mRNA_P-littoralis_Contig132.55.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig132.55.1
Unique NamemRNA_P-littoralis_Contig132.55.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Match: A0A6H5JIQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ5_9PHAE)

HSP 1 Score: 432 bits (1112), Expect = 5.110e-143
Identity = 228/376 (60.64%), Postives = 270/376 (71.81%), Query Frame = 1
Query:  499 VVPLAIGEVPKSLRDHPNRKTTVAFQFHVLDDGQPLPTY-SWASVLFPLVVGYVDLGTDVAAVVSYYEAGHAWWFALGMVFIVGPALFAGCVVVRGTDNLVLFGRCCIVFHLGLLWEAFVSAVTSSYSHTLVTLKLVEALYESTPQLMLQFYVLLLEWGGEGAQWPFWRIFSVVWSGFTLAYTTTGLVVEYPLSQRPPGAEGSTARCPSLTSKIFSGVPTDGSVEVYGSRWHPQNFVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISRSIILRHL-------RYRSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEGKAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFKR 1602
            V PL  GEVPKSL DHPNRK   AFQFHV +DG P+P Y SW SV   LV+GY D+GTDV AVVSYY+A H WWFALGM+FI+GPALFA  V++R    L    R  +   LG+L+ A VS  TSSYS  L +L+++E LYES PQLMLQ Y LLLEW  +G  W   R+ S+++S F+LAY TTGLV E  LS+  P A+ ++A CP LT  +F  VP + SV VY SRW+ Q FVWAFL YQ LEIG++ +SL LLALV RAYFFL L WLW SR+ +LR L       R RSQ RLVGMPFMDS+MD L++YDVGCALTTVEFV   +I N FY +E G+ P  V RVWTYVAAVCMVGKL LG+L+VRPFKR
Sbjct:   23 VAPLVTGEVPKSLLDHPNRKGG-AFQFHVTEDGAPVPGYKSWKSVGIQLVLGYADVGTDVDAVVSYYQADHMWWFALGMIFIIGPALFAAIVLLRREHWL---RRVLVALQLGMLFGALVSWGTSSYSPVLASLRVMEPLYESVPQLMLQLYGLLLEWDNDGTMWLSRRLLSILFSCFSLAYATTGLVAEQALSRLAPTADAASASCPGLTGLVFGAVPANSSVAVYRSRWNSQKFVWAFLFYQVLEIGAKFISLGLLALVWRAYFFLALFWLWGSRAYVLRRLIAGEHSLRVRSQFRLVGMPFMDSVMDVLQTYDVGCALTTVEFVFCLTIGNMFYTDEGGQLPTDVGRVWTYVAAVCMVGKLCLGYLIVRPFKR 394          
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Match: D7FJQ6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ6_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 4.500e-70
Identity = 155/377 (41.11%), Postives = 223/377 (59.15%), Query Frame = 1
Query:  517 GEVPKSLRDHPNRKTTVAFQFHVLDDGQPLPTYSWASVLFP-LVVGYVDLGTDVAAVVSYYEAGHAWWFALGMVFIVGPALFAGCVVVRGTDNLVLFGRCCIVFHLGLLWEAFVSAVTSSYSHTLVTLKLVEALYESTPQLMLQFYVLLLEWGGEGAQWPFWRIFSVVWSGFTLAYTTTGLVVEYPLSQR--PPGAEGSTARCPSLTSKIFSGVPTDGSVEV-YGSRWHPQNFVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISR----------SIILRHLRYRSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEGKAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFKRE 1605
            G +P SLR+H N +    F F V + G P+P +     L P LV+GY+DL TD+A V+SY+ +G   WFA+G+ FI GPAL AG  V+R  +  V  G       LGL+ E  +S    SYSH LV L+++E L++S P L+LQ +VLL+       +    R+ SV+ S  +LA  +TG+V E+PLSQ     G +  TA+ P  +S  F  VP  GSV V  G + HPQ+FVW FLLYQ +EI SR++SL ++A+ +  YFF +L+WLW+SR          S++   LR+R  +R    P MDS++D +K+Y V C  T VE   F ++ N     +E +A D  RRV++ ++ + M GK+ALG  +V PFK +
