Homology
BLAST of mRNA_P-littoralis_Contig133.96.1 vs. uniprot
Match:
D7FGW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW9_ECTSI)
HSP 1 Score: 245 bits (626), Expect = 8.640e-70
Identity = 131/207 (63.29%), Postives = 151/207 (72.95%), Query Frame = 3
Query: 267 MPLDTELHKSAHKGDIEGVMELVESGKIDVNEKGAQDRTALHRAAGANHVGIIHFLLQAGAPVDCPDRCRRTPXXXXXXXXXXXXXXXXXDSGGDLRLTTMTGMNPLMCAVQQSWFSVAEAILEWSAECAEGE-GTGGQMPSPAELCLTQDAEGKTALTVAKEKGDASMQKLLKPYAPKKAPISWCGCAG--KRRQLAAVAGPASGE 878
MPLDTELHKSAHKGDI+ V +LVE+G+++VN+KGAQDRTALHRAAGANHVGII +LLQAGAPV+ DRC RTP + GGDLR T++GMNPLMCAVQQ W SVAEAILEWS C E E G G +PSPAELC DAEGKTA+ AKE GD MQKLLK Y PK+ P +WC C G ++QL+AVA P + E
Sbjct: 1 MPLDTELHKSAHKGDIQSVRQLVETGEVNVNQKGAQDRTALHRAAGANHVGIIIYLLQAGAPVNTADRCLRTPLHWAAISGHLDATQLLLERGGDLRSKTVSGMNPLMCAVQQRWHSVAEAILEWSEGCTEDEEGVDGPVPSPAELCSATDAEGKTAVVFAKELGDVPMQKLLKSYIPKQ-PSAWC-CGGGAAKQQLSAVAVPPTAE 205
BLAST of mRNA_P-littoralis_Contig133.96.1 vs. uniprot
Match:
A0A6H5JFE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE8_9PHAE)
HSP 1 Score: 233 bits (593), Expect = 1.360e-62
Identity = 136/250 (54.40%), Postives = 160/250 (64.00%), Query Frame = 3
Query: 306 GDIEGVMELVESGKIDVNEKGAQDRTALHRAAGANHVGIIHFLLQAGAPVDCPDRCRRTPXXXXXXXXXXXXXXXXXDSGGDLRLTTMTGMNPLMCAVQQSWFSVAEAILEWSAECAEGE-GTGGQMPSPAELCLTQDAEGKTALTVAKEKGDASMQKLLKPYAPKKAPISWCGCAGK--RRQLAAVAGPASGE-----------GGDNTAAXXXXXSTTPGATARGAGGAGGVGS-GMWFRRLVCFVKC 1010
GDI+ V +LVE+G+++VN+KGAQDRTALHRAAGANHVGII +LLQAGAPVD DRC RTP + GGDLR T++GMNPLMCAVQQ W SVAEAILEWS C E E G G +PSPAELC DAEGKTA+ AKE GD MQKLLK Y PK+ P +WC C G ++QL+AVA P + E GD+ A S G+ G GG GS G WFRR+ F++C
Sbjct: 21 GDIQSVRQLVETGEVNVNQKGAQDRTALHRAAGANHVGIILYLLQAGAPVDTADRCLRTPLHWAAISGHLDATQLLLERGGDLRSKTVSGMNPLMCAVQQRWHSVAEAILEWSEGCTEDEEGVDGPVPSPAELCSATDAEGKTAVVFAKELGDVPMQKLLKSYMPKQ-PSAWC-CGGGAVQQQLSAVAVPPTAEEPTMAPGHSRQSGDDRVAAAAPVSNDVGSGKAVDGSVGGGGSSGGWFRRVCRFMRC 268
BLAST of mRNA_P-littoralis_Contig133.96.1 vs. uniprot
Match:
A0A6H5JSR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR0_9PHAE)
HSP 1 Score: 93.2 bits (230), Expect = 7.280e-19
Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 3
Query: 267 MPLDTELHKSAHKGDIEGVMELVESGKIDVNEKGAQDRTALHRAAGANHVGIIHFLLQAGAPVDCPDRCRRT 482
MP DTELHK+AH GD+ V +LVE G+I VNE GA +R ALHRAAG NHV I+++L++ GAPVD D+ RT
Sbjct: 1 MPTDTELHKAAHNGDLGKVKQLVEDGEIAVNEPGAAERRALHRAAGGNHVEIMNYLMEKGAPVDQTDKSGRT 72
BLAST of mRNA_P-littoralis_Contig133.96.1 vs. uniprot
Match:
D8LFE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE4_ECTSI)
HSP 1 Score: 90.5 bits (223), Expect = 5.690e-17
Identity = 42/68 (61.76%), Postives = 53/68 (77.94%), Query Frame = 3
Query: 267 MPLDTELHKSAHKGDIEGVMELVESGKIDVNEKGAQDRTALHRAAGANHVGIIHFLLQAGAPVDCPDR 470
