mRNA_P-littoralis_Contig1384.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1384.1.1
Unique NamemRNA_P-littoralis_Contig1384.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Match: D7G2I4_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2I4_ECTSI)

HSP 1 Score: 552 bits (1422), Expect = 3.410e-184
Identity = 273/315 (86.67%), Postives = 285/315 (90.48%), Query Frame = 2 
Query:   35 TYYCKDRKENQYGPFPAKQLVEAHNAGYINDRKVLVKEARMKGEFRRMGARALMHGPSSDEDFKALNVWPQVDAHHPLADKILSPGDSSSKDFRRWSFNIFDLETQELGMLAATILAETGLPRVFGISMKTFAHFMSAVGFFMGRNPRVHYHNLYHAVDVMHATYLTLEGMGASGLLTETEQLALILSALCHDLDHPGLTNSFQTATESPLANLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQKARIREVMIQGILATEMSEHGTHIAKVDKLTNDFPNITLRVARWASGKTSAGD--LTPSLLLYPFRP 973
            T+YCKDRKENQYGPFPAKQLVEAHNAGYINDRKVLVKEARMKGEFR MGARALMHGPSSDE FK+L +WPQVDAHHPLAD+ILSP D SS DFR W FNIF L+ QELGMLAAT+LAETGLPR FGISMKTFAHFMSAVGFFMGRNPRV YHNLYHAVDVMHATYLTL+GMGASGLLT TEQLALILSALCHDLDHPGLTNSFQ ATESPLA+LYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQ+ RIREVMIQGILATEMSEHGTHI+KVDKLTNDFP+ITLRV  WASG    G     P  LL P +P
Sbjct:  105 TFYCKDRKENQYGPFPAKQLVEAHNAGYINDRKVLVKEARMKGEFRPMGARALMHGPSSDEAFKSLTMWPQVDAHHPLADRILSPSDGSSHDFREWGFNIFGLDKQELGMLAATVLAETGLPRTFGISMKTFAHFMSAVGFFMGRNPRVSYHNLYHAVDVMHATYLTLDGMGASGLLTVTEQLALILSALCHDLDHPGLTNSFQMATESPLASLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQRTRIREVMIQGILATEMSEHGTHISKVDKLTNDFPSITLRVGGWASGDIGRGTDRSNPGPLLSPPQP 419
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BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Match: A0A7S2RZ61_9STRA (Phosphodiesterase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ61_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.990e-31
Identity = 73/190 (38.42%), Postives = 110/190 (57.89%), Query Frame = 2 
Query:  275 KILSPGDSSSKDFRRWSFNIFDLETQELGMLAATILAETGLPRVFGISMKTFAHFMSAVGFFMG--RNPRVHYHNLYHAVDVMHATYLTLEGMGASGLLTETEQLALILSALCHDLDHPGLTNSFQTATESPLANLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQKARIREVMIQGILATEMSEH 838
            + LSP    +K+F  W+F+++    +EL +L A +   +GL   F +   T   F++ V   M    NP   YHN +HA DV HA ++    MG S  LT  E   L+++ LCHDL+HPG  N++Q    + LA  YNDQ+PLE+HH A+ ++ILR   CDI   L++PQ   +R+  I  ++AT+M+ H
Sbjct:  324 EALSP---EAKNFNTWNFDLWKTPVEELDVLVAIMFMNSGLFDSFDVDGPTLKRFLNRVDVAMSLHNNP---YHNRFHAFDVCHACFVFCSDMGCSDYLTGLEVFTLLVAGLCHDLEHPGTNNAYQINAMTDLALRYNDQSPLENHHCAVAWEILRDPACDIFSQLDEPQLRTVRKNFITCVMATDMTCH 507
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BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Match: A0A7S3TXH7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TXH7_9SPIT)

HSP 1 Score: 133 bits (335), Expect = 2.600e-30
Identity = 84/226 (37.17%), Postives = 116/226 (51.33%), Query Frame = 2 
Query:  263 PLADKILS--PGDSSSKDFRRWSFNIFDLETQELGMLAATILAETGLPRVFGISMKTFAHFMSAVGFFMGRNPRVHYHNLYHAVDVMHATYLTLEG--------------------------------MGASGLLTETEQLALILSALCHDLDHPGLTNSFQTATESPLANLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQKARIREVMIQGILATEMSEH 838
            PL+ + L   P      D RRW+ N++    +EL  +AA IL + G+   F IS      F+S V      NP   YHN  HAV VMHA+Y+ L G                                  A G LT+ ++LAL+L+ALCHDLDHPG++N+F   T+S LA LYND++ LE+HH A  F +L R G  +L HL   +   +R +M + IL T+M+ H
Sbjct:   34 PLSSEELGRLPAQLEPADLRRWNLNVWCFSQRELIQIAAGILEDAGVVHPFKISPNALVSFLSDVAANYHPNP---YHNFAHAVTVMHASYILLRGGHVPILPDGAVPPDARFVDVKLEDDTADARGDKPAPGELTKLQELALLLAALCHDLDHPGVSNAFLVNTDSHLAILYNDESVLENHHAATTFVLLHRHG--LLTHLSNEEYRELRRLMCKTILGTDMASH 254
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BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Match: A0A0G4IWG7_PLABS (Phosphodiesterase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IWG7_PLABS)

HSP 1 Score: 138 bits (348), Expect = 3.970e-30
Identity = 78/220 (35.45%), Postives = 120/220 (54.55%), Query Frame = 2 
Query:  299 SSKDFRRWSFNIFDLETQELGMLAATILAETGLPRVFGISMKTFAHFMSAVGFFMGRNPRVHYHNLYHAVDVMHATYLTLEGMGASGLLTETEQLALILSALCHDLDHPGLTNSFQTATESPLANLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQKARIREVMIQGILATEMSEHGTHIAKVDKLTNDFPNITLRVARWAS---GKTSAGDLTPS 949
            SS+   +W F+IF  E  +L  + A +         F +  K  + F+S V      NP   YHNL+H+VD        L+   A+  LT  E  AL+++A CHD+ HPGL+N++Q    + LA LYNDQ+ LEHHH A+ F IL+R GC+IL  L +P+    R+++I  IL+T+M+ H +       L+  F N+ LR +  ++   G+     ++PS
Sbjct: 2001 SSETLFQWDFDIFSYEKSQLSGVIARLFEGMDFVNTFHVDPKALSSFVSTVSESYLDNP---YHNLFHSVDTSQTVCCLLKTFHANAYLTSLEMFALLIAAACHDVGHPGLSNTYQVNASTKLALLYNDQSVLEHHHCAMTFHILKRPGCNILSGLTEPEYRSARKIIISSILSTDMTCHFS-------LSEKFSNLLLRRSEDSARSGGRAGRDTISPS 2210
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BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Match: A0A6P8SPM3_GYMAC (3',5'-cyclic-AMP phosphodiesterase n=1 Tax=Gymnodraco acuticeps TaxID=8218 RepID=A0A6P8SPM3_GYMAC)

HSP 1 Score: 132 bits (333), Expect = 6.890e-30
Identity = 74/188 (39.36%), Postives = 111/188 (59.04%), Query Frame = 2 
Query:  305 KDFRRWSFNIFDL----ETQELGMLAATILAETGLPRVFGISMKTFAHF-MSAVGFFMGRNPRVHYHNLYHAVDVMHATYLTLEGMGASGLLTETEQLALILSALCHDLDHPGLTNSFQTATESPLANLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQKARIREVMIQGILATEMSEHGTHIA 853
            +D  +WSFNIF L      + L  +  TI  E  L + F I + TF  + M+    + G  P   YHN  HA DV  +T++ L       + T+ E LA + +A  HD+DHPG++N F   T S LA +YND++ LE+HHLA+ F++L +E CDI  +L K Q+  +R+++I  +LAT+MS+H T +A
Sbjct:   92 EDLDKWSFNIFSLAEFSNNRPLSCIMYTIFQERELLKTFRIPVDTFVTYVMTLEDHYHGNIP---YHNSLHAADVTQSTHVLLSTPALDAVFTDLEILAALFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLHQEHCDIFQNLNKRQRQSLRKLVIDLVLATDMSKHMTLLA 276
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BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Match: A0A250XHK4_9CHLO (Phosphodiesterase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XHK4_9CHLO)

