mRNA_P-littoralis_Contig134.8.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig134.8.1 vs. uniprot
Match: A0A6H5J6K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K4_9PHAE) HSP 1 Score: 282 bits (721), Expect = 8.360e-92 Identity = 133/184 (72.28%), Postives = 148/184 (80.43%), Query Frame = 1
Query: 457 MTTARLNDEGHFATFSFSYNHLLFAKETEAFNGVTINDKPVWQKQPSGPSTLHNSLIITDHFTSMTPFLNPL-KKLCKPRPLTDRLFLKQCVQQYTKSGRRHRDGENGPHRICVTIHDPAAPPHFKQLEVGVADANKAKGGHAVNPFQLKADGKPDSRRIDCKKGSCHLMDRVGTGTDSHAHHQ 1005
MTTAR+ +EGH AT SFSYNH LF KE AFN + ++ KPVWQKQP GPSTLHNS++I D F S+ PFL P+ KKLCKPRP TDRLFLKQ QQYT SGRRHRDG+NGP R+CVTIHDPAAPPH KQLE+G+AD +KAKG AVNPFQ KADG PDSRR DC GS HLMD V TGT SHA H+
Sbjct: 1 MTTARIFNEGHIATGSFSYNHPLFEKEAAAFNDIKVDGKPVWQKQPPGPSTLHNSVVINDRFPSLAPFLGPVEKKLCKPRPTTDRLFLKQRAQQYTTSGRRHRDGKNGPWRMCVTIHDPAAPPHAKQLEIGLADGSKAKGDGAVNPFQTKADGTPDSRRFDCPSGSYHLMDEVATGTVSHASHK 184
BLAST of mRNA_P-littoralis_Contig134.8.1 vs. uniprot
Match: D8LFC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC5_ECTSI) HSP 1 Score: 281 bits (720), Expect = 1.570e-88 Identity = 143/224 (63.84%), Postives = 164/224 (73.21%), Query Frame = 1
Query: 352 TASKGKKRKKPTSXKGKKPSNIRYRYRGVPDQYKEMTTARLNDEGHFATFSFSYNHLLFAKETEAFNGVTINDKPVWQKQPSGPSTLHNSLIITDHFTSMTPFLNPLKKLCKPRPLTDRLFLKQCVQQYTKSGRRHRDGENGPHRICVTIHDPAAPPHFKQLEVGVADANKAKGGHAVNPFQLKADGKPDSRRIDCKKGSCHLMDRVGTGTDSHAHHQALINKD 1023
TAS+GKKRKKPT GKK IR+ YR V QY+ MTT RL EGH A SFSYNH FA+E AFNGV I+ K VWQ+QP GPSTLHN++ I D F S+ PFL PL LCK R T RLF+KQ QQYT SGRRHRDG+NG R+C+T+H+P AP FK+LEVGVADA AKG A NP+QLKADG PD IDC GS +MD VGTGT SHAHHQA+I+K+
Sbjct: 67 TASEGKKRKKPTVSTGKK--KIRHDYRPVDPQYERMTTERLFSEGHIAMGSFSYNHPQFAEEAAAFNGVKIDGKSVWQQQPCGPSTLHNNVTIIDRFPSLAPFLVPLDNLCKRRDSTVRLFVKQRAQQYTTSGRRHRDGKNGRWRMCITVHNPGAPLGFKRLEVGVADARVAKGDQATNPWQLKADGTPDMECIDCTTGSYQIMDEVGTGTASHAHHQAIIDKN 288
BLAST of mRNA_P-littoralis_Contig134.8.1 vs. uniprot
Match: A0A6H5L1U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U0_9PHAE) HSP 1 Score: 270 bits (689), Expect = 1.780e-85 Identity = 123/194 (63.40%), Postives = 148/194 (76.29%), Query Frame = 1
Query: 445 QYKEMTTARLNDEGHFATFSFSYNHLLFAKETEAFNGVTINDKPVWQKQPSGPSTLHNSLIITDHFTSMTPFLNPLKKLCKPRPLTDRLFLKQCVQQYTKSGRRHRDGENGPHRICVTIHDPAAPPHFKQLEVGVADANKAKGGHAVNPFQLKADGKPDSRRIDCKKGSCHLMDRVGTGTDSHAHHQALINKDL 1026
++ MT RL EG+ T FSYNH F +E FNGV +N KP WQKQPSGPSTLHN++++TDHF S+ PFL PL KLCKPRP TDRLF KQ VQQ KSGRRH D +N P R+CVT+ + +AP KQLE+G+ DA+KAKGG AVNP+QL+ADG+PD+RR DC GS H+MD V TG DSHAHHQAL+NK+L
Sbjct: 39 RHANMTIERLFSEGYIVTGGFSYNHPQFEREMAKFNGVKVNGKPTWQKQPSGPSTLHNNIVVTDHFRSLAPFLGPLAKLCKPRPSTDRLFTKQRVQQSIKSGRRHHDAKNAPWRVCVTVANLSAPKGLKQLEIGMTDASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYHVMDTVATGLDSHAHHQALVNKEL 232
