mRNA_P-littoralis_Contig137.4.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Match: D7FM77_ECTSI (Pyridoxal 5'-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM77_ECTSI) HSP 1 Score: 313 bits (801), Expect = 2.390e-101 Identity = 169/278 (60.79%), Postives = 198/278 (71.22%), Query Frame = 3
Query: 105 STATTMAAQAPTWAGLLKQGIARHKNDPTAKYCQLATAAVGGGASCRTWVFRGFYEDKGALKFITDRRSQKIPEIEADPAGEVCFYLKNTREQFRIKGRLQVVDAGEGDEVLAKARRHQWTQISPAAQGSFATSLIPGLPIQSGSETPPSEGGGDSASRKDEGTEDRSDHRRGRXXXXXXXNSENMDNADDAGNEIEPSKDLAVSEDFCLVLLWPTFVDHLQLGGEQLRNVHKIKGDRDGGGALLA-----ASEVEASAGIRESESSGVAWVTMAVNP 923
+ A+T A PTW L+QGIARHKNDPTAKYCQLATAA+GGGASCRTWVFRGFYEDKGALKF+TDRRSQK+PEI ADPAGEVCF LK TREQFR+KGRLQVVDAGE DE LAKARRHQWTQISPA+Q SF TSLIPGL + +T S+ G + + + EG++ HRRG ++A + +VS++FCLVLLWP+FVDHL+L Q R++HKI GDRDGGGA+LA A+ A G S + WVTMAVNP
Sbjct: 2 AAASTGTASTPTWQASLQQGIARHKNDPTAKYCQLATAAIGGGASCRTWVFRGFYEDKGALKFVTDRRSQKVPEIAADPAGEVCFCLKKTREQFRVKGRLQVVDAGESDEALAKARRHQWTQISPASQASFETSLIPGLEVPPEPQTDHSDDAGATGTTQ-EGSQT---HRRG--------------GEEEASVSEGDASRSSVSDEFCLVLLWPSFVDHLRLVDGQSRSIHKITGDRDGGGAILAGVTAAAAMKGARGGTDGVPQSPITWVTMAVNP 261
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Match: A0A6P0VBP7_9CYAN (Pyridoxamine 5'-phosphate oxidase n=5 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P0VBP7_9CYAN) HSP 1 Score: 128 bits (321), Expect = 9.940e-31 Identity = 90/229 (39.30%), Postives = 121/229 (52.84%), Query Frame = 3
Query: 135 PTWAGLLKQGIARHKNDPTAKYCQLATAAVGGGASCRTWVFRGFYEDK-GALKFITDRRSQKIPEIEADPAGEVCFYLKNTREQFRIKGRLQVVDAGEGDEVLAKARRHQWTQISPAAQGSFATSLIPGLPIQSGSETPPSEGGGDSASRKDEGTEDRSDHRRGRXXXXXXXNSENMDNADDAGNEIEPSKDLAVSEDFCLVLLWPTFVDHLQLGGE-QLRNVHKIKGD 815
P W LL + R++++P ++Y QLAT G S RT VFRGF ED +LK ITD RS KI +IE GE+C+Y TREQFRI+G L++V A + D L KAR+ W +S AA+ FA + PG P EG +KD T D G N N D + ++EP + FCL+LL P VDHLQL G+ Q R +++++ D
Sbjct: 3 PPWRSLLSSALHRNRSEPHSRYFQLATVTPEGYPSNRTVVFRGFLEDDHSSLKIITDIRSAKIQDIERQAIGEICWYFTKTREQFRIQGVLRLVKAQDEDADLLKARKITWHNLSDAARSQFAWA-DPGQPATG-------EG------KKDAETRRHGDGENGNPTQ----NFVNPPAIDKSAFDVEPPDPNLPLDTFCLLLLVPQKVDHLQLRGDPQQRCIYQLQTD 213
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Match: K9SF36_9CYAN (Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Pseudanabaena sp. PCC 7367 TaxID=82654 RepID=K9SF36_9CYAN) HSP 1 Score: 126 bits (316), Expect = 2.270e-30 Identity = 80/228 (35.09%), Postives = 112/228 (49.12%), Query Frame = 3