HSP 1 Score: 137 bits (344), Expect = 8.330e-30
Identity = 66/173 (38.15%), Postives = 105/173 (60.69%), Query Frame = 2 
Query:  320 WSFNIFDLETQELGMLAATILAETGLPRVFGISMKTFAHFMSAVGFFMGRNPRVHYHNLYHAVDVMHATYLTLEGMGASGLLTETEQLALILSALCHDLDHPGLTNSFQTATESPLANLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQKARIREVMIQGILATEMSEH 838
            W ++   + T+++  +   +   +GL   F + +  F +F+SAV       P   YHN  H   V+H T++ L+   A  +L+  +QLAL+L+ALCHDLDH G +NS+    ++ LA LYND + +E+HH A+MF+ILRR+ C +L  L+K  + R+R+ +I  IL T+MS H
Sbjct:  753 WDYDFTQVSTEDMNKICYDLFVTSGLLDHFKLDVHVFGNFLSAVSALYRSVP---YHNFNHVCHVLHTTWMILQTDTAKSILSMEDQLALLLAALCHDLDHDGHSNSYHVHVQTELARLYNDSSVMENHHCALMFEILRRKDCALLDDLDKDVRKRLRKTIISAILCTDMSNH 922
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BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Match: Q684M5_PIG (Phosphodiesterase n=2 Tax=Sus scrofa TaxID=9823 RepID=Q684M5_PIG)

HSP 1 Score: 134 bits (336), Expect = 2.860e-29
Identity = 78/229 (34.06%), Postives = 124/229 (54.15%), Query Frame = 2 
Query:  179 GARALMHGPSSDEDFKALNVWPQVDAHHPLADKILSPGDSSSKDFRRWSFNIFDLET----QELGMLAATILAETGLPRVFGISMKTFAHFMSAVGFFMGRNPRVHYHNLYHAVDVMHATYLTLEGMGASGLLTETEQLALILSALCHDLDHPGLTNSFQTATESPLANLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQKARIREVMIQGILATEMSEHGTHIA 853
            G + LMH  S +ED        + D    LA ++        ++  +W  NIF +      + L  +  TI  E  L + F I + T   +M  +      +P V YHN  HA DV+ +T++ L       + T+ E LA + +A  HD+DHPG++N F   T S LA +YND++ LE+HHLA+ F++L+ + CDI  +L K Q+  +R+++I  +LAT+MS+H T +A
Sbjct:   98 GVKKLMHSSSLNEDSSIPRFGVKTDQEELLAQEL--------ENLNKWGLNIFCVSDYAGGRSLSCIMYTIFQERDLLKKFRIPVDTMVTYMLTLEDHY--HPDVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAALFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEDNCDIFQNLSKRQRQSLRKMVIDMVLATDMSKHMTLLA 316
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BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Match: UPI00097DDDA1 (cAMP-specific 3',5'-cyclic phosphodiesterase 4D-like n=1 Tax=Paralichthys olivaceus TaxID=8255 RepID=UPI00097DDDA1)

HSP 1 Score: 133 bits (335), Expect = 3.460e-29
Identity = 73/187 (39.04%), Postives = 111/187 (59.36%), Query Frame = 2 
Query:  305 KDFRRWSFNIFDL----ETQELGMLAATILAETGLPRVFGISMKTFAHFMSAVGFFMGRNPRVHYHNLYHAVDVMHATYLTLEGMGASGLLTETEQLALILSALCHDLDHPGLTNSFQTATESPLANLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQKARIREVMIQGILATEMSEHGTHIA 853
            +D  +WSFNIF +      + LG +  TI  E  L + F I + TF  ++  +      N  V YHN  HA DV  +T++ L       + T+ E LA + +A  HD+DHPG++N F   T S LA +YND++ LE+HHLA+ F++L +E CDI  +L K Q+  +R+++I  +LAT+MS+H T +A
Sbjct:   84 EDLDKWSFNIFRVAEFSSNRPLGCIMYTIFQERELLKTFRIPVDTFVTYVMTLEDHYHGN--VAYHNSLHAADVTQSTHVLLSTPALDAVFTDLEVLAALFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLHQENCDIFQNLTKRQRQSLRKLVIDMVLATDMSKHMTLLA 268