MP DTELHK+AH GD+ V +LVE G+I VNE GA +R ALHRAAG NHV I+++L++ GAPVD D+
Sbjct: 1 MPTDTELHKAAHNGDLGKVKQLVEDGEIAVNEPGAAERRALHRAAGGNHVEIMNYLMEKGAPVDQTDK 68
BLAST of mRNA_P-littoralis_Contig133.96.1 vs. uniprot
Match:
A0A836CGQ7_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ7_9STRA)
HSP 1 Score: 88.6 bits (218), Expect = 2.660e-16
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 3
Query: 267 MPLDTELHKSAHKGDIEGVMELVESGKIDVNEKGAQDRTALHRAAGANHVGIIHFLLQAGAP 452
MP DTELHK+AH GD+ EL E+G +DVNE GA DR ALHRAAG NH G+I +LL GAP
Sbjct: 1 MPTDTELHKAAHNGDLAKCKELTEAGGVDVNEPGAADRRALHRAAGGNHTGVIEYLLSKGAP 62
BLAST of mRNA_P-littoralis_Contig133.96.1 vs. uniprot
Match:
A0A835YTH2_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH2_9STRA)
HSP 1 Score: 92.0 bits (227), Expect = 3.870e-16
Identity = 80/177 (45.20%), Postives = 102/177 (57.63%), Query Frame = 3
Query: 267 MPLDTELHKSAHKGDIEGVMELVESGKIDVNEKGAQDRTALHRAAGANHVGIIHFLLQAGAPVDCPDRCRRTPXXXXXXXXXXXXXXXXXDSGGDLRLTTMTGMNPLMCAVQQSWFSVAEAILEWSAECAEGEGTGGQMPSPAELCLTQDAEGKTALTVAKEKGDASMQKLLKPYAP 797
MPLDTELHK A+KGD+ G+ EL+E+ DVN GA DRTALHRAAGA + ++ +LL+AGA XXXXXXXXXXXXXXXXX ++T TG M A + + EA++ W E +M +L D EGK AL +AKE D ++ K +K AP
Sbjct: 1 MPLDTELHKCANKGDLAGIRELIETDGADVNALGANDRTALHRAAGAGQLEVLQYLLKAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPIVSTTTGTTAFMAAAGVNSLATVEALIGW----VEVHPDKYEM---RDLVGGVDNEGKGALQIAKE-ADPALAKAIKARAP 169
BLAST of mRNA_P-littoralis_Contig133.96.1 vs. uniprot
Match:
A0A836CN67_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN67_9STRA)
HSP 1 Score: 79.7 bits (195), Expect = 3.150e-13
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 3
Query: 267 MPLDTELHKSAHKGDIEGVMELVESGKIDVNEKGAQDRTALHRAAGANHVGIIHFLL 437
MP DTELHK+AH GD+ EL+E G +VNE GA DR ALHRAAG NHV +I +LL
Sbjct: 1 MPTDTELHKAAHNGDLAKCKELIEGGGAEVNEPGASDRRALHRAAGGNHVAVIEYLL 57
BLAST of mRNA_P-littoralis_Contig133.96.1 vs. uniprot
Match:
A0A482SYJ6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYJ6_9ARCH)
HSP 1 Score: 76.6 bits (187), Expect = 4.450e-13
Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 3
Query: 267 MPLDTELHKSAHKGDIE-------GVMELVESGKIDVNEKGAQDRTALHRAAGANHVGIIHFLLQAGAPVDCPDRCR 476
MP+D ELHK+AHKGD+E G MEL E ++VN+ GA DR ALHRAAGA H+ I H+ + GA VD + +
Sbjct: 1 MPVDNELHKAAHKGDLEVCKAILEGQMELEEP--VNVNDPGASDRRALHRAAGAGHLDICHYFFEKGADVDAVSKAK 75
BLAST of mRNA_P-littoralis_Contig133.96.1 vs. uniprot
Match:
A0A2R5GN98_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GN98_9STRA)
HSP 1 Score: 67.4 bits (163), Expect = 5.210e-9
Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 3
Query: 267 MPLDTELHKSAHKGDIEGVMELVESGKIDVNEKGAQDRTALHRAAGANHVGIIHFLLQAGAPVDCPDR 470