Query: 141 WAGLLKQGIARHKNDPTAKYCQLATAAVGGGASCRTWVFRGFYEDKGALKFITDRRSQKIPEIEADPAGEVCFYLKNTREQFRIKGRLQVVDAGEGDEVLAKARRHQWTQISPAAQGSFATSLIPGLPIQSGSETPPSEGGGDSASRKDEGTEDRSDHRRGRXXXXXXXNSENMDNADDAGNEIEPSKDLAVSEDFCLVLLWPTFVDHLQLGGEQLRNVHKIKGDRDG 824
W L + + +HK++P ++Y Q+AT G + RT VFRGF E +KFITDRRS+K+ ++ P E+C+Y TREQFRI G L V+DA D+ L +AR+ W QIS AA+ F PG P+ S P + G D ++EP + FCLV++ P VDHLQL G+Q R +++ DR G
Sbjct: 6 WRSFLARSLHKHKSEPQSRYFQIATVDKQGYPTNRTVVFRGFREKDDQIKFITDRRSEKVLHLDRQPRAEICWYFAKTREQFRIAGPLMVIDAAYPDQELLQARQATWQQISDAARSQFLWPA-PGQPVTK-SPVPDASGSPD---------------------------------------KMEPGAN------FCLVIMAPQRVDHLQLAGQQHRTIYER--DRQG 184
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Match: A0A7X6CS31_9CYAN (Pyridoxamine 5'-phosphate oxidase (Fragment) n=1 Tax=Microcoleus sp. SU_5_6 TaxID=2720483 RepID=A0A7X6CS31_9CYAN) HSP 1 Score: 122 bits (305), Expect = 3.390e-29 Identity = 64/132 (48.48%), Postives = 84/132 (63.64%), Query Frame = 3
Query: 105 STATTMAAQAPTWAGLLKQGIARHKNDPTAKYCQLATAAVGGGASCRTWVFRGFYEDKGALKFITDRRSQKIPEIEADPAGEVCFYLKNTREQFRIKGRLQVVDAGEGDEVLAKARRHQWTQISPAAQGSFA 500
ST + + AP W LL + R+++ A+Y QLAT G + RT VFRGF E+ LKFITD RSQK+ EI+ P GE+C+Y TREQFRI GRL +V+AG+ D L +AR+ W +IS AA+ FA
Sbjct: 8 STINSQLSLAP-WRSLLAGSLHRNRSLVYARYLQLATVRASGRPANRTVVFRGFVENTNQLKFITDLRSQKVQEIDLYPWGEICWYFPKTREQFRIAGRLNLVNAGDSDPALQQARQIAWQEISEAARSQFA 138
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Match: A0A1Z4JAI4_LEPBY (Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Leptolyngbya boryana NIES-2135 TaxID=1973484 RepID=A0A1Z4JAI4_LEPBY) HSP 1 Score: 119 bits (297), Expect = 1.100e-27 Identity = 61/128 (47.66%), Postives = 81/128 (63.28%), Query Frame = 3
Query: 141 WAGLLKQGIARHKNDPTAKYCQLATAAVGGGASCRTWVFRGFYEDKGALKFITDRRSQKIPEIEADPAGEVCFYLKNTREQFRIKGRLQVVDAGEGDEVLAKARRHQWTQISPAAQGSFATSLIPGLP 524
W L+ + + R++ P A+Y QLAT G + RT VFRGF E+ LKF+TD RS+K +IE P GEVC+Y NTREQFRI G L+++D DE L KAR+ W +S +A+ FA + PGLP
Sbjct: 6 WRSLIARALHRNRALPNARYVQLATVRPDGKPANRTIVFRGFLEETDQLKFVTDDRSEKPQQIEHCPWGEVCWYFPNTREQFRIAGELKLIDRANSDEKLQKARQQAWQDMSDSARIQFAWAH-PGLP 132
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Match: A0A845Y9A3_9CYAN (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845Y9A3_9CYAN) HSP 1 Score: 119 bits (297), Expect = 1.130e-27 Identity = 80/229 (34.93%), Postives = 111/229 (48.47%), Query Frame = 3
Query: 135 PTWAGLLKQGIARHKNDPTAKYCQLATAAVGGGASCRTWVFRGFYED-KGALKFITDRRSQKIPEIEADPAGEVCFYLKNTREQFRIKGRLQVVDAGEGDEVLAKARRHQWTQISPAAQGSFATSLIPGLPIQSGSETPPSEGGGDSASRKDEGTEDRSDHRRGRXXXXXXXNSENMDNADDAGNEIEPSKDLAVSEDFCLVLLWPTFVDHLQLGGE-QLRNVHKIKGD 815