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BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Match: F1S583_PIG (Phosphodiesterase n=1 Tax=Sus scrofa TaxID=9823 RepID=F1S583_PIG)

HSP 1 Score: 134 bits (336), Expect = 3.960e-29
Identity = 78/229 (34.06%), Postives = 124/229 (54.15%), Query Frame = 2 
Query:  179 GARALMHGPSSDEDFKALNVWPQVDAHHPLADKILSPGDSSSKDFRRWSFNIFDLET----QELGMLAATILAETGLPRVFGISMKTFAHFMSAVGFFMGRNPRVHYHNLYHAVDVMHATYLTLEGMGASGLLTETEQLALILSALCHDLDHPGLTNSFQTATESPLANLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQKARIREVMIQGILATEMSEHGTHIA 853
            G + LMH  S +ED        + D    LA ++        ++  +W  NIF +      + L  +  TI  E  L + F I + T   +M  +      +P V YHN  HA DV+ +T++ L       + T+ E LA + +A  HD+DHPG++N F   T S LA +YND++ LE+HHLA+ F++L+ + CDI  +L K Q+  +R+++I  +LAT+MS+H T +A
Sbjct:  157 GVKKLMHSSSLNEDSSIPRFGVKTDQEELLAQEL--------ENLNKWGLNIFCVSDYAGGRSLSCIMYTIFQERDLLKKFRIPVDTMVTYMLTLEDHY--HPDVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAALFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEDNCDIFQNLSKRQRQSLRKMVIDMVLATDMSKHMTLLA 375
[Close]
BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Match: A0A6P6PIV5_CARAU (Phosphodiesterase n=14 Tax=Neopterygii TaxID=41665 RepID=A0A6P6PIV5_CARAU)

HSP 1 Score: 132 bits (331), Expect = 4.440e-29
Identity = 85/273 (31.14%), Postives = 137/273 (50.18%), Query Frame = 2 
Query:   53 RKENQYGPFPAKQLVEAHNAGYINDRKVLVKEARMKGEFRRM--GARALMHGPSSDEDFKALNVWPQVDAHHPLADKILSPGDSSSKDFRRWSFNIFDLE----TQELGMLAATILAETGLPRVFGISMKTFAHFMSAVGFFMGRNPRVHYHNLYHAVDVMHATYLTLEGMGASGLLTETEQLALILSALCHDLDHPGLTNSFQTATESPLANLYNDQAPLEHHHLAIMFQILRREGCDILGHLEKPQKARIREVMIQGILATEMSEHGTHIA 853
            R  NQ   F +   +E  N   I    +  +E + K +      G + + HGPS +       V  + D    L+ ++        +D  +W  NIF +      + L  +   I  E  L + F I   TF  +M  +     ++  V YHN  HA DV  +T++ L       + T+ E LA I +A  HD+DHPG++N F   T S LA +YND++ LE+HHLA+ F++L+ + CDI  +L K Q+  +R+++I  +LAT+MS+H + +A
Sbjct:   33 RSGNQVSEFISNTFLEKQNDVEIPSPTLKAREKKKKQQLMTQISGVKKVSHGPSLNSGIARFGV--KTDKEDLLSKEL--------EDLNKWGLNIFTVSEYSHNRPLTCIMYAIFQERDLLKTFKIPADTFVMYMMTLEDHYHQD--VAYHNSLHAADVAQSTHILLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEDNCDIFQNLTKKQRQSLRKMVIDMVLATDMSKHMSLLA 293
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1384.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2I4_ECTSI3.410e-18486.67Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S2RZ61_9STRA3.990e-3138.42Phosphodiesterase (Fragment) n=1 Tax=Rhizochromuli... [more]
A0A7S3TXH7_9SPIT2.600e-3037.17Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A0G4IWG7_PLABS3.970e-3035.45Phosphodiesterase n=1 Tax=Plasmodiophora brassicae... [more]
A0A6P8SPM3_GYMAC6.890e-3039.363',5'-cyclic-AMP phosphodiesterase n=1 Tax=Gymnodr... [more]
A0A250XHK4_9CHLO8.330e-3038.15Phosphodiesterase n=1 Tax=Chlamydomonas eustigma T... [more]
Q684M5_PIG2.860e-2934.06Phosphodiesterase n=2 Tax=Sus scrofa TaxID=9823 Re... [more]