MP DT+LHK+A+KG+ V ++ IDVNE GA +RTALHRA + ++ LL GA VD D+
Sbjct: 1 MPRDTDLHKAAYKGNANAVRACIDEDMIDVNEFGAANRTALHRAVASGSTEVVALLLDRGAIVDIQDK 68
BLAST of mRNA_P-littoralis_Contig133.96.1 vs. uniprot
Match:
A0A0A9VX16_LYGHE (Ankyrin-3 n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9VX16_LYGHE)
HSP 1 Score: 55.8 bits (133), Expect = 5.300e-5
Identity = 34/75 (45.33%), Postives = 42/75 (56.00%), Query Frame = 3
Query: 267 MPLDTELHKSAHKGDIEGVMELVESGKIDVNEKGAQDRTALHRAAG--ANHVGIIHFLLQAGAPVDCPDRCRRTP 485
MPLD LHK+A KGD+ + E + DVN KGAQ RT LHRA G ++ I+ LL A + PD TP
Sbjct: 1 MPLDGVLHKAALKGDLGVIEEYLSQYPNDVNAKGAQQRTPLHRAVGGGSDKKSIVLLLLDYKADPNAPDINGLTP 75
The following BLAST results are available for this feature:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig133.96.1
>prot_P-littoralis_Contig133.96.1 ID=prot_P-littoralis_Contig133.96.1|Name=mRNA_P-littoralis_Contig133.96.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=352bp
MPLDTELHKSAHKGDIEGVMELVESGKIDVNEKGAQDRTALHRAAGANHV
GIIHFLLQAGAPVDCPDRCRRTPLHWAAISGHLDATKVLLDSGGDLRLTT
MTGMNPLMCAVQQSWFSVAEAILEWSAECAEGEGTGGQMPSPAELCLTQD
AEGKTALTVAKEKGDASMQKLLKPYAPKKAPISWCGCAGKRRQLAAVAGP
ASGEGGDNTAAAAAAGSTTPGATARGAGGAGGVGSGMWFRRLVCFVKCCG
TPGDRRNENWALSGPTVGDAGPSSSARSETAAAAAATGGKADESRGSTAT
ERGGGGGGGNRNIKAAGANNDIGTSLTLPASVEGVHTLGVVDRNGTGALA
M*
back to topmRNA from alignment at P-littoralis_Contig133:436781..449350-
Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig133.96.1 ID=mRNA_P-littoralis_Contig133.96.1|Name=mRNA_P-littoralis_Contig133.96.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12570bp|location=Sequence derived from alignment at P-littoralis_Contig133:436781..449350- (Pylaiella littoralis U1_48)
AGGGGGGTACACGGGTAAGATTATTAGTTAGGGTAGGGGGTAGTTGGTTG
GGTTATTGGTCGAGCACCTTATACCCCCTTATACCATGCTGTCCGGTCCG
GTCTACCAGACACGACAGGAGAGGGAACTGCTGCGGCGAGGCTGCCGTAC
CCACTGCTATTTCCTTCGAGGGTGGTGCTTGGCCAAACTCTCCGACGTGA
GCTATCCTATTTCGCATCTGGAGTCTGGCAAGCTGTATTCACCGGAATTG
TCGGTATCAACCAACGATGCCGCTCGACACGGAGCTCCATAAGTCAGCCC
ACAAAGGTGAGCGTGCCAACAAGGTTTTTGGACAGCAGTATCGGAGAGAG
AACGAGCGCCGTGTGTGGGTGCCGCTCGACGATCACCTGCACATGGGGTC
ACACACGCTGTAAACACTCCGGTCGAGTGTTGTATGATTGTATGCGTCTC
AAGATATATGTGGTATGCATACTGCTGTACTGGGTTTGTTTGCTGGATTG
TGTGGTATGATATACTCGGGAGTACGAAGTACTTCGTACGAAGTAGACAA
CAATGGAACGAGTTCCCGAGTTCTGCTGTATGATAGCAGTACAGCAGGTA
GTACCTTTTTGAGGGGAGGCCTTTGTTTGAGACGGTGCCACTGACTGTGT
GATTCACTTCGTTCAAATGATTTCTGGAGTCCTTGTCGTCGCGGCCTTTT
TTGAAAGAGAAGAATTTAGGGCAGTCACCGTCAAATGGTCTCCGTTGTTT
TTGAAACACCAGAGCGAAGAGATAGATTGTGCCGAGACCATCAGCGCCAG
CAGCACCAGCACATCACCATCGATGTACAAGTACAAGTACTGTACACGAT
CGGAAGAGCGTTCGAAATAGTTCCGAGAGAATCGAAGGAACCGCCGCACA
CATTCGCACGATTGGAATGACGGCGGCGGAGGGAATATATTCACAGACCG