P W LL I R++++P ++Y QLAT G S RT VFRGF ED + ++K ITD RS KI +IE GE+C+Y TREQFRI+G L++V + D L KAR+ W +S AA+ FA + PG P D + ++EP + FCL+LL P VDHLQL G+ Q R +++++ D
Sbjct: 3 PPWRSLLSGAIHRNRSEPHSRYFQLATMTPEGYPSNRTVVFRGFLEDDRSSVKIITDVRSAKIQDIERQAIGEICWYFTKTREQFRIQGVLRLVTDQDKDSDLLKARKITWHNLSDAARSQFAWAA-PGQPA-----------------------------------------------TDKSAFDVEPPAPNLPLDTFCLLLLVPQKVDHLQLRGDPQQRCIYQLETD 183
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Match: A0A5B8MFA9_9CHLO (Pyridoxal 5'-phosphate synthase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MFA9_9CHLO) HSP 1 Score: 118 bits (295), Expect = 2.460e-27 Identity = 78/233 (33.48%), Postives = 112/233 (48.07%), Query Frame = 3
Query: 132 APTWAGLLKQGIARHKNDPTAKYCQLATAAVGGGASCRTWVFRGFYEDKGALKFITDRRSQKIPEIEADPAGEVCFYLKNTREQFRIKGRLQVVDAGEGDEVLAKARRHQWTQISPAAQGSFATSLIPGLPIQSGSETPPSEGGGDSASRKDEGTEDRSDHRRGRXXXXXXXNSENMDNADDAGNEIEP--SKDLAVSEDFCLVLLWPTFVDHLQLGGEQLRNVHKIKGDRDG 824
AP W + + + ++ A+Y QLAT G S RT V+RGF ED L F+TDRRS+K+ E+ A+P E+C+Y TREQ+RI G+++VV G+GDE L AR + W ++S A+G FA PGL RGR DD+ +P ++D + ++FCL++L P VDHL L + + GD G
Sbjct: 3 APLWRERIVKSLKKNSRLAYARYAQLATVREDGKPSNRTVVYRGFLEDTAKLTFVTDRRSKKVNELGANPWVELCWYFPQTREQYRIAGKMRVVQVGDGDEGLLGARGNAWRRLSDGARGQFAWPF-PGL-------------------------------ERGR---------------DDSAFSPDPPVTQDQSPLDEFCLLVLDPDHVDHLNLKSNERCVFSRATGDSGG 188
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Match: A0A0S3U848_9CYAN (Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A0S3U848_9CYAN) HSP 1 Score: 116 bits (290), Expect = 1.060e-26 Identity = 77/215 (35.81%), Postives = 107/215 (49.77%), Query Frame = 3
Query: 141 WAGLLKQGIARHKNDPTAKYCQLATAAVGGGASCRTWVFRGFYEDKGALKFITDRRSQKIPEIEADPAGEVCFYLKNTREQFRIKGRLQVVDAGEGDEVLAKARRHQWTQISPAAQGSFATSLIPGLP-IQSGSETPPSEGGGDSASRKDEGTEDRSDHRRGRXXXXXXXNSENMDNADDAGNEIEPSKDLAVSEDFCLVLLWPTFVDHLQLGGE 782
W +L + + R+++ P A+Y QLAT G + RT VFRGF ED L+F+TD RS+K +IE P EVC+Y NTREQFRI G+L ++D DE L K+R+ W +S +A+ FA + PG P + + +PP A ++ EP E FCL+LL PT VDHL+L G+
Sbjct: 6 WRSILARALHRNRSLPYARYVQLATVRPTGKPANRTIVFRGFLEDTNQLQFVTDDRSEKPKQIEYCPWAEVCWYFPNTREQFRIAGKLSLIDRTNRDETLQKSRQQIWQALSDSARIQFAWAH-PGQPRAEVETFSPP------------------------------------------APSQTEPL------EQFCLLLLEPTEVDHLELRGD 171
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Match: A0A7C3KI09_9CYAN (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3KI09_9CYAN) HSP 1 Score: 115 bits (288), Expect = 2.090e-26 Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 3