BLAST of mRNA_P-littoralis_Contig134.8.1 vs. uniprot
Match: A0A6H5KI01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI01_9PHAE) HSP 1 Score: 260 bits (665), Expect = 7.420e-82 Identity = 126/187 (67.38%), Postives = 146/187 (78.07%), Query Frame = 1
Query: 349 PTASKGKKRKKPTSXKGKKPSNIRYRYRGVPDQYKEMTTARLNDEGHFATFSFSYNHLLFAKETEAFNGVTINDKPVWQKQPSGPSTLHNSLIITDHFTSMTPFLNPLKKLCKPRPLTDRLFLKQCVQQYTKSGRRHRDGENGPHRICVTIHDPAAPPHFKQLEVGVADANKAKGGHAVNPFQLKAD 909
P SKG+KRK P + KGKKP R+ Y+ VP QY+ MTTARL +GH AT +FSYNH FAKE +AFNGVTI K VWQ+QPSGPSTLHN++ I DHF+S+ PFL PL+KLCK R TDRLFLKQ QQY SGRRHRDG NG R+CVT+H+P APP FK+LEVGVADA AKGG A+NP+QLKAD
Sbjct: 50 PLKSKGEKRKTPPASKGKKPKKARHEYKPVPSQYEVMTTARLFSDGHIATGNFSYNHPQFAKEADAFNGVTIGGKRVWQRQPSGPSTLHNNVTIIDHFSSLAPFLGPLEKLCKLRDSTDRLFLKQRAQQYITSGRRHRDGRNGLWRMCVTVHNPGAPPGFKRLEVGVADARVAKGGDAINPWQLKAD 236
BLAST of mRNA_P-littoralis_Contig134.8.1 vs. uniprot
Match: A0A6H5K3Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q8_9PHAE) HSP 1 Score: 260 bits (664), Expect = 9.080e-81 Identity = 128/211 (60.66%), Postives = 147/211 (69.67%), Query Frame = 1
Query: 394 KGKKPSNIRYRYRGVPDQYKEMTTARLNDEGHFATFSFSYNHLLFAKETEAFNGVTINDKPVWQKQPSGPSTLHNSLIITDHFTSMTPFLNPLKKLCKPRPLTDRLFLKQCVQQYTKSGRRHRDGENGPHRICVTIHDPAAPPHFKQLEVGVADANKAKGGHAVNPFQLKADGKPDSRRIDCKKGSCHLMDRVGTGTDSHAHHQALINKDL 1026
KGKKP R+ Y+ VP QY+ MTTARL +GH A +FSYNH FAKE + FNGVTI K VWQ+QPSGPSTLHN + I DHF+S+ PFL PL+KLCKPR TDRLFLKQ QQY SGRRHRDG+NG R+CVT+H+P APP FK+LE LKADG PD IDC GS H MD VGTGT SHAHHQ +I+K+L
Sbjct: 65 KGKKPKKSRHEYKPVPSQYEMMTTARLFGDGHIARSNFSYNHPQFAKEADTFNGVTIAGKQVWQRQPSGPSTLHNKVTIIDHFSSLAPFLGPLEKLCKPRDSTDRLFLKQRAQQYITSGRRHRDGKNGLWRMCVTVHNPGAPPGFKRLE-------------------LKADGTPDMECIDCPAGSYHTMDEVGTGTASHAHHQEIIDKNL 256
BLAST of mRNA_P-littoralis_Contig134.8.1 vs. uniprot
Match: A0A6H5K5U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U5_9PHAE) HSP 1 Score: 233 bits (594), Expect = 1.830e-69 Identity = 114/190 (60.00%), Postives = 136/190 (71.58%), Query Frame = 1
Query: 457 MTTARLNDEGHFATFSFSYNHLLFAKETEAFNGVTINDKPVWQKQPSGPSTLHNSLIITDHFTSMTPFLNPLKKLCKPRPLTDRLFLKQCVQQYTKSGRRHRDGENGPHRICVTIHDPAAPPHFKQLEVGVADANKAKGGHAVNPFQLKADGKPDSRRIDCKKGSCHLMDRVGTGTDSHAHHQALINKDL 1026
MTT RL EGH A SF+YNH FA+E AFN V +N KPV Q QPS PSTLH S++I D+F+S+TPF L+ LCKPRP T+RL HRDG+NGP R+C+T HDPAAPPH K+ EVGVADA+ AKGG A+ P QLK D KPDS R DC GS H+MD+VGTGT+SHAHHQA+I+K +
Sbjct: 1 MTTERLFSEGHIAIGSFAYNHPQFAEEAAAFNTVKVNRKPVRQTQPSSPSTLHKSIVIADYFSSLTPFSKQLEGLCKPRPKTNRL---------------HRDGKNGPWRMCITAHDPAAPPHTKRSEVGVADASNAKGGGALYPRQLKDDRKPDSVRFDCAAGSYHIMDKVGTGTNSHAHHQAIIDKSV 175
BLAST of mRNA_P-littoralis_Contig134.8.1 vs. uniprot