Sbjct:  264 GGIPLSLRNHRNFRR---FVFAVPEHGAPIPPWRSKRSLIPALVLGYLDLFTDLATVLSYWRSGLTLWFAIGVAFITGPALCAGAYVLR--EKTVGRGIAAAT-QLGLIVEGLISVKEESYSHALVALRVLEPLFQSLPMLLLQTHVLLVS-----EECLALRVVSVMVSTLSLAVASTGIVAEHPLSQLRWSRGVKYPTAKLPLASSMFFGTVPFAGSVCVRMGFQLHPQDFVWWFLLYQLMEIISRVLSLGVIAMPLGYYFFCLLAWLWLSRTFIACVSIGDSVVREKLRFRKLIRFAAAPIMDSVIDRVKAYKVSCFFTCVETACFLAVGNALPHADETRASDLTRRVFSVISLLAMGGKIALGTALVVPFKAK 629          
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Match: A0A6H5JJ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 8.950e-56
Identity = 129/353 (36.54%), Postives = 192/353 (54.39%), Query Frame = 1
Query:  592 DGQPLPT-----YSWASVLFPLVVGYVDLGTDVAAVVSYYEAGHAWWFALGMVFIVGPALFAGCVVVRGTDNLVLFGRCCIVFHLGLLWEAFVSAVTSSYSHTLVTLKLVEALYESTPQLMLQFYVLLLEWGGEG--AQWPFWRIFSVVWSGFTLAYTTTGLVVEYPLSQRPPGAEGSTARC----PSLTSKIFSGVPTDGSVEVYG-SRWHPQNFVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISRSIIL-----RHLRYRSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEGKAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFK 1599
            +G PLP      +++  ++ P+++GY DL +D+   VSYYEA H  WF LG+ F +GPA+      + G      F R  +   L LL EA ++   + YS  L  ++++  L+ES PQL+LQ + +L  W      +    WR+ SV  S  +LAY  T +     LS    G +G   R     PSLT  +FS VP +G+  + G    HP++ VW  L+Y  LEI +R V LA+L  VVR +FF VL +LW+ R +I+       L +R  +RLV MPF+DSIMD   ++ +G  LT VEF++   +  + Y N++   P   R V   VA+ CMVGK+ L ++ + P K
Sbjct:   49 NGPPLPAVRDPLHAFKILIVPVILGYADLASDLYTAVSYYEAKHFVWFGLGLFFALGPAVIMSAFCLSGVG---WFRRFLVATQLSLLAEALITLQKADYSPVLALVRVIGPLFESVPQLLLQLHAMLWLWTETSFASSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGMDGERFRLCPCFPSLTGVVFSRVPAEGTSSLRGVGDVHPRSHVWLCLVYHVLEIFARFVPLAMLVQVVRGWFFFVLVYLWVGRGLIVWMTAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLVLTLVEFIV-CMVIYHVYMNDD--LPSRARLVLVTVASCCMVGKMCLAWVAISPLK 395          
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 2.100e-55
Identity = 131/353 (37.11%), Postives = 196/353 (55.52%), Query Frame = 1
Query:  592 DGQPLPT-----YSWASVLFPLVVGYVDLGTDVAAVVSYYEAGHAWWFALGMVFIVGPALFAGCVVVRGTDNLVLFGRCCIVFHLGLLWEAFVSAVTSSYSHTLVTLKLVEALYESTPQLMLQFYVLLLEWGGEG--AQWPFWRIFSVVWSGFTLAYTTTGLVVEYPLSQRPPGAEGSTARC----PSLTSKIFSGVPTDGSVEVYG-SRWHPQNFVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISRSIIL-----RHLRYRSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEGKAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFK 1599
            +G PLP      +++  ++ P+++GY DL +D+   VSYYEA H  WF LG+VF +GPA+      + G      F R  +   L LL EA ++   + YS  L  ++++E L+ES PQL+LQ + +L  W      +    WR+ SV  S  +LAY  T +     LS    G +G   R     PSLT  +FS VP  G+  + G    HP++ VW  L+Y  LEI +R V LA+L LVVR +FF VL +LW+SR++++       L +R  +RLV MPF+DSIMD   ++ +G  LT VEF++   +  + Y++++   P   R V   VA+ CMVGK+ L  + + P K
Sbjct:  396 NGPPLPAVRGPLHAFKVLIVPVLLGYADLASDLYTAVSYYEARHFVWFGLGLVFALGPAVIMSLFCLSGIG---WFRRFLVAAQLSLLAEALITLTKADYSPVLALVRVIEPLFESVPQLLLQLHAMLWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGKDGERFRLCPCFPSLTGLVFSRVPAQGTSSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLLLVVRGWFFFVLVYLWVSRALMVWMAAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLGLTLVEFIV-CMVVYHVYKHDD--LPSRARLVLVTVASCCMVGKMCLALVAISPLK 742          