GCAACAGTAGTACGATGACACAGAACATGCATTGAAATATATACGGAATA
TTTACTTCGGTACGAAGTAAATAATTAGAATAAAAGTTATACAAGTTACG
ATTTCGCTGATTGATCAGCATTTTCATTTTTCTTTTTTTTTATTCATTGT
GAATCACTTACAATTAGACTTGCCCTAGGCCGCTGACAGACCGGCATTTT
GTGCTCTAGAGCTCTCACAGGCAAGGAATGAAATCACTTGAAATTAGACT
ACGGCGGACCTCTGATTAGGATCATAACCGGCATTTTTTGCTCTAGAGCT
CTCACAGCCCAGGAATGAAATCACTTGCAATTAGAATACGGCGGACCTCT
GATTTCGATCATATGGCATCCATGAATCATTTTGGGTGTTGATTCCACTC
CTCGTGCAGGTGTTGATTCCATTCCTCCTGCATTGTTGTTGTTGTCTTCA
CATTAGAAACCATATCACTTGAAATTAGACCACGGCGGAACCTATAAATT
CGATCGTACGGAGATCGTTTTGGATCATTTATCTACCCCTCCCTGTCATA
TCCGATCACATTGGGTCGTTTTTCTTTCCTGCATCATCATAGGACGGAGA
TCGTTTTGGATCATTTACCTACCCCTGTCATATCGTATACTCCGTATGCG
AGTATCACATCAGACAGCTGCTCTCTCCACCTTTTTTTTGCTACGAGTAC
GATATTGTCATCATCACATCTTCTCATCTTTTCATCTCTGAACTCTGTCC
CGATACATGATATACAGACCACGACGGGGTACTGCTGTAGTACGGAATTG
CGAAATGATGACATCATTTCGCAATAAAATTGTCATCATCATCACATCTT
CTCATCTTTTCTTCTCTGAACTCTGTCCCGATGCATGATATACAGACCAC
GACGGGGTACTGCTGTAGTACGTGATTGCGAAATGATGACATCATTTCGC
AATTAGACTAGCATTGCGAGACCCCTAGGCCGCTGACAGACCGGCATTTT
TTCCTTGCCTGTGCACTTGAAATTTGACCACGGCGGAACCTATCATTTCG
ATCATCTTGGTCATTAGACTTTCCTTCCCTGTACTCATCAGGAGATTATC
CGCCAACGACAGCGGTAACAGACAGAACAGACTGTGCGGAAAAGCCCTAG
ATATTGGGTAATTTCGATCACATATTGGGCCGTTTATCATTCCTGCATCA
TAGGACGGAGATAGTTTTGGATCATTTATTTATCTACCGTCATATCATAT
ACTGGTACTCCGTATATATCCCAGCAGACAACTGCTCTCTCCGCTTTTTC
TGCTGTACGAGTAGGATATTGTCATCATCATCACATCAATCTTCTCATCT
TTTCATCTGCGCATACATATGCACATGAAATTAGACTACGCCGGACCTCT
GATTTGGATCGTTTGGCATCCATGAAACATTTTGGGTGTTTATTCCGTTC
CTCCTGCATATCACTTGAAATAAGAACACGGCGGAACCTTGCATTTCGAT
CATCTTGGGTCATTTGTCCTTCCTCTTTTCCTTTACATACAGTATCATTA
TATGATATTGGGTATAATTTCGATCACATTTGGTCGTTTGTTATCTTTCC
TGCATTATTGTAGGCTCCGGCTTCGAAGACGCAACAAGGTGTCTTCGTTG
AGTGTGGCACAATCTGGCGGGCTACGTACCACCTCCTGGCAATGTTTGCT
GTTTAACATATACTTCAAGTATTATATATAGTCTTGCTTACTAAATAAAA
TTGCCTCCAACCTCCCCACCCACCCGCTTGCGAATTCTCGACATTTAACC
CGCACAGACAGCTGTAATCGTCAGTGATCCGTACTCCTCCCCCTTTCCCT
TCTTCGCCGGTGTTTATAATACTCGGGAGTTTATTATTTTTTCCTTTCCT
GCTGTAATACGAAAGGGGTTTTAGAGTGCTTAGCCCTCGGGAATTACCAC
ACATGACTTGCCTTTTCCCTGCAGTAGTACACTGCATGCAGCAGGTAGGT
ACTACTGTTGTACGCGTGTGCGTCGGTTGTGGCATTTACTGCTGCTGTGG
ATTATGTACGTGCGATTACTCCGAGCGTTTGTTTTTTCGTTTTACTTTCG
TGGGATTGTTTGTTTTTTCGTTACAGCGGCCCGGGACTCTTCTTTCCTTT
TTTCCGTTTTCTTTCATCTTCACAACGAAATAAATGTATACGAAGTATAT
GTATGTATGTAGTATGTGCCATTTTCGACCCCGTGTATCGTCGACATGTT
CACCAGGCCATGTCCCACCATCACGCCTTCCGCGTGCCTCTATATCTTGG
ATTCGGTCAGGACCGTGGCGGCGTCAGCCGCCGAAACCCTTGTATCATAT
ACGAAGTACTTCGTACTTCGAAGTACGTACAGAATATGTGTGTGTCATCC
CTTTCATTGGACGCCACTCTACACCTTCCGAGTAGGTAGACGCTCCAACC
GGGGTCACACAGGGGGAAGTCAACACAAGAGTTTTTTTTTTTTTTCTCTG
CTTCCCTCTGCGGTGCTTGCCTTTTTGGTTGAGCTTTTATCGCGAGAAAG
GGGACAGCACTTCCTTTCCCTCGTCGATGGTACGATCGAATTTTGTTCAC