UPI00097DDDA13.460e-2939.04cAMP-specific 3',5'-cyclic phosphodiesterase 4D-li... [more]
F1S583_PIG3.960e-2934.06Phosphodiesterase n=1 Tax=Sus scrofa TaxID=9823 Re... [more]
A0A6P6PIV5_CARAU4.440e-2931.14Phosphodiesterase n=14 Tax=Neopterygii TaxID=41665... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1384contigP-littoralis_Contig1384:124..6422 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size1939
Hectar predicted targeting categoryother localisation
Exons8
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-12_001750.2
Cds size1155
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1384.1.1prot_P-littoralis_Contig1384.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1384 124..4672 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789639.4318984-CDS-P-littoralis_Contig1384:123..1721680789639.4318984-CDS-P-littoralis_Contig1384:123..172Pylaiella littoralis U1_48CDSP-littoralis_Contig1384 124..172 +
1680789639.442245-CDS-P-littoralis_Contig1384:709..8391680789639.442245-CDS-P-littoralis_Contig1384:709..839Pylaiella littoralis U1_48CDSP-littoralis_Contig1384 710..839 +
1680789639.451735-CDS-P-littoralis_Contig1384:1566..18111680789639.451735-CDS-P-littoralis_Contig1384:1566..1811Pylaiella littoralis U1_48CDSP-littoralis_Contig1384 1567..1811 +
1680789639.4635763-CDS-P-littoralis_Contig1384:2789..30111680789639.4635763-CDS-P-littoralis_Contig1384:2789..3011Pylaiella littoralis U1_48CDSP-littoralis_Contig1384 2790..3011 +
1680789639.4790525-CDS-P-littoralis_Contig1384:3512..36471680789639.4790525-CDS-P-littoralis_Contig1384:3512..3647Pylaiella littoralis U1_48CDSP-littoralis_Contig1384 3513..3647 +
1680789639.4876547-CDS-P-littoralis_Contig1384:4298..46721680789639.4876547-CDS-P-littoralis_Contig1384:4298..4672Pylaiella littoralis U1_48CDSP-littoralis_Contig1384 4299..4672 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789639.4958158-UTR-P-littoralis_Contig1384:4672..47521680789639.4958158-UTR-P-littoralis_Contig1384:4672..4752Pylaiella littoralis U1_48UTRP-littoralis_Contig1384 4673..4752 +
1680789639.5083008-UTR-P-littoralis_Contig1384:5254..54061680789639.5083008-UTR-P-littoralis_Contig1384:5254..5406Pylaiella littoralis U1_48UTRP-littoralis_Contig1384 5255..5406 +
1680789639.5164611-UTR-P-littoralis_Contig1384:5871..64221680789639.5164611-UTR-P-littoralis_Contig1384:5871..6422Pylaiella littoralis U1_48UTRP-littoralis_Contig1384 5872..6422 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1384.1.1

>prot_P-littoralis_Contig1384.1.1 ID=prot_P-littoralis_Contig1384.1.1|Name=mRNA_P-littoralis_Contig1384.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=385bp
AVISTSTSWTPHLLLQGPQRKPVRAIPGETAGGGAQRWVHQRQEGLGQGG
EDEGRVPPHGCPRFDARAFQRRGLQGAQRVAAGGRASPPRRQDTVSRRQL
LQGLPAVELQHFRPGDAGAGDAGGHDPGRDGPAPRVRDQHEDVRALHVGG
GILHGEEPSRPLPQPLPRGGRHARHVPHSGRHGGLGAPDGDRAARPHIVG
TVPRPRPPRAHQLVPDGNREPPGQPLQRPGSLGTPPLGHHVPDSEERRVR
HPGTPRETAEGSHSRGDDPGDPGDGDVRARDAHRQGGQAHQRLPEYHAQG
GQVGFGEDLGRRPNPVSSSLPFSSPRLPPMPPTRGNPSLAAVVDVGVQQG
GRARSRCPARQRPPWGWRTATGSQSPALCCTRPT*
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mRNA from alignment at P-littoralis_Contig1384:124..6422+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1384.1.1 ID=mRNA_P-littoralis_Contig1384.1.1|Name=mRNA_P-littoralis_Contig1384.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6299bp|location=Sequence derived from alignment at P-littoralis_Contig1384:124..6422+ (Pylaiella littoralis U1_48)
GCGGTGATCTCGACCTCGACCAGCTGGACGCCCCACCTACTACTGCAAGG
TGAGAAACAACCAAGCGTGTCCTCGACGGGGGACTGCTGTGTTGGGCTTT
GAGCCGGAGCGCCCCACGACAGCGAGTTCGAGATTTGCGCTTCGGTGTTT
TTTGTTTTGAGGCGCTCAAACCCCGCGAGAGTTTTTTTTTGCACGCTGCT
GCCGTTGCAGTCCCAAACTGCATTGGGTCCCCACAGCACCAGTGCCAGCA
TAAAGTGGCCCCTGCACTTGGCATTAAATCGACCGCCGTGTGGCAAATCG
CCATCAAATCCAAGACCCGTCGACAACAACAGTAGTATCGTAGTTGTATG
ACAGCACAGCAGGAAGCAGCAGACATTCGGTTGTCACGGCGACTGCTGTC
GTGCTTCTTGCCCCCCCCCCCCCCCCGCCCTGAGAAAAAAACGAACAAGC
ACCTCCTCACCTCATCGGATTTGTTGCACGCATCATATGATACAACCCCG
TACGATAGGGGGGCCTGCGTACACGATATAAAACTCGTTTGAGCGCCCCC
CCCCCCGCCGCAAACACGCTTCCGTACGTATGGCAGGACCGCAAAGAAAA
CCAGTACGGGCCATTCCCGGCGAAACAGCTGGTGGAGGCGCACAACGCTG
GGTACATCAACGACAGGAAGGTCTTGGTCAAGGAGGCGAGGATGAAGGGC
GAGTTCCGCCGCATGGGTGAGAGTGCGAGAAAAGGGGAGCCGGGGCGCGG
CGCTTGTTGTCTGCACGATACAATAGTTATTGATTTGTTATTCTGTTTTT
GGTTGGTGCCGTAGTACTCCACTACCTCTCGCAGCGTTTTTTCTTTTCTT
TTTTTTTTCGTTTTTCATGTTTGTGCTGCTGGTAGGATATGGACCGATGA
ATGAACAATGAACGGGGTGCGTGTGGTGTGGTACGATACGCGCTCGGTGT
GTGTTTGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGT
GTGCGTGCGTGCGCTTCTTTTTTCACTACTTTTTTGCAGTAAATATCATA
CTTTTTCGAAGTACGTAACATATTCCTGTGGATCCTGTAAATATTGACTC
TCTCTTGCGAGATGATAACGATCTCGCGCGTTCGGAGGTCTTCTTGTATC
GTCTCACGTATTGTATGTATGGATCCTGCATACACCGTCGTGTGCTGCAC
CGTCCGGGTGGTATAGGTTTAGCGCGCTTGATCGCTCCCCCAACGTGATC
TGTTCTGATCATCCAGTTTGCCCCGGTTTCGGCTTTCCGTCTCTCTCTCT
TTCTTTAGTTCCATTCTTCAGCAGGCATTAGCTCTCTCGCCCTCAGTTTT
CTGCTCCGTTATTTTCTTTTCCTCTTTTTTCTTTTCTCTTCTCTTCTCTT
CTTTTTCTTTTCTTTTCTTTTCTTTCCTTTTGTTCAATCTCAGGTGCCCG
CGCTTTGATGCACGGGCCTTCCAGCGACGAGGACTTCAAGGCGCTCAACG
TGTGGCCGCAGGTGGACGCGCATCACCCCCTCGCAGACAAGATACTGTCT
CCCGGAGACAGCTCCTCCAAGGACTTCCGGCGGTGGAGCTTCAACATTTT
CGACCTGGAGACGCAGGAGCTGGGGATGCTGGCGGCCACGATCCTGGCCG
AGACGGGCCTGCCCCGCGTGTTCGGGATCAGCATGAAGGTGTGACAGAGG
AGGCTGCAATAAATACCCCCCCCCCCCCCGTGTTTTGCTGTATAACATAC
GATTTTTTTTTTTCTCTGGCATCATTCATTCGTGTTTGCTTTTTGTCTGC
CGTAAGAGTGGGAGATTGGGAGATGGTTTACTCGTGTGGTCGGGATGAGC
CAGCGTGAAGGTCGTGAAGAGGTGTGTTCGTGTGTGGCTCACTGCTGTTG
TGTTGTGTTGCTGTTGTTTATTGTAACCCTATTATTATTTTACTGTGTTA
GTATTGTTCGTGTGTTTGTTATTGTTATTATTTGCTGTATTATTCGTAAT
TGTTTTTCTTGTTCTTACTTCTGTTGTAATTTCAATGTGTAATTATTGGA
TTTGGGTTGAGGCCTCCTGCGCCGGCCTGCGGTCTACCTACGGTAAATTG
TTTTTACGCAAGATTACACCCCCCGCGGTACTGCTGTAACTAGCTTTTAA
CACTTTTTTTGGTTTTCAAAAACAATGCAAGTATTTGTCACCGGGTGTAT
TCTGTGGGTGGGGGAGGTGGTATCTTGTATATGCCGACCTTCTTTTTTCT
ATCCGAGAGGAGTTTCAAGCTTGTTCGTCACCGGGTGTGTTTTGTGGGTG
GGAGGGGGGGTGGCATCTTGCATATGCCGATTTTTTTTTATCCGAGAGAA
GTCTCACGTTTTGGGCTCATGCTGGTCGGTAAAAATACTACCACCGAGGT
TGGTGTCTGGTGTGGTTGTCTTGTCTTGTGTCGTATGCGGTGAAGCGTTT
GCCGATGCCATGACACGCACCCTTGTACTACACTCTACTGCATGCTTGGC
CCCGTAGTACACCTGTATACGGTACGGCTCTCTGTCCCCAACTGCGCTGC
CTGTTTACTCACTTCACTTCACTTCACTTTACTTTACTTTATTTTACGCA
TTAACGTTCTGTACTGTTGTTACCTCCACCCCCCCCCCCAACCTCAACCT
CAATCCTCCTTCCCAGACGTTCGCGCACTTCATGTCGGCGGTGGGATTCT
TCATGGGGAGGAACCCTCGCGTCCACTACCACAACCTCTACCACGCGGTG
GACGTCATGCACGCCACGTACCTCACTCTGGAAGGCATGGGGGCCTCGGG
GCTCCTGACGGAGACAGAGCAGCTCGCCCTCATATTGTCGGCACTGTGCC
ACGACCTCGACCACCCCGGGCTCACCAACTCGTTCCAGGTGTGGTGTGAC
TGCTGGCGTACCGTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTAAGAAT
GAAGAAGTAGCTGGTAAAATTAAATAATGCGTAGTGTCGGCTGGTGAAGT
AAATAATACCGTAGCGGCTGGTGTATTTTTGTGGCGTTTTCCAGGGTGCA
TTCCTATTTCGTCCTTTTTTTTTTTGCTACAGTATCATAGAAGTACGTCG
TTTGTTTGTTTTTTCCTCTCCGAATGTTATTGTACGATACAGCAGCAGTG
GTGTGGGCTGTTTTTTCGCATATCATACATGTACAGCAGTAGCACGATAC
GCACATCACACCCATGTAACTGCTGTCAAGGCTCTGAATGTAACGCTTCA
CCGTTTCACACGCTGTTGTATTCGCCACATCGACGTGCGTTCCTTTTCAC
GTATCTCGCACGACCGCCCTGTGCTGCTGCTGCTGTCGGCTTTCGTTCGC
ATCGGACACACGCCAAAAACGTCCGCGCACGCGCGCCAGACGGCAACCGA
GAGCCCCCTGGCCAACCTCTACAACGACCAGGCTCCCTTGGAACACCACC
ACTTGGCCATCATGTTCCAGATTCTGAGGAGAGAAGGGTGCGACATCCTG
GGACACCTCGAGAAACCGCAGAAGGTACGTACAGGTCGACGAAATGGCAA
GGTTTTCGAGGTGGTGGGGGGGTGGTGGTGGTTTGGTGTGTGCGAAAGGA
TGGGGTGCTAGACACGGGGTGGTTAGTCGGCCACACGCACTCGGACACAC
GCGGATGTTGTTCCGTACACCTCGAAGCTATTCTGTGTAATTTTTTTGAG
AGATCCAGGGCTCTGTCGACAGATGCCACACACAAGAGAGCTATCATAGT
GTGGGACGGCTGGCGGTCTCTTCTCTGTTTGTTTCGTATCTCAGCGACCA
ATCAAACGTCATCAGCCCTCTTCCTATTTGCGTCGCTGTTCGTCGGTATT
GCTGTGCTGCTGCTGCTGTTGTTAGTATTTTGCTTGACTTCTGTCGTCGA
CCGTATCAAGACCGCCTGCGATGGTGCAGAGCATTAACCGTCAGCCAACG
CTGCTGCCTGCTTGTTTGTTTTGTTTTGTTCGTTCGTCTTTCTGTTTTTT
TGTATGTATGTTTGTTTGTTTTTGTATTGTTTTGTTTGTTTGTCTGTTTA
TTTGTACGCTTGTTTATTGAATCGTCTGTTTGTTTTTTTGTTGTTTGTTT
TTTTGTTGTTTGTTTTGTTTGTTTTTTTGTTTTTTTTGTTTGTTTTTTGG
AACGGCCCGGCACCGTCCCGCCCAGGCTCGCATTCGAGAGGTGATGATCC
AGGGGATCCTGGCGACGGAGATGTCCGAGCACGGGACGCACATCGCCAAG
GTGGACAAGCTCACCAACGACTTCCCGAATATCACGCTCAGGGTGGCCAG
GTGGGCTTCGGGGAAGACCTCGGCCGGCGACCTAACCCCGTCTCTTCTTC
TCTACCCTTTTCGTCCCCGCGGCTGCCGCCGATGCCGCCCACTCGTGGAA
ACCCAAGCCTCGCCGCCGTTGTCGATGTCGGGGTCCAGCAGGGGGGTCGC
GCTCGCAGCAGGTGCCCGGCGCGGCAGCGGCCGCCCTGGGGCTGGAGGAC
TGCGACAGGCTCACAGTCGCCAGCGCTCTGCTGCACGCGGCCGACCTGAG
CTCACCCGGGAGGCCGTTTGTGACGTGCAAGGTCTGGGTGCTACGGCTGC
TGGACGAGTTCAAGTTCCAGGCTGAACAGGTGTGTTTGTGTGTTTGTGTG
TGCGTGCGTGCATTGATGTGGTTCATGTGGTTCATGTGGTTCATGTGCGC
GCTTTTTGTTGAAGGAGGAGGGGGAGGGGGAGGGGGCAAGCAAACGTTTA
AGGGACGAGTGTGGCGGTGGTGGTGATGGAGTTGTGTGTTTTAATGTTGA
TTGCTCACAATTTATGGCGTGTACCGGTCGCGTAGCGTGCGCCTTTCGGG
GACGAGTGTCCCCCCCCCCCACCAACACACACACGCACACACGCACGATA
TGTGCCTGGTTTGTGACCACGGGCTAGACTGCGGCGGTAGTGAGCTAATG
TAAGAATCAACAACAACAACAACAACACACATGGCCGATCAATCCATCCC
AGCAGGCCCCAAACCCCACCACAGTCACCATCAACCAGCATTCCTCCTCG
ATCCTGATCCCCTCTGCGCCTTGCCCCCCCCCATCTTTCCTCTTCCCTGC
GTGTCTGCTCGTCTTTCTCCCTGCGCCGCAGGAGAGACAACGGGGCCTGC
GGGTCACGGTGCTGGAAGGCCTGCCGTCGGCATCGCAGCCGGGCTTCATT
GACGCGTTCTTGCTCCGTTCTTCGGCGTTGTTGCCGATGGCGCCAGGGCT
ATTGACGGTACATCCCAACCTCCGCGCCAACAGGTGAGGGAAAGGAGAGA
TGTTCGAGCCCGTGTGACAGGAGGTGCTTGGAGGTGCCGGTGGGTACCGC
ACGGCATGTAGTGCAAGTGGAGCCCGTCAGGGCGTGAGATAGACGACGAG
GCGGTGGCGTGGCGGTGGTGGTGGACCACCGGGCTGTGTTGCTTGTTTGC
TGTTCGTGCGTTGAACATCTGGCGATGCTCCATGTTGCTTTCGATTTCAC
GCGGTGGCTCGTGCTGCTCCTGACTGTGTTTGAAACCTTCTTCACTGCCT
GCACCTCTTCGTTGCCACTGTGTTCAGACCAGCAGCTGTGGGGCGAAATT
TGATCGCAGTTGTTGTGCGTGTTTCCTGTTTGTGTTGGGGTCGCAGGTAA
AGACCCGCAATCGATGCAGCAGTACGCATGTATCACCCGCATCAATTCAT
GCGCACGCACGCACGGCACGGCACGATACGGCACACGCACCCAAACAGGA
ACCAATGGAAGCTATCGCCGAGCAAGAGGCACAGTTGGCGGCGGCAGCGA
ACGATTCTCTGGCCGGCAGCGCCAACGGCAGGCCGGGTGACCACAACAGC
ACCGGCAGCACAAGCAGCGGCCCTGGCAGCTCGTGCGGCGGAGGTCGACC
CTACAACGCCGGCGGTGGCGGCCTGGCGCTGCCGTTGTCGACGCCGTCGG
CAACAACGGCGGCCGGGGGCAACGGCGGTTCAGCGGAGGCACGATCGGCA
TCGAAAATAAGCTCGGCAGCGTCGCCCCCGTCCCCACCGGCCGCTCCAAC
AGCGACGGCAGCATGGACAGGCGCGTCAGCAGCGTTCTCAGCAACCCGGG
GACGCCACCGGGGTTCGCGGGCTTGGGCATTAGCATCAACATCAACAACA
ACAACGGCGGCGGCGTTGGTGCGGCGTGGCGAAGGCAGAGCGCGATGGGG
CAGGCGAGTGGATTCGTGAGCGGGTTTGGAAACCCCAGATGGGGCGTTGT
TCGAGCGGGCGGTAGCGATCCGCGGGGATGGGCGAGTGGGGAGGAGAAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1384:124..6422+

>mRNA_P-littoralis_Contig1384.1.1 ID=mRNA_P-littoralis_Contig1384.1.1|Name=mRNA_P-littoralis_Contig1384.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1155bp|location=Sequence derived from alignment at P-littoralis_Contig1384:124..6422+ (Pylaiella littoralis U1_48)
GCGGTGATCTCGACCTCGACCAGCTGGACGCCCCACCTACTACTGCAAGG
ACCGCAAAGAAAACCAGTACGGGCCATTCCCGGCGAAACAGCTGGTGGAG
GCGCACAACGCTGGGTACATCAACGACAGGAAGGTCTTGGTCAAGGAGGC
GAGGATGAAGGGCGAGTTCCGCCGCATGGGTGCCCGCGCTTTGATGCACG
GGCCTTCCAGCGACGAGGACTTCAAGGCGCTCAACGTGTGGCCGCAGGTG
GACGCGCATCACCCCCTCGCAGACAAGATACTGTCTCCCGGAGACAGCTC
CTCCAAGGACTTCCGGCGGTGGAGCTTCAACATTTTCGACCTGGAGACGC
AGGAGCTGGGGATGCTGGCGGCCACGATCCTGGCCGAGACGGGCCTGCCC
CGCGTGTTCGGGATCAGCATGAAGACGTTCGCGCACTTCATGTCGGCGGT
GGGATTCTTCATGGGGAGGAACCCTCGCGTCCACTACCACAACCTCTACC
ACGCGGTGGACGTCATGCACGCCACGTACCTCACTCTGGAAGGCATGGGG
GCCTCGGGGCTCCTGACGGAGACAGAGCAGCTCGCCCTCATATTGTCGGC
ACTGTGCCACGACCTCGACCACCCCGGGCTCACCAACTCGTTCCAGACGG
CAACCGAGAGCCCCCTGGCCAACCTCTACAACGACCAGGCTCCCTTGGAA
CACCACCACTTGGCCATCATGTTCCAGATTCTGAGGAGAGAAGGGTGCGA
CATCCTGGGACACCTCGAGAAACCGCAGAAGGCTCGCATTCGAGAGGTGA
TGATCCAGGGGATCCTGGCGACGGAGATGTCCGAGCACGGGACGCACATC
GCCAAGGTGGACAAGCTCACCAACGACTTCCCGAATATCACGCTCAGGGT
GGCCAGGTGGGCTTCGGGGAAGACCTCGGCCGGCGACCTAACCCCGTCTC
TTCTTCTCTACCCTTTTCGTCCCCGCGGCTGCCGCCGATGCCGCCCACTC
GTGGAAACCCAAGCCTCGCCGCCGTTGTCGATGTCGGGGTCCAGCAGGGG
GGTCGCGCTCGCAGCAGGTGCCCGGCGCGGCAGCGGCCGCCCTGGGGCTG
GAGGACTGCGACAGGCTCACAGTCGCCAGCGCTCTGCTGCACGCGGCCGA
CCTGA
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