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Match: D8LFI4_ECTSI (Leucine Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 4.780e-55
Identity = 145/385 (37.66%), Postives = 204/385 (52.99%), Query Frame = 1
Query:  517 GEVPKSLRDHPNRKTTVAFQFHVLDDGQPLPTYSWAS-----VLFPLVVGYVDLGTDVAAVVSYYEAGHAWWFALGMVFIVGPALFAGCVVVRGTDNLVLFGRCCIVFHLGLLWEAFVSAVTSSYSHTLVTLKLVEALYESTPQLMLQFYVLLLEWGGEGAQWPFW--RIFSVVWSGFTLAYTTTGLV-VEYPLSQRPPGAEGSTAR------CPSLTSKIFSGVPTDGSVEVYGSR-W-HPQNFVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISRSIILRHLRY--------RSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEGKAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFK 1599
            GE+PK L +HP  K  +  +     DG PLP  + A      ++ P+ +GY+DL +D+   VSYY +GH +WF L + F +GPA+      +          R  +   L LL EA  SA + +YS  L  ++++E L+ES PQL+LQ Y +LL W            R+ SV  S  +LAY  T +  VE  L+ R  G EG T R      CPS+T+ +FS VP  G   + G   W HP+  VW   LY  LEI SR V L ++ALV+R +FFLVL +LWISR +++    Y        R ++R+V MPF+DSI+D  +++  G  LT VEFV  A I  Y   + +   P   R   T ++  CMVGK+ L  L + P K
Sbjct:  158 GEIPKRLAEHPRFKKFIVGRAM---DGPPLPHVNDAGHAVKILIVPVALGYLDLASDLYTAVSYYNSGHLFWFVLVVAFALGPAVIVSAFFL---PEFTCGRRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSG-EGGTERFRMCPDCPSVTALVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYSGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVEFV--ACIVTYHLFSSD-HLPPHARWTLTIISICCMVGKMRLALLAIIPLK 532          
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Match: A0A6H5KD04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD04_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 1.470e-45
Identity = 132/373 (35.39%), Postives = 189/373 (50.67%), Query Frame = 1
Query:  571 FQFHVLD-DGQPLPTYSWASVLFPLVVGYVDLGTDVAAVVSYYEAGHAWWFALGMVFIVGPALFAGCVVVRGTDNLVLFG---RCCIVFHLGLLWEAFVSAVTSSYSHTLVTLKLVEALYESTPQLMLQFYVLLLEWGGEGAQWPFWRIFSVVWSGFTLAYTTTGLVVEYPLSQRPPGAEGSTARCPS-LTSKIFSGVPTDGSVEVYGSRW---HPQNFVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISRSIILRH--------------------LRYRSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEGKAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFKRE 1605
            F   VLD +   LPT    +V+  +  GY+DL +D+   VSYYE+G ++WF L + F +GP + A    +  T   V      R  +   L LL EA+ +     ++  L  ++L+EAL+ES PQL+LQ Y  LL W          R+ SV  S  +LAY  T L     L +     EG    C S LT   FS VP  GS  + G  W   HP+  VW  LLY  LEI SR V LA+LALV+R +FFLVL +LW SR  + +                     +  R +++LV MPF+DS+MD   ++ +G  +T VEF++   I + +  ++    P ++R     VA+ CMVGKL L  L + P + +
Sbjct:   49 FNTGVLDAESSRLPT---GTVMLQVFFGYLDLVSDLYTAVSYYESGDSFWFTLVLAFALGPGIIASVFFLTPTIVRVRVPWVRRVLVATQLSLLVEAWRNVAKRRFTPILEVVRLIEALFESVPQLLLQLYAALLLWSSPERN--VLRLGSVCISAGSLAYNATDLFSAKRLERCSDPLEGGICPCCSWLTGLPFSRVPEKGSSRLNG--WGDVHPRTHVWLCLLYHILEIVSRFVPLAMLALVMRKWFFLVLPYLWWSRYAVRKKAAAWTRKSTRETDKARPRKSVTERVRVKLVAMPFLDSVMDGSAAFGLGLVVTLVEFIVCVVIYHLYNHDD---LPTNLRLGLYVVASSCMVGKLLLAALAIFPLRAD 411          