CCACGAATTGATCGCTTTCCACTTTCACGCGCAATGTGAGAAAAAGCCCC
TGATCGTGTTACTGCAGTGGGATTCGAACTCACGCGAGAATGTCAGAAGG
TTACGTGGATAACCAACTGAACCACCGGGGCGACCGTACGAGTACCAGAG
AGTATCAGACAGCAGATCGTTATAGGAAATGTGTCCAGCAGTAGTTCTGT
GACAAGTAGAGTACTACTCTAGTACTTTGTTACCAGGTACGGAGTATGTC
GTATTATATCACGTCATTCGTGCTCGTATACCAAATGTGTCTACAAGTAT
CATACCGTTCTACCGGCACGGCACGTTTACAGCAGTAGTATCCCCATCTC
CTCGTGTCGAAGTCTCGCAACCTAATGCGTATACTGCACGTCGTATACTG
GTCATCTGTACGATACGAGTACTGCTGTAACATTAGTACACAACTTACTT
GTATGGTAGAGCAGCGGACGTGTTGCGTGTGGTTATTGTCACTGCTGTAT
TTGGAAATATATACAAGTAAACGTATGTATATAATACATACAGTATATAC
AAGGTTCCCCTTCGGGAGGCTGGTACGTGTCTCTCCCGGGGCGAATCAAG
ACATTATTGAAGTAATGCGCTACTATTTTGTTGTACCTGAATGTTCGGCA
GTTGGTACGAAGTAGTTCGAAGTTAGGTCGTGATCCGATGTTGTACAATT
AATTTGTTCGGCGGCGCGATCTCGACGAAAGGTGGCGTATGTGTGCGAAT
CTCCCAAGAACAAATTCCCAAATTCCCAAATTGAAATTCTCAAATTCGAT
GCTTTCTATTTGCCATACTGTAGATATGTACACCTAACTGCTGTACTGCT
GCAGAAGTTGTCTGCATCACAAACGTCTACCTTGTTGTTTCTCTCATGTT
TGTGCCGAGGCGTTGTGAGGGGGTTGCATATGAGTGAACAGGTCTGTTAC
ATTTGAGGTGTTCGTCTTGAAATGTTCATGAGTGTGCAGCTTGCTTCTAT
GAGAGATTTGAAAAGAGCTGTGGTGGCGGTTGAATGCTGGCGCACACGAG
GAGAGCGGGCCGAAGGTATACAGTATGGTAATAGGGTTAGGTAACGCACT
TGAGTTTATCAAGTGATTCGATCTGCCGCGTCCTTCTCGTAATTCGAGAG
CAGGCGTTTTTTATCCGGGAAGCGGGGTTATTATGCCACACGCAGACCGC
TTCAACAGCTCACAGGCTCACGAGTGCTGCAGTCACCAGGCACGCAAGCA
CAGTTCTACATGAACCTGAATCGTGTGCTGCTTCTAACGGGATTGGGAGC
TCTGAGAAGTACGGTGGGTGCAGATATTCAAGAAAATGTGACCAGATTTT
AGGTCTGAAATAGTCACATTTCGACCGCTCCAGGTCGGTACTCTACCCCA
TGCTCGGGCTACGGAGGTGCCAATAAGCTCCCACTAGGCAAGCGTGCAGT
CACGGTGTGCATCAAACTATCACAAGTTGTAGCTTGGAAAAAGACGGTCC
ACAGCGAGAATGCATAGTCGATGAGTGCCGTGAGATCTTGCAATCGTCCA
CAAGCATATGATATGACTGAGTAGGTACAGGAGTCCAGAGCCGAGGGTAA
AAAAAAACTTGTTTACCTTTTTTTTTTTACCCTCTGCTCTGGACTGCTGT
GCTGTAGGATACATTATATCAGTCAGTCATATACACCGGATCATCCTTGT
AGACGATCACAAGATCTCACGGCACTCATCGACTATGCATTCTCGCTGTG
GACCGTCTTTTTCCAAGCTACAACTTGTGATAGTTTGATGCACACCGTGA
CTGCACGCTTGCCTAGTGGGAGCTTATCACCTCCGTAGCCCGAGCATGGG
GTAGAGTACCGACCTGGAGCGGTCGAAATGTGACTGTTTCAGACCTAAAA
CCTGGTCACATTTTCATGATTATATGCACCCACCGTACCTATCAGAGCTC
CCAATCGCGCGAGTAGCGGCACACGATTCGGGTTCATGTAGAATTGTGCT
TGCGTGCCTGGTGACTGCAGCACTCGTGAGCCTGTGAGCTGTTGAAGCGG
TCTGCGTGTGGCATAATAACCCCGCTTCCCGGATAAAAAACGCCTGCTCT
CGAATTACAAGAAGGTTTTGACCGAGGAATTTCGCTATCCACTTGAAATT
TTTCCCAAGTGCGTCACCTATCCCCATTACCATATACCTTTGGAGCGGGC
CGCGGGCCATTTGTGTGTGGGTTTCGACTTGCTTCGGCGGGCTTTCTCTG
CCCGGAAAGCGATCCCGCGAAATAGAGCCAGTCCCGGCACCTTTGAGCGT
TGAGAACATGGGCCACCGATGCCGGGCGACCCCCGGACCTGCACGGTAAT
GTACCGACGGGTCTCCTGCGTGCTCCAGCAAAAATCGCGAGCAAAGAACC
GCTGCCAGCGGAGAAATGTATGCCCAAGCATGAAAAATGATTAAATGATA
CGTATACATGTATACTTCATGCTTCGTACTTCGTACATTCGATAAGTACT
TCGTAATACTCATGGAATACTTTGAGTTACATACGTATCGGTACGGATAC
ACCATATAATCTGATACACAGTAGCTGATAGCCCTTCTTTTTTATGTTTC