Query: 141 WAGLLKQGIARHKNDPTAKYCQLATAAVGGGASCRTWVFRGFYEDKGALKFITDRRSQKIPEIEADPAGEVCFYLKNTREQFRIKGRLQVVDAGEGDEVLAKARRHQWTQISPAAQGSFATSLIPGLP 524
W L + + R+++ A+Y QLAT G + RT VFRGF+ D L+F+TD RS+K+ EI P EVC+Y NTREQFR+ GRL ++ E D L KAR+ W ++S AA+ FA + PG+P
Sbjct: 7 WRSPLARALHRNRSLVYARYVQLATVRQNGHPANRTVVFRGFWADTNQLRFVTDNRSEKVSEITLSPWAEVCWYFPNTREQFRLAGRLSLISHNEPDSTLQKARQQIWQELSDAARSQFAWA-DPGMP 133
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Match: A0A0P4UYU9_9CYAN (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Leptolyngbya sp. NIES-2104 TaxID=1552121 RepID=A0A0P4UYU9_9CYAN) HSP 1 Score: 115 bits (287), Expect = 2.810e-26 Identity = 82/230 (35.65%), Postives = 113/230 (49.13%), Query Frame = 3
Query: 141 WAGLLKQGIARHKNDPTAKYCQLATAAVGGGASCRTWVFRGFYEDKGALKFITDRRSQKIPEIEADPAGEVCFYLKNTREQFRIKGRLQVVDAGEGDEVLAKARRHQWTQISPAAQGSFATSLIPGLPIQSGSET--PPSEGGGDSASRKDEGTEDRSDHRRGRXXXXXXXNSENMDNADDAGNEIEPSKDLAVSEDFCLVLLWPTFVDHLQLGGEQLRNVHKIKGDRDG 824
W +L + R+++ P A+Y QLAT G + RT VFRGF ED LKF+TD RS+K +IE P E+C+Y NTREQFR G+L ++D DE L KAR+ W ++S +AQ FA PG P ++ SET PP+ G + +P FCL+LL PT VDHL+L G+ +N H+ + +G
Sbjct: 6 WRSILSGALHRNRSLPYARYAQLATVRPDGKPANRTIVFRGFLEDTNQLKFVTDDRSEKPKQIEHCPWAELCWYFPNTREQFRFAGKLSLIDHTNPDEKLQKARQLIWQELSDSAQLQFAWEH-PGQP-RAASETFSPPAPG------------------------------------------QTDPLPQ------FCLLLLDPTDVDHLELRGDP-QNRHQYHLNENG 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig137.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig137.4.1 >prot_P-littoralis_Contig137.4.1 ID=prot_P-littoralis_Contig137.4.1|Name=mRNA_P-littoralis_Contig137.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=293bp MRILSWVRIAPSLSSISGRSTATTMAAQAPTWAGLLKQGIARHKNDPTAKback to top mRNA from alignment at P-littoralis_Contig137:19528..22822- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig137.4.1 ID=mRNA_P-littoralis_Contig137.4.1|Name=mRNA_P-littoralis_Contig137.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3295bp|location=Sequence derived from alignment at P-littoralis_Contig137:19528..22822- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig137:19528..22822- >mRNA_P-littoralis_Contig137.4.1 ID=mRNA_P-littoralis_Contig137.4.1|Name=mRNA_P-littoralis_Contig137.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=879bp|location=Sequence derived from alignment at P-littoralis_Contig137:19528..22822- (Pylaiella littoralis U1_48)back to top |