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Match: A0A6H5K7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q2_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 6.620e-42
Identity = 136/389 (34.96%), Postives = 190/389 (48.84%), Query Frame = 1
Query:  517 GEVPKSLRDHPNRKTTVAFQFHVLDDGQPLPT-----YSWASVLFPLVVGYVDLGTDV----AAVVSYYEAGHAWWFALGMVFIVGPALFAGCVVVRGTDNLVLFGRCCIVFHLGLLWEAFVSAVTSSYSHTLVTLKLVEALYESTPQLMLQFYVLLLEWGGEGAQWPFW--RIFSVVWSGFTLAYTTTGLV-VEYPLSQRPPGAEGSTAR------CPSLTSKIFSGVPTDGSVEVYGSR-W-HPQNFVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISRSIILRHLRY--------RSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEGKAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFK 1599
            GE+PK L +HP  K  +  +     DG PLP      ++   ++ P+ +GY+DL +D+        +Y+E      F  G  F+V                            L LL EA  SA + +YS  L  ++++E L+ES PQL+LQ Y +LL W            R+ SV  S  +LAY  T +  VE  L+ R  G EG T R      CP +T  +FS VP  G   + G   W HP+  VW   LY  LEI SR V L ++ALV+R +FFLVL +LWISR +++    Y        R ++R+V MPF+DSI+D  +++  G  LT V+FV  A I  Y   +  G  P   R   T +A  CMVGK+ L  L + P K
Sbjct:   87 GEIPKRLAEHPRFKKFIVGRAM---DGPPLPHINDTGHAVKILIVPVALGYLDLTSDLYTPTTIQATYFE------FTCGRRFLVAT-------------------------QLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSG-EGGTERSRMCPDCPFITGLVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYWGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVKFV--ACIVTYHLFSS-GHLPPHARWTLTIIAICCMVGKMRLALLAILPLK 437          
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Match: A0A6H5JL60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL60_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 9.080e-40
Identity = 110/299 (36.79%), Postives = 157/299 (52.51%), Query Frame = 1
Query:  736 FIVGPALFAGCVVVRGTDNLVLFGRCCIVFHLGLLWEAFVSAVTSSYSHTLVTLKLVEALYESTPQLMLQFYVLLLEWG--GEGAQWPFWRIFSVVWSGFTLAYTTTGLVVEYPLSQRPPGAEGSTAR----CPSLTSKIFSGVPTDGSVEVYG-SRWHPQNFVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISRSIILRHLR----YRSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEGKAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFK 1599
            F +GPA+     V+ G      F R  +   L LL EA+ +     YS  L  +++VE L+ES PQL+LQ Y +L  W      +    WR  SV  S  +LAY  T +     L     G++    R    C SLT  +FS VP  G+  + G    HP++ VW   +Y  LEI +R V LA+L LVVR +F LVL +LW+SR +++R  R    +R  +RLV MPF+DSIMD   ++  G  LT VEF++   I + +  ++    P   R V   VA+ CMVGK+ L ++ + P K
Sbjct:   15 FALGPAVIVALFVLSGVGP---FRRFLVATQLSLLAEAWNTVGGQVYSPVLALVRVVEPLFESVPQLLLQLYAMLRLWPETSSSSSRLAWREVSVCISVASLAYAATDVSSVERLLTCGGGSDCERFRLGPCCSSLTGLVFSRVPAQGTSSLKGVGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVRGWFLLVLVYLWVSRVLMVRVTREGLDFRFGVRLVAMPFLDSIMDETTAFGTGLVLTLVEFILCVVIYHVYKHDD---LPSGARLVLVTVASCCMVGKMCLAWVTISPLK 307          
