mRNA_P-littoralis_Contig131.70.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Match: D8LPT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT4_ECTSI) HSP 1 Score: 393 bits (1009), Expect = 1.340e-132 Identity = 201/230 (87.39%), Postives = 215/230 (93.48%), Query Frame = 2
Query: 305 RVLRLVGGVDISFVKGSEENACATLVVLQFPSLKTVYEAYERVTMDYPYMSGFLAFREVNHLARLVGQLRRERPDLEPDVTFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLHVDGLTKAGVRERVKALLSVGEREMPLLGASGTVWGMALVPKEEEGKKAA-VVSSPVFVSVGHRVSLETCVALTKAVGRYRVPEPVRQADMRSREVIREWLLERRGD-EADTKQ 988
R+LRLVGGVDISFVKGSEENACA+LVVL+FPSL+TVYEAYERVTM++PY+SGFLAFREV+HLARLVGQLRRERPDLEPDV FVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFL VDGLTK GVRERVKALLS GERE PLLG SGTVWG A VPKEEEGKK VV+SPVFVS+GHRVSLETCVALTKAV R+RVPEP+RQADMRSREVIREWLLERRG E +TK+
Sbjct: 4 RLLRLVGGVDISFVKGSEENACASLVVLEFPSLQTVYEAYERVTMNHPYISGFLAFREVDHLARLVGQLRRERPDLEPDVVFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLQVDGLTKVGVRERVKALLSAGERETPLLGTSGTVWGTAFVPKEEEGKKGGGVVTSPVFVSIGHRVSLETCVALTKAVCRFRVPEPIRQADMRSREVIREWLLERRGKAEGETKE 233
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Match: A0A6H5L317_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L317_9PHAE) HSP 1 Score: 395 bits (1016), Expect = 3.510e-132 Identity = 231/335 (68.96%), Postives = 247/335 (73.73%), Query Frame = 2
Query: 65 LEGRWMGEQATIAEAVIDTDDVTWNIDTD--------------------HTAPXXXXXXXXXXXXXXXXXXXXTPDQSCCVETNSSEDGTSPCPPMPIARRVLRLVGGVDISFVKGSEENACATLVVLQFPSLKTVYEAYERVTMDYPYMSGFLAFREVNHLARLVGQLRRERPDLEPDVTFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLHVDGLTKAGVRERVKALLSVGEREMPLLGASGTVWGMALVPKEEEGKKAA-VVSSPVFVSVGHRVSLETCVALTKAVGRYRVPEPVRQADMRSREVIREWLLERRGD-EADTKQTSSPS 1003
LE RW+ EQ IA AV+DTDDV W +D T P XXXXXXXXXXX R+LRLVGGVDISFVKGSEENACA+LVVL FPSLKTVYEAYERVTM++PY+SGFLAFREV+HLARLVGQLRRERPDLEPDV FVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFL VDGLTK VRER K LLS G+RE PLLG SGTVWG ALVPKEEEGKK VV+SPVFVS+GHRVSLETCVALTKAV R+RVPEP+RQADMRSREVIREWLLERRG E +TK+ PS
Sbjct: 6 LEERWLEEQTRIARAVVDTDDVLWTLDQPPERNAATARRPTPPPQHGQTQTEPKEMSSAAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTSATPGRLLRLVGGVDISFVKGSEENACASLVVLDFPSLKTVYEAYERVTMNHPYISGFLAFREVDHLARLVGQLRRERPDLEPDVVFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLQVDGLTKVDVRERAKVLLSAGKRETPLLGTSGTVWGTALVPKEEEGKKGGGVVTSPVFVSIGHRVSLETCVALTKAVCRFRVPEPIRQADMRSREVIREWLLERRGKAEGETKKAEGPS 340
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Match: A0A835YW13_9STRA (Endonuclease V-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW13_9STRA) HSP 1 Score: 258 bits (660), Expect = 1.170e-79 Identity = 135/215 (62.79%), Postives = 159/215 (73.95%), Query Frame = 2
Query: 305 RVLRLVGGVDISFVKGSEENACATLVVLQFPSLKTVYEAYERVTMDYPYMSGFLAFREVNHLARLVGQLRRERPDLEPDVTFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLHVDGLTKAGVRERVKALLSVGEREMPLLGASGTVWGMALVPKEEEGKKAAVVSSPVFVSVGHRVSLETCVALTKAVGRYRVPEPVRQADMRSREVIREW 949