Match: A0A6H5KU06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU06_9PHAE) HSP 1 Score: 193 bits (491), Expect = 1.080e-56 Identity = 102/179 (56.98%), Postives = 122/179 (68.16%), Query Frame = 1
Query: 349 PTASKGKKRKKPTSXKGKKPSNIRYRYRGVPDQYKEMTTARLNDEGHFATFSFSYNHLLFAKETEAFNGVTINDKPVWQKQPSGPSTLHNSLIITDHFTSMTPFLNPLKKLCKPRPLTDRLFLKQCVQQYTKSGRRHRDGENGPHRICVTIHDPAAPPHFKQLEVGVADANKAKGGHAV 885
P ASK K++K IR+ YR V +Y+EMTT RL E H AT SF +H FA+E E FN VTI KPVWQK+PSG STLHNS+ I +HF S+ P L PL+ LCKPRP T R F KQ QQYTKSGRRHRDG+N R+C+T+HDPAA FK+LE+GVADA+K K A+
Sbjct: 20 PCASKEKRKK------------IRHDYRSVLPEYEEMTTERLFAECHVATGSFFIDHNRFAQEGERFNDVTIGGKPVWQKKPSGHSTLHNSIAIAEHFPSLAPLLIPLEALCKPRPGTARRFKKQRAQQYTKSGRRHRDGKNAEWRMCITVHDPAALSLFKELEIGVADASKVKDVDAI 186
BLAST of mRNA_P-littoralis_Contig134.8.1 vs. uniprot
Match: A0A6H5KRD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD3_9PHAE) HSP 1 Score: 115 bits (288), Expect = 2.120e-26 Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 787 ICVTIHDPAAPPHFKQLEVGVADANKAKGGHAVNPFQLKADGKPDSRRIDCKKGSCHLMDRVGTGTDSHAHHQALINKDL 1026
+C+TIHDPAAP +FKQLE+G D +KAKGGHA+NPF+ K DG D+ DC S H+MDRVGTG HAHHQA I+K L
Sbjct: 109 MCITIHDPAAPSNFKQLEIGEVDGSKAKGGHAINPFRAKPDGTTDATTFDCPSPSYHIMDRVGTGLHFHAHHQAKIDKRL 188
BLAST of mRNA_P-littoralis_Contig134.8.1 vs. uniprot
Match: A0A6H5K7M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M5_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.050e-25 Identity = 52/86 (60.47%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 769 ENGPHRICVTIHDPAAPPHFKQLEVGVADANKAKGGHAVNPFQLKADGKPDSRRIDCKKGSCHLMDRVGTGTDSHAHHQALINKDL 1026
EN R+ +TIHDPAAP +F QLE+GV D +KAKGGHA+NPF+ K DG D+ DC S H+MDRVGTG SHAHHQA I+ L
Sbjct: 81 ENAEWRMFITIHDPAAPSNFIQLEIGVVDGSKAKGGHAINPFRAKPDGSTDATTFDCPSPSYHIMDRVGTGHHSHAHHQAKIDTSL 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig134.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig134.8.1 >prot_P-littoralis_Contig134.8.1 ID=prot_P-littoralis_Contig134.8.1|Name=mRNA_P-littoralis_Contig134.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=342bp GELPNPHRRILDEKEGVGTAKIWAIVMVNPSHAAPVNSTQTKINTFFQGQback to top mRNA from alignment at P-littoralis_Contig134:56338..58890+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig134.8.1 ID=mRNA_P-littoralis_Contig134.8.1|Name=mRNA_P-littoralis_Contig134.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2553bp|location=Sequence derived from alignment at P-littoralis_Contig134:56338..58890+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig134:56338..58890+ >mRNA_P-littoralis_Contig134.8.1 ID=mRNA_P-littoralis_Contig134.8.1|Name=mRNA_P-littoralis_Contig134.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1026bp|location=Sequence derived from alignment at P-littoralis_Contig134:56338..58890+ (Pylaiella littoralis U1_48)back to top |