TTTCTTTTTGCAAGATGATCGGAGCAGCATCAATCGAGTTTATTACTTCG
AAGCAATAAAAGGCAGCGAAGGAAGGCCAAGGCCGCGGCGAGAGTATGAG
ATACAACAGCAGTACTCTTTTTTACAAGTATCCTGCATGCGGCCATCCTT
CATGCTCATTCTCGTTTTCCGCCAACCCAAAAATGCTGTTGCTGCTTTGC
GGGGGTTGACGCTGTACCTCGGCCTCTGTCAAAATTCTATTCCCTGGCGA
TAAACGATGTCCGGACTGCAGGGGACATCGAGGGCGTGATGGAACTTGTG
GAGTCGGGAAAAATCGACGTCAATGAGAAGGGTGCCCAGGACCGAACAGC
CTTGCACAGGCAAGAAGTGCTCCCACATTTAAGCCGAGTAGAGTACGAAT
AAGCACAGCTGTGAGTGAACGGCGTAGCTGCTGGTGAGGGTGTTCCATGA
TGTAAATTAAGCGCCTTCAGTCGTATAGTAGCGTACTACTGCTGTGGTAG
TGTGCAGCCGCGGTAGTGTTGTCTCACCAAATCGTCGGACGGTGTCGATC
TTTACACGTCATTGCGTTCAAGTGGAAGTGCCCTGTCGTATGAAAGACGC
AGGTGGTGTTGTGGTGTGGTGGTGCCGCACGTTTGGGCACCGAATGGCAT
GGACACCAGCGGCCGTGATACATTTTTGCACTCCTTGCGGCCATCAAACC
CAAGACAGCTGCTTCATTTTTTGAGTCAGTGAACCCTCGTTGTTCCGTCG
TTGGCTTGTACTCGACAACAGGGCAAAATACCATCCGCGGCACTGACAAG
GAAGGCTTTCATGTAACCCCCCCCCCCCCCCTCCGCGTCCCCGCTTCAAC
GCCTCTTGGGATGGCAACACCTGCACCAACGTCTTCAGGGCTGCGGGCGC
CAATCATGTCGGCATCATCCATTTCCTTCTGCAAGCAGGGGCTCCCGTGG
ACTGCCCGGACAGATGCCGCAGAACGCCGCTGCACTGGGCTGCCATCAGC
GGCCACCTCGACGCTACCAAGGTATGCTGCCACAGTTGCCACAGCATTGA
TCTGCGACAACGGTGCGCCTCATGAAATGAACACTGATGTCTGTTTTTGT
TTGGTCAAAATTTGTGAGCGAGGTAAAGGAAAAATGCTTTTACAACCGGT
TCTGCTTTTAAACTTCGAAGAAATGTATATTTGCGCCCGTCCATGTTGAT
AGTGGTGCGTGCCCCCAGTTCAACCTTAGTTGAGTTCCTGTTCAGGTTGT
CAGAGGAGAGGACAGGAGTGGGTAATCCGATCTGCACGACTCGATCATTT
GACTGTTGGCTTTCCCGCCGACTATCGTATCAAATACGTTTGGTGAAGCT
CTGAAAAACGGGGAAGGCAGATTATTGTTTTGCCCCTTTGACAACGCGGG
GTCAGCCTGTGCTTGTCAAAACAAAATACAAAAGGTTCGCTGCTGTTCAT
ACATGTTTTCTCGCTGCGATGTATCTCCTGCTCAGGTGCTGTTGGATAGC
GGAGGCGATCTGCGGTTGACAACCATGACCGGCATGAACCCTCTGATGTG
CGCTGTCCAGCAAAGCTGGTTTTCGGTGAGCCCAACAACACGCACCGCAT
AAGTATAGCAATCGTGGGTTGGCCCACCTGCAAAGTGGAACATTGTGACA
GGGCGCACAAAGCTAGATCTGCGTGAAACCGCCCCACGTCGTCAACATCC
ACGTACAAAAATTGCAAATTTGCTTCGAGAACGAAAGCTGTTTGGGCCTC
CTGAAAGTTTTTTGGTCGGGTATGGCATGCTACAGAATTGGAAAATAGTT
CTTTGATCACATGGAGCGAAGGGGAGCAAGCCTAAACTTTGCTGTGTCGT
GTGTATGGATGGGTTTCGCTTCCGTGTTGAGGGACAGACTTCGAAGTACG
TGTGCTATTCCGTCGATAAACCGCCGGACTAGCAAGAGGAGGCCCTTGAA
GGCTGTACGTTATAACTACGGCTCAGTGAGAGAACGGCAGGCAGACGACA
GCTGTTAAGCTTACTGTGTGTCTCGTTGTCGCGAGTACAGCTCTGATCCA
TTCATGAACAGCTTGCGGCTGTTGCAATGGTTGCCACGCTCTTGCACTAC
TGTTGACGCGTATTAAGTTTGACCGCGGCTTCGTGTTCGCTGCAGGTCGC
AGAAGCCATTCTGGAATGGTCGGCCGAGTGCGCCGAAGGAGAAGGGACGG
GAGGACAGATGCCGTCCCCCGCCGAGTTGTGCTTAACTCAAGACGCCGAG
GGGAAGACCGCGTTAACGGTCGCGAAGGAAAAGGTGAGGCTCCGACTGCG
GTGTGTTCATCGCTCGGAGATTTTTGATGTGAGGGAGGCGTTTCTTCGCT
TTGAGGTATTTGGTGCAGAGGGAGCTTCGATAGTATTGCTTGTGTATTTA
GCAATGTGAAAGTTTTCTGCTCACGTCTTATACTCGTTACGTGGTATCAG
AAAGACATGCTCTTCCTTTGCCACCATATCTGCATTGCAGTTACGCCGAT
GATTGAAGAGGGGCCGACTACCAAGCTCTATATTAAAGCGCTGCCCCGCC
CGTCACCCTTTCCCTCGTCTTGTCTGTCTTACTTTCAATCGCCCCACTCA
AAACCTCGCCGCCAACTCGCCTGCTGTGAAACGTTGCTGTCCACTGCTCA