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Match: A0A6H5JCI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI0_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 3.260e-29
Identity = 105/356 (29.49%), Postives = 170/356 (47.75%), Query Frame = 1
Query:  652 YVDLGTDVAAVVSYYEAGHAWWFALGMVFIVGPALFAGCVVVRGTDNLVLFGRCCIVFHLGLLWEAFVSAVTSSYSHTLVTLKLVEALYESTPQLMLQFYVLLLEWGGEGAQ-----WPFWRIFSVVWS------------GFTLAYTTTGLVVEYPLSQRPPGAEGSTARCP-SLTSKIFSGVPTDGSVEVYG-SRWHPQNFVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISRSIILRHLRY-------------------RSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEGKAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFKRE 1605
            Y+D+GTD+    +Y++ GH  W  LG+V  + P +      + G        R  +V  L +L EAF +A    YS  L  +++VE L+E+   L+LQ + +L+ W  E         PF  +F  V S            G   A T  G V  +      P     T  CP S T   FS  PT G + +    + HPQ  VW   LY  +E+ SR + LA L L+ R +F  VL + W+S++ ++  + +                   R ++R+V MPF+DSI+   +++ VG  LT +EFV++ ++  + Y ++E  + D +  V+T +AA+C++    L  LV+   K+E
Sbjct:   19 YLDIGTDIYTSYTYFQPGHVVWGTLGLVIALLPGIIEALFFLSGVG---FVRRLLVVLQLSVLVEAFSTATGEVYSRKLGFVRVVEPLFEAALHLLLQLHAILVPWNEEPPSPNTFLAPFRSVFISVGSQSYAVTDNSSVEGLKAAATPVGDVSNWCSRCSRPSCCWPTW-CPWSGTRLPFSRAPTKGELNLGCLGKMHPQTQVWVCFLYHIVEVVSRFIPLAFLILLTRPWFIGVLVYFWLSQAALVGWMAWQTDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIISQEEAFVVGLWLTDLEFVVYTTLY-HVYPSDEVASHDQL--VFTIIAAICLL----LARLVMMSLKKE 363          
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.790e-23
Identity = 98/349 (28.08%), Postives = 153/349 (43.84%), Query Frame = 1
Query:  592 DGQPLPT-----YSWASVLFPLVVGYVDLGTDVAAVVSYYEAGHAWWFALGMVFIVGPALFAGCVVVRGTDNLVLFGRCCIVFHLGLLWEAFVSAVTSSYSHTLVTLKLVEALYESTPQLMLQFYVLLLEWGGEGAQWPFWRIFSVVWSGFTLAYTTTGLVVEYPLSQRPPGAEGSTARCPSLTSKIFSGVPTDGSVEVYGSRWHPQNFVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISRSIILR------HLRYRSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEGKAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFKRE 1605
            DG PLP      ++   ++ P+ +GY DL +D+   V Y+   H  W  LG+ F +GPAL      + G      + R  +  HL L++EA+ +     YS  L  +++VE L+ES PQL+LQ Y +L+ W              +VW                            +  C S+ S  ++      SVE              FL  Q  E+ S  VSLA+   V+R +  LVL +LW+SR +I+        L +R ++RLV MPF DSI+D    +      T +EF++  ++ + + +++      S RR  T V   CMVG   +  +   P   E
Sbjct:   46 DGPPLPQVEDDDHAKKILVLPVSLGYPDLVSDIFTAVFYFRGDHPVWGGLGLAFALGPALITSIFFLSGFQ---WYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLILWTETMLSHG-----RLVWRXXXXXXXXXXXXXXXXXXXXXXXXXVGSV-CISVASLAYAATDVS-SVE--------------FLATQTGEV-SYFVSLAMFFTVIRKWSSLVLLYLWMSRGVIVXIWASKTSLDFRFRVRLVAMPFTDSIVDGAVVFRGALVWTLLEFMLCLALYHAYAQDD---LSASARRALTIVVCSCMVGLQTISAMHPPPVSAE 366          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig132.55.