mRNA_P-littoralis_Contig139.56.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig139.56.1
Unique NamemRNA_P-littoralis_Contig139.56.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: D8LRN9_ECTSI (Rubredoxin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN9_ECTSI)

HSP 1 Score: 625 bits (1612), Expect = 1.630e-214
Identity = 328/470 (69.79%), Postives = 385/470 (81.91%), Query Frame = 3
Query:  207 MAGGMRRRDTAAAAAVGVAALALSGS-STVNAFIAVTSKGGLRSTAPRMLATRQLQMMAGGPRGRSGGG-VSIEGADGARVILASAMPIDSI--RQRINVDGDEYGDGEMMEGAPAAASTSMQQEEYQGFTGAPKRQTNQIVDPNSREATLSRKNNLLFSGLVLATISAGVWVAGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKLGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAANGAEMLRIRIRNMAESALKAAIEAVPEGQLLESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1604
            MA GM RR     AAVGV ALALSG  S+ +AF+   SKGGLRS APR  A R LQM  GGPRGRSGG  V IEGADG+RV++ASAMP+  I  +Q ++VDGD Y D EM+EGA  AAS  MQQE+YQGFTG  +R+TNQ+VDPNSREATL+RKN LLF GLV+AT++AGVWV G AFV+RQT LVEAFADEMTYHIGD++EMELC+KEYKGKLGP +YREAMFK CM+++G++KAVTLETVR++K I K F+L+  KGVKL+VAA R TD+SQSNVRSKLLFLGGL+A+GD KA++ALEPL++NVQ+SF  +GA ML+I+ R+MAESAL+AAI  VPEG++LESGWEELGMDDQWA+RVA D+V+N+DPAGGLDFYKTGGP T DAESDP+AAKALAAME D                EG AK++EC  CGYKMFVAKGREFKFFGD FKCPECGAGKNKF E+ MDDD
Sbjct:    1 MARGMMRRQ----AAVGVVALALSGGGSSASAFVLGPSKGGLRSKAPRTPAVRPLQMAGGGPRGRSGGAPVRIEGADGSRVVVASAMPVQGIPQQQSMSVDGDGYDDSEMVEGAIGAAS-GMQQEDYQGFTGGQERRTNQVVDPNSREATLTRKNKLLFGGLVVATVTAGVWVTGTAFVNRQTDLVEAFADEMTYHIGDEKEMELCIKEYKGKLGPAMYREAMFKECMLAVGRKKAVTLETVRSIKFIFKQFRLSPLKGVKLVVAATRRTDRSQSNVRSKLLFLGGLVAEGDIKAQEALEPLRQNVQSSFPVDGANMLKIKERDMAESALRAAISDVPEGEMLESGWEELGMDDQWAARVATDMVDNDDPAGGLDFYKTGGPPTGDAESDPEAAKALAAMEEDMAAKKTEPQDEKEPEAEGTAKAYECTVCGYKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMDDD 465          
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A835Z4L2_9STRA (Rubredoxin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4L2_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.140e-47
Identity = 119/334 (35.63%), Postives = 169/334 (50.60%), Query Frame = 3
Query:  606 TNQIVDPNSREATLSRKNNL------LFSGL-VLATISAGVWVAGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKLGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAANGAEMLRIRIRNMAESALKAAIEAVPEGQLLESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTE 1586
            T  +VDP  R     ++N        +F+ L VL  +   V+ AG ++  RQ  LVE +A EMT  I    EM+ C KEYK KLGPK +R  MF A +  + ++K +T +T+ A   + + F     K  KL+ AA +   + Q  +RSKLLF G  ++   + A + L+PLK  +  S+ + GA+++     ++AE AL+ +  A  E   L  GWE LGM +  A     +        GG   Y        D ++  +AAK  A                     EG A++FEC  CGY ++VAKGRE+KFFGD FKCPECGA K KF E
Sbjct:   15 TGSLVDPAERIRLQQQRNQPGSARGEIFANLAVLGVLVGSVYFAGKSYFTRQETLVEGYASEMTDVISSSTEMDACHKEYKRKLGPKQFRGEMFAAFITELARKKPITCQTMMAADYVRRKFGFKDVKVAKLLAAAGQAVARKQPGLRSKLLFYGQRLSGSSDAAAKQLQPLKDLLAQSYRSGGAQIVESASISIAEQALRDSAHASGE---LPEGWELLGMSEAQARETLGE-------GGGEAMYAKLVKEAKDRDAATEAAKGGAGRGG-------------GSSEEGTARAFECGSCGYTLYVAKGREWKFFGDDFKCPECGASKGKFQE 325          
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A1Z5JEC1_FISSO (Rubredoxin-like domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEC1_FISSO)

HSP 1 Score: 146 bits (369), Expect = 5.530e-34
Identity = 107/324 (33.02%), Postives = 169/324 (52.16%), Query Frame = 3
Query:  684 LATISAGVWVAGNAFVDRQTQLVEA----FADEMTYHIGDDREMELCVKEYKGKL-GPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFA-ANGAEMLRIRIRN-MAESALKAAIEAVPEGQL-LESGWEELGMDDQWASRVAMD------VVENEDPAGGLD--FYKTGGPATNDAE-SDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1604
            +A  +AG W   N    R TQ  +A    FA EM YH GD +EMELCVK+Y  KL      ++AM K  + +  ++K V+ + + ++  +  LF+LN  K  + +VA  +     + +   KLLFLG  I K  E  + AL P+K+ +++++  A  AE L    ++ +AE+A +A ++A  + Q  L  GW+ LG+D + A+++  +      +   E   GG    + K G     D    +P+ AK      ++                + V+  +EC ECGY +F+A+GRE KFFG+GF+CPECGA K+KF   D  +D
Sbjct:  136 IALFAAGRW-GYNRVAGRVTQSADATLAAFAKEMLYHDGDFKEMELCVKDYNKKLLWLPTRKDAMLKTYLEAYAKKKTVSPQAIASISYVFTLFQLNEAKAAETLVALCKKMGTEKISSAGKLLFLGSRILKSPE-GKNALTPIKELIKSTYRDAQVAETLVETSQHAIAEAAYRATVQAAGKNQKSLTKGWQALGLDKEKATQIFEEEAKEGFISARETMYGGQTQKYDKKGNRLNPDGSYENPEDAKKAEEESSE----------------DTVSNVYECGECGYTLFIAQGRETKFFGEGFRCPECGASKDKFNARDDVED 441          
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A7S3DRF8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DRF8_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.610e-33
Identity = 119/380 (31.32%), Postives = 186/380 (48.95%), Query Frame = 3
Query:  528 EGAPAAASTSMQQEEYQGFTGAPKRQTNQIVDPNSREATLSRKNNL----LFSGLVLATIS---AGVWV---AGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKL---GPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFA--ANGAEMLRIRIRNMAESALKAAIEAVPEGQL-LESGWEELGMDDQWASRVAMDVVEN------EDPAGGLD--FYKTGGPATNDAE-SDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEAD 1592
            E  P A++   Q E+ Q +         ++ D N   A   +  ++    + S L++ +I+   AG W      +  V+    +++AFA EM YH GD  EM+LC  +Y  KL   GP    E M K  +    ++K V+ +++  +  +  L KL+  K   ++V   R    ++ +   KLLFLG  I K  +   +ALEP+K  ++A++   A    ++    + +AE++ +AA++A  + Q  L  GWE LG+D   A R+  +  E       E   GG    + K G     D   +DP+ AKA AA EA+                E ++  +EC ECGY +F+A+GRE KFFG  FKCPECGA K+KF   D
Sbjct:  140 EADPYASAFDSQMEKMQSYA-------ERVEDANQGSALTEKFKSMDLQDIISTLIIPSIALFAAGRWAFNRVSSRVVENTDSILDAFAREMIYHDGDFDEMKLCYNDYSRKLLILGPTR-TETMLKMYLEVYAKKKTVSPQSIVTLSYVFTLAKLSEEKAADVLVKLCRQMGPNKISSAGKLLFLGSRILKSPD-GRKALEPIKDMIKATYRDEAVAETLVDTSQQAIAEASYRAAVQAAGKSQTALSLGWETLGLDRDTAQRIFDEEAEEGFVSARETMYGGQSTKYDKKGRIIAKDGSLADPEEAKA-AAEEAEEE--------------EAISNVYECGECGYTLFIAEGRESKFFGTDFKCPECGASKDKFEARD 495          
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A1E7FDG3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDG3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 6.230e-32
Identity = 105/326 (32.21%), Postives = 165/326 (50.61%), Query Frame = 3
Query:  666 LFSGLVLATISAGV---W----VAGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKL---GPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAA-NGAE-MLRIRIRNMAESALKAAI-EAVPEGQLLESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1604
            + S L++ TI AG    W    V+G    D+ T  +++FA EM YH GD  EM+LC K+Y  KL   GPK     M K+ +    ++K V+ +++  +  +  +FKL+  K  +L+V+  +     + +   KLLF G  I K  E  + AL P++  ++ S+     AE M+    + MAE+A + ++ E   + + L  GWE LG+D   A R+    +E ED     D + T        +S    AK    ++ D                +  +    CQ+CG+ +F+AKGRE KFFG+GF CPECGA K++F   D+D+D
Sbjct:  142 IISTLIVPTIFAGAGLKWGLTKVSGKVS-DKVTIALDSFAKEMVYHDGDFEEMKLCYKDYSKKLVLLGPKK-NSIMIKSYLKLYSKQKLVSPKSISTLSYVFSIFKLSEEKAAQLLVSLCKEMGNERMSSAGKLLFFGSRILKSPE-GKAALTPIRDMIKGSYREIEVAETMVETSQQAMAEAAFRTSVLEGGKDQKNLTMGWEVLGLDKDTAVRI---FIEEED-----DGFITAREKMYGGQSTKYDAKGNI-IDKDGKLKDPDNAIGDDEEAQPTSNVMGCQDCGFTLFIAKGREAKFFGEGFVCPECGAAKDRFDPVDIDED 455          
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A448YYL6_9STRA (Rubredoxin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYL6_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.870e-28
Identity = 105/321 (32.71%), Postives = 148/321 (46.11%), Query Frame = 3
Query:  681 VLATISAGVWVAGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKL---GPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAANGA---EMLRIRIRNMAESALKAAIEAVPEGQL-LESGWEELGMDDQWASRVAMD------VVENEDPAGGLDF-YKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDD 1601
            V A +  GV  A     D+    +E FA+EM YH GD  EM+LCV  Y  KL   GP   +  M K  +    +++ V+ + +        LFKL+  K   +MV+          +   KLLF G  I K  E  + AL+P+++ + +S+   G     M+      MAE+A K A+    + Q  L  GWE LG+D + A R+  +      + E E   GG    Y   G   +D  +      A+ A E +                +  +   EC EC Y +F+AKGRE KFFGD FKCPECGA K+KF   DM D
Sbjct:  156 VAAGVRWGVTKASGKVSDQADGSLEDFANEMVYHDGDFEEMKLCVNAYNKKLMWLGPNKSK-TMLKKYLKLYCKKRIVSPQAI-------SLFKLSEDKAAAIMVSLCEDMGVDGLSTAQKLLFFGTRILKSAE-GKAALDPIREILXSSYRGEGMVAESMVETSQTAMAENAYKTAVVNGGKDQTSLTVGWEVLGLDKEEAMRIFEEEAEAGFISEREKLYGGQSQKYDDKGNXIDDDGNLEDPENAIGADEPE----------------KPASNVMECTECSYTLFIAKGREAKFFGDNFKCPECGADKDKFEPKDMSD 451          
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A7S2WQG7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WQG7_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.510e-27
Identity = 103/317 (32.49%), Postives = 158/317 (49.84%), Query Frame = 3
Query:  681 VLATISAGVWVAGNA-------FVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGK----LGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASF----AANGAEMLRIRIRNMAESALKAAIEAVPEGQ-LLESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFT 1583
            V   ++AG WV           F     Q +  +ADEM +H GD  EM++C  +Y  K    LGP   ++ M K  +    ++K V+ + + ++  +  L+KL+  K   ++VA   +  +  S+   KLLF G  I K  E     LEP+K+ +  S+    + +G E++      M E+A + A+ A  + Q  L  GWE LG+D++ A+ +  +V +     G    Y +G       +S  +  +    +E       XXXXXXXXX        FEC  CGY +F+AKGR+FKFF D F+CPECGA K+KF 
Sbjct:  182 VFIPLTAGYWVIKQGYEKSSVIFAGSAEQTLVDYADEMVFHDGDFEEMKMCHNDYSKKKLVWLGPNK-KDTMMKRYLEIYAKKKTVSPQAISSLSYVFSLYKLSEDKAADILVALCNSMPEKISSA-GKLLFFGRCILKSKE-GRARLEPIKEMLALSYRDGGSISGEEIVERSQIAMGEAAYRTAVAAAGKKQESLTVGWEVLGLDEETATTIFNEVAKIGFKTGREVKYGSG---NQQYDSKGRRLEKTGKLENPEEATDXXXXXXXXXENTPTGSVFECGGCGYTLFIAKGRDFKFFSDTFECPECGAKKDKFV 492          
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A7S2XMQ9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMQ9_9STRA)

HSP 1 Score: 127 bits (319), Expect = 3.250e-27
Identity = 102/325 (31.38%), Postives = 158/325 (48.62%), Query Frame = 3
Query:  663 LLFSGLVLATISAGVWVAGNAFV---DRQTQLVEAFADEMTYHIGDDREMELCVKEYK----GKLGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAANGAEMLRIRI---RNMAESALK-AAIEAVPEGQLLESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKAL--AAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMD 1598
            L+F  +V A++    W  G A V   ++  +L+EA+A EM YH GD  EM+L  K+Y       LGP L ++ M K+ +    ++K V+ +++  +  +L L+KL+  K  + +        K++ +   KLLF    I K  E A+ AL P+K+ + AS+     +  +I     + + E+A K   I    +   L  GW+ LG+      + A   +  E    G   ++    +    + D K+ +AL      AD                   + +FEC ECG+ +FVAKGREFKFFGD FKCPECGAGK+KF     D
Sbjct:  177 LIFPSIVGASLLK--WAYGKAAVYTTEKTAELLEAYATEMCYHDGDVEEMKLAHKDYSRVKLAYLGP-LKKDKMLKSFLTVYAKKKNVSPQSISTLSHVLTLYKLSEEKAAQAIKELCMDLGKNKISSVGKLLFYATQILKSKE-AKAALAPIKQMMAASYEGMDVDANQIVTGSQKAIGEAAYKFTVINGGKKQTKLPEGWKILGL-----KKEAAQAIFEECQKEGFISWREEHYSMQSTKYD-KSGRALDDQGKRADGTDPTEDAPEEEEELSMSTSNAFECGECGFTIFVAKGREFKFFGDNFKCPECGAGKDKFVGRSDD 491          
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: B7GE71_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GE71_PHATC)

HSP 1 Score: 126 bits (316), Expect = 7.360e-27
Identity = 101/331 (30.51%), Postives = 164/331 (49.55%), Query Frame = 3
Query:  666 LFSGLVLATI---SAGVW----VAGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKLGPKLY----REAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASF--AANGAEMLRIRIRNMAESALKAAIEAVPEGQL-LESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESD---PKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKF-TEADMDDD 1604
            + + L+L ++   +AG W    V G   V R   L+++FA EM YH GD  EM+LC+++Y  KL   +Y    R+ M K  + +  ++K V+   + ++  +L  F+++      L+V+  R     +     KLLFLG  I K  E  + AL P+K  +++++   +    M+    + +AE++ ++ + A  + Q  L  GW+ LG++   A R+  +  +          Y  GG  T   +      +A K     +AD                 GV+  +EC ECGY +FVA+GRE KFFG GFKCPECGA K +F    DMD++
Sbjct:  171 IIATLILPSVVVFAAGRWGFNKVYGKVQV-RTEALLDSFAKEMLYHDGDYNEMKLCIQDYNQKL---IYLPNRRDVMLKRYLAAYAKKKTVSPLAISSLSFVLTQFQMSEEAAAALLVSLCRQMGTDKIASAGKLLFLGSCILKSPE-GQAALTPIKDLIKSTYREVSVAEAMVETSQQAIAEASYRSVVLAAGKQQKSLTPGWDVLGLERDVAQRIYDEEAKEGFRTERETMY--GGQTTRYDKKGRIVDRAGKLKNPADADEDDDDEPQG--------GVSNVYECGECGYTLFVAQGRESKFFGTGFKCPECGAAKKQFKARDDMDEE 486          
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A7S2K0X4_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0X4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.730e-26
Identity = 93/302 (30.79%), Postives = 145/302 (48.01%), Query Frame = 3
Query:  702 GVWVAGNA---FVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKLGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAANGAEMLRIRIRNMAESALKAAIEAVPEGQL-LESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKS-FECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEAD 1592
            G WV  N+   +   Q   + ++A+EM YH GD  EM++C  EY+ KLG    R  M  + +    ++K V+ + + ++  +  L+ L+     K++V AA     +Q   RSKLLF G  I K  E   + L+P++  + +++ + G  ++    + + ++A K A+ A  + Q  L  GWE LG+    A  V   V  +   +     Y  GGP     E   +       M+ +                +G   S FEC  CGY +F AKGREFKFF D FKCPECG+ K++F   D
Sbjct:  143 GNWVYKNSKFLYDKGQADTLASYANEMIYHDGDFEEMKMCQNEYRRKLGIGPKRRKMLTSYLEQYAKKKVVSPQAISSLSYVFSLYNLSEKDAAKVIVKAAENLS-TQPASRSKLLFFGEHILKSPEGLTE-LQPIRDMLASAYRSGGPAIVANAQKTIGQAAYKNAVIAAGDEQTSLTVGWELLGLTKDEAETVYEAVKSDGFQSDAKKLY--GGPKQEFDEKGRRIDTKGKLMDKEDEDSAS----------DGPKGSIFECGNCGYTLFPAKGREFKFFPDDFKCPECGSPKDQFIGRD 430          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRN9_ECTSI1.630e-21469.79Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A835Z4L2_9STRA1.140e-4735.63Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A1Z5JEC1_FISSO5.530e-3433.02Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A7S3DRF8_9STRA2.610e-3331.32Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1E7FDG3_9STRA6.230e-3232.21Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A448YYL6_9STRA7.870e-2832.71Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A7S2WQG7_9STRA2.510e-2732.49Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2XMQ9_9STRA3.250e-2731.38Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B7GE71_PHATC7.360e-2730.51Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2K0X4_9STRA2.730e-2630.79Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig139contigP-littoralis_Contig139:229510..239236 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRN9
Model size2736
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons10
Evalue4.09e-221
EggNOG OGs2E1U7@1|root,2S947@2759|Eukaryota
Ec32 ortholog descriptionRubredoxin-type fold
Ec32 orthologEc-12_000500.1
Cds size1407
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig139.56.1prot_P-littoralis_Contig139.56.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig139 230633..239030 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789641.0464468-UTR-P-littoralis_Contig139:229509..2306321680789641.0464468-UTR-P-littoralis_Contig139:229509..230632Pylaiella littoralis U1_48UTRP-littoralis_Contig139 229510..230632 -
1680789641.1568017-UTR-P-littoralis_Contig139:239030..2392361680789641.1568017-UTR-P-littoralis_Contig139:239030..239236Pylaiella littoralis U1_48UTRP-littoralis_Contig139 239031..239236 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789641.0560408-CDS-P-littoralis_Contig139:230632..2307561680789641.0560408-CDS-P-littoralis_Contig139:230632..230756Pylaiella littoralis U1_48CDSP-littoralis_Contig139 230633..230756 -
1680789641.0687242-CDS-P-littoralis_Contig139:230963..2311241680789641.0687242-CDS-P-littoralis_Contig139:230963..231124Pylaiella littoralis U1_48CDSP-littoralis_Contig139 230964..231124 -
1680789641.0769992-CDS-P-littoralis_Contig139:231785..2319191680789641.0769992-CDS-P-littoralis_Contig139:231785..231919Pylaiella littoralis U1_48CDSP-littoralis_Contig139 231786..231919 -
1680789641.0856602-CDS-P-littoralis_Contig139:232525..2326251680789641.0856602-CDS-P-littoralis_Contig139:232525..232625Pylaiella littoralis U1_48CDSP-littoralis_Contig139 232526..232625 -
1680789641.0975363-CDS-P-littoralis_Contig139:233342..2334681680789641.0975363-CDS-P-littoralis_Contig139:233342..233468Pylaiella littoralis U1_48CDSP-littoralis_Contig139 233343..233468 -
1680789641.107972-CDS-P-littoralis_Contig139:234253..2343521680789641.107972-CDS-P-littoralis_Contig139:234253..234352Pylaiella littoralis U1_48CDSP-littoralis_Contig139 234254..234352 -
1680789641.1187596-CDS-P-littoralis_Contig139:235331..2355011680789641.1187596-CDS-P-littoralis_Contig139:235331..235501Pylaiella littoralis U1_48CDSP-littoralis_Contig139 235332..235501 -
1680789641.129384-CDS-P-littoralis_Contig139:236072..2362521680789641.129384-CDS-P-littoralis_Contig139:236072..236252Pylaiella littoralis U1_48CDSP-littoralis_Contig139 236073..236252 -
1680789641.1380239-CDS-P-littoralis_Contig139:237190..2373711680789641.1380239-CDS-P-littoralis_Contig139:237190..237371Pylaiella littoralis U1_48CDSP-littoralis_Contig139 237191..237371 -
1680789641.1472042-CDS-P-littoralis_Contig139:238898..2390301680789641.1472042-CDS-P-littoralis_Contig139:238898..239030Pylaiella littoralis U1_48CDSP-littoralis_Contig139 238899..239030 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig139.56.1

>prot_P-littoralis_Contig139.56.1 ID=prot_P-littoralis_Contig139.56.1|Name=mRNA_P-littoralis_Contig139.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=469bp
MAGGMRRRDTAAAAAVGVAALALSGSSTVNAFIAVTSKGGLRSTAPRMLA
TRQLQMMAGGPRGRSGGGVSIEGADGARVILASAMPIDSIRQRINVDGDE
YGDGEMMEGAPAAASTSMQQEEYQGFTGAPKRQTNQIVDPNSREATLSRK
NNLLFSGLVLATISAGVWVAGNAFVDRQTQLVEAFADEMTYHIGDDREME
LCVKEYKGKLGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKL
NAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKK
NVQASFAANGAEMLRIRIRNMAESALKAAIEAVPEGQLLESGWEELGMDD
QWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADM
EAKKTEPKDEKEPEKEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPE
CGAGKNKFTEADMDDDLL*
back to top

mRNA from alignment at P-littoralis_Contig139:229510..239236-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig139.56.1 ID=mRNA_P-littoralis_Contig139.56.1|Name=mRNA_P-littoralis_Contig139.56.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9727bp|location=Sequence derived from alignment at P-littoralis_Contig139:229510..239236- (Pylaiella littoralis U1_48)
CTGGGACGTCTCCCTCTACCTGTACTAATCGCAGGCTCGACTTCGCCGAC CAGCCCAGCATCGCTCCATCCTCTCCATCGCTTGGGTGTTGGGCTGATCA GGTTTCAAACGAGAGTTGACCCCGGCTAGCTTACTTAGTATCGGCTGCTT TCACTCGGCGGTTCGGGAAAAGGAGGGCCGTCCACGTGTGGTTGATCCTA AAAATCATGGCTGGTGGCATGAGACGACGGGATACTGCTGCTGCTGCTGC TGTTGGTGTGGCGGCTCTAGCGCTGTCCGGAAGCAGCACAGTGAATGCCT TCATTGCAGTTACCTCTAAAGGAGGGCTTCGATCAACCGTGAGCGTGTTG TGCAAGCAAGTAGCGGTTGATTGGTGTATTTCCAAATGCACATACATGAA TTCAGTTACAGTGTACCTCGTTCAACTCAACGGCCTATCGTACGGATCAT GTGCAAGTATGGAGAGGAAGAGGACAACAGTACCAGCAGGGCAGGAGAGA AGCGGCAGGCCGAGCTTGGTAAAGGATATACATGGCCGAATGTGGCACAA GTAGTGGCATCATAGTTCGTGAGAAGCAGAGGCCACATTTGCCTTGTTTG CGATTTCAGTTATTTTTCTCATCTGTTGTTGTCGCTGCTCTGCTCTCATT CAGCATGCAAAGTTTGGGTACAACACACCTTTCCACTCGTATGAATATGA TATCATACAAGTATCCTGTTCGAGTACAGGGCAGAATGCGAGCTATCAGA AGGGCGGCCAGGCACAGAGCTTGTCCACTGAGTGCTGTCCACTGAGTGCT GTAGCAGGGACGCAAGGATACAAACCGCTGCTGCCGCACATAGTGCTGCT GTATCATAGCAAACATTGTTTACATGGTCATTTTAGGTGCTGCCTTAAAC ACGAAGTGCAGCCGTTGCATCTTCAGCTCCAAGCAAAGTGGAGTGCTGCT GTGTGCGTGCTCTACGCTTGGTGTTGGTGATGCAACTTTTACACGTAAGG TTATCATGCATGTCACCCACACACGTGCCGATCGCTTTGGATAACATCTC ATCACAGCAGTAGAAGGAGGCCGCGGCACAGGACAGAACTACGGGAACCA CGCAACTGCTGCAGTGAGAACACCATCCCCGCGTGCGCCTTATTTCGCTC GCTCCACCTTGCTGCTGACCTTCCTTCAAATTCTGTTGTGACTACAGCGC AGCAGCATTGTGGTGTACAGGAGTAGCACGACTCTGGAAAGGTTTTGTTC TGTTCCGTTTGCGTATTTTATCCCATTTCAGACTTCGAAGTATTATATTT CATCCTATCACGATATCGCGTTTGTTTGTAACCACCGGCTAGGTTTTGGG GGCGGGCCTATGTGAGAATGGACAGCAACAAAAGCAACACCACCACCACC ACCACCACCACCACCAACAACAACAACCTTGTGTGTGAAAAATGACACGA GCAATCGCACTTTCATGTTGACAGGCTTGCACGAAAACCCAGCGTCCGAG GTGGCAACGAACTGAAGTGAAAGTAACCTACTGGAAACAACGACTCGCAT CACATCGTACACTCTGTAACAGCGACAGCCTTTGTTGGTCTGCACGTGAT CATATTGTTACTCTTGATCTTTGATTGAATATCACGGCAAAGCCGTTTCA AAATGCGGTTCGAGAGTGTGTTTCGTGCCTTCTGTTTTTTAAGACTTGCC CCTGACGCTGGACGGTGGAACATGCCTCGCTACGTACATGCCCACCTACC TACCTTTCCTTAGTGCAGACATGCAGGCAGACGGATCACACACTATAGTT CGGTCAACTCTTACGCTTCGCCCGCCCGTCAACTTACGCCAACTCGACCC AACTCAACACAAAAGGCGCCGAGAATGCTCGCGACTCGCCAGCTGCAAAT GATGGCCGGGGGGCCGCGAGGGCGATCTGGCGGGGGCGTAAGCATCGAGG GGGCGGACGGTGCCAGGGTGATCCTGGCCTCGGCGATGCCCATTGATAGC ATTCGGCAGCGAATCAACGTGGATGGCGACGAGTACGGGGACGGCGGTAA GCCTCCCCCTTCCCCCCGATAGTGCTTGCTATTTGTTCCGGGGGCTTACG TTATGATAAATAGTCTAAGGGGGGCTTAAAATAGGAAACATGATGTTCGT GATTCTCATTATCAGCGCGTGAGATATTTTCACGGTGATGATTGTTCATC TCACAGCAGTTCTTAGGCCATAGCTGCGCTGAGTGACCGCAGAATACTGT TTTATCTGGATTTCCTGGATGAGAAGCACGCGAGGGAATCTTCGTACTGC AGTCGTGGGTTGTCTCTTCCAGCAAGGGTAATAAAAAAGAAAAGCGTTGC TATTTGCTCTGCTGGAAGCTGCGGATGCTTTGGTGATTGTCGGGTTTCGG TCAACATGTATTGTACTCTGTATTCGGAGACGCACTATAGGCTAGTGTAG ACTTCGTGTAGACGTTTCATCGCAGATCACGAACACCGCACCTGCTGTTG AGTTCATTTCACTCCTTTCCCGCCCCCTCAACAGCGGGCACATGCAGGGG GGAATAGTTGAAGGCGCGATGGCCGAAATCAGAAGTATAGCAAGGCGAAA AAACGTCTTGTAATTTGTCGTTGTTGCTTCTCATACGAGCCTAATCCCAG GAGTACGATAGCTCCACCACATTGGAGTGCCCTAAAGCAGTAGTCGTGCT GGCGTTCCCACCCTTGCACAAAAGTCGGCAGTTCATGGACCGGTGCATGG CAACAGAAATACGCAATTGCGCGGTCTACGTGCTGCCCCCCCCTCGACGG GCTCATTCCTTTTTCACACGAAAATACGCTTCCACGGATCGGGGGTGAGC TCCCCGGAGGATGGGCAGCGAGTAGACCCTGCAAATACTCAATCACAATA TCAGATTTTCCTTTTCTTAGCCCGCAACCGACCTGACCCGCTCCCCATCC CCCACCCTCCCCGAAACAAACACGACATCGGCAGAGATGATGGAAGGTGC GCCGGCAGCCGCGTCCACAAGTATGCAGCAAGAGGAGTACCAGGGCTTCA CGGGAGCGCCCAAGCGGCAGACAAATCAGATCGTGGACCCCAACAGCCGG GAAGCCACGCTGAGCAGGAAGAACAATTTGCTCTTTTCTGGCCTCGTCCT GGCTACCATCTCAGGTGAACACACGCACGAAAAAGAAAAGTAGACACCAA AAAAAAACAAAAACGGTCCCTGGGGAGAAAAAAATCGATCGATGGAGTGG TTAGATTCGTCTCGGTTTGGTTCGGTTAGCACTTGACGCTCCGTATTTTT TTGTCCATTTTTGCCCTCTATTCTCCCCCTCGATTTCACGGGGGCCGCAA GGCGTTACTGGCGAGGACCCACACATGGTGGCGGTGCTGGGGACCGTGTC GGCTACCGATTCGGTGTGCCGATTCTCGGCACACTCACTGCACCGTACAA GAAACGAACAGTCTTGCCGGATGTCGAATCATGCAATCAGCCGCCGCCTT GTCCAGAGTGCTTTTCTATTGATCCACGATACTCAAAGCGTGGAGCTACA ATGCAAAATTGACAAAATTCTTGCTGCTGTGCGTGTGTTGTTGCACGCCG ATACTAGGGCCTTGTCTTATTCCTTCTCCCTGCCCCCCCATCGCCCCCCC CTCCCCCGTGCCATTTTTCTCTCTGGCGCCCGTCGATGTTACTCATTTTA TACTTGGTGATATTTTAAAATGTTACATCACGTAGCTGGGGTGTGGGTAG CTGGAAATGCTTTCGTCGACCGGCAGACGCAACTGGTAGAGGCATTTGCG GACGAGATGACGTACCACATCGGTGACGACAGGGAGATGGAGCTCTGCGT CAAGGAGTACAAGGGGAAGCTCGGCCCAAAGCTGTACCGAGAGGCCATGT TCAAGGTGACTCGCGACGGCCTCATTTGGGTGCAACGGGGTTGGTTGCTT AGGGTTTGATTGGGTTGGACTTTAATTGGTTTGGTTGGGTTTGGTTCGGC GGAAACAGTAAGAGGAATGCCTGATCCACGCAGGTACGGACGTTGTCTTT GTTTATTGGCGCGAGGACGCGTCAAGAAGTGCAATGGAAAGCACAGCTGA AGCGCTATACCGTGCATGTTTTTCGGGGTGAAAGGGAGGATGGTGTGCGT AGCAACGTACGAACCGAGGAAAGCGTCTCGTACATCTCATGCTGCTGCCA ATAAACCCACCATCCTCCGTATTTACCGTCACACTGACGGGGCAGTGCAG TTCCCGGTGTCGAGAGGTCGCCTACTTTTTCGGCAGGGAATGTGCGAGCG TGGTAAACATCAGTGCGTCCGGTCTCTTGAGCAGTGGGTGTGAAACGTAT GTCACATGACGTTTCCTCTTTTAGACGTATCTCGACTTTGGTCCCAGAGA GAGAAGCATGGCGTGTGGAGTAACAGCACACCAGCAAATATGGCACTGCG CACGACAAGAGCACAGCTCGGATCGCTGCTAGCGTTACTTTGTCAAGCGC GCAATCGTGTCATCCATCCGCATCAGGGAGATGCGGGGAGGCATTTGTCC GTCCAGTGTCTTGAGGCCAAGCTTTACCCCCGAACGGCCCCGGCAAATGG TCCCAAACCTCGCTGTTGCACCCCATGGATTGTTGAAATCGACAACAACG AACCTCCTGTCACACTGCTGTTCTCACGTTTAGTCGTTTTCAAGAAACGC TTGAAATCAAAGTTTGAGAGCAGTGCGGTCATGTGTTAACCTCTCCGCTC CTTTCCTAGAGTCCACCCACCAACTTGGGGTGTTCGCAAGAGTTCTCGTC GTCATTCATGTTCTCCTTCTCTCCTGGGAAACCTAAACAAAACAACACTT GTTCGTTGTGCGTGTTTTGTTTTTGCGCTTGCAGGCGTGCATGATCTCCA TCGGGCAGAGGAAGGCGGTAACCCTCGAGACCGTGAGAGCTGTCAAGTGC ATCTTGAAGCTGTTCAAACTCAACGCGTTCAAGGTGAGAGACTGACTGCC ACCAAACAATCTTAATCTTAATGATGTGAAAGCTACACCACACAATACCC GTGGATAGTGACGTCAGCTGGTGACCCGTATGGAATGCCCATGACCCATA TGAGAACCTTCCGGGAACAGTCGGAGAGATCATCTCGCGTGCAATTTCAC ATTGCCCGGGAAGATCTCCCGTGCGTCCTGTTGCCCTTGTCTCTCTCCCG AGTTTACCGACGCTTTCTCGTACCTCCCTGCTGCCGTGAGAGGGTGAGCC CCGCGTGCGCTCCACGCAGCACACCTACCGAAGAGAAGCCGCCCGTAGCG CAGAACCTGGAACACATCCGTTCCATATCTGCCGTTAACGGCAGTTGATT ACTGCTTATTGAAAGCGCGCCATGCTGGCCTCCATCACCGTCGCGTGTGG GTAGATCTGCATATATATATATACATACACGTTTACGATGTCGGAGGAAG AAAAAAATCACTCGAGCAGTCTGCGCGCTTACGATGAGTAGGAGCAAGAC ATAAAAGTCATACGTATGTACGAGGACGTAAAAGGTTAGTAGTTTTGGTT TGAGAGAAGACAAAAGGACAAAAACACTAAAAGCTGCGGCACTTCAAGGA CGTGAAAGGCCGTCGATGGGCCGACAAAAAGTCACCATTGGAAGCATGGA TTGTGTATATTCATTTTTTGTGTATCGATATTGCTTGTCGACTCCCTCGT CTGCCTAGTCGGTACACGTATCATGTGATATCTACGAACGGGCCGGTGCG TGTTTGTCGGTTCAACAGGGGGTGAAGTTGATGGTGGCGGCGGCGCGCAC CACGGACAAGTCGCAGTCGAACGTCCGGTCGAAGTTGCTCTTCCTGGGAG GTCTGATCGCCAAGGGGGACGAAAAGGCTGAGCAGGCCCTGGAGGTGAGA GAGGGAGAGAGATCGAGAGAGACAGAAAGAGGCAGATGGGGGGGTCGGCA GATGGGACAAGGGTGAGAGAGGGGCAACAAAGAGTGGGAGAGAAGTATAC ATATATAGGGTACACCTATGATCGGGTAGAGTCATGGAGTGAGAGTGAGA TAATGAAGATAACGAGGGGGAACGGGGGAGAGAACAGGGGAAGGGGGGGC GAGCAGGGAGGAGGAGGGGCACGTGGAGAAGTAGCTACGCGACGGGCAAG GGAAAAGCCATGTTGTCCGAATAATTTCGAGTTTCATTTTTGACGTCTGT CCAGTCAGCGAAGTTGTGATTTTGGCGACAGCGGGTGAAACCGTCTCACA CCCCTCTGGTGATATCCTTATCCGTTATCCGTTTCGTGTATCGTATTGTC AGCTCTTGTGACGACCGTGCTCATTTCGTTTGTTGTCTTGGCAACTCTTG TTCTCTATTCTTGATTTTCTGTTGATTGTTTGATCCATTCAGCCGTTGAT GAATACTGCTGTGTCTTGTCATGCCAACTCTTTGTCGTCGTGTCAACTCC TGTTCCTACTCTTACTTTGCTGTTGCTTGTTTGATTCATGCATGTAGCCT TTGATGAAAATTGTGTCTTGTCAGCTCTTGATGCTGTATTCATTTCGTTT TGTCAGGTCAACTATTTTGTTCATTCTATTGGTTTCCTGTCGGTTGCTTT GATTCATGCAGCCTCTGAAGAAAAATGTGCAGGCGTCTTTCGCTGCGAAC GGCGCGGAGATGCTCAGGATCAGGATCAGGAACATGGCCGAGTCCGCGCT CAAGGCTGCAAGTGAGTCAAAACTCTACATTTTCGACTTCACAATCTGAA ACATGCCGGCGCGTCACTCTTAACAGCAACTGCTCTCCCGATACGAGATC GACCAGCGACAGCAACGGTAGTAGTGCCGGGGACGGATTTAAACCAATTT GAAATCGCCCGCTTGAATCTTTTGACACTCAGAGCTACATGTGCAATTAG CCACCTTGAGCAGACACGTTCACAGTGACCCACGCTCATCACCTCAACAC AAAACGTTTGGAGCCCGTTCCCCCTTCGTCGACTCATTTAGAGTCGCGTT GTCTTCCTTTGCTTTCGTTTTCACGTACCAGGTCTGATGCAAGCAGTGGC TAACACCATCAACACCGATAATCTCTGATGTACCCTGGCACCGACCTCGC GATGTCTGCACCTTTTTTCGACGTTCGCGGCAGTACGTCGAATCACACCG ACGGCGAGTCACGAAAAGACGACAAACGCACCTTGTCACCCTCTCAAAAC CCTGTGTTGTTTTTTGCCTTTTGCCCTCCTCTCGTCCTCGCTGTGCCTGC TTCGCTTGATTTCGAACAACCTAACATGTTGATTGCGGTTGCTTGGTGTG GCACGAAACGACAACAGTCGAGGCTGTACCGGAAGGGCAGTTGCTCGAGT CAGGCTGGGAAGAACTGGGCATGGACGACCAGTGGGCATCGAGGGTGGCG ATGGACGTGGTTGAAAACGAGGACCCTGCCGGAGGCTTGGACTTTTACAA GGTGTGCTTCGCGCAAGCAGACACAGCACCGTGCAGTGTACGATGGCGCA CGACATACCATCACACCACAACCTTGGGTCGTTCAGAGCTCGATAAATTT CTCCACAAGGAAAGAGCGACCCCGTACCAAACGGCACGTTTTGAAGTTTT GGGAACGCTCGAGAAGATCGTTTTCCAACACCACCCTCCAATCGGCACCG ACACCTTTTTTCGCTGTGAGGAAAAATATCACGTCGATCTTTTGAAAATC GACCCAGTGGGTGCCGAGTGTTGTGGAATCTTGTGAAGAATACGTTGACT GGTAAATTAGCTTGACCGGAGACATGAGGTCGATGAGATATCAAACCCGA TAGATACAATAAATGAAAGCCCTGTGCCGGAGTGCAGCTGGAGTAATGAA CTTGCCCCCCGAATCAAGGAATTGAGTGGAGAGGAGTGGGGTGCGCCATA TGATGGTAGTTGTGGCGCGTCTCAAGTCTTACTCCCGTGAATCCGCATGC GGTGACTTGTCGCTCTAGCGCCACACCCACGCTGTGACTGTCAGCTTTTG CCACAGCCGGTGGCATACGACCCTTGGCGCGACGTACCCGTTGTATCGAC ATTTACCGTTGGCATGGCATGGTATGACCGTTGACACGATATACACATGT GACCGTTGGCAGACTGGAGGGCCGGCGACAAACGACGCTGAGTCTGACCC CAAAGCGGCCAAGGCTCTTGCTGCAATGGAGGCAGACATGGAAGCGAAGA AGACAGAGCCGAAGGACGAGAAGGAGCCGGAGAAGGAAGGGGTGGCCAAG TCCTTCGAGTGCCAAGAGTGCGGGTGAGTTGATGTCTGTGGTATCCTGCC TGCTCCGAATGGATCAGAGATGTAAGGACGGGACAGAAGCGGAACAAGCA TTACAGGGGAATCGACACGAATGGATTTGAAGCGGAACAATGTGAGACGA CAAAATCGACACGCACCGATTCTAAAAGTTGGCTCTGATGAAAATCCTTC TCTTTTTTTTTCTTTCTCCCACCATCCTAGGTACAAGATGTTCGTGGCGA AGGGCCGAGAGTTCAAGTTCTTCGGAGACGGCTTTAAGTGCCCAGAGTGC GGAGCAGGGAAGAACAAGTTTACGGAGGCCGACATGGACGACGATTTGCT CTAGAAAATTGGGATTCAAATCCGCTTCCACGTGATGTGGTCTTTTATCT GATCTGGCTGTGGTTGCACATGGGTTTGTTTGCCAGGCACATTGGTCTTT GATGTAACGGAAGCGTTTTTTTTTTTTTTCGTTCGATTTAATACGATATG GTCTCGAGGGACTATTCCCTCAAGTCGTGGACGTGTACTCCACCATTTCT CGGCGTGGGTCTTATCCGACTGTTTGTGTGTGTTTTTTGTTCTGAATGGC ATCATATTTTCCTCGCTCCGTACGCCGAAATCGTGAAAGACAGATCATAT ACCACGTTCGTTGGCGCAGCACGCTAGTTTTTGAGGTGTTTGGTGCAACT CGGTAGGAAGGGTGGATGGTGCGATGCGGTGGAATGGAAAATGGAAGCGG AGCGGGCTACTGGTGTCTGTAGCCGCGGTCCTCAAAAACGAAGGCAGACG GGTACGTGTGACTTGACTAGAGCAAAGCGTGCGGTGGGCTCCGCAATAAT CAGTTTCAATAAACGAGATAGCGTACGAGATGACCTTGTTACTATGCTCC TGTTTCAAGCGCCGAGATGACCTTGTTACTATGCTCCTGTTTTCGAGCGC CGCCCACGGGAACCAAAGTTCGTCTAATCCACGTGCGAAGGATTGTGTGC CCTGTTCGGAAACGTTTATCGGAAACAAGCACGCGGAGACGAAATGACCA TGATTATGCACAAGCGGTGGTGACGGATACCAATCAGGTGATTTGTGGAT CCATTTTTTTTTTATGTTGGCACAAATCAGATATGAACGGTGTCGTGGGT GTACCGCGGTCGAGAGGCCCAGAAGCCTTTCCAGGCAACATTTTCAGAGC GGGGGTCTATCAGACTGCTGCTTGCCACATGGCGACAACCGGAGTTTTAT CGTGCGTTCAGCCAATCAACATTCGTCCTTAACTTTGGTGGAATTATTGG GTTTGGTCGATTTTCATTGGTTGCGGGTGGTATTGACTGACGCTTTCTCT TCAACGCGGTAAAATCCAGACATCGATCACAGTTGATCACGGCGCCCACG CCGAATATGAGACACGCCAATCCAGAGAGGCGGAGAGAAACACACAGCGC TATCACTGATGGTTTCTTTATCGTCAC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig139:229510..239236-

>mRNA_P-littoralis_Contig139.56.1 ID=mRNA_P-littoralis_Contig139.56.1|Name=mRNA_P-littoralis_Contig139.56.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1407bp|location=Sequence derived from alignment at P-littoralis_Contig139:229510..239236- (Pylaiella littoralis U1_48)
ATGGCTGGTGGCATGAGACGACGGGATACTGCTGCTGCTGCTGCTGTTGG
TGTGGCGGCTCTAGCGCTGTCCGGAAGCAGCACAGTGAATGCCTTCATTG
CAGTTACCTCTAAAGGAGGGCTTCGATCAACCGCGCCGAGAATGCTCGCG
ACTCGCCAGCTGCAAATGATGGCCGGGGGGCCGCGAGGGCGATCTGGCGG
GGGCGTAAGCATCGAGGGGGCGGACGGTGCCAGGGTGATCCTGGCCTCGG
CGATGCCCATTGATAGCATTCGGCAGCGAATCAACGTGGATGGCGACGAG
TACGGGGACGGCGAGATGATGGAAGGTGCGCCGGCAGCCGCGTCCACAAG
TATGCAGCAAGAGGAGTACCAGGGCTTCACGGGAGCGCCCAAGCGGCAGA
CAAATCAGATCGTGGACCCCAACAGCCGGGAAGCCACGCTGAGCAGGAAG
AACAATTTGCTCTTTTCTGGCCTCGTCCTGGCTACCATCTCAGCTGGGGT
GTGGGTAGCTGGAAATGCTTTCGTCGACCGGCAGACGCAACTGGTAGAGG
CATTTGCGGACGAGATGACGTACCACATCGGTGACGACAGGGAGATGGAG
CTCTGCGTCAAGGAGTACAAGGGGAAGCTCGGCCCAAAGCTGTACCGAGA
GGCCATGTTCAAGGCGTGCATGATCTCCATCGGGCAGAGGAAGGCGGTAA
CCCTCGAGACCGTGAGAGCTGTCAAGTGCATCTTGAAGCTGTTCAAACTC
AACGCGTTCAAGGGGGTGAAGTTGATGGTGGCGGCGGCGCGCACCACGGA
CAAGTCGCAGTCGAACGTCCGGTCGAAGTTGCTCTTCCTGGGAGGTCTGA
TCGCCAAGGGGGACGAAAAGGCTGAGCAGGCCCTGGAGCCTCTGAAGAAA
AATGTGCAGGCGTCTTTCGCTGCGAACGGCGCGGAGATGCTCAGGATCAG
GATCAGGAACATGGCCGAGTCCGCGCTCAAGGCTGCAATCGAGGCTGTAC
CGGAAGGGCAGTTGCTCGAGTCAGGCTGGGAAGAACTGGGCATGGACGAC
CAGTGGGCATCGAGGGTGGCGATGGACGTGGTTGAAAACGAGGACCCTGC
CGGAGGCTTGGACTTTTACAAGACTGGAGGGCCGGCGACAAACGACGCTG
AGTCTGACCCCAAAGCGGCCAAGGCTCTTGCTGCAATGGAGGCAGACATG
GAAGCGAAGAAGACAGAGCCGAAGGACGAGAAGGAGCCGGAGAAGGAAGG
GGTGGCCAAGTCCTTCGAGTGCCAAGAGTGCGGGTACAAGATGTTCGTGG
CGAAGGGCCGAGAGTTCAAGTTCTTCGGAGACGGCTTTAAGTGCCCAGAG
TGCGGAGCAGGGAAGAACAAGTTTACGGAGGCCGACATGGACGACGATTT
GCTCTAG
back to top