ACTCAGGGCGATGCGTCGATGCAAAAGTTACTCAAACCGTACGCCCCGAA
GAAGGCGCCAATCTCGTGGTGCGGCTGCGCGGGCAAGAGGCGGCAACTCG
CCGCGGTAGCGGGTCCGGCGAGCGGCGAAGGAGGCGACAATACCGCCGCC
GCTGCCGCCGCTGGCTCTACTACTCCTGGTGCTACTGCTAGAGGGGCCGG
TGGTGCTGGGGGCGTCGGTTCGGGTATGTGGTTCCGTCGACTGGTCTGCT
TCGTGAAGTGCTGCGGGACGCCAGGCGACAGGTGATATTTTATTTGGAGA
TGGATCTACGGCTGTCATGCGTTGGTTGGGTGTTGTTTGCGGTGAGAACA
TCGACCGCGTAACGAAGAGCGATTTGTTTTGGTGCCTATTTTTGATGCCT
GCGAAGAGAGAGAAAAAAAAGGTGCCCGCAGTTTTCTGATTTGTAACTGA
CGTCGCTTCACCAACGTCGGTACATGATATTCTACATGGAGCACAAATCA
CGTCCCGTTGGCCGTTTCCTTTGGCGTTGCAGGCATTATGTCGCCGCCGT
TCCGACAGGTTATACAAACGAAACTGTACGGTGGCGGCGATGCGGTAACA
GCAGTCGAAGTTTTCTCAAGCACGTGTCTCGTCGCACGTGAATTATGTGG
TGTGTATACCTCGAATTATCAATGCATAAGTTACATTCGAAGCAGCCTCA
CGAGGCATACCCAAATCATGACTATCTTTTCTACTTCGTATACCATTTCG
GACGTAGGAGAAACGAAAACTGGGCTCTCTCCGGACCAACGGTAGGCGAC
GCAGGCCCTTCGAGCTCGGCGCGTTCCGAGACAGCAGCGGCAGCTGCCGC
CACCGGTGGCAAGGCCGATGAATCTCGGGGAAGCACCGCCACTGAACGCG
GCGGCGGCGGCGGCGGCGGCAATCGAAATATCAAAGCTGCTGGTGCCAAC
AACGACATCGGAACCAGCTTAACCCTGCCGGCCTCCGTCGAAGGTGTACA
TACTCTTGGCGTCGTCGACAGGAATGGGACCGGGGCGCTGGCCATGTAGA
GCGGTAGCGCGAGTGGAAATGGGGCGAGGGAGTCGCCTGACAGCAGCAGG
AGGTGTCGTGAGCGTCGCGAAGGAGTGGGCGAGGGGGGCTCCGTGGAAGA
TGAGCCGGCGGAGCGGCGGTCGCGGGAGTCAAGAAGCGGTAGCGAAGGGG
GTTCAACGTGGAGTTCGAGCAAGGACGAAAGCGCAGATAGGGTCGGATGA
GTCTCAATGCAGGAAGGTGGAAGGCGGTGGCGGCACTGTTTCTGGACGGT
ATTACGGTCCTTCTTCTCTCAGATCGCCTCCCAACGGACACGTCTGGCAT
CCGCAAGTAACCCGCAGTCGTCCAAGGTCCAACTTTTGTATTGTTGGGTG
TAGGGTGGGGCTTTCGGGTGTAACTGCCGTTGTTGTGACCCGCCCACCTG
ACAAGACAACTTTCCTGTTGTCACGAGTGCGTGAAAAAGGTACATGTAAA
CGCCCCACCTCTCCCAAGCTTCGTAGTGTCATCCTGACGAGTTTGATTAC
TGCTGTCGTTCTCCACGCTGGTCGCTGCATACGATCAACGATATGGGTCG
ATTAGGCATAGCTCGAGGCGTGCAGGAAAAAGGCGATGGGTCAGAGGGTG
TCTCTTTTTATGGATACGCAACGGCGGTGATTTCGCTTTCCGTCGGGGCC
AGTGGGAAGCTCACCGCTTTTGGTGGTGGCGTGCGCGACAATGTGACGGT
GTTGAAAGACTTCCGTGACTTGAAGCTGGTGACGATGGTCTTGCCGGTAG
GGCAGACCTGCTTGTTGCCTGCAGCTCAAAATTTCGATCGAATGTAACTA
AAACGACAGCGCAGGTTTGGGGGACAAGTTTAGCAGCCTTGCCGTGAAAT
GTTTGAGCTTGCACACGTGGTACATACTGAAAAGGCAATGGAGATAGATG
CGACTTGACCTCAGGAAAGCAAGATACTGTTTTCAGTGCCGAAATGCTGT
TGTTGTGTGGCTTGTTGGCTGTTTGTTGCTGTTGTGGGTGTTGATAGTGT
GTGATGTAGCCGGTGCACCATTTGGCGGGAATTACTCTCACTTCGCTGGT
GTTATGTGTGCTTGGTTGTACAGCAGTGGTCAACAATGATGTTTTCTGGT
AACGCGAATCACTACCGTGGCACTTCTCAGGTAGACTACAACGAGGGCGG
GGGTGTTTCGGGTCAGATACCTCTTTGAATAAAGTCATCGTTGAATACGA
CAAGGTGCATCTTGATTCCCTAGCTCTTGGTGATTGTGGTCACTGCTGCT
CGTTTCTCAGGTAGACTACAAGGTTGACCATTTCCCAAAAGCTTCTGTCG
AGTCAACGTTGGCATTAAGACTATTACTTTTGCGTAGTACCTCTCTTCAC
ATGTTCATACCTCAAAATAGTATTTTGCCACACGAGGCGAATTTCGCGCC
CCGAGTTTCGTGAATTGTCACCTGTATTTTCTCCGTGCCCGCATGGGCCA
GGACTGATGTTGTAGGGTGGCAGCGATTGCGAGGGCAAGGGTATCGGTCG
GGAGGCGGCATCGAGTGGGCGAGAAAACTGCCCGCGCGCTTTGCGGCGTG
CGTCACTGCTGTAGGTAAAAGTGTCTATCTTTCACTCTTTTTACGGTGTA
GGTTTTGGTGTCTCACTGTTGTCAAGCTCAAGTTTTGTGCATTGCTCATG
GGTTTCTCCGTGCTCTCTCCTATTTGCAGGCTTGTTTTGCTTGGTCTTGG
AGAAGGAAGCGCCTCCGTTTTTTCACATGCATGCGAAATTTGTGCCGTGT
AGAGCATGCCTTGTACCAGTAGTTGTTTGAAGTAAAAAGTCGCCGCAGTC
TCTTGGCTGCGAATCCTCCTCTCACAACGCCACACCGTTGTCAGCCCCTG
TTTGTTTTGGGTACGGTACAGTGGCGTTTTGGAACGCCCGATTTATTTTC
TTTGTCAAGAACGAATCAAAGATATGGGTACAGGAGGATTTCGCCCCAAA
CCGTTTTTTGTCCCGACTCGAAAACTCGCTCGAGAGTCGCAGTAGTTTAG
ACTTTTCCTACGTAGACTTGCTTCCGGAGTACGCATCACGTACGGCAAAT
TAGAGGGTATCAGCTAGACCGCGGGGTCTTGTATTTGTTGTATCATACTA
GCGGCAAGACTGCTCGACCAGAGTGTTCTGTAATCATCTGTGTAACATTC
GGAGTTTTTTTCTATTTTGGATGTGTATAGGTGGGTGTAGCATTTGGAAT
GCGTCGACATACCAGGCGTTTCATTCCAAACCTTGTTCCAGTTTTTTTTT
GTAGTTGCTCTTCTAGCCTGATTTCGACACTTTCATGATATCCTCCGTGT
GTGGCATCGTCAGCGTTGCTTCGGAAAACAATAATGATTTCAGCCTATTC
AACTGGTACTCTAGCACGTTGTAGTTGTAAGATTTTATGAAGAGGGAGAT
ATAGGCACTACCTTTCTTTCATCTTTAGTCAGTCGCTCTCAAATCGACGT
TACTTTTGCCGAGGTTGCAGGTTCGGTTTTTATGGTGTAAAAAAGGTTCT
TCACGAATTTTAGTTTTCGTGTGTGTGTGTGTGTGTGGACTTTGCTTTTC
GTGTACGAGGTTTAAAAACAGGACGAGCGTATGTGGGTTGCATCACGTCC
TCCCGTTTTCCACAGGATACCACGTCATTCTGGAAAGTCTGTTTCCTTCC
TCTGCTGGACGTTGTTTTGTCGGAAATACTCCTCAGGGGTTTGTCGATGG
ATCTCAATCGATACTTTTCC
back to topCoding sequence (CDS) from alignment at P-littoralis_Contig133:436781..449350-
>mRNA_P-littoralis_Contig133.96.1 ID=mRNA_P-littoralis_Contig133.96.1|Name=mRNA_P-littoralis_Contig133.96.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1056bp|location=Sequence derived from alignment at P-littoralis_Contig133:436781..449350- (Pylaiella littoralis U1_48)
ATGCCGCTCGACACGGAGCTCCATAAGTCAGCCCACAAAGGGGACATCGA
GGGCGTGATGGAACTTGTGGAGTCGGGAAAAATCGACGTCAATGAGAAGG
GTGCCCAGGACCGAACAGCCTTGCACAGGGCTGCGGGCGCCAATCATGTC
GGCATCATCCATTTCCTTCTGCAAGCAGGGGCTCCCGTGGACTGCCCGGA
CAGATGCCGCAGAACGCCGCTGCACTGGGCTGCCATCAGCGGCCACCTCG
ACGCTACCAAGGTGCTGTTGGATAGCGGAGGCGATCTGCGGTTGACAACC
ATGACCGGCATGAACCCTCTGATGTGCGCTGTCCAGCAAAGCTGGTTTTC
GGTCGCAGAAGCCATTCTGGAATGGTCGGCCGAGTGCGCCGAAGGAGAAG
GGACGGGAGGACAGATGCCGTCCCCCGCCGAGTTGTGCTTAACTCAAGAC
GCCGAGGGGAAGACCGCGTTAACGGTCGCGAAGGAAAAGGGCGATGCGTC
GATGCAAAAGTTACTCAAACCGTACGCCCCGAAGAAGGCGCCAATCTCGT
GGTGCGGCTGCGCGGGCAAGAGGCGGCAACTCGCCGCGGTAGCGGGTCCG
GCGAGCGGCGAAGGAGGCGACAATACCGCCGCCGCTGCCGCCGCTGGCTC
TACTACTCCTGGTGCTACTGCTAGAGGGGCCGGTGGTGCTGGGGGCGTCG
GTTCGGGTATGTGGTTCCGTCGACTGGTCTGCTTCGTGAAGTGCTGCGGG
ACGCCAGGCGACAGGAGAAACGAAAACTGGGCTCTCTCCGGACCAACGGT
AGGCGACGCAGGCCCTTCGAGCTCGGCGCGTTCCGAGACAGCAGCGGCAG
CTGCCGCCACCGGTGGCAAGGCCGATGAATCTCGGGGAAGCACCGCCACT
GAACGCGGCGGCGGCGGCGGCGGCGGCAATCGAAATATCAAAGCTGCTGG
TGCCAACAACGACATCGGAACCAGCTTAACCCTGCCGGCCTCCGTCGAAG
GTGTACATACTCTTGGCGTCGTCGACAGGAATGGGACCGGGGCGCTGGCC
ATGTAG
back to top