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JIQ5_9PHAE5.110e-14360.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJQ6_ECTSI4.500e-7041.11Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A6H5JJ93_9PHAE8.950e-5636.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBY3_ECTSI2.100e-5537.11Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LFI4_ECTSI4.780e-5537.66Leucine Rich Repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5KD04_9PHAE1.470e-4535.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Q2_9PHAE6.620e-4234.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL60_9PHAE9.080e-4036.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCI0_9PHAE3.260e-2929.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6W6_9PHAE1.790e-2328.08HTH psq-type domain-containing protein n=1 Tax=Ect... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig132contigP-littoralis_Contig132:213112..215862 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FJQ6
PFAMsLRRNT_2,LRR_1,LRR_6,LRR_8,XK-related
Model size1605
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue7.38e-71
EggNOG OGsCOG4886@1|root,2R960@2759|Eukaryota
Descriptionregulation of response to stimulus
Cds size1605
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig132.55.1prot_P-littoralis_Contig132.55.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig132 213112..215862 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789604.1601963-CDS-P-littoralis_Contig132:213111..2131871680789604.1601963-CDS-P-littoralis_Contig132:213111..213187Pylaiella littoralis U1_48CDSP-littoralis_Contig132 213112..213187 +
1680789604.1735997-CDS-P-littoralis_Contig132:213267..2134051680789604.1735997-CDS-P-littoralis_Contig132:213267..213405Pylaiella littoralis U1_48CDSP-littoralis_Contig132 213268..213405 +
1680789604.182379-CDS-P-littoralis_Contig132:213743..2138151680789604.182379-CDS-P-littoralis_Contig132:213743..213815Pylaiella littoralis U1_48CDSP-littoralis_Contig132 213744..213815 +
1680789604.1926537-CDS-P-littoralis_Contig132:214194..2142661680789604.1926537-CDS-P-littoralis_Contig132:214194..214266Pylaiella littoralis U1_48CDSP-littoralis_Contig132 214195..214266 +
1680789604.2010415-CDS-P-littoralis_Contig132:214428..2145461680789604.2010415-CDS-P-littoralis_Contig132:214428..214546Pylaiella littoralis U1_48CDSP-littoralis_Contig132 214429..214546 +
1680789604.211703-CDS-P-littoralis_Contig132:214733..2158621680789604.211703-CDS-P-littoralis_Contig132:214733..215862Pylaiella littoralis U1_48CDSP-littoralis_Contig132 214734..215862 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig132.55.1

>prot_P-littoralis_Contig132.55.1 ID=prot_P-littoralis_Contig132.55.1|Name=mRNA_P-littoralis_Contig132.55.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=535bp
LAGTIPPELGNLAALEYLELEENELTGEIILRILSLPAQFALSLPLAGTI
PPELGNLAALEYLRLDGNELSGPIPKELGDLTELVELVLYRNQLTGPIPP