R LR VGGVDISF K S +NACA+LVVL FP L V++ + RVTM PY+SGFLAFREV H+A LV +LR ERPDL PDV FVDGNG LHPRGAGLA HLGV+ LRT+G+GKTFLH+DGLT+ GVR AL E L G SGTVWG AL + V++P+FVSVGHRV+L+T VALT+A YR+PEPVRQAD+ SR ++REW
Sbjct: 47 RPLRYVGGVDISFTKNSSDNACASLVVLSFPELIVVHQLHARVTMTLPYISGFLAFREVEHIAALVERLRAERPDLLPDVVFVDGNGVLHPRGAGLASHLGVLCNLRTIGIGKTFLHIDGLTRDGVRAACGALPPEARGEYELRGDSGTVWGRALCFNDS-------VTAPIFVSVGHRVALQTAVALTRACCLYRMPEPVRQADILSRALVREW 254
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Match: W2YQG1_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=W2YQG1_PHYPR) HSP 1 Score: 239 bits (611), Expect = 2.850e-72 Identity = 135/297 (45.45%), Postives = 178/297 (59.93%), Query Frame = 2
Query: 59 AVLEGRWMGEQATIAEAVIDTDDVTWNIDTDHTAPXXXXXXXXXXXXXXXXXXXXTPDQSCCVETNSSEDGTSPCPPMPIARRVLRLVGGVDISFVKGSEENACATLVVLQFPSLKTVYEAYERVTMDYPYMSGFLAFREVNHLARLVGQLRRERPDLEPDVTFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLHVDGLTKAGVRERVKALLSVGEREMPLLGASGTVWGMALVPKEEEGKKAAVVSSPVFVSVGHRVSLETCVALTKAVGRYRVPEPVRQADMRSREVIREW 949
AV +W EQ + + +++TD V W + +D + + D TS C ++LR V GVDISF+KGS+E+ACA++VVL FPSL +YEA+ V++ PY++GFLAFREV L +L LRR RPDL PDVT VDGNG LHP+G GLA H GV+ + T+G+GKTFLHVDGLTK V+ + + L G SG +WG AL A V +PV+VSVGH +SL+T VA+ +A +YRVPEP+RQAD+RSREVIR+W
Sbjct: 9 AVTREQWKTEQLELKQQLMETDVVLWQLQSD-------------------------------TDCATPSDETSSC-------KLLRRVAGVDISFLKGSDEHACASIVVLDFPSLTVLYEAFTYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGILHPQGFGLASHFGVLENIPTIGVGKTFLHVDGLTKPDVKGLMAKAREEDRDLVKLTGKSGKIWGAALCG-------TAGVKNPVYVSVGHMLSLDTSVAIAQACSQYRVPEPIRQADLRSREVIRKW 260
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Match: A0A6A3ZRE1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZRE1_9STRA) HSP 1 Score: 236 bits (602), Expect = 4.420e-71 Identity = 122/215 (56.74%), Postives = 155/215 (72.09%), Query Frame = 2
Query: 305 RVLRLVGGVDISFVKGSEENACATLVVLQFPSLKTVYEAYERVTMDYPYMSGFLAFREVNHLARLVGQLRRERPDLEPDVTFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLHVDGLTKAGVRERVKALLSVGEREMPLLGASGTVWGMALVPKEEEGKKAAVVSSPVFVSVGHRVSLETCVALTKAVGRYRVPEPVRQADMRSREVIREW 949
+VL+ V GVDISF+KGS E+ACA++VVL++PSL +YEA+ V++ PY++GFLAFREV L +L LRR RPDL PDVT VDGNG LHP+G GLA H GV+ + TVG+GKTFLHVDGLTKA V+ + + L G SG VWG AL A V +PV+VSVGH +SL++ VA+ +A +YRVPEP+RQAD+RSREVIR+W
Sbjct: 42 KVLKRVAGVDISFLKGSSEHACASIVVLEYPSLSVLYEAFAYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGVLHPQGFGLASHFGVLESVPTVGVGKTFLHVDGLTKADVKRLMARAREENHDLVKLAGKSGKVWGAALCG-------TAGVKNPVYVSVGHMLSLDSSVAIAQACSQYRVPEPIRQADLRSREVIRQW 249
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Match: K3WTZ8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTZ8_GLOUD) HSP 1 Score: 233 bits (594), Expect = 1.060e-69 Identity = 124/219 (56.62%), Postives = 156/219 (71.23%), Query Frame = 2
Query: 299 ARRVLRL--VGGVDISFVKGSEENACATLVVLQFPSLKTVYEAYERVTMDYPYMSGFLAFREVNHLARLVGQLRRERPDLEPDVTFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLHVDGLTKAGVRERVKALLSVGEREMPLLGASGTVWGMALVPKEEEGKKAAVVSSPVFVSVGHRVSLETCVALTKAVGRYRVPEPVRQADMRSREVIREW 949
