKCKSKRHIVKVMFLTAVARPRFDYAKKTMWDGKIGTWPFVSQVAAKRKSKKRPRGALVTTPMTVTKTIYRDFLLTHVIPSIKRMWPGRRGSPIYIQQDNARPHVALDDAAVTAAGVADGWNIQLVC-QPAMSPDFNVLDLGFFNSIQALQHHRIANGIDDLVSAVESAFGELDWRVLDKTFITLQRVLEESLRMGGDNSYKLPHLGKDK 404
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Match: A0A485LD71_9STRA (Aste57867_19703 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD71_9STRA) HSP 1 Score: 209 bits (531), Expect = 4.830e-62 Identity = 108/230 (46.96%), Postives = 153/230 (66.52%), Query Frame = 2
Query: 281 FICQNGQKYYYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQCVARRNSRNRAAGTLETKCVEVTKELWKRL----IIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGWNIKLIINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRVFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKDR 958
F+ Q ++YY L+ DEE+P RK K HI KVMFL AVARPR+D R+R + GK+G +PF E VA+R S+NR G TK + VTK+++++ +IPAIK+ WPG IY+QQDNA H D V +A DGW+IKL QP+ SPD N+LDLGFFN+IQSLQ R+ +T+DEL+ V + F+ +L K +++LQ +++E + G+N + LPH++KD+
Sbjct: 13 FLTQINRRYY-LWPDEELPVRKCNSKRHIVKVMFLTAVARPRWDFKRHRMWDGKIGTWPFIEHTVAQRRSKNRDKGAPITKPLNVTKKVYRQYLIDKVIPAIKSQWPGQHRHTIYLQQDNAKPHVAVSDSAVCSAGHEDGWDIKLTA-QPAMSPDFNVLDLGFFNAIQSLQHRSLTQTIDELVVAVHKAFNELEWRVLDKTFMTLQKVMEESLKQNGNNAYLLPHIQKDK 240
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034) HSP 1 Score: 211 bits (536), Expect = 2.950e-61 Identity = 116/222 (52.25%), Postives = 145/222 (65.32%), Query Frame = 2
Query: 308 YYLYTDEEVPTRKVQHKSHITKVMFLAAVARPRFDSSRNRNFTGKLGIFPFTEQCVARRNSRNRAAGTLETKCVE-VTKELWK----RLIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGWNIKLIINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRVFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKDR 958
YYL DE+ P R + K +ITKVMF+ AV+RP F + GK+GIFPFTE A+R S+NR GT+ETK + VTKE+ + IIPAIKA WP + IYIQQDNA H DPD AA +DG+ I+LI QP+NSPDTNILDLGFF +IQSLQ +TVDEL+ V F +P L +V++SLQA L EI+L G N +K+PH+ KDR
Sbjct: 185 YYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKAIHSVTKEVMRDCLINKIIPAIKAKWPVWASKDIYIQQDNATPHITAMDPDFQAAANSDGFKIQLIC-QPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILLCRGGNGYKVPHINKDR 405 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig14.127.1 >prot_P-littoralis_Contig14.127.1 ID=prot_P-littoralis_Contig14.127.1|Name=mRNA_P-littoralis_Contig14.127.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=268bp MATRQRDWSGRCDGSPAVLEVGTNSTTTSKTSFTLTRNGFTFICQNGQKYback to top mRNA from alignment at P-littoralis_Contig14:518164..519143+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig14.127.1 ID=mRNA_P-littoralis_Contig14.127.1|Name=mRNA_P-littoralis_Contig14.127.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=980bp|location=Sequence derived from alignment at P-littoralis_Contig14:518164..519143+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig14:518164..519143+ >mRNA_P-littoralis_Contig14.127.1 ID=mRNA_P-littoralis_Contig14.127.1|Name=mRNA_P-littoralis_Contig14.127.1|organism=Pylaiella littoralis U1_48|type=CDS|length=804bp|location=Sequence derived from alignment at P-littoralis_Contig14:518164..519143+ (Pylaiella littoralis U1_48)back to top |