ELGALRELKTLELNKNQLTGTIPPQLGNLAALEYLRLQDNELSGESLGTS
VSRSYVKNEEADRRACVVPLAIGEVPKSLRDHPNRKTTVAFQFHVLDDGQ
PLPTYSWASVLFPLVVGYVDLGTDVAAVVSYYEAGHAWWFALGMVFIVGP
ALFAGCVVVRGTDNLVLFGRCCIVFHLGLLWEAFVSAVTSSYSHTLVTLK
LVEALYESTPQLMLQFYVLLLEWGGEGAQWPFWRIFSVVWSGFTLAYTTT
GLVVEYPLSQRPPGAEGSTARCPSLTSKIFSGVPTDGSVEVYGSRWHPQN
FVWAFLLYQWLEIGSRIVSLALLALVVRAYFFLVLSWLWISRSIILRHLR
YRSQLRLVGMPFMDSIMDALKSYDVGCALTTVEFVIFASISNYFYENEEG
KAPDSVRRVWTYVAAVCMVGKLALGFLVVRPFKRE
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mRNA from alignment at P-littoralis_Contig132:213112..215862+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig132.55.1 ID=mRNA_P-littoralis_Contig132.55.1|Name=mRNA_P-littoralis_Contig132.55.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2751bp|location=Sequence derived from alignment at P-littoralis_Contig132:213112..215862+ (Pylaiella littoralis U1_48)
CTTGCAGGCACCATCCCACCAGAGCTGGGGAACCTCGCAGCACTGGAGTA CCTCGAGCTTGAGGAAAACGAGCTAAGTGGTGAGTCAGAAGGTAACATTT TTAACAATAAATTTTAAGAATGAGTCCTGTCAATGAGTGAGTAGGTGTTC TAGAAGCCGGGGAAATTATACTTCGTATTTTGTCATTGCCCGCTCAATTC GCACTTTCTCTTCCGCTTGCAGGCACCATCCCACCAGAGCTGGGGAACCT CGCAGCACTGGAGTACCTCCGTCTTGACGGAAACGAGCTAAGTGGTGAGT CACTAGGTACAAGTGTTTCCAGATCATATTTCAGGATTCATGGCCGCCAG AAAAAAGCATTGTGAAAACATTGAAGCCTAGATTGAAATGACTCACCGCT CAACGCGTTCCTCCAAAGCTCCAGCCTCAATAGGGCCCCAAGTTGCCCGA GCTCCGGAGGGATAGCCCCTGTGGGAAAAAGAGCAAGTACGAATTAAGCG GGGAAATAAAAAGTATTTCCCCCACCTTCTAGAACACCTACTCACCCATG CGTGAGCGGGACCGATGTTCTAAAACCTTGATCACACACGATTTTCTCAT TTGTTGTTTTACCGCTTTGCTGCTTTGTCCAGGGCCTATACCAAAGGAGC TGGGAGACCTCACCGAGCTGGTGGAGCTTGTGTTGTACAGGAACCAGCTT ACAGGTAACTAACTTTGGGCGAATTTTATGGATGGCGATTCTCGCCTGCT TCTCTAGCATGTATCACGCCTACGCGTAGGCGTGATACATGCTAGAGAAG CAGGCGAGAATCGTCATCCATAAAATTCGCCCAAAGTTAGTTACCTGTAA GATGGTTCCTGTACAACACAAGCTCCACCAGCTCGGTGAGGTCTCCCAGC TCCTTTGGTATAGGCCCTGGACAAAGCAGCAAAGCGGTAAAACAACAAAT GAGAAAATCGTGTGTGATCAAGGTTTTAGAACATCGGTCCCGCTCACGCA CGCATGGGTGAGTAGGTGTTCTAGAAGCCGGGCCATTTATTTATTTTTCC CCGCTAAATTCGTGTTCGCTCTTCCGTTTGCAGGCCCCATTCCACCTGAG CTGGGAGCTCTCAGAGAGCTAAAGACGCTGGAGCTCAACAAAAACCAGCT CACAGGTACCGTTTTTTAATTGTGGCGGTCGTTTTACATGATTTTCGAAC TGATTTAATGGATGAACCCCGCCTATGCATCGCAAGTAGGTGTTCTAGAA GCCGGAGAAATTATACTTCGTATTTTGCTATTGCCCGCTGAATTCGCATT TTCTCTTCCGCTTGCAGGCACCATTCCACCACAGCTGGGGAACCTCGCAG CACTGGAGTACCTCAGGCTTCAGGATAACGAGCTAAGTGGTGAGTCGCTA GGTACAAGTGTTTCCCGATCATATGTCAAGAATGAGTCCTGCCAATGCGG TTGGCGTCCACTCACGGAGTAGGGTTGGCGTCCACGCAGCACAGCATTAA TCCACACCATCATCAATTGACAATTTTTGAAACCGCCAAAAACACTGCAA AAACTTGAAGTCGTACCTAGGTACAGTGTGCACCTGTGCGTTGGATACTT GCTCGCCTTGAATGCTTGCGAGGGAAGCTGACCGCCGCGCGTGTGTCGTA CCTCTTGCGATAGGTGAAGTGCCGAAGTCTCTTCGTGACCACCCGAACCG GAAAACGACGGTCGCATTTCAATTCCATGTGTTGGATGATGGGCAACCCT TACCAACTTATTCCTGGGCGAGCGTCCTTTTCCCGTTGGTTGTGGGTTAC GTGGACCTAGGTACGGATGTGGCCGCGGTTGTTTCCTACTATGAAGCAGG CCACGCGTGGTGGTTTGCGTTGGGAATGGTATTTATTGTCGGGCCCGCTT TGTTCGCTGGGTGTGTAGTGGTTCGCGGGACGGACAACCTCGTCCTTTTC GGTCGATGCTGTATCGTTTTCCATCTGGGGCTGTTGTGGGAGGCTTTCGT TTCAGCAGTGACGTCGTCGTACTCCCACACGCTGGTGACTTTGAAGCTCG TGGAGGCGCTCTATGAGTCAACACCACAGCTGATGCTACAATTTTATGTC CTTTTGCTCGAGTGGGGTGGCGAGGGGGCCCAATGGCCATTCTGGAGGAT TTTCTCCGTCGTGTGGTCCGGCTTTACTCTGGCCTACACCACCACAGGTT TGGTAGTAGAGTATCCTTTGTCTCAACGGCCCCCGGGTGCAGAAGGTTCG ACTGCACGGTGTCCTTCACTCACGAGCAAGATTTTTAGCGGCGTCCCCAC AGATGGCAGTGTTGAAGTGTATGGATCAAGGTGGCACCCCCAGAACTTTG TTTGGGCGTTTTTGCTGTACCAGTGGCTTGAGATTGGATCTAGGATCGTT TCACTCGCTCTCTTGGCACTGGTGGTTCGGGCGTACTTTTTCCTGGTGTT GTCGTGGCTGTGGATTTCTCGGTCAATTATTCTACGTCATTTACGTTATC GATCGCAGCTTCGTTTGGTGGGTATGCCGTTCATGGACTCCATCATGGAT GCATTGAAGTCGTACGACGTCGGTTGTGCGCTCACGACGGTGGAATTTGT GATTTTTGCGTCGATTAGTAACTATTTCTACGAGAACGAGGAGGGTAAAG CGCCCGATAGTGTTCGACGTGTGTGGACTTACGTCGCTGCGGTGTGTATG GTGGGGAAATTGGCTCTGGGGTTTCTGGTCGTGAGGCCATTCAAGAGAGA G
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Coding sequence (CDS) from alignment at P-littoralis_Contig132:213112..215862+

>mRNA_P-littoralis_Contig132.55.1 ID=mRNA_P-littoralis_Contig132.55.1|Name=mRNA_P-littoralis_Contig132.55.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1605bp|location=Sequence derived from alignment at P-littoralis_Contig132:213112..215862+ (Pylaiella littoralis U1_48)
CTTGCAGGCACCATCCCACCAGAGCTGGGGAACCTCGCAGCACTGGAGTA
CCTCGAGCTTGAGGAAAACGAGCTAACCGGGGAAATTATACTTCGTATTT
TGTCATTGCCCGCTCAATTCGCACTTTCTCTTCCGCTTGCAGGCACCATC
CCACCAGAGCTGGGGAACCTCGCAGCACTGGAGTACCTCCGTCTTGACGG
AAACGAGCTAAGTGGGCCTATACCAAAGGAGCTGGGAGACCTCACCGAGC
TGGTGGAGCTTGTGTTGTACAGGAACCAGCTTACAGGCCCCATTCCACCT
GAGCTGGGAGCTCTCAGAGAGCTAAAGACGCTGGAGCTCAACAAAAACCA
GCTCACAGGCACCATTCCACCACAGCTGGGGAACCTCGCAGCACTGGAGT
ACCTCAGGCTTCAGGATAACGAGCTAAGTGGTGAGTCGCTAGGTACAAGT
GTTTCCCGATCATATGTCAAGAATGAGGAAGCTGACCGCCGCGCGTGTGT
CGTACCTCTTGCGATAGGTGAAGTGCCGAAGTCTCTTCGTGACCACCCGA
ACCGGAAAACGACGGTCGCATTTCAATTCCATGTGTTGGATGATGGGCAA
CCCTTACCAACTTATTCCTGGGCGAGCGTCCTTTTCCCGTTGGTTGTGGG
TTACGTGGACCTAGGTACGGATGTGGCCGCGGTTGTTTCCTACTATGAAG
CAGGCCACGCGTGGTGGTTTGCGTTGGGAATGGTATTTATTGTCGGGCCC
GCTTTGTTCGCTGGGTGTGTAGTGGTTCGCGGGACGGACAACCTCGTCCT
TTTCGGTCGATGCTGTATCGTTTTCCATCTGGGGCTGTTGTGGGAGGCTT
TCGTTTCAGCAGTGACGTCGTCGTACTCCCACACGCTGGTGACTTTGAAG
CTCGTGGAGGCGCTCTATGAGTCAACACCACAGCTGATGCTACAATTTTA
TGTCCTTTTGCTCGAGTGGGGTGGCGAGGGGGCCCAATGGCCATTCTGGA
GGATTTTCTCCGTCGTGTGGTCCGGCTTTACTCTGGCCTACACCACCACA
GGTTTGGTAGTAGAGTATCCTTTGTCTCAACGGCCCCCGGGTGCAGAAGG
TTCGACTGCACGGTGTCCTTCACTCACGAGCAAGATTTTTAGCGGCGTCC
CCACAGATGGCAGTGTTGAAGTGTATGGATCAAGGTGGCACCCCCAGAAC
TTTGTTTGGGCGTTTTTGCTGTACCAGTGGCTTGAGATTGGATCTAGGAT
CGTTTCACTCGCTCTCTTGGCACTGGTGGTTCGGGCGTACTTTTTCCTGG
TGTTGTCGTGGCTGTGGATTTCTCGGTCAATTATTCTACGTCATTTACGT
TATCGATCGCAGCTTCGTTTGGTGGGTATGCCGTTCATGGACTCCATCAT
GGATGCATTGAAGTCGTACGACGTCGGTTGTGCGCTCACGACGGTGGAAT
TTGTGATTTTTGCGTCGATTAGTAACTATTTCTACGAGAACGAGGAGGGT
AAAGCGCCCGATAGTGTTCGACGTGTGTGGACTTACGTCGCTGCGGTGTG
TATGGTGGGGAAATTGGCTCTGGGGTTTCTGGTCGTGAGGCCATTCAAGA
GAGAG
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