AR V RL V GVDISF+KGS E+ACA++VVLQ+PSL+ VYEA+ V++ PY+ GFLAFREV L RL L P PD+T VDGNG LHP+G GLA H GV+ + T+G+GKTFLHVDGLTK VR++V A + E+ + L G S VWG AL +AA V +PVFVSVGH+VSL++ + + KA RYR+PEP+RQAD+RSR+VIR W
Sbjct: 48 ARPVKRLERVAGVDISFLKGSNEHACASIVVLQYPSLRVVYEAFTYVSLPAPYIPGFLAFREVPALTRLYEDLVARCPQYVPDITLVDGNGILHPQGFGLASHFGVLMDVPTIGVGKTFLHVDGLTKGDVRQQVAAAKTKHEQVVELQGESSKVWGAALC------NQAAGVENPVFVSVGHKVSLDSSLRIVKACSRYRIPEPIRQADLRSRQVIRSW 260
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Match: A0A2P4YA30_9STRA (DNA repair endonuclease (Predicted) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YA30_9STRA) HSP 1 Score: 228 bits (582), Expect = 3.940e-68 Identity = 134/297 (45.12%), Postives = 173/297 (58.25%), Query Frame = 2
Query: 59 AVLEGRWMGEQATIAEAVIDTDDVTWNIDTDHTAPXXXXXXXXXXXXXXXXXXXXTPDQSCCVETNSSEDGTSPCPPMPIARRVLRLVGGVDISFVKGSEENACATLVVLQFPSLKTVYEAYERVTMDYPYMSGFLAFREVNHLARLVGQLRRERPDLEPDVTFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLHVDGLTKAGVRERVKALLSVGEREMPLLGASGTVWGMALVPKEEEGKKAAVVSSPVFVSVGHRVSLETCVALTKAVGRYRVPEPVRQADMRSREVIREW 949
A L +W EQ + + +I+TD V W + D TP ETN+ + L V GVDISF+KGS+E+ACA++VVL F S +YEA+ V++ PY++GFLAFREV L +L LRR RPDL PDVT VDGNG LHP+G GLA H GV+ + T+G+GKTFLHVDGLTK V+ + + L G SG VWG AL A V +PV+VSVGH +SL+T VA+ +A +YR+PEP+RQAD+RSREVIR+W
Sbjct: 2 ATLHEQWKTEQLELKQRLIETDVVQWQLHPDAVGA--------------------TPID----ETNNG--------------KALNRVAGVDISFLKGSDEHACASIVVLDFLSQTVLYEAFTYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGVLHPQGFGLASHFGVLENIPTIGVGKTFLHVDGLTKPDVKGLMAKAREENHDLVKLTGKSGKVWGAALCG-------TAGVKNPVYVSVGHMLSLDTSVAIAQACSQYRIPEPIRQADLRSREVIRQW 253
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Match: A0A0W8B4S8_PHYNI (DnaJ subfamily A member 1 n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8B4S8_PHYNI) HSP 1 Score: 239 bits (610), Expect = 7.630e-68 Identity = 135/297 (45.45%), Postives = 178/297 (59.93%), Query Frame = 2
Query: 59 AVLEGRWMGEQATIAEAVIDTDDVTWNIDTDHTAPXXXXXXXXXXXXXXXXXXXXTPDQSCCVETNSSEDGTSPCPPMPIARRVLRLVGGVDISFVKGSEENACATLVVLQFPSLKTVYEAYERVTMDYPYMSGFLAFREVNHLARLVGQLRRERPDLEPDVTFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLHVDGLTKAGVRERVKALLSVGEREMPLLGASGTVWGMALVPKEEEGKKAAVVSSPVFVSVGHRVSLETCVALTKAVGRYRVPEPVRQADMRSREVIREW 949
AV +W EQ + + +++TD V W + +D + + D TS C ++LR V GVDISF+KGS+E+ACA++VVL FPSL +YEA+ V++ PY++GFLAFREV L +L LRR RPDL PDVT VDGNG LHP+G GLA H GV+ + T+G+GKTFLHVDGLTK V+ + + L G SG +WG AL A V +PV+VSVGH +SL+T VA+ +A +YRVPEP+RQAD+RSREVIR+W
Sbjct: 396 AVTREQWETEQLELKQQLMETDVVLWQLQSD-------------------------------TDCATPSDETSSC-------KLLRRVAGVDISFLKGSDEHACASIVVLDFPSLTVLYEAFTYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGILHPQGFGLASHFGVLENIPTIGVGKTFLHVDGLTKPDVKGLMAKAREEDRDLVKLTGKSGKIWGAALCG-------TAGVKNPVYVSVGHMLSLDTSVAIAQACSQYRVPEPIRQADLRSREVIRKW 647
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Match: A0A5D6Y5E5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5E5_9STRA) HSP 1 Score: 229 bits (583), Expect = 7.770e-68 Identity = 122/224 (54.46%), Postives = 153/224 (68.30%), Query Frame = 2
Query: 305 RVLRLVGGVDISFVKGSEENACATLVVLQFPSLKTVYEAYERVTMDYPYMSGFLAFREVNHLARLVGQLRRERPDLEPDVTFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLHVDGLTKAGVRERVKALLSVGEREMPLLGASGTVWGMALVPKEEEGKKAAVVSSPVFVSVGHRVSLETCVALTKAVGRYRVPEPVRQADMRSREVIREWLLERRGDEA 976
R +R + GVDISF+KGS E+ACA++VVL FPSL+ +YEA+ V + PY++GFLAFREV L +L L P L PD+T VDGNG LHPRG GLA H GV+ G+ T+G+GKTFLHVDGLTK V+ R+ G + L GASG VWG AL E V +PVFVSVGH +SL+T +A+ A +YRVPEP+RQAD+RSR V++EW R D A
Sbjct: 63 RHVRRLAGVDISFLKGSNEHACASIVVLDFPSLRVLYEAFTYVCLPAPYIAGFLAFREVPALTKLYEDLLARCPALVPDITLVDGNGVLHPRGFGLASHFGVLMGIPTIGVGKTFLHVDGLTKGDVKARMLQAQRDGAQVAQLEGASGRVWGAALCSAEG-------VQNPVFVSVGHLLSLDTSLAVVDACSQYRVPEPIRQADLRSRRVVKEWETSGRVDTA 279
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Match: G4YN11_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YN11_PHYSP) HSP 1 Score: 236 bits (601), Expect = 1.120e-66 Identity = 121/216 (56.02%), Postives = 155/216 (71.76%), Query Frame = 2
Query: 302 RRVLRLVGGVDISFVKGSEENACATLVVLQFPSLKTVYEAYERVTMDYPYMSGFLAFREVNHLARLVGQLRRERPDLEPDVTFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLHVDGLTKAGVRERVKALLSVGEREMPLLGASGTVWGMALVPKEEEGKKAAVVSSPVFVSVGHRVSLETCVALTKAVGRYRVPEPVRQADMRSREVIREW 949
R+ L+ V GVDISF+KGS E+ACA++VVL++PSL +YEA+ V++ PY++GFLAFREV L +L LRR RPDL PDVT VDGNG LHP+G GLA H GV+ G+ T+G+GKTFLHVDGLTK V+ + + L G SG VWG AL A V +PV+VSVGH +SL++ VA+ +A +YRVPEP+RQAD+RSREVIR+W
Sbjct: 423 RKALKRVAGVDISFLKGSNEHACASIVVLEYPSLSVLYEAFTYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGVLHPQGFGLASHFGVLAGIPTIGVGKTFLHVDGLTKLDVKGLMARAREEHHDLVKLAGKSGKVWGAALCG-------TAGVKNPVYVSVGHMLSLDSSVAIAQACSQYRVPEPIRQADLRSREVIRQW 631 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig131.70.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig131.70.3 >prot_P-littoralis_Contig131.70.3 ID=prot_P-littoralis_Contig131.70.3|Name=mRNA_P-littoralis_Contig131.70.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=347bp MLEEGKRHEKAVLEGRWMGEQATIAEAVIDTDDVTWNIDTDHTAPPPPPPback to top mRNA from alignment at P-littoralis_Contig131:327452..338149- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig131.70.3 ID=mRNA_P-littoralis_Contig131.70.3|Name=mRNA_P-littoralis_Contig131.70.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=10698bp|location=Sequence derived from alignment at P-littoralis_Contig131:327452..338149- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig131:327452..338149- >mRNA_P-littoralis_Contig131.70.3 ID=mRNA_P-littoralis_Contig131.70.3|Name=mRNA_P-littoralis_Contig131.70.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1041bp|location=Sequence derived from alignment at P-littoralis_Contig131:327452..338149- (Pylaiella littoralis U1